CmaCh08G005940 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTATTTATCTATTATTATTTCTTAATTTAGTAGCGGACTGTGGGTGTGCTTAAACCCTAAACCCCAAGGAAGATCAATCTCCTCTTCGTCTTCCCCTCGATTCGAATTCATCACATCAATGGCGCGAGTGATTCGACCATTGAGAAAATGCCTTCAGTTTTCTTCTTCTTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCCGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCTTTCGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTTGAACGGCATCCTCCCGATCAGGTTGGCTTCTCTATTATTCTCTCTGCCGCGAGTTGAAATATGACATATGAGAAGTTCTAGACAAAGTTAATTTAGTGCCTATTGGATTATCGTAGTTCCTCAATTTTTGTATTGGAGCTCTGTAGTTAGTTTGGAAGAGTTCTCGATGTTAATAATTGCATGTATGGATGGGTTCTACCTTCGAAGTAACAGAAGCTTTATGAGTGTCCCCAAATTAACTGCACGCGAAAATTTCACGAACGTTCAGAAAATTGAGCATCGCCGTTGTTTAGTGGGCTGTTCTTCCGAGGTTCAGCTATTCTGTAGTAAAAAATTTCGATTGAATAATTTCGTCCTCCATGCTTTCCTTGAACTACTAACATCTCCGCAGGAGTGTTGTACTTTTAATTGGTTAGGTGATGTGGGATCAATCTCATTTTTCAGCCACTAACAATGCAAGTAAACTGTGGGTATTTGGAATTGGAATTTGCATTCAGATATTCTTGTTTCGATGCTTCATTCGCAAAGGCTAAACCACCATTAAACCTTAGCGGATTGGTTATGGTAAATTTAATCGCATATTACATTCAAATACTCTTCAATTGTCAGCTAGAAATTGGTACAAGGCCCCATAAGCAGATATTAGTGTTAATTGGAGAGAAAATAACATTATAAGTCCTGATACTACGTTGAATCACCACTGAAACATTAAACAGAATACTCAAGCTGTTGGTTTACATTAAATAGCTTTAATTGGTTTTGATTGTTTTCCAGTTTCGATTTTGAGATCTCTTCTCATTTTCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTACGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACACCTCCAGGGGAAGATGTGCTTCTTCACATTACCATTATTGTCAATATAAACAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGTATGATTTCCAACGCCCTTAAATATTTTTTGTACTCTGATTCTAAGTATGATGAATAGTAGTAGCAAATAATTACGTGCATATGATGTCGGTGACAATCTTCAGCTTATTGCTCTTATTTAAATATATCTCCTTGCCTCAATTATTAAATAGATGTTTCTTCCAGCTTCCTGAGAATTAATTTCGTGCACAGGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATGTGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAATTAATTGA ATTTATTTATCTATTATTATTTCTTAATTTAGTAGCGGACTGTGGGTGTGCTTAAACCCTAAACCCCAAGGAAGATCAATCTCCTCTTCGTCTTCCCCTCGATTCGAATTCATCACATCAATGGCGCGAGTGATTCGACCATTGAGAAAATGCCTTCAGTTTTCTTCTTCTTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCCGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCTTTCGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTTGAACGGCATCCTCCCGATCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTACGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACACCTCCAGGGGAAGATGTGCTTCTTCACATTACCATTATTGTCAATATAAACAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATGTGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAATTAATTGA ATGGCGCGAGTGATTCGACCATTGAGAAAATGCCTTCAGTTTTCTTCTTCTTCTTCTTCTTCTCACAAGGCTCTCATGTCGCAGGCGCACCGACTAAATCCCATTCCATTTCCTCCTGAAAACCCCCGCGTTCTCTTCAAGACACTGCGCCATTACATATCCGAGATGCGTAGATCTGCTTTCGAAGGCAGCATTCTCAGACTTCTCCGTAACGAAATCCGATATGAACTTGAACGGCATCCTCCCGATCAGCCTGTTACAAAATTTGGCGCCTTTACAATTGATGAAAGGCCAGGCGAGCAGTGGATCAGATTGGAAAGAGAGTACGGGGAGAATGAGAATATAAAGATTGAAGTGACCATGTTTGATCACGCTAGGACACCTCCAGGGGAAGATGTGCTTCTTCACATTACCATTATTGTCAATATAAACAAAAGAGATAGCAGTGAAGTTTTGGAGATTATGTGTTCAGCTTGGCCAAATGATCTAGAGATTGACAGGCTTTTGACACGCCGAGGTGAAAAGATGCCAGCTCAACCCTATGCTGGACCAGAATTCAAGGAATTGGATGATGACTTGCAAAACTCACTCTATGACTATCTTGAAGCAAGGGGGGTGGACGATCAGCTAGCTGTTTTCTTGCATAAATATGTGAAGAACAAGGATAAAACCGAATTCATTAGGTGGATGGAAACCGTAAAAGCATTCATTGAAATTAATTGA MARVIRPLRKCLQFSSSSSSSHKALMSQAHRLNPIPFPPENPRVLFKTLRHYISEMRRSAFEGSILRLLRNEIRYELERHPPDQPVTKFGAFTIDERPGEQWIRLEREYGENENIKIEVTMFDHARTPPGEDVLLHITIIVNINKRDSSEVLEIMCSAWPNDLEIDRLLTRRGEKMPAQPYAGPEFKELDDDLQNSLYDYLEARGVDDQLAVFLHKYVKNKDKTEFIRWMETVKAFIEIN
BLAST of CmaCh08G005940 vs. Swiss-Prot
Match: YB95_ARATH (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.1e-18 Identity = 68/243 (27.98%), Postives = 124/243 (51.03%), Query Frame = 1
BLAST of CmaCh08G005940 vs. Swiss-Prot
Match: Y2979_ARATH (Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana GN=At2g39790 PE=3 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08 Identity = 54/219 (24.66%), Postives = 103/219 (47.03%), Query Frame = 1
BLAST of CmaCh08G005940 vs. Swiss-Prot
