Cp4.1LG17g00870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g00870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionC2 calcium-dependent membrane targeting
LocationCp4.1LG17 : 141908 .. 142387 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTAAATACAGATCCCATGTGTTTAGACATTAATATAGTTTCAGCCAGAGGCCTTACTGGAGTTGACCCAGCGTCCAAACCCAAGCTATACGTCGTCGTTTCATTCTTCGGCGCCGCGGTGAACCAGCAGAGGGCTCGGACCAACGTGGACAAGGACGGCGGCGGAAATCCTACGTGGAACTTTGCAGTGAAATTCGCCGTCGACGTGGAGGCAGTAAAGCAAGGTATAGAGGGTAGTCTTGTCTTTGCTCTTAAATACGAGGATGGGAGGGGAGACAGAGATTTAGGGGAAGTCCACGTGTCGGTTGCGGAGCTTTTGCAGTCTGCTGGAGATGAAAAATCCATGCGATACGTTGCCGTTTCGTATCCGGTTAGAAAACCGTCGGGAGAGACGGTGGGCGTGTTGAATTTCGAATATAAATTTGGTGGTTCTCCGGCGAGTGATACACCGCCGGCTGGTTTCCCCACGAGGTAA

mRNA sequence

ATGGCTCTAAATACAGATCCCATGTGTTTAGACATTAATATAGTTTCAGCCAGAGGCCTTACTGGAGTTGACCCAGCGTCCAAACCCAAGCTATACGTCGTCGTTTCATTCTTCGGCGCCGCGGTGAACCAGCAGAGGGCTCGGACCAACGTGGACAAGGACGGCGGCGGAAATCCTACGTGGAACTTTGCAGTGAAATTCGCCGTCGACGTGGAGGCAGTAAAGCAAGGTATAGAGGGTAGTCTTGTCTTTGCTCTTAAATACGAGGATGGGAGGGGAGACAGAGATTTAGGGGAAGTCCACGTGTCGGTTGCGGAGCTTTTGCAGTCTGCTGGAGATGAAAAATCCATGCGATACGTTGCCGTTTCGTATCCGGTTAGAAAACCGTCGGGAGAGACGGTGGGCGTGTTGAATTTCGAATATAAATTTGGTGGTTCTCCGGCGAGTGATACACCGCCGGCTGGTTTCCCCACGAGGTAA

Coding sequence (CDS)

ATGGCTCTAAATACAGATCCCATGTGTTTAGACATTAATATAGTTTCAGCCAGAGGCCTTACTGGAGTTGACCCAGCGTCCAAACCCAAGCTATACGTCGTCGTTTCATTCTTCGGCGCCGCGGTGAACCAGCAGAGGGCTCGGACCAACGTGGACAAGGACGGCGGCGGAAATCCTACGTGGAACTTTGCAGTGAAATTCGCCGTCGACGTGGAGGCAGTAAAGCAAGGTATAGAGGGTAGTCTTGTCTTTGCTCTTAAATACGAGGATGGGAGGGGAGACAGAGATTTAGGGGAAGTCCACGTGTCGGTTGCGGAGCTTTTGCAGTCTGCTGGAGATGAAAAATCCATGCGATACGTTGCCGTTTCGTATCCGGTTAGAAAACCGTCGGGAGAGACGGTGGGCGTGTTGAATTTCGAATATAAATTTGGTGGTTCTCCGGCGAGTGATACACCGCCGGCTGGTTTCCCCACGAGGTAA

Protein sequence

MALNTDPMCLDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQRARTNVDKDGGGNPTWNFAVKFAVDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPVRKPSGETVGVLNFEYKFGGSPASDTPPAGFPTR
Homology
[Close]
BLAST of Cp4.1LG17g00870 vs. Swiss-Prot
Match: SRC2_SOYBN (Protein SRC2 OS=Glycine max GN=SRC2 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQRARTNVDKDGGGNPTWNFAVKFAV 69
           L++NI+SA+ +  V+  SK  +Y  VS  G  ++ Q A T+V KD G NPTWN+ VKF+V
Sbjct: 8   LELNIISAKDIKNVNLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSNPTWNYPVKFSV 67

Query: 70  DVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPVRKP 129
           +    K+    SL   L  +   GD  +G VHV + ELL + GD+ S R   VSY V K 
Sbjct: 68  NESLAKEN-RLSLEIKLISDRTLGDTVIGTVHVPLRELLDNPGDDSSFR--QVSYQVