Cp4.1LG17g08590 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG17g08590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMitochondrial glycoprotein family protein
LocationCp4.1LG17 : 5164812 .. 5166920 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGTAGCGGAGGACTGTGGGTGGGCTTAAACCCTAAACCCCAACGAAGATCAATCTCCTCTTCGTCTTCCCCTCGATTCAAATTCATCACATCAATGGCGCGAGTGATTCGACCATTGAGAAGATGCCTTCAGTTTTCCTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCTGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCGTTTGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTCGAACGGCATCCTCCCGATCAGGTTGGCTTCTCTATTATTCTCTCTGCCGCGAGTTGAAATATGAAATATGAGAAGTTCTAGACGAAGTTAATTTAGTGCCTAGTGGATTATCGTAGTTCCTCAATTTTGGTATTGTAGCTCTGTAGTTAGTTTGGAAGAGTTCTTGATGTTAATACTTGCATGTATGGATGGGTTCTGCCTTCGAAGTAACAGAAGCTTTATGAGTGTCCCCAAATTAACTGGACGCGAAAATTTCACGAACGTTCAGAAAATTGAGCATCGCCGTTGTTTAGTGGGCTGTTCTTCCGAGGTTCAGCTCTTTAGTAAAAAATTTCGATTGAATAATTTCGTCCTCCATGCTTTCCTTGAACTACTAACATCTCCGTAGGAGTGTTGTACTTTTAATTGGTTAGGTGATGTGGGATCAATCTCATTTTTCAGCCACTAACAATGCAAGTAAATTGTGGGTATTTGGAATTGGAATTTGCATTCAGATATTCTTGTTTCGATGCTTCATTCGCAAAGGCTAAATCGCCATTAAACCTTAGCGGATTGGTTATGGTAAATTTAATCGCATATTATATTCAAATACTCTTCAATTGTCAGCTAGAAATTGGTACAAGGCCCCATAAGCAGATATTAGTGTTAATTGGAGAGAAAATAACATTATAAGTCCTGATACTACGTTGAATCACCACTGAAACATTAAACAGAATACTCAAGCTGTTGGTTTACATTAAATAGCTTTAATTGGTTTTGATTGTTTTCCAGTTTCGATTTTGAGATCTCTTCTCATTTTCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTATGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACGCCTCCTGGGGAAGATGTGCTTCTTCACATTACCATTATTGTGAATATAACCAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGTATGATTTCCAACGCCCTTAAATATTTTTTGTACTCTGATTCTAAGTATGATGAACGGTACTAGCAAATAATTATGTGCATATGATGTCGGTGACAATCTTCAACTTATTGTTCTTATTTAAACCTTGCCTCAATTATTAAATTGATGTTTCTTCCAGCTTCCTGAGAATTAATTTCGTGCACAGGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATATGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAGTTAATTGAAATTGATTCTGCAGTATTTTCAGATGAGAAATAGTTGTTTGCTGTTGGCGCTACCGATATCTATTTCTGGTATGTAATATTGACCCTTTTGTATTAGACTATCCAATATATGAAGTATTTTATACAAAATTAAAGAGGATGATTGTCTTCATAACAAGATTCCAGCTTCTGTTCCTGTCTACTCTCCGAGAATACATTATTATGTGACTTGTATCTTCAAGGTCTGAACTTTCCTAGTGGATTAATCGACTGTAAAGTATAAAAGATATGAAATCAAGAAAATGGCTTGTCAACAATCTTATGCCACATTAAACCTACTTGATTTCAGTAG

mRNA sequence

TAGTAGCGGAGGACTGTGGGTGGGCTTAAACCCTAAACCCCAACGAAGATCAATCTCCTCTTCGTCTTCCCCTCGATTCAAATTCATCACATCAATGGCGCGAGTGATTCGACCATTGAGAAGATGCCTTCAGTTTTCCTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCTGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCGTTTGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTCGAACGGCATCCTCCCGATCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTATGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACGCCTCCTGGGGAAGATGTGCTTCTTCACATTACCATTATTGTGAATATAACCAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATATGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAGTTAATTGAAATTGATTCTGCAGTATTTTCAGATGAGAAATAGTTGTTTGCTGTTGGCGCTACCGATATCTATTTCTGGTATGTAATATTGACCCTTTTGTATTAGACTATCCAATATATGAAGTATTTTATACAAAATTAAAGAGGATGATTGTCTTCATAACAAGATTCCAGCTTCTGTTCCTGTCTACTCTCCGAGAATACATTATTATGTGACTTGTATCTTCAAGGTCTGAACTTTCCTAGTGGATTAATCGACTGTAAAGTATAAAAGATATGAAATCAAGAAAATGGCTTGTCAACAATCTTATGCCACATTAAACCTACTTGATTTCAGTAG

