Carg03827 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03827
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent tryptophan/phenylalanine/tyrosine adenylase
Location	Cucurbita_argyrosperma_scaffold_011 : 224568 .. 225311 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATAAAGAACAAAGGTAAAGTCCATCCATCTCCATCTTCTTCTTCTTCGTCTTCTTCCGATGGGGACTTCTTTGATGTCTTCAACTATCTTCCGGCGGCGATTTTGGCTCTGCTCACGGTTCTGACCATCGACGATCGAGAGGTTTTGGCTTTCATGATGAGAAGATCCATGGAGACGTCAACGCCGTCCTCTTCCCTATCGGAAAATAAATTTTCCAAGAGAGGTTCGAAGAAATCCGGTGCTCCACGAGCCAATTCGGGTAGCGTGTGTGTTCACGCGCCGCCGTCTCTTAGTTGCTTTGACTGTTATATGAGTTACTGGAACCGATGGAACTCGTCGCCGAACGGCGAGCTAATTCATCAGGCCATTGAGGCTTTCGAAGAGCAATTGGCCAACGGAGAAAAATCCGGCAAGAACATCAAAGGCAAGAGGAAGGACAAAATCGGCCGCCGATCATCGGAGAAGCCTGTCGATGTTTCTCCTCTGTCGCCGCTGCCGTTGCCTGAAGTTCTTCCGTTGGCGATTGATGACGGTTCTGTGGCTCCAGCGACATCTGTGAGTGGCGGTGTTGAAGCGGCAGAGGGAAGCGGAGAACTGCCACGGACTGAGGCGCGGGCTGCGATGGTGGTTGTCCCTTCGTCGCCGCCGAGCAACCACAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTGTTAGGGTTATTTAATTCTCGTCTATGGAGTCTTTGGGGTCCAAATTAG

mRNA sequence

ATGAAAATAAAGAACAAAGGTAAAGTCCATCCATCTCCATCTTCTTCTTCTTCGTCTTCTTCCGATGGGGACTTCTTTGATGTCTTCAACTATCTTCCGGCGGCGATTTTGGCTCTGCTCACGGTTCTGACCATCGACGATCGAGAGGTTTTGGCTTTCATGATGAGAAGATCCATGGAGACGTCAACGCCGTCCTCTTCCCTATCGGAAAATAAATTTTCCAAGAGAGGTTCGAAGAAATCCGGTGCTCCACGAGCCAATTCGGGTAGCGTGTGTGTTCACGCGCCGCCGTCTCTTAGTTGCTTTGACTGTTATATGAGTTACTGGAACCGATGGAACTCGTCGCCGAACGGCGAGCTAATTCATCAGGCCATTGAGGCTTTCGAAGAGCAATTGGCCAACGGAGAAAAATCCGGCAAGAACATCAAAGGCAAGAGGAAGGACAAAATCGGCCGCCGATCATCGGAGAAGCCTGTCGATGTTTCTCCTCTGTCGCCGCTGCCGTTGCCTGAAGTTCTTCCGTTGGCGATTGATGACGGTTCTGTGGCTCCAGCGACATCTGTGAGTGGCGGTGTTGAAGCGGCAGAGGGAAGCGGAGAACTGCCACGGACTGAGGCGCGGGCTGCGATGGTGGTTGTCCCTTCGTCGCCGCCGAGCAACCACAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTGTTAGGGTTATTTAATTCTCGTCTATGGAGTCTTTGGGGTCCAAATTAG

Coding sequence (CDS)

