CmaCh08G005940 (gene) Cucurbita maxima (Rimu)

NameCmaCh08G005940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMitochondrial glycoprotein family protein, putative
LocationCma_Chr08 : 3375349 .. 3377168 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTATTTATCTATTATTATTTCTTAATTTAGTAGCGGACTGTGGGTGTGCTTAAACCCTAAACCCCAAGGAAGATCAATCTCCTCTTCGTCTTCCCCTCGATTCGAATTCATCACATCAATGGCGCGAGTGATTCGACCATTGAGAAAATGCCTTCAGTTTTCTTCTTCTTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCCGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCTTTCGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTTGAACGGCATCCTCCCGATCAGGTTGGCTTCTCTATTATTCTCTCTGCCGCGAGTTGAAATATGACATATGAGAAGTTCTAGACAAAGTTAATTTAGTGCCTATTGGATTATCGTAGTTCCTCAATTTTTGTATTGGAGCTCTGTAGTTAGTTTGGAAGAGTTCTCGATGTTAATAATTGCATGTATGGATGGGTTCTACCTTCGAAGTAACAGAAGCTTTATGAGTGTCCCCAAATTAACTGCACGCGAAAATTTCACGAACGTTCAGAAAATTGAGCATCGCCGTTGTTTAGTGGGCTGTTCTTCCGAGGTTCAGCTATTCTGTAGTAAAAAATTTCGATTGAATAATTTCGTCCTCCATGCTTTCCTTGAACTACTAACATCTCCGCAGGAGTGTTGTACTTTTAATTGGTTAGGTGATGTGGGATCAATCTCATTTTTCAGCCACTAACAATGCAAGTAAACTGTGGGTATTTGGAATTGGAATTTGCATTCAGATATTCTTGTTTCGATGCTTCATTCGCAAAGGCTAAACCACCATTAAACCTTAGCGGATTGGTTATGGTAAATTTAATCGCATATTACATTCAAATACTCTTCAATTGTCAGCTAGAAATTGGTACAAGGCCCCATAAGCAGATATTAGTGTTAATTGGAGAGAAAATAACATTATAAGTCCTGATACTACGTTGAATCACCACTGAAACATTAAACAGAATACTCAAGCTGTTGGTTTACATTAAATAGCTTTAATTGGTTTTGATTGTTTTCCAGTTTCGATTTTGAGATCTCTTCTCATTTTCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTACGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACACCTCCAGGGGAAGATGTGCTTCTTCACATTACCATTATTGTCAATATAAACAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGTATGATTTCCAACGCCCTTAAATATTTTTTGTACTCTGATTCTAAGTATGATGAATAGTAGTAGCAAATAATTACGTGCATATGATGTCGGTGACAATCTTCAGCTTATTGCTCTTATTTAAATATATCTCCTTGCCTCAATTATTAAATAGATGTTTCTTCCAGCTTCCTGAGAATTAATTTCGTGCACAGGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATGTGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAATTAATTGA

mRNA sequence

ATTTATTTATCTATTATTATTTCTTAATTTAGTAGCGGACTGTGGGTGTGCTTAAACCCTAAACCCCAAGGAAGATCAATCTCCTCTTCGTCTTCCCCTCGATTCGAATTCATCACATCAATGGCGCGAGTGATTCGACCATTGAGAAAATGCCTTCAGTTTTCTTCTTCTTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCCGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCTTTCGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTTGAACGGCATCCTCCCGATCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTACGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACACCTCCAGGGGAAGATGTGCTTCTTCACATTACCATTATTGTCAATATAAACAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATGTGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAATTAATTGA

Coding sequence (CDS)

ATGGCGCGAGTGATTCGACCATTGAGAAAATGCCTTCAGTTTTCTTCTTCTTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCCGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCTTTCGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTTGAACGGCATCCTCCCGATCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTACGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACACCTCCAGGGGAAGATGTGCTTCTTCACATTACCATTATTGTCAATATAAACAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATGTGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAATTAATTGA

Protein sequence

MARVIRPLRKCLQFSSSSSSSHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVTMFDHARTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVKAFIEIN
BLAST of CmaCh08G005940 vs. Swiss-Prot
Match: YB95_ARATH (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.1e-18
Identity = 68/243 (27.98%), Postives = 124/243 (51.03%), Query Frame = 1

Query: 9   RKCLQFSSSSSSSHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMRRSAFEGSILRL 68
           R   +F+S      +++ + A+R + +   P + R       +Y + + R + E +++R+
Sbjct: 10  RSASKFASVYGGRVRSISAVANRAS-LARNPSSIRPFVSRALNYSTAIDRISSEQTLIRV 69

Query: 69  LRNEIRYELERH--PPDQPVTKFG-AFTIDERPGEQWIRLEREYGENENIKIEVTM---- 128
           + +EI   L+      D+ +T     F I+++PG Q + L R+Y   E+IK+ V+M    
Sbjct: 70  IDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTRDYN-GEHIKVVVSMPSLV 129

Query: 129 ----FDHARTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRR-GEKM 188
                D      G      I ++V + K+ S   LE  C A+P+++ ID L  +  G+ +
Sbjct: 130 SDENDDDDDDDEGPSNESSIPLVVTVTKK-SGLTLEFSCMAFPDEIAIDALSVKHPGDSL 189

Query: 189 PAQ-PYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVKA 239
             Q    GP+F++LD++L+ + Y +LE RGV      FLH+Y+  K   E+  W++ VK 
Sbjct: 190 EDQLANEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWLKNVKE 249

BLAST of CmaCh08G005940 vs. Swiss-Prot
Match: Y2979_ARATH (Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana GN=At2g39790 PE=3 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 54/219 (24.66%), Postives = 103/219 (47.03%), Query Frame = 1

Query: 32  LNPIPFPPENPRVLFKTLRHYISEMRRSAFEGSILRLLRNEIRYELERHPPD-QPVTKFG 91
           LNP P  P   R    T+      + + + E ++  ++ +E+   L+   P+       G
Sbjct: 35  LNPSPLSPFVSRGFLYTMA-----VDKLSSEQTLHLVIDSELNSALQTDDPNLNEEMAPG 94

Query: 92  AFT--IDERPGEQWIRLEREYGENENIKIEVTMFDHARTPPGEDVL---------LHITI 151
           +F   I ++PG+Q + L   Y + E I ++V M        G+DV+         L   +
Sbjct: 95  SFPLKIRDKPGDQSVTLTAYYND-ERIHVDVGM-----PYLGDDVIDVFGPNNDELSFPL 154

Query: 152 IVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYD 211
           +V + K++   + E  C A+ + +++  L     +    +    P FK LDD+L+ + + 
Sbjct: 155 VVTVIKKNGVSI-EFTCQAYADYIDLTDLTVHDYQYQMGET-DWPRFKNLDDNLKKAFHR 214

Query: 212 YLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVKAFIE 239
           YL  R +D  +   LHKY+ +K K E++ W++ V  F++
Sbjct: 215 YLATR-LDANITKLLHKYMVSKIKREYLLWLKNVNKFVD 239

BLAST of CmaCh08G005940 vs. Swiss-Prot
Match: MAM33_YEAST (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM33 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 1

Query: 181 YAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVKAF 237
           Y GP F  LD++LQ SL  YLE+RGV+++LA F+  Y + K+  E+I W+E +K F
Sbjct: 209 YHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMKKF 264

BLAST of CmaCh08G005940 vs. TrEMBL
Match: A0A0A0K687_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432060 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 7.9e-101
Identity = 188/248 (75.81%), Postives = 210/248 (84.68%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSS--SHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMRR 60
           MAR+IRPLRKCLQFSSSSSS  SHK+L +Q H  NPI FPPEN  V  KTLRHYI++MRR
Sbjct: 1   MARLIRPLRKCLQFSSSSSSFSSHKSLTTQLHLQNPIVFPPENHYVFCKTLRHYIADMRR 60

Query: 61  SAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIE 120
           SAFEG+ILRLLRNEIRYEL+R PP QPVTKFGAFT+DERPGEQWIRLEREY E E IKIE
Sbjct: 61  SAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYEEREKIKIE 120