Coding sequence (CDS)

ATGGCGCGAGTGATTCGACCATTGAGAAGATGCCTTCAGTTTTCCTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCTGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCGTTTGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTCGAACGGCATCCTCCCGATCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTATGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACGCCTCCTGGGGAAGATGTGCTTCTTCACATTACCATTATTGTGAATATAACCAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATATGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAGTTAATTGA

Protein sequence

MARVIRPLRRCLQFSSSSSHKALMSQAHRLNPIPFPPENPCVLFKTLRHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVTMFDHARTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWMETVKAFIEVN
BLAST of Cp4.1LG17g08590 vs. Swiss-Prot
Match: YB95_ARATH (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.3e-19
Identity = 63/201 (31.34%), Postives = 108/201 (53.73%), Query Frame = 1

Query: 49  HYISEMRRSAFEGSILRLLRNEIRYELERH--PPDQPVTKFG-AFTIDERPGEQWIRLER 108
           +Y + + R + E +++R++ +EI   L+      D+ +T     F I+++PG Q + L R
Sbjct: 51  NYSTAIDRISSEQTLIRVIDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTR 110

Query: 109 EYGENENIKIEVTM--------FDHARTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAW 168
           +Y   E+IK+ V+M         D      G      I ++V +TK+ S   LE  C A+
Sbjct: 111 DYN-GEHIKVVVSMPSLVSDENDDDDDDDEGPSNESSIPLVVTVTKK-SGLTLEFSCMAF 170

Query: 169 PNDLEIDRLLTRR-GEKMPAQ-PYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKY 228
           P+++ ID L  +  G+ +  Q    GP+F++LD++L+ + Y +LE RGV      FLH+Y
Sbjct: 171 PDEIAIDALSVKHPGDSLEDQLANEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEY 230

Query: 229 MKNKDKTEFIRWMETVKAFIE 237
           M  K   E+  W++ VK F+E
Sbjct: 231 MTRKVNREYFLWLKNVKEFME 249

BLAST of Cp4.1LG17g08590 vs. Swiss-Prot
Match: MAM33_YEAST (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM33 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 1

Query: 179 YAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWMETVKAF 235
           Y GP F  LD++LQ SL  YLE+RGV+++LA F+  Y + K+  E+I W+E +K F
Sbjct: 209 YHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMKKF 264

BLAST of Cp4.1LG17g08590 vs. Swiss-Prot
Match: Y2979_ARATH (Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana GN=At2g39790 PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 42/154 (27.27%), Postives = 77/154 (50.00%), Query Frame = 1

Query: 92  IDERPGEQWIRLEREYGENENIKIEVTMFDHARTPPGEDVL---------LHITIIVNIT 151
           I ++PG+Q + L   Y + E I ++V M        G+DV+         L   ++V + 
Sbjct: 95  IRDKPGDQSVTLTAYYND-ERIHVDVGM-----PYLGDDVIDVFGPNNDELSFPLVVTVI 154

Query: 152 KRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEAR 211
           K++   + E  C A+ + +++  L     +    +    P FK LDD+L+ + + YL  R
Sbjct: 155 KKNGVSI-EFTCQAYADYIDLTDLTVHDYQYQMGET-DWPRFKNLDDNLKKAFHRYLATR 214

Query: 212 GVDDQLAVFLHKYMKNKDKTEFIRWMETVKAFIE 237
            +D  +   LHKYM +K K E++ W++ V  F++
Sbjct: 215 -LDANITKLLHKYMVSKIKREYLLWLKNVNKFVD 239

BLAST of Cp4.1LG17g08590 vs. TrEMBL
Match: A0A0A0K687_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432060 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.3e-100
Identity = 187/248 (75.40%), Postives = 209/248 (84.27%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSS----HKALMSQAHRLNPIPFPPENPCVLFKTLRHYISEMRR 60
           MAR+IRPLR+CLQFSSSSS    HK+L +Q H  NPI FPPEN  V  KTLRHYI++MRR
Sbjct: 1   MARLIRPLRKCLQFSSSSSSFSSHKSLTTQLHLQNPIVFPPENHYVFCKTLRHYIADMRR 60

Query: 61  SAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIE 120
           SAFEG+ILRLLRNEIRYEL+R PP QPVTKFGAFT+DERPGEQWIRLEREY E E IKIE
Sbjct: 61  SAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYEEREKIKIE 120

Query: 121 VTMFDHARTPP-------GEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLTR 180
            TMFD +   P       G+DVLLHIT IV+ITK   S+VL+I+CSAWP+ +EIDRL  R
Sbjct: 121 ATMFDQSIPAPKSGGSSSGKDVLLHITTIVHITKGGGSDVLKIICSAWPDSIEIDRLFLR 180

Query: 181 RGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWME 238
            GE MPAQPYAGP+FKELDDDLQNSLY+YLEARGVDDQLAVFLH+YMKNKDKTEFIRWME
Sbjct: 181 GGEIMPAQPYAGPDFKELDDDLQNSLYEYLEARGVDDQLAVFLHEYMKNKDKTEFIRWME 240

BLAST of Cp4.1LG17g08590 vs. TrEMBL
Match: M5WXV7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021707mg PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.6e-75
Identity = 152/254 (59.84%), Postives = 188/254 (74.02%), Query Frame = 1

Query: 1   MARVIRPLRRCL--QFSSSSSHKALMSQ------AHR-----LNPIPFPPENPCVLFKTL 60
           MAR+IRPLR+C+    SSSSS K L  Q      AH      LNP   PP+        L
Sbjct: 1   MARLIRPLRKCILSPLSSSSSSKILAQQIPTLHFAHEEQVSLLNPKLLPPQ-------CL 60

Query: 61  RHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREY 120
           R YISEMR+SAFEG +LRLLRNEI+YEL+R  P+QPVTKF +FT+++RPGEQWI L R++
Sbjct: 61  RTYISEMRKSAFEGHVLRLLRNEIQYELDRSTPNQPVTKFKSFTVNDRPGEQWISLRRKF 120

Query: 121 GENENIKIEVTMFDHARTPP-----GEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLE 180
            ENE+IKIE TMFD A   P     G++V LHIT+IVNI+K++   VLEIMCS WP+ +E
Sbjct: 121 EENEDIKIEATMFDGAVPAPKSSGLGKEVQLHITMIVNISKKEGGNVLEIMCSVWPDTIE 180

Query: 181 IDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKT 237
           I++L  R  + MPAQ Y GPEFKELDD+LQ++LY++ EARG++D LAVFLH+YMKNKDKT
Sbjct: 181 INKLFVREPDNMPAQAYVGPEFKELDDELQDALYEFSEARGINDDLAVFLHEYMKNKDKT 240

BLAST of Cp4.1LG17g08590 vs. TrEMBL
Match: V4SJL5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026378mg PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.9e-71
Identity = 140/242 (57.85%), Postives = 183/242 (75.62%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSSHKALMSQAHRLNPIPFPPE--NPCVLFKTLRHYISEMRRSA 60
           MA + R L+RC   +     K+++  + + NP  F     NP V   + R+YISEMR+SA
Sbjct: 1   MASLTRSLKRCQLLT-----KSMLLNSTKQNPSLFKSNLRNP-VSQISKRNYISEMRKSA 60

Query: 61  FEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVT 120
           FEG+ILRLLRNEI+YELER  P QP+TKF +FT+D+RPGEQW+RL R++GENE+IKIE T
Sbjct: 61  FEGNILRLLRNEIQYELERSSPKQPITKFNSFTVDDRPGEQWVRLTRKFGENEDIKIEAT 120

Query: 121 MFDHA----RTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKM 180
           MFD +    +   GEDV LH T+IVNI+K D  EVLEIMCSAWP+ +EI +L  R  +K+
Sbjct: 121 MFDGSIPVSKAGVGEDVKLHSTLIVNISKGDE-EVLEIMCSAWPDSIEITKLFVRGNDKL 180

Query: 181 PAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWMETVKAF 237
            A PY GPEFKELDD+LQ+SLY++LE RG+++QL  FLH+Y+KNKDKTEF+RWM+ VK++
Sbjct: 181 SADPYVGPEFKELDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVKSY 235

BLAST of Cp4.1LG17g08590 vs. TrEMBL
Match: A0A067DVD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026512mg PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.5e-71
Identity = 139/242 (57.44%), Postives = 183/242 (75.62%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSSHKALMSQAHRLNPIPFPPE--NPCVLFKTLRHYISEMRRSA 60
           MA + R L+RC   +     K+++  + + NP  F     NP V   + R+YISEMR+SA
Sbjct: 1   MASLTRSLKRCQLLT-----KSMLLNSTKQNPSLFKSNLRNP-VSQISKRNYISEMRKSA 60

Query: 61  FEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVT 120
           FEG+ILRLLRNEI+YELER  P QP+TKF +FT+D+RPGEQW+RL R++GENE+IKIE T
Sbjct: 61  FEGNILRLLRNEIQYELERSSPKQPITKFNSFTVDDRPGEQWVRLTRKFGENEDIKIEAT 120

Query: 121 MFDHA----RTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKM 180
           MFD +    +   GEDV LH T+IVNI+K D  EVLE+MCSAWP+ +EI +L  R  +K+
Sbjct: 121 MFDGSIPVSKAGVGEDVKLHSTLIVNISKGDE-EVLEMMCSAWPDSIEITKLFVRGNDKL 180

Query: 181 PAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWMETVKAF 237
            A PY GPEFKELDD+LQ+SLY++LE RG+++QL  FLH+Y+KNKDKTEF+RWM+ VK++
Sbjct: 181 SADPYVGPEFKELDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVKSY 235

BLAST of Cp4.1LG17g08590 vs. TrEMBL
Match: A0A067L416_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27011 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.6e-69
Identity = 139/245 (56.73%), Postives = 184/245 (75.10%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSSHKALMSQAHRLNPIPFPPENPCVLFKTL--RHYISEMRRSA 60
           MAR +RPLRR L     S  K L  +  +L+P   P  +   L +T+  R+YISEMR+SA
Sbjct: 1   MARSVRPLRRILL----SPPKNLFPELQQLHPNAIPVFHKIELPQTIITRNYISEMRKSA 60

Query: 61  FEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVT 120
           F+ +ILR+LR+EI+YE +R PP QPV KF +F ID+RPGEQWI L+R++ ENE IK+E T
Sbjct: 61  FQENILRILRSEIQYEFDRAPPKQPVAKFKSFAIDDRPGEQWISLKRKFAENEEIKVEAT 120

Query: 121 MFDHARTPPGE-------DVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLTRRG 180
           MFD A TP  +       +V LHIT+IVNI+K D  + LEIMCSAWP+ +EI +L TR+ 
Sbjct: 121 MFDGA-TPSSKSSDVTNNNVQLHITLIVNISKGDG-DALEIMCSAWPDSIEITKLFTRKS 180

Query: 181 EKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWMETV 237
            KMPAQ Y GP+FKELDD+LQ+SLY++LEARG++D++A FLH+YMKNKD+TE+IRWM TV
Sbjct: 181 NKMPAQAYVGPDFKELDDELQDSLYEFLEARGINDEMAAFLHEYMKNKDRTEYIRWMGTV 239

BLAST of Cp4.1LG17g08590 vs. TAIR10
Match: AT1G15870.1 (AT1G15870.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 240.7 bits (613), Expect = 9.0e-64
Identity = 131/248 (52.82%), Postives = 168/248 (67.74%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSSHKALMSQAHRLNPIPFPPENPCVLFKTLRH------YISEM 60
           MAR++R LRR   FSSS+S       A+R NP      N   +F + R       Y+SEM
Sbjct: 1   MARLLRCLRRSFIFSSSTSI------AYR-NPRICVQSNQSYIFLSSRKFLSSGSYVSEM 60

Query: 61  RRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIK 120
           RR+AFEG+ILRL+R EI+ EL+  P  QP   FG FT+DERPGEQWI L R++GE E+IK
Sbjct: 61  RRTAFEGNILRLIRLEIQSELDHSPILQPEESFGPFTVDERPGEQWISLRRKFGEKEDIK 120

Query: 121 IEVTMFD------HARTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLT 180
           IE TMFD       + T   EDV LHIT IVNI+K D  E LEIMCSAWP+ ++I +   
Sbjct: 121 IEATMFDGSVPSSKSTTSDPEDVQLHITFIVNISKGDG-ETLEIMCSAWPDTIQITKFFV 180

Query: 181 RRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWM 237
           R+  +     Y GPEF+E++D+LQ+S+Y +LE RG+ D LA FLH+YMKNKDK E+IRWM
Sbjct: 181 RKSSQNSPNAYIGPEFQEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIRWM 240

BLAST of Cp4.1LG17g08590 vs. TAIR10
Match: AT1G80720.1 (AT1G80720.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-62
Identity = 109/188 (57.98%), Postives = 142/188 (75.53%), Query Frame = 1

Query: 54  MRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENI 113
           M++SAF+G+ILRL+RNEI YEL+  PP QP   FG FT+DERPGEQWI L+R +G+ E+I
Sbjct: 1   MQKSAFQGNILRLIRNEIEYELDHSPPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDI 60

Query: 114 KIEVTMFDHA-----RTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLT 173
           KIE TMFD +      T    + +LHIT IVNI+K  ++E LEIMCSAWP+ +EI +L  
Sbjct: 61  KIEATMFDRSVPTSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISKLCI 120

Query: 174 RRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWM 233
           RRG       Y GPEF+ELDD LQ++LY +LE RG+ D+LAVFLH+YMKNK K E++RWM
Sbjct: 121 RRGINTSPSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWM 180

Query: 234 ETVKAFIE 237
           E+VK+++E
Sbjct: 181 ESVKSYVE 188

BLAST of Cp4.1LG17g08590 vs. TAIR10
Match: AT4G31930.1 (AT4G31930.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-45
Identity = 94/242 (38.84%), Postives = 145/242 (59.92%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSSHKALMSQAHRLNPIPFPPENPCVLFKTLRHYISEMRRSAFE 60
           MA ++R L++  + S S S + L+S     + +P             R   +   +S F 
Sbjct: 1   MALLLRTLQKS-RISPSHSSRTLISWVRCKSLLPNHQS---------RDVTTSPAKSPFR 60

Query: 61  GSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVTMF 120
            +ILR++RNEI Y+ +  PP QP T+F +F++++ PGEQ I ++ ++GE+E+IK+E TMF
Sbjct: 61  SNILRIIRNEIEYQSDYAPPHQPATEFKSFSVEDCPGEQCIVMKGKFGEDEDIKMEATMF 120

Query: 121 DHARTPP-------GEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEK 180
           D     P       G DV LHI+++V+I+K D SE +E +CS WPN +EI +L   R  K
Sbjct: 121 DGFMNVPRAGLDASGHDVRLHISLLVDISKVDGSEEIEFLCSVWPNRIEIRKLYKLRRNK 180

Query: 181 MPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWMETVKA 236
           +  QPY GP F  L  D Q ++ ++L  RG+D +L  FLH+YM NKD+ E I+W+  + +
Sbjct: 181 ITGQPYMGPNFGNLKYDFQTAIREFLRVRGIDAELCFFLHEYMMNKDRIELIQWLRKLNS 232

BLAST of Cp4.1LG17g08590 vs. TAIR10
Match: AT3G55605.1 (AT3G55605.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-20
Identity = 58/195 (29.74%), Postives = 105/195 (53.85%), Query Frame = 1

Query: 62  SILRLLRNEIR--YELERHPPDQPVTKFG--AFTIDERPGEQWIRLEREYGENENIKIEV 121
           ++++++ +EI+  +E + H  D+         F I++ PG + + L REY   E IK+EV
Sbjct: 65  TLIQVIDSEIKDSFEADDHDADEETIDSSDFPFKIEDNPGHRTVTLTREYN-GEQIKVEV 124

Query: 122 TMFDHARTPPGEDV--------------LLHITIIVNITKRDSSEVLEIMCSAWPNDLEI 181
           +M   A     +DV                 I ++V +TK+ S   LE  C+A+P+++ I
Sbjct: 125 SMPGLAMDENEDDVDDDEDGDGRHEKSNESSIPLVVTVTKK-SGLSLEFSCTAFPDEIVI 184