ATGAAAATAAAGAACAAAGGTAAAGTCCATCCATCTCCATCTTCTTCTTCTTCGTCTTCTTCCGATGGGGACTTCTTTGATGTCTTCAACTATCTTCCGGCGGCGATTTTGGCTCTGCTCACGGTTCTGACCATCGACGATCGAGAGGTTTTGGCTTTCATGATGAGAAGATCCATGGAGACGTCAACGCCGTCCTCTTCCCTATCGGAAAATAAATTTTCCAAGAGAGGTTCGAAGAAATCCGGTGCTCCACGAGCCAATTCGGGTAGCGTGTGTGTTCACGCGCCGCCGTCTCTTAGTTGCTTTGACTGTTATATGAGTTACTGGAACCGATGGAACTCGTCGCCGAACGGCGAGCTAATTCATCAGGCCATTGAGGCTTTCGAAGAGCAATTGGCCAACGGAGAAAAATCCGGCAAGAACATCAAAGGCAAGAGGAAGGACAAAATCGGCCGCCGATCATCGGAGAAGCCTGTCGATGTTTCTCCTCTGTCGCCGCTGCCGTTGCCTGAAGTTCTTCCGTTGGCGATTGATGACGGTTCTGTGGCTCCAGCGACATCTGTGAGTGGCGGTGTTGAAGCGGCAGAGGGAAGCGGAGAACTGCCACGGACTGAGGCGCGGGCTGCGATGGTGGTTGTCCCTTCGTCGCCGCCGAGCAACCACAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTGTTAGGGTTATTTAATTCTCGTCTATGGAGTCTTTGGGGTCCAAATTAG

Protein sequence

MKIKNKGKVHPSPSSSSSSSSDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGKNIKGKRKDKIGRRSSEKPVDVSPLSPLPLPEVLPLAIDDGSVAPATSVSGGVEAAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN

Homology

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BLAST of Carg03827 vs. NCBI nr
Match: XP_022960393.1 (uncharacterized protein LOC111461129 [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 231/247 (93.52%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 1   MKIKNXXXXXXXXXXXXXXXXXXXFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSME 60
           MKIKN        XXXXXXXXXX FFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSME
Sbjct: 1   MKIKNKGKVHPSPXXXXXXXXXXDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSME 60

Query: 61  TSTPSSSLSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGEL 120
           TSTPS    ENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGEL
Sbjct: 61  TSTPSXXXXENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGEL 120

Query: 121 IHQAIEAFEEQLANGEKSGKNIKGKRKDKIGRRSSEKPVDVSPLSPLPLPEVLPLAIDDG 180
           IHQAIEAFEEQLANGEKSGKNIK KRKDKIGRRSSEKPVDV+PLSP PLPEVLPLAIDDG
Sbjct: 121 IHQAIEAFEEQLANGEKSGKNIKCKRKDKIGRRSSEKPVDVAPLSPPPLPEVLPLAIDDG 180

Query: 181 SVAPATSVSGGVEAAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRL 240
           SVAPATSVSGGVEAAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRL
Sbjct: 181 SVAPATSVSGGVEAAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRL 240

Query: 241 WSLWGPN 248
           WSLWGPN
Sbjct: 241 WSLWGPN 247

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BLAST of Carg03827 vs. NCBI nr
Match: XP_023514611.1 (uncharacterized protein LOC111778855 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 54  MMRRSMETSTPSSSLSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWN 113
           MMRRSMETSTPSSSLSENKFSKRGSKKSG+PRANSGSVCVHAPPSLSCFDCYMSYWNRWN
Sbjct: 1   MMRRSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSCFDCYMSYWNRWN 60

Query: 114 SSPNGELIHQAIEAFEEQLANGEKSGKNIKGKRKDKIGRRSSEKPVDVSPLSPLPLPEVL 173
           SSPNGELIHQAIEAFEEQLANGEKS KN+KGKRKDKIGRRSSEKPVDV+PLSP PLPEVL
Sbjct: 61  SSPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVDVAPLSPPPLPEVL 120

Query: 174 PLAIDDGSVAPATSVSGGVEAAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVL 233
           PLA+DDGSVAPATSVSGGVEA EGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVL
Sbjct: 121 PLAMDDGSVAPATSVSGGVEATEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVL 180

Query: 234 GLFNSRLWSLWGPN 248
           GLFNSRLWSLWGPN
Sbjct: 181 GLFNSRLWSLWGPN 194

[Close]

BLAST of Carg03827 vs. NCBI nr
Match: XP_023004896.1 (uncharacterized protein LOC111498074 [Cucurbita maxima])

HSP 1 Score: 365.2 bits (936), Expect = 1.8e-97
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 59  METSTPSSSLSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNG 118
           METSTPSSSLSENKFSKRGSKKSGAP+ANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNG
Sbjct: 1   METSTPSSSLSENKFSKRGSKKSGAPQANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNG 60

Query: 119 ELIHQAIEAFEEQLANGEKSGKNIKGKRKDKIGRRSSEKPVDVSPLSPLPLPEVLPLAID 178
           ELIHQAIEAFEEQLANGEKSGKN+KGKRKDKIGRRSSEK VDV+PLSP PLPEVLPLAID
Sbjct: 61  ELIHQAIEAFEEQLANGEKSGKNVKGKRKDKIGRRSSEKAVDVAPLSPPPLPEVLPLAID 120

Query: 179 DGSVAPATSVSGGVEAAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNS 238
           DGSVAPATSVSGGVEA EGSGELPRTEARAA+VVVPSSPPSNHKGLARKVWPDVLGLFNS
Sbjct: 121 DGSVAPATSVSGGVEATEGSGELPRTEARAALVVVPSSPPSNHKGLARKVWPDVLGLFNS 180

Query: 239 RLWSLWGPN 248
           RLWSLWGPN
Sbjct: 181 RLWSLWGPN 189

[Close]

BLAST of Carg03827 vs. NCBI nr
Match: XP_022991379.1 (uncharacterized protein LOC111488030 [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 3.8e-87
Identity = 173/223 (77.58%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 25  FFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGAP 84
           FF+VFNYLP AILAL++VLT DDREVLAFMMRRSMETS+ SS +S NKFSKR  KKS AP
Sbjct: 22  FFEVFNYLPVAILALISVLTADDREVLAFMMRRSMETSSTSSVVSGNKFSKRAPKKSTAP 81

Query: 85  RANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGKNIKG 144
           RA+SGS CVH+PPS +CFDCYMSYW+RWNSSPNGELIHQAIEAFEEQLANGEKS KN+KG
Sbjct: 82  RASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNGELIHQAIEAFEEQLANGEKSCKNVKG 141

Query: 145 KRKDKIGRRSSEKPVDVSPLSPLPLPEVLPLAIDDG-SVAPATSVSGGVEAAEGSGELPR 204
           K+++KIGR+SS+KPV+V  ++P PLPEVLPL ID+G S AP TS S  VEAAEG GE  R
Sbjct: 142 KKREKIGRQSSDKPVNV--VAP-PLPEVLPLPIDEGSSAAPTTSGSDEVEAAEGRGEPSR 201

Query: 205 TEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGP 247
           TE   A+V+VPS PPSN KGLARKVWPDVLGLFNSRLWSLWGP
Sbjct: 202 TEDETAVVIVPSPPPSNRKGLARKVWPDVLGLFNSRLWSLWGP 241

[Close]

BLAST of Carg03827 vs. NCBI nr
Match: XP_022953880.1 (uncharacterized protein LOC111456285 [Cucurbita moschata])

HSP 1 Score: 329.7 bits (844), Expect = 8.4e-87
Identity = 168/224 (75.00%), Postives = 192/224 (85.71%), Query Frame = 0


Query: 25  FFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGAP 84
           FF+VFNYLP A+LAL+++LT+DDREVLAFMMRRSMETS+ SS +S NKFSKR  KKS AP
Sbjct: 26  FFEVFNYLPVAMLALISLLTVDDREVLAFMMRRSMETSSTSSFVSGNKFSKRAPKKSTAP 85

Query: 85  RANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGKNIKG 144
           RA+SGS CVH+PPS +CFDCYMSYW+RWNSSPNGELIHQAIEAFEEQLANGEKS KN+KG
Sbjct: 86  RASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNGELIHQAIEAFEEQLANGEKSSKNVKG 145

Query: 145 KRKDKIGRRSSEKPVDVSPLSPLPLPEVLPLAIDDG-SVAPATSVSGGVEAAEGSGELPR 204
           K+++KIGR+SS+KPV+V      PLP VLPL ID+G S AP TS S  VEAAEG GE  R
Sbjct: 146 KKREKIGRQSSDKPVNVVAPPLPPLPGVLPLPIDEGSSAAPTTSGSDDVEAAEGKGEPSR 205

Query: 205 TEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 248
           TE   A+++VPS PPSN KGLARKVWPDVLGLFNSRLWSLWGP+
Sbjct: 206 TEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFNSRLWSLWGPH 249

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BLAST of Carg03827 vs. TAIR10
Match: AT5G13090.1 (unknown protein)

HSP 1 Score: 94.7 bits (234), Expect = 8.3e-20
Identity = 65/167 (38.92%), Postives = 83/167 (49.70%), Query Frame = 0


Query: 101 CFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLA--NGEKSGKNIKGKRKDKIGRRSSEK- 160
           CFDCY +YW RW+SSPN ELIH+ IEAFE      N     K+ +GK+K+K GRR ++  
Sbjct: 104 CFDCYTNYWFRWDSSPNRELIHEIIEAFENHHGEENSASRSKSKRGKKKEKPGRRVTDSD 163

Query: 161 ----PVDVSPLSPLPLPEVLPLAIDDGSVAPATSVSGGV-----EAAEGSGE-------- 220
                           P V P+  ++ +V+ ++ VS  V     E AEG  E        
Sbjct: 164 XXXXXXXXXXXXXXXXPVVEPM--NETTVSESSHVSSPVRLSEAEVAEGEPEDEXXXXXX 223

Query: 221 LPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 248
                          S  + HKGLARKV PDVLGLF+S  W LW PN
Sbjct: 224 XXXXXXXXXXXXXXXSNVTGHKGLARKVLPDVLGLFHSNFWRLWNPN 268

[Close]

BLAST of Carg03827 vs. TAIR10
Match: AT1G24270.1 (unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 52/137 (37.96%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 28  VFNYLPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGAPRAN 87
           VF  L +AIL L++VL+ +D EVLA+++ RS+ T+        N  S +  +   AP  +
Sbjct: 83  VFKLLQSAILVLVSVLSAEDLEVLAYLITRSLNTT--------NVVSCKKKRSHKAPLLD 142

Query: 88  SGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGKNI--KGK 147
                        CFDCY SYW++W+SS N ELI+Q IEAFE+ L   E S  +   K K
Sbjct: 143 -----------CQCFDCYTSYWSKWDSSSNRELINQIIEAFEDHLTRDEISASHTSKKNK 200

Query: 148 RKDKIGRRSSEKPVDVS 163
           ++ K    S E+P + S
Sbjct: 203 KRAKKIEISEEQPQNKS 200

[Close]

BLAST of Carg03827 vs. TAIR10
Match: AT1G62422.1 (unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 32  LPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGAPRANSGSV 91
           LP AIL+L+  L+++DREVLA+++  S + S   S L +NK                   
Sbjct: 28  LPVAILSLVAALSVEDREVLAYLISNSGD-SNRISRLKKNKEDNH--------------- 87

Query: 92  CVHAPPSL-SCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQL 133
             H+P  L  CF CY SYW RW++SP  +LIH+ I+A+E+ L
Sbjct: 88  --HSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIIDAYEDSL 111

[Close]

BLAST of Carg03827 vs. TAIR10
Match: AT1G12020.1 (unknown protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 32  LPAAILALLTVLTIDDREVLAFMMRRSMETS--TPSSSLSENKFSKRGSKKSGAPRANSG 91
           LP AI +L  VL+ +DREVLA+++  +  +    P+S L++ K  K+    + +P  +  
Sbjct: 27  LPVAIFSLAAVLSPEDREVLAYLISTASYSGERNPTSRLNKTKAHKKALFDNHSPLFH-- 86

Query: 92  SVCVHAPPSLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQL 133
                      CF CY SYW RW+SSP+ +LIH+ I+AFE+ L
Sbjct: 87  ---------CDCFSCYTSYWVRWDSSPSRQLIHEIIDAFEDSL 118

[Close]

BLAST of Carg03827 vs. TrEMBL
Match: tr|A0A1S3CC21|A0A1S3CC21_CUCME (uncharacterized protein LOC103499074 OS=Cucumis melo OX=3656 GN=LOC103499074 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.0e-85
Identity = 169/229 (73.80%), Postives = 188/229 (82.10%), Query Frame = 0


Query: 25  FFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGAP 84
           FFDV NYLP AI AL++VLT+DDREVLAFMMRRSMETS+PSSS+S  KFSKR SKKS  P
Sbjct: 26  FFDVLNYLPVAIFALVSVLTVDDREVLAFMMRRSMETSSPSSSVSGKKFSKRVSKKSDTP 85

Query: 85  RANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGKNIKG 144
           RA S S CVHAPPSL+CFDCYMSYW+RWNSSPNGELIHQAIEAFEEQLA GEKS KN+KG
Sbjct: 86  RAGSRSACVHAPPSLTCFDCYMSYWDRWNSSPNGELIHQAIEAFEEQLAKGEKSSKNVKG 145

Query: 145 KRKDKIGRRSSEKPVDVSPLSPLPLPEVLPLAIDDG-SVAPATSVSGGVEAAEGSGELPR 204
           KRKDKIGRRS +K +++     LP+PE  PL ID+G S APATS S  VE  E SGE PR
Sbjct: 146 KRKDKIGRRSLDKSLNIVSPPLLPVPETHPLQIDEGSSAAPATSGSAAVEVEEKSGEAPR 205

Query: 205 T-----EARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 248
           +     E+R A+VV+PS PP+ HKGLARKVWPDVLGLFNSRLWSLW PN
Sbjct: 206 SEEEAVESRGALVVIPSPPPNIHKGLARKVWPDVLGLFNSRLWSLWSPN 254

[Close]

BLAST of Carg03827 vs. TrEMBL
Match: tr|A0A0A0KC94|A0A0A0KC94_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094670 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.6e-68
Identity = 144/204 (70.59%), Postives = 162/204 (79.41%), Query Frame = 0


Query: 54  MMRRSMETSTPSSSLSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWN 113
           MMRRSMETS+PSSS+S  KFSKR SKKS APRA S S CVHAPPSL+CFDCYMSYW+RWN
Sbjct: 1   MMRRSMETSSPSSSVSGKKFSKRVSKKSDAPRAGSHSACVHAPPSLTCFDCYMSYWDRWN 60

Query: 114 SSPNGELIHQAIEAFEEQLANGEKSGKNIKGKRKDKIGRRSSEKPVDVSPLSPLPLPEVL 173
           SSPNGELIHQAIEAFEEQLA GEKS KN+KGKRKDKI RRS +K +++     LP+PE  
Sbjct: 61  SSPNGELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKISRRSLDKSLNIVSPPLLPVPETH 120

Query: 174 PLAIDDG-SVAPATSVSGGVE----AAEGSGELPRT-----EARAAMVVVPSSPPSNHKG 233
           PL ID+G S A ATS S  VE     A+GS + PRT     E+R A+VV+PS PP++HKG
Sbjct: 121 PLQIDEGSSTAQATSGSIDVEVEEKTADGSLDPPRTEEDSVESRGALVVIPSPPPNSHKG 180

Query: 234 LARKVWPDVLGLFNSRLWSLWGPN 248
            ARKVWPDVLGLFNSRLWSLW PN
Sbjct: 181 FARKVWPDVLGLFNSRLWSLWSPN 204

[Close]

BLAST of Carg03827 vs. TrEMBL
Match: tr|A0A2C9USG7|A0A2C9USG7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G008400 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.8e-43
Identity = 122/248 (49.19%), Postives = 144/248 (58.06%), Query Frame = 0


Query: 28  VFNYLPAAILALLTVLTIDDREVLAFMMRRSMETST-----PSSSLSENKFSKRGSKKSG 87
           V   LPAAILAL +VL+++DREVLA+M+ RS++T+T       SSLS++   K   K   
Sbjct: 33  VLKLLPAAILALASVLSLEDREVLAYMITRSLKTTTNHNPNDPSSLSQDSKRKSSKKPPN 92