Query: 121 VTMFDHARTPP-------GEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTR 180
            TMFD +   P       G+DVLLHIT IV+I K   S+VL+I+CSAWP+ +EIDRL  R
Sbjct: 121 ATMFDQSIPAPKSGGSSSGKDVLLHITTIVHITKGGGSDVLKIICSAWPDSIEIDRLFLR 180

Query: 181 RGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWME 240
            GE MPAQPYAGP+FKELDDDLQNSLY+YLEARGVDDQLAVFLH+Y+KNKDKTEFIRWME
Sbjct: 181 GGEIMPAQPYAGPDFKELDDDLQNSLYEYLEARGVDDQLAVFLHEYMKNKDKTEFIRWME 240

BLAST of CmaCh08G005940 vs. TrEMBL
Match: M5WXV7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021707mg PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 8.8e-76
Identity = 152/254 (59.84%), Postives = 188/254 (74.02%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSSSHKALMSQ------AHR-----LNPIPFPPENPRVLFKTL 60
           MAR+IRPLRKC+    SSSSS K L  Q      AH      LNP   PP+        L
Sbjct: 1   MARLIRPLRKCILSPLSSSSSSKILAQQIPTLHFAHEEQVSLLNPKLLPPQ-------CL 60

Query: 61  RHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREY 120
           R YISEMR+SAFEG +LRLLRNEI+YEL+R  P+QPVTKF +FT+++RPGEQWI L R++
Sbjct: 61  RTYISEMRKSAFEGHVLRLLRNEIQYELDRSTPNQPVTKFKSFTVNDRPGEQWISLRRKF 120

Query: 121 GENENIKIEVTMFDHARTPP-----GEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLE 180
            ENE+IKIE TMFD A   P     G++V LHIT+IVNI+K++   VLEIMCS WP+ +E
Sbjct: 121 EENEDIKIEATMFDGAVPAPKSSGLGKEVQLHITMIVNISKKEGGNVLEIMCSVWPDTIE 180

Query: 181 IDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKT 239
           I++L  R  + MPAQ Y GPEFKELDD+LQ++LY++ EARG++D LAVFLH+Y+KNKDKT
Sbjct: 181 INKLFVREPDNMPAQAYVGPEFKELDDELQDALYEFSEARGINDDLAVFLHEYMKNKDKT 240

BLAST of CmaCh08G005940 vs. TrEMBL
Match: V4SJL5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026378mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70
Identity = 139/244 (56.97%), Postives = 183/244 (75.00%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSSSHKALMSQAHRLNPIPFPPE--NPRVLFKTLRHYISEMRR 60
           MA + R L++C   +       K+++  + + NP  F     NP V   + R+YISEMR+
Sbjct: 1   MASLTRSLKRCQLLT-------KSMLLNSTKQNPSLFKSNLRNP-VSQISKRNYISEMRK 60

Query: 61  SAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIE 120
           SAFEG+ILRLLRNEI+YELER  P QP+TKF +FT+D+RPGEQW+RL R++GENE+IKIE
Sbjct: 61  SAFEGNILRLLRNEIQYELERSSPKQPITKFNSFTVDDRPGEQWVRLTRKFGENEDIKIE 120

Query: 121 VTMFDHA----RTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRRGE 180
            TMFD +    +   GEDV LH T+IVNI+K D  EVLEIMCSAWP+ +EI +L  R  +
Sbjct: 121 ATMFDGSIPVSKAGVGEDVKLHSTLIVNISKGDE-EVLEIMCSAWPDSIEITKLFVRGND 180

Query: 181 KMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVK 239
           K+ A PY GPEFKELDD+LQ+SLY++LE RG+++QL  FLH+Y+KNKDKTEF+RWM+ VK
Sbjct: 181 KLSADPYVGPEFKELDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVK 235

BLAST of CmaCh08G005940 vs. TrEMBL
Match: A0A067DVD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026512mg PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.3e-70
Identity = 138/244 (56.56%), Postives = 183/244 (75.00%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSSSHKALMSQAHRLNPIPFPPE--NPRVLFKTLRHYISEMRR 60
           MA + R L++C   +       K+++  + + NP  F     NP V   + R+YISEMR+
Sbjct: 1   MASLTRSLKRCQLLT-------KSMLLNSTKQNPSLFKSNLRNP-VSQISKRNYISEMRK 60

Query: 61  SAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIE 120
           SAFEG+ILRLLRNEI+YELER  P QP+TKF +FT+D+RPGEQW+RL R++GENE+IKIE
Sbjct: 61  SAFEGNILRLLRNEIQYELERSSPKQPITKFNSFTVDDRPGEQWVRLTRKFGENEDIKIE 120

Query: 121 VTMFDHA----RTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRRGE 180
            TMFD +    +   GEDV LH T+IVNI+K D  EVLE+MCSAWP+ +EI +L  R  +
Sbjct: 121 ATMFDGSIPVSKAGVGEDVKLHSTLIVNISKGDE-EVLEMMCSAWPDSIEITKLFVRGND 180

Query: 181 KMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVK 239
           K+ A PY GPEFKELDD+LQ+SLY++LE RG+++QL  FLH+Y+KNKDKTEF+RWM+ VK
Sbjct: 181 KLSADPYVGPEFKELDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVK 235

BLAST of CmaCh08G005940 vs. TrEMBL
Match: A0A059C6T5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02483 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.4e-68
Identity = 137/226 (60.62%), Postives = 171/226 (75.66%), Query Frame = 1

Query: 19  SSSHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMRRSAFEGSILRLLRNEIRYELE 78
           SSS +A  S  H   P P P   PR   +T   YIS+MR+SAFEG+ILRLLRNEI++ELE
Sbjct: 40  SSSSRASPSGRHAAPPPP-PGGAPRAPSRT---YISDMRKSAFEGNILRLLRNEIQHELE 99

Query: 79  RHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVTMFDHARTPP------GED 138
           R PP +PV +FG FT+D+RPGEQWIRL+R++GENE+IKIE TMFD +          GED
Sbjct: 100 RAPPAKPVDRFGPFTVDDRPGEQWIRLKRKFGENEDIKIEATMFDGSIPASKTAGSLGED 159

Query: 139 VLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKMPAQPYAGPEFKELDDD 198
           V LHI+ IVNI K   S VLEIMCSAWP+ +EI +L+    ++MP+  Y GP FKELDD+
Sbjct: 160 VELHISFIVNITKDKGSNVLEIMCSAWPDSIEISKLVVHGCQRMPSGLYTGPGFKELDDE 219

Query: 199 LQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVKAFIE 239
           LQ++LYD+LE RGVD++LAVFLH+Y+ NKDKTEFIRWM+TVK F+E
Sbjct: 220 LQDALYDFLEERGVDEELAVFLHQYMANKDKTEFIRWMDTVKHFVE 261

BLAST of CmaCh08G005940 vs. TAIR10
Match: AT1G15870.1 (AT1G15870.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 238.8 bits (608), Expect = 3.4e-63
Identity = 127/250 (50.80%), Postives = 168/250 (67.20%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSSSHKALMSQAHRLNPIPFPPENPRVLFKTLRH------YIS 60
           MAR++R LR+   FSSS+S +++         NP      N   +F + R       Y+S
Sbjct: 1   MARLLRCLRRSFIFSSSTSIAYR---------NPRICVQSNQSYIFLSSRKFLSSGSYVS 60

Query: 61  EMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENEN 120
           EMRR+AFEG+ILRL+R EI+ EL+  P  QP   FG FT+DERPGEQWI L R++GE E+
Sbjct: 61  EMRRTAFEGNILRLIRLEIQSELDHSPILQPEESFGPFTVDERPGEQWISLRRKFGEKED 120

Query: 121 IKIEVTMFD------HARTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRL 180
           IKIE TMFD       + T   EDV LHIT IVNI+K D  E LEIMCSAWP+ ++I + 
Sbjct: 121 IKIEATMFDGSVPSSKSTTSDPEDVQLHITFIVNISKGDG-ETLEIMCSAWPDTIQITKF 180