Match: MAM33_YEAST (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM33 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TrEMBL
Match: A0A0A0K687_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432060 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 7.9e-101 Identity = 188/248 (75.81%), Postives = 210/248 (84.68%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TrEMBL
Match: M5WXV7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021707mg PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 8.8e-76 Identity = 152/254 (59.84%), Postives = 188/254 (74.02%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TrEMBL
Match: V4SJL5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026378mg PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70 Identity = 139/244 (56.97%), Postives = 183/244 (75.00%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TrEMBL
Match: A0A067DVD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026512mg PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.3e-70 Identity = 138/244 (56.56%), Postives = 183/244 (75.00%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TrEMBL
Match: A0A059C6T5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02483 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.4e-68 Identity = 137/226 (60.62%), Postives = 171/226 (75.66%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TAIR10
Match: AT1G15870.1 (AT1G15870.1 Mitochondrial glycoprotein family protein) HSP 1 Score: 238.8 bits (608), Expect = 3.4e-63 Identity = 127/250 (50.80%), Postives = 168/250 (67.20%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TAIR10
Match: AT1G80720.1 (AT1G80720.1 Mitochondrial glycoprotein family protein) HSP 1 Score: 234.6 bits (597), Expect = 6.5e-62 Identity = 108/188 (57.45%), Postives = 142/188 (75.53%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TAIR10
Match: AT4G31930.1 (AT4G31930.1 Mitochondrial glycoprotein family protein) HSP 1 Score: 177.9 bits (450), Expect = 7.2e-45 Identity = 82/187 (43.85%), Postives = 124/187 (66.31%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TAIR10
Match: AT3G55605.1 (AT3G55605.1 Mitochondrial glycoprotein family protein) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19 Identity = 56/195 (28.72%), Postives = 104/195 (53.33%), Query Frame = 1
BLAST of CmaCh08G005940 vs. TAIR10
Match: AT2G39795.1 (AT2G39795.1 Mitochondrial glycoprotein family protein) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19 Identity = 68/243 (27.98%), Postives = 124/243 (51.03%), Query Frame = 1
BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|449436176|ref|XP_004135870.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus]) HSP 1 Score: 374.8 bits (961), Expect = 1.1e-100 Identity = 188/248 (75.81%), Postives = 210/248 (84.68%), Query Frame = 1
BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|659122490|ref|XP_008461172.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo]) HSP 1 Score: 362.5 bits (929), Expect = 5.9e-97 Identity = 185/249 (74.30%), Postives = 206/249 (82.73%), Query Frame = 1
BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|595960041|ref|XP_007216847.1| (hypothetical protein PRUPE_ppa021707mg [Prunus persica]) HSP 1 Score: 291.6 bits (745), Expect = 1.3e-75 Identity = 152/254 (59.84%), Postives = 188/254 (74.02%), Query Frame = 1
BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|657944601|ref|XP_008375488.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Malus domestica]) HSP 1 Score: 289.7 bits (740), Expect = 4.8e-75 Identity = 150/253 (59.29%), Postives = 187/253 (73.91%), Query Frame = 1
BLAST of CmaCh08G005940 vs. NCBI nr
Match: gi|645245190|ref|XP_008228763.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Prunus mume]) HSP 1 Score: 283.9 bits (725), Expect = 2.6e-73 Identity = 149/257 (57.98%), Postives = 187/257 (72.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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