Query: 88  APRANSGSVCVHAPP--SLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGK 147
           AP  N  S   H PP     CFDCY SYW RW+SS N ELIHQ IEAFEE L NGE+S K
Sbjct: 93  APTTNFVS-SNHKPPIFDCDCFDCYTSYWFRWDSSSNRELIHQVIEAFEEHLTNGEQSRK 152

Query: 148 NIKGKRKDKIGRRSSEKPVDVSPLSPLPLPEVL---PLAIDDGSVAPATS----VSGGVE 207
           + KGKR+D++GRR  EKPV    L     PE+L   PL  D+ S+         V     
Sbjct: 153 SSKGKRRDRVGRRVGEKPV----LDVTDRPEMLETPPLNADESSIVSPDDDVPLVGTPER 212

Query: 208 AAEGSGE--------------LPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSR 248
           AAEG GE              +P  E     VV      S+HKGLARKV PDVLGL NSR
Sbjct: 213 AAEGEGEEEKGAKRTEEKSELVPAVETEEMAVVRSPQAVSSHKGLARKVLPDVLGLLNSR 272

[Close]

BLAST of Carg03827 vs. TrEMBL
Match: tr|A0A251R1P8|A0A251R1P8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G222700 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 3.0e-40
Identity = 116/246 (47.15%), Postives = 151/246 (61.38%), Query Frame = 0


Query: 28  VFNYLPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGAPRAN 87
           V   LPAAILAL +VL+++DREVLA+++ RSM+T+   SS+      K+ SKK   P++ 
Sbjct: 32  VLQLLPAAILALASVLSLEDREVLAYLITRSMKTTPNISSIPAQDRKKKSSKK--GPKST 91

Query: 88  SGSVCVHAPP--SLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGKNI-KG 147
           S S   H PP     CFDCY SYW +W+SSPN ELIHQAIEAFE+ L NGEK+ KN  +G
Sbjct: 92  SAS--THQPPMFDCDCFDCYRSYWFKWDSSPNRELIHQAIEAFEDHLTNGEKTKKNSGRG 151

Query: 148 KRKDKIGRRSSEKPVDVSPLSPLPLPE----VLPLAIDDGSVA--PATSV--------SG 207
           KR+DK+ RR + +PVDV+    + L E       LA++  + A  P   V        + 
Sbjct: 152 KRRDKLSRREAPEPVDVAAQDSVFLEENDQVSHELAVESSASALLPENDVVLVGSNEKAD 211

Query: 208 GVE---------AAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLW 248
           GVE          AE + E P T A    ++  ++  SNH+GLARKV PDVLGLFNSRLW
Sbjct: 212 GVEENDAKVEDLGAEVNLEPPET-ADDVAIIARTASASNHRGLARKVLPDVLGLFNSRLW 271

[Close]

BLAST of Carg03827 vs. TrEMBL
Match: tr|B9RMB4|B9RMB4_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1079250 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39
Identity = 115/240 (47.92%), Postives = 138/240 (57.50%), Query Frame = 0


Query: 25  FFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSMETST--PSSSLSENKFSKRGSKKSG 84
           F  V   LPA IL L +VL++ DREVLA+M+ RS++T+T       S  + SK+ S K+ 
Sbjct: 36  FLSVLKLLPATILTLASVLSLQDREVLAYMITRSLKTTTNPTPKQASLLQGSKKKSTKNK 95

Query: 85  APRANSGSVCVHAPPSL--SCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSGK 144
           +P         H  PS    CFDCY SYW RW+SSPN ELIHQ IEAFEE L+NGE   K
Sbjct: 96  SPN-------THKSPSFDCDCFDCYTSYWFRWDSSPNRELIHQVIEAFEEHLSNGELFKK 155

Query: 145 NIKGKRKDKIGRRSSEKPV-DVSPLSPLPLPEVL---PLAIDDGSVAPATSVSGGV---- 204
             +GKR+DK GRR  +K V DV     +  PE        +    V+P   VS  V    
Sbjct: 156 TSRGKRRDKTGRRVGDKSVIDVLGRPEMQEPEATVNESSLVGGAVVSPNDDVSPVVMLER 215