Query: 181 LTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIR 239
             R+  +     Y GPEF+E++D+LQ+S+Y +LE RG+ D LA FLH+Y+KNKDK E+IR
Sbjct: 181 FVRKSSQNSPNAYIGPEFQEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIR 240

BLAST of CmaCh08G005940 vs. TAIR10
Match: AT1G80720.1 (AT1G80720.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 234.6 bits (597), Expect = 6.5e-62
Identity = 108/188 (57.45%), Postives = 142/188 (75.53%), Query Frame = 1

Query: 56  MRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENI 115
           M++SAF+G+ILRL+RNEI YEL+  PP QP   FG FT+DERPGEQWI L+R +G+ E+I
Sbjct: 1   MQKSAFQGNILRLIRNEIEYELDHSPPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDI 60

Query: 116 KIEVTMFDHA-----RTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLT 175
           KIE TMFD +      T    + +LHIT IVNI+K  ++E LEIMCSAWP+ +EI +L  
Sbjct: 61  KIEATMFDRSVPTSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISKLCI 120

Query: 176 RRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWM 235
           RRG       Y GPEF+ELDD LQ++LY +LE RG+ D+LAVFLH+Y+KNK K E++RWM
Sbjct: 121 RRGINTSPSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWM 180

Query: 236 ETVKAFIE 239
           E+VK+++E
Sbjct: 181 ESVKSYVE 188

BLAST of CmaCh08G005940 vs. TAIR10
Match: AT4G31930.1 (AT4G31930.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 177.9 bits (450), Expect = 7.2e-45
Identity = 82/187 (43.85%), Postives = 124/187 (66.31%), Query Frame = 1

Query: 58  RSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKI 117
           +S F  +ILR++RNEI Y+ +  PP QP T+F +F++++ PGEQ I ++ ++GE+E+IK+
Sbjct: 46  KSPFRSNILRIIRNEIEYQSDYAPPHQPATEFKSFSVEDCPGEQCIVMKGKFGEDEDIKM 105

Query: 118 EVTMFDHARTPP-------GEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLT 177
           E TMFD     P       G DV LHI+++V+I+K D SE +E +CS WPN +EI +L  
Sbjct: 106 EATMFDGFMNVPRAGLDASGHDVRLHISLLVDISKVDGSEEIEFLCSVWPNRIEIRKLYK 165

Query: 178 RRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWM 237
            R  K+  QPY GP F  L  D Q ++ ++L  RG+D +L  FLH+Y+ NKD+ E I+W+
Sbjct: 166 LRRNKITGQPYMGPNFGNLKYDFQTAIREFLRVRGIDAELCFFLHEYMMNKDRIELIQWL 225

BLAST of CmaCh08G005940 vs. TAIR10
Match: AT3G55605.1 (AT3G55605.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19
Identity = 56/195 (28.72%), Postives = 104/195 (53.33%), Query Frame = 1

Query: 64  SILRLLRNEIR--YELERHPPDQPVTKFG--AFTIDERPGEQWIRLEREYGENENIKIEV 123
           ++++++ +EI+  +E + H  D+         F I++ PG + + L REY   E IK+EV
Sbjct: 65  TLIQVIDSEIKDSFEADDHDADEETIDSSDFPFKIEDNPGHRTVTLTREYN-GEQIKVEV 124

Query: 124 TMFDHARTPPGEDV--------------LLHITIIVNINKRDSSEVLEIMCSAWPNDLEI 183
           +M   A     +DV                 I ++V + K+ S   LE  C+A+P+++ I
Sbjct: 125 SMPGLAMDENEDDVDDDEDGDGRHEKSNESSIPLVVTVTKK-SGLSLEFSCTAFPDEIVI 184

Query: 184 DRLLTRRGEKMPAQP--YAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDK 239
           D L   R +    +   Y GP+F+ELD++++ S + +LE RG+      FL++Y+  KD 
Sbjct: 185 DGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGIKASATDFLYEYMMKKDS 244

BLAST of CmaCh08G005940 vs. TAIR10
Match: AT2G39795.1 (AT2G39795.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19
Identity = 68/243 (27.98%), Postives = 124/243 (51.03%), Query Frame = 1

Query: 9   RKCLQFSSSSSSSHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMRRSAFEGSILRL 68
           R   +F+S      +++ + A+R + +   P + R       +Y + + R + E +++R+
Sbjct: 10  RSASKFASVYGGRVRSISAVANRAS-LARNPSSIRPFVSRALNYSTAIDRISSEQTLIRV 69

Query: 69  LRNEIRYELERH--PPDQPVTKFG-AFTIDERPGEQWIRLEREYGENENIKIEVTM---- 128
           + +EI   L+      D+ +T     F I+++PG Q + L R+Y   E+IK+ V+M    
Sbjct: 70  IDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTRDYN-GEHIKVVVSMPSLV 129

Query: 129 ----FDHARTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRR-GEKM 188
                D      G      I ++V + K+ S   LE  C A+P+++ ID L  +  G+ +
Sbjct: 130 SDENDDDDDDDEGPSNESSIPLVVTVTKK-SGLTLEFSCMAFPDEIAIDALSVKHPGDSL 189

Query: 189 PAQ-PYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVKA 239
             Q    GP+F++LD++L+ + Y +LE RGV      FLH+Y+  K   E+  W++ VK 
Sbjct: 190 EDQLANEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWLKNVKE 249

BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|449436176|ref|XP_004135870.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 1.1e-100
Identity = 188/248 (75.81%), Postives = 210/248 (84.68%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSS--SHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMRR 60
           MAR+IRPLRKCLQFSSSSSS  SHK+L +Q H  NPI FPPEN  V  KTLRHYI++MRR
Sbjct: 1   MARLIRPLRKCLQFSSSSSSFSSHKSLTTQLHLQNPIVFPPENHYVFCKTLRHYIADMRR 60

Query: 61  SAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIE 120
           SAFEG+ILRLLRNEIRYEL+R PP QPVTKFGAFT+DERPGEQWIRLEREY E E IKIE
Sbjct: 61  SAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYEEREKIKIE 120

Query: 121 VTMFDHARTPP-------GEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTR 180
            TMFD +   P       G+DVLLHIT IV+I K   S+VL+I+CSAWP+ +EIDRL  R
Sbjct: 121 ATMFDQSIPAPKSGGSSSGKDVLLHITTIVHITKGGGSDVLKIICSAWPDSIEIDRLFLR 180

Query: 181 RGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWME 240
            GE MPAQPYAGP+FKELDDDLQNSLY+YLEARGVDDQLAVFLH+Y+KNKDKTEFIRWME
Sbjct: 181 GGEIMPAQPYAGPDFKELDDDLQNSLYEYLEARGVDDQLAVFLHEYMKNKDKTEFIRWME 240

BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|659122490|ref|XP_008461172.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 5.9e-97
Identity = 185/249 (74.30%), Postives = 206/249 (82.73%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSS---SSSSSHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMR 60
           MAR+IRPLR+CLQFSS   SS  SHK+L++Q H  NPI F  EN  V  KT+RHYI++MR
Sbjct: 1   MARLIRPLRECLQFSSYFSSSFPSHKSLITQLHLQNPIVFLHENHYVFRKTVRHYIADMR 60

Query: 61  RSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKI 120
           RSAFEG+ILRLLRNEIRYEL+R PP QPVTKFGAFT+DERPGEQWIRLEREYG+ E IKI
Sbjct: 61  RSAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYGDKEKIKI 120

Query: 121 EVTMFDHA-------RTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLT 180
           E TMFD +        +   EDVLLHIT IV+I K   S+VL IMCSAWP+ LEIDRL  
Sbjct: 121 EATMFDQSIPASKSGGSSSSEDVLLHITAIVHITKVGGSDVLRIMCSAWPDSLEIDRLFL 180

Query: 181 RRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWM 240
           RRGE MPAQPYAGPEFKELDDDLQNSLY+YLEAR VDDQLAVFLH+Y+KNKDKTEFIRWM
Sbjct: 181 RRGEIMPAQPYAGPEFKELDDDLQNSLYEYLEAREVDDQLAVFLHEYMKNKDKTEFIRWM 240

BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|595960041|ref|XP_007216847.1| (hypothetical protein PRUPE_ppa021707mg [Prunus persica])

HSP 1 Score: 291.6 bits (745), Expect = 1.3e-75
Identity = 152/254 (59.84%), Postives = 188/254 (74.02%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSSSHKALMSQ------AHR-----LNPIPFPPENPRVLFKTL 60
           MAR+IRPLRKC+    SSSSS K L  Q      AH      LNP   PP+        L
Sbjct: 1   MARLIRPLRKCILSPLSSSSSSKILAQQIPTLHFAHEEQVSLLNPKLLPPQ-------CL 60

Query: 61  RHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREY 120
           R YISEMR+SAFEG +LRLLRNEI+YEL+R  P+QPVTKF +FT+++RPGEQWI L R++
Sbjct: 61  RTYISEMRKSAFEGHVLRLLRNEIQYELDRSTPNQPVTKFKSFTVNDRPGEQWISLRRKF 120

Query: 121 GENENIKIEVTMFDHARTPP-----GEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLE 180
            ENE+IKIE TMFD A   P     G++V LHIT+IVNI+K++   VLEIMCS WP+ +E
Sbjct: 121 EENEDIKIEATMFDGAVPAPKSSGLGKEVQLHITMIVNISKKEGGNVLEIMCSVWPDTIE 180

Query: 181 IDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKT 239
           I++L  R  + MPAQ Y GPEFKELDD+LQ++LY++ EARG++D LAVFLH+Y+KNKDKT
Sbjct: 181 INKLFVREPDNMPAQAYVGPEFKELDDELQDALYEFSEARGINDDLAVFLHEYMKNKDKT 240

BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|657944601|ref|XP_008375488.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Malus domestica])

HSP 1 Score: 289.7 bits (740), Expect = 4.8e-75
Identity = 150/253 (59.29%), Postives = 187/253 (73.91%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSS-------SSHKALMSQAHRLNPIPFPPENPRVLFKTLRHYI 60
           MAR+IRPLRK   F SSS        + H A   Q   LNP   PP+  R        YI
Sbjct: 8   MARLIRPLRKSTPFPSSSRIPIQQTPTLHFAQEKQVSLLNPSLQPPQFRRT-------YI 67

Query: 61  SEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENE 120
           SEMR+SAFEG+ILRLLR EI+YEL+  P  QPVTKF +FT++++PGEQWI L+R++GE E
Sbjct: 68  SEMRKSAFEGNILRLLRREIQYELDHSPATQPVTKFKSFTVNDQPGEQWITLKRKFGEKE 127

Query: 121 NIKIEVTMFDHARTPP--------GEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEI 180
           +IKIE TMFD +   P        G+DV LHIT+IVNI+K++   V EIMCSAWP+ +EI
Sbjct: 128 DIKIEATMFDGSVPIPNSKGGAGLGKDVQLHITMIVNISKKEGGNVFEIMCSAWPDTIEI 187

Query: 181 DRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTE 239
           ++L  R+ EKMPAQPYAGPEFKELDD+LQ+SLY++LEAR ++D LA+FLH+Y+KNKDKTE
Sbjct: 188 NKLFVRKPEKMPAQPYAGPEFKELDDELQDSLYEFLEARSINDDLAIFLHEYMKNKDKTE 247

BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|645245190|ref|XP_008228763.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Prunus mume])

HSP 1 Score: 283.9 bits (725), Expect = 2.6e-73
Identity = 149/257 (57.98%), Postives = 187/257 (72.76%), Query Frame = 1

Query: 1   MARVIRPLRKCLQFSSSSSSSHKALMSQ------AHR-----LNPIPFPPENPRVLFKTL 60
           MAR+I PLRK +    SSSSS K L+ Q      AH      LNP   PP+        L
Sbjct: 1   MARLITPLRKSVLSPLSSSSSSKFLVQQIPTFHFAHEEQVFLLNPKLLPPQ-------CL 60