Query: 182 DRLLTRRGEKMPAQP--YAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDK 237
           D L   R +    +   Y GP+F+ELD++++ S + +LE RG+      FL++YM  KD 
Sbjct: 185 DGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGIKASATDFLYEYMMKKDS 244

BLAST of Cp4.1LG17g08590 vs. TAIR10
Match: AT2G39795.1 (AT2G39795.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20
Identity = 63/201 (31.34%), Postives = 108/201 (53.73%), Query Frame = 1

Query: 49  HYISEMRRSAFEGSILRLLRNEIRYELERH--PPDQPVTKFG-AFTIDERPGEQWIRLER 108
           +Y + + R + E +++R++ +EI   L+      D+ +T     F I+++PG Q + L R
Sbjct: 51  NYSTAIDRISSEQTLIRVIDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTR 110

Query: 109 EYGENENIKIEVTM--------FDHARTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAW 168
           +Y   E+IK+ V+M         D      G      I ++V +TK+ S   LE  C A+
Sbjct: 111 DYN-GEHIKVVVSMPSLVSDENDDDDDDDEGPSNESSIPLVVTVTKK-SGLTLEFSCMAF 170

Query: 169 PNDLEIDRLLTRR-GEKMPAQ-PYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKY 228
           P+++ ID L  +  G+ +  Q    GP+F++LD++L+ + Y +LE RGV      FLH+Y
Sbjct: 171 PDEIAIDALSVKHPGDSLEDQLANEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEY 230

Query: 229 MKNKDKTEFIRWMETVKAFIE 237
           M  K   E+  W++ VK F+E
Sbjct: 231 MTRKVNREYFLWLKNVKEFME 249

BLAST of Cp4.1LG17g08590 vs. NCBI nr
Match: gi|449436176|ref|XP_004135870.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.9e-100
Identity = 187/248 (75.40%), Postives = 209/248 (84.27%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSS----HKALMSQAHRLNPIPFPPENPCVLFKTLRHYISEMRR 60
           MAR+IRPLR+CLQFSSSSS    HK+L +Q H  NPI FPPEN  V  KTLRHYI++MRR
Sbjct: 1   MARLIRPLRKCLQFSSSSSSFSSHKSLTTQLHLQNPIVFPPENHYVFCKTLRHYIADMRR 60

Query: 61  SAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIE 120
           SAFEG+ILRLLRNEIRYEL+R PP QPVTKFGAFT+DERPGEQWIRLEREY E E IKIE
Sbjct: 61  SAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYEEREKIKIE 120

Query: 121 VTMFDHARTPP-------GEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLTR 180
            TMFD +   P       G+DVLLHIT IV+ITK   S+VL+I+CSAWP+ +EIDRL  R
Sbjct: 121 ATMFDQSIPAPKSGGSSSGKDVLLHITTIVHITKGGGSDVLKIICSAWPDSIEIDRLFLR 180

Query: 181 RGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWME 238
            GE MPAQPYAGP+FKELDDDLQNSLY+YLEARGVDDQLAVFLH+YMKNKDKTEFIRWME
Sbjct: 181 GGEIMPAQPYAGPDFKELDDDLQNSLYEYLEARGVDDQLAVFLHEYMKNKDKTEFIRWME 240

BLAST of Cp4.1LG17g08590 vs. NCBI nr
Match: gi|659122490|ref|XP_008461172.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 5.8e-97
Identity = 185/249 (74.30%), Postives = 204/249 (81.93%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSS-----SSHKALMSQAHRLNPIPFPPENPCVLFKTLRHYISEMR 60
           MAR+IRPLR CLQFSS       SHK+L++Q H  NPI F  EN  V  KT+RHYI++MR
Sbjct: 1   MARLIRPLRECLQFSSYFSSSFPSHKSLITQLHLQNPIVFLHENHYVFRKTVRHYIADMR 60

Query: 61  RSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKI 120
           RSAFEG+ILRLLRNEIRYEL+R PP QPVTKFGAFT+DERPGEQWIRLEREYG+ E IKI
Sbjct: 61  RSAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYGDKEKIKI 120

Query: 121 EVTMFDHA-------RTPPGEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEIDRLLT 180
           E TMFD +        +   EDVLLHIT IV+ITK   S+VL IMCSAWP+ LEIDRL  
Sbjct: 121 EATMFDQSIPASKSGGSSSSEDVLLHITAIVHITKVGGSDVLRIMCSAWPDSLEIDRLFL 180