Query: 205 ----EAAEGSGELP-RTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 248
               E  +GS E P   E     VV  S PP+NHKGLARKV PDVLGLFNSRLW+LW PN
Sbjct: 216 AADGEEVKGSEESPAEAETEEMAVVARSPPPNNHKGLARKVLPDVLGLFNSRLWNLWNPN 268

The following BLAST results are available for this feature:

BLAST of Carg03827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960393.1	1.5e-115	93.52	uncharacterized protein LOC111461129 [Cucurbita moschata]	[more]
XP_023514611.1	1.7e-100	96.39	uncharacterized protein LOC111778855 [Cucurbita pepo subsp. pepo]	[more]
XP_023004896.1	1.8e-97	96.30	uncharacterized protein LOC111498074 [Cucurbita maxima]	[more]
XP_022991379.1	3.8e-87	77.58	uncharacterized protein LOC111488030 [Cucurbita maxima]	[more]
XP_022953880.1	8.4e-87	75.00	uncharacterized protein LOC111456285 [Cucurbita moschata]	[more]

BLAST of Carg03827 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13090.1	8.3e-20	38.92	unknown protein	[more]
AT1G24270.1	1.2e-13	37.96	unknown protein	[more]
AT1G62422.1	1.8e-11	39.22	unknown protein	[more]
AT1G12020.1	2.4e-11	37.86	unknown protein	[more]

BLAST of Carg03827 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03827 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CC21\|A0A1S3CC21_CUCME	4.0e-85	73.80	uncharacterized protein LOC103499074 OS=Cucumis melo OX=3656 GN=LOC103499074 PE=...	[more]
tr\|A0A0A0KC94\|A0A0A0KC94_CUCSA	2.6e-68	70.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094670 PE=4 SV=1	[more]
tr\|A0A2C9USG7\|A0A2C9USG7_MANES	3.8e-43	49.19	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G008400 PE=4 SV=...	[more]
tr\|A0A251R1P8\|A0A251R1P8_PRUPE	3.0e-40	47.15	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G222700 PE=4 SV=1	[more]
tr\|B9RMB4\|B9RMB4_RICCO	1.5e-39	47.92	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1079250 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03827-RA	Carg03827-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..163
None	No IPR available	PANTHER	PTHR31903	FAMILY NOT NAMED	coord: 1..247
None	No IPR available	PANTHER	PTHR31903:SF4	SUBFAMILY NOT NAMED	coord: 1..247

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03827	Cla001511	Watermelon (97103) v1	carwmB0986
Carg03827	Csa6G094670	Cucumber (Chinese Long) v2	carcuB0995
Carg03827	MELO3C022326	Melon (DHL92) v3.5.1	carmeB0951
Carg03827	ClCG06G002040	Watermelon (Charleston Gray)	carwcgB0956
Carg03827	CSPI06G07710	Wild cucumber (PI 183967)	carcpiB1018
Carg03827	Cucsa.349530	Cucumber (Gy14) v1	carcgyB1099
Carg03827	CmaCh08G000040	Cucurbita maxima (Rimu)	carcmaB1361
Carg03827	Lsi09G017380	Bottle gourd (USVL1VR-Ls)	carlsiB890
Carg03827	Cp4.1LG01g11840	Cucurbita pepo (Zucchini)	carcpeB1360
Carg03827	Cp4.1LG17g09160	Cucurbita pepo (Zucchini)	carcpeB1359
Carg03827	CsGy6G007760	Cucumber (Gy14) v2	carcgybB0968
Carg03827	MELO3C022326.2	Melon (DHL92) v3.6.1	carmedB0957
Carg03827	CsaV3_6G008090	Cucumber (Chinese Long) v3	carcucB1024
Carg03827	Cla97C06G111350	Watermelon (97103) v2	carwmbB1032
Carg03827	Bhi12G002162	Wax gourd	carwgoB1141

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03827	Carg11588	Silver-seed gourd	carcarB014

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03827	Cucurbita maxima (Rimu)	carcmaB1351
Carg03827	Cucurbita moschata (Rifu)	carcmoB1312
Carg03827	Cucurbita moschata (Rifu)	carcmoB1322