Query: 61  RHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREY 120
           R YISEMR+SAFEG +LRLLRNEI+YEL+R PP +PVTKF +FT+++RPGEQWI L R++
Sbjct: 61  RTYISEMRKSAFEGHVLRLLRNEIQYELDRSPPKKPVTKFKSFTVNDRPGEQWISLRRKF 120

Query: 121 GENENIKIEVTMFDHARTPP--------GEDVLLHITIIVNINKRDSSEVLEIMCSAWPN 180
            +NE+IKIE TMFD A   P        G++V LHIT+IVNI+K++   VLEIMCS WP+
Sbjct: 121 EDNEDIKIEATMFDGAVPAPKSKGGSGLGKEVQLHITMIVNISKKEGGNVLEIMCSVWPD 180

Query: 181 DLEIDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNK 239
            +EI++L  R  + MPAQ Y GPEFKELDD+LQ++LY++ EARG++D LAVFLH+Y+KNK
Sbjct: 181 TIEINKLFVREPDNMPAQAYVGPEFKELDDELQDALYEFSEARGINDDLAVFLHEYMKNK 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YB95_ARATH4.1e-1827.98Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g... [more]
Y2979_ARATH1.0e-0824.66Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana GN=At2g... [more]
MAM33_YEAST1.3e-0848.21Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 2045... [more]
Match NameE-valueIdentityDescription
A0A0A0K687_CUCSA7.9e-10175.81Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432060 PE=4 SV=1[more]
M5WXV7_PRUPE8.8e-7659.84Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021707mg PE=4 SV=1[more]
V4SJL5_9ROSI1.9e-7056.97Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026378mg PE=4 SV=1[more]
A0A067DVD2_CITSI4.3e-7056.56Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026512mg PE=4 SV=1[more]
A0A059C6T5_EUCGR1.4e-6860.62Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G15870.13.4e-6350.80 Mitochondrial glycoprotein family protein[more]
AT1G80720.16.5e-6257.45 Mitochondrial glycoprotein family protein[more]
AT4G31930.17.2e-4543.85 Mitochondrial glycoprotein family protein[more]
AT3G55605.12.3e-1928.72 Mitochondrial glycoprotein family protein[more]
AT2G39795.12.3e-1927.98 Mitochondrial glycoprotein family protein[more]
Match NameE-valueIdentityDescription
gi|449436176|ref|XP_004135870.1|1.1e-10075.81PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus][more]
gi|659122490|ref|XP_008461172.1|5.9e-9774.30PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo][more]
gi|595960041|ref|XP_007216847.1|1.3e-7559.84hypothetical protein PRUPE_ppa021707mg [Prunus persica][more]
gi|657944601|ref|XP_008375488.1|4.8e-7559.29PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Malus domestic... [more]
gi|645245190|ref|XP_008228763.1|2.6e-7357.98PREDICTED: uncharacterized protein At2g39795, mitochondrial [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003428MAM33
Vocabulary: Cellular Component
TermDefinition
GO:0005759mitochondrial matrix
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G005940.1CmaCh08G005940.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003428Mitochondrial glycoproteinGENE3DG3DSA:3.10.280.10coord: 60..238
score: 3.1
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 69..237
score: 1.9
IPR003428Mitochondrial glycoproteinunknownSSF54529Mitochondrial glycoprotein MAM33-likecoord: 61..238
score: 2.49
NoneNo IPR availablePANTHERPTHR10826COMPLEMENT COMPONENT 1coord: 1..239
score: 3.5
NoneNo IPR availablePANTHERPTHR10826:SF14SUBFAMILY NOT NAMEDcoord: 1..239
score: 3.5

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G005940Cucurbita maxima (Rimu)cmacmaB382
CmaCh08G005940Cucurbita maxima (Rimu)cmacmaB440
CmaCh08G005940Cucurbita moschata (Rifu)cmacmoB896
CmaCh08G005940Cucurbita moschata (Rifu)cmacmoB905
CmaCh08G005940Cucurbita pepo (Zucchini)cmacpeB902
CmaCh08G005940Cucurbita pepo (Zucchini)cmacpeB923
CmaCh08G005940Cucumber (Chinese Long) v3cmacucB1048