Query: 181 RRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTEFIRWM 238
           RRGE MPAQPYAGPEFKELDDDLQNSLY+YLEAR VDDQLAVFLH+YMKNKDKTEFIRWM
Sbjct: 181 RRGEIMPAQPYAGPEFKELDDDLQNSLYEYLEAREVDDQLAVFLHEYMKNKDKTEFIRWM 240

BLAST of Cp4.1LG17g08590 vs. NCBI nr
Match: gi|595960041|ref|XP_007216847.1| (hypothetical protein PRUPE_ppa021707mg [Prunus persica])

HSP 1 Score: 290.0 bits (741), Expect = 3.7e-75
Identity = 152/254 (59.84%), Postives = 188/254 (74.02%), Query Frame = 1

Query: 1   MARVIRPLRRCL--QFSSSSSHKALMSQ------AHR-----LNPIPFPPENPCVLFKTL 60
           MAR+IRPLR+C+    SSSSS K L  Q      AH      LNP   PP+        L
Sbjct: 1   MARLIRPLRKCILSPLSSSSSSKILAQQIPTLHFAHEEQVSLLNPKLLPPQ-------CL 60

Query: 61  RHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREY 120
           R YISEMR+SAFEG +LRLLRNEI+YEL+R  P+QPVTKF +FT+++RPGEQWI L R++
Sbjct: 61  RTYISEMRKSAFEGHVLRLLRNEIQYELDRSTPNQPVTKFKSFTVNDRPGEQWISLRRKF 120

Query: 121 GENENIKIEVTMFDHARTPP-----GEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLE 180
            ENE+IKIE TMFD A   P     G++V LHIT+IVNI+K++   VLEIMCS WP+ +E
Sbjct: 121 EENEDIKIEATMFDGAVPAPKSSGLGKEVQLHITMIVNISKKEGGNVLEIMCSVWPDTIE 180

Query: 181 IDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKT 237
           I++L  R  + MPAQ Y GPEFKELDD+LQ++LY++ EARG++D LAVFLH+YMKNKDKT
Sbjct: 181 INKLFVREPDNMPAQAYVGPEFKELDDELQDALYEFSEARGINDDLAVFLHEYMKNKDKT 240

BLAST of Cp4.1LG17g08590 vs. NCBI nr
Match: gi|657944601|ref|XP_008375488.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Malus domestica])

HSP 1 Score: 290.0 bits (741), Expect = 3.7e-75
Identity = 151/253 (59.68%), Postives = 188/253 (74.31%), Query Frame = 1

Query: 1   MARVIRPLRRCLQFSSSSS---------HKALMSQAHRLNPIPFPPENPCVLFKTLRHYI 60
           MAR+IRPLR+   F SSS          H A   Q   LNP   PP+     F+  R YI
Sbjct: 8   MARLIRPLRKSTPFPSSSRIPIQQTPTLHFAQEKQVSLLNPSLQPPQ-----FR--RTYI 67

Query: 61  SEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENE 120
           SEMR+SAFEG+ILRLLR EI+YEL+  P  QPVTKF +FT++++PGEQWI L+R++GE E
Sbjct: 68  SEMRKSAFEGNILRLLRREIQYELDHSPATQPVTKFKSFTVNDQPGEQWITLKRKFGEKE 127

Query: 121 NIKIEVTMFDHARTPP--------GEDVLLHITIIVNITKRDSSEVLEIMCSAWPNDLEI 180
           +IKIE TMFD +   P        G+DV LHIT+IVNI+K++   V EIMCSAWP+ +EI
Sbjct: 128 DIKIEATMFDGSVPIPNSKGGAGLGKDVQLHITMIVNISKKEGGNVFEIMCSAWPDTIEI 187

Query: 181 DRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNKDKTE 237
           ++L  R+ EKMPAQPYAGPEFKELDD+LQ+SLY++LEAR ++D LA+FLH+YMKNKDKTE
Sbjct: 188 NKLFVRKPEKMPAQPYAGPEFKELDDELQDSLYEFLEARSINDDLAIFLHEYMKNKDKTE 247

BLAST of Cp4.1LG17g08590 vs. NCBI nr
Match: gi|645245190|ref|XP_008228763.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Prunus mume])

HSP 1 Score: 282.3 bits (721), Expect = 7.6e-73
Identity = 149/257 (57.98%), Postives = 187/257 (72.76%), Query Frame = 1

Query: 1   MARVIRPLRRCL--QFSSSSSHKALMSQ------AHR-----LNPIPFPPENPCVLFKTL 60
           MAR+I PLR+ +    SSSSS K L+ Q      AH      LNP   PP+        L
Sbjct: 1   MARLITPLRKSVLSPLSSSSSSKFLVQQIPTFHFAHEEQVFLLNPKLLPPQ-------CL 60

Query: 61  RHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREY 120
           R YISEMR+SAFEG +LRLLRNEI+YEL+R PP +PVTKF +FT+++RPGEQWI L R++
Sbjct: 61  RTYISEMRKSAFEGHVLRLLRNEIQYELDRSPPKKPVTKFKSFTVNDRPGEQWISLRRKF 120

Query: 121 GENENIKIEVTMFDHARTPP--------GEDVLLHITIIVNITKRDSSEVLEIMCSAWPN 180
            +NE+IKIE TMFD A   P        G++V LHIT+IVNI+K++   VLEIMCS WP+
Sbjct: 121 EDNEDIKIEATMFDGAVPAPKSKGGSGLGKEVQLHITMIVNISKKEGGNVLEIMCSVWPD 180

Query: 181 DLEIDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYMKNK 237
            +EI++L  R  + MPAQ Y GPEFKELDD+LQ++LY++ EARG++D LAVFLH+YMKNK
Sbjct: 181 TIEINKLFVREPDNMPAQAYVGPEFKELDDELQDALYEFSEARGINDDLAVFLHEYMKNK 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YB95_ARATH6.3e-1931.34Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g... [more]
MAM33_YEAST1.0e-0848.21Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 2045... [more]
Y2979_ARATH1.3e-0827.27Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana GN=At2g... [more]
Match NameE-valueIdentityDescription
A0A0A0K687_CUCSA1.3e-10075.40Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432060 PE=4 SV=1[more]
M5WXV7_PRUPE2.6e-7559.84Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021707mg PE=4 SV=1[more]
V4SJL5_9ROSI2.9e-7157.85Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026378mg PE=4 SV=1[more]
A0A067DVD2_CITSI6.5e-7157.44Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026512mg PE=4 SV=1[more]
A0A067L416_JATCU1.6e-6956.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27011 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G15870.19.0e-6452.82 Mitochondrial glycoprotein family protein[more]
AT1G80720.12.2e-6257.98 Mitochondrial glycoprotein family protein[more]
AT4G31930.12.5e-4538.84 Mitochondrial glycoprotein family protein[more]
AT3G55605.12.7e-2029.74 Mitochondrial glycoprotein family protein[more]
AT2G39795.13.6e-2031.34 Mitochondrial glycoprotein family protein[more]
Match NameE-valueIdentityDescription
gi|449436176|ref|XP_004135870.1|1.9e-10075.40PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus][more]
gi|659122490|ref|XP_008461172.1|5.8e-9774.30PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo][more]
gi|595960041|ref|XP_007216847.1|3.7e-7559.84hypothetical protein PRUPE_ppa021707mg [Prunus persica][more]
gi|657944601|ref|XP_008375488.1|3.7e-7559.68PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Malus domestic... [more]
gi|645245190|ref|XP_008228763.1|7.6e-7357.98PREDICTED: uncharacterized protein At2g39795, mitochondrial [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005759mitochondrial matrix
Vocabulary: INTERPRO
TermDefinition
IPR003428MAM33
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g08590.1Cp4.1LG17g08590.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003428Mitochondrial glycoproteinGENE3DG3DSA:3.10.280.10coord: 58..236
score: 4.5
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 67..235
score: 3.3
IPR003428Mitochondrial glycoproteinunknownSSF54529Mitochondrial glycoprotein MAM33-likecoord: 59..236
score: 2.35
NoneNo IPR availablePANTHERPTHR10826COMPLEMENT COMPONENT 1coord: 1..237
score: 2.0
NoneNo IPR availablePANTHERPTHR10826:SF14SUBFAMILY NOT NAMEDcoord: 1..237
score: 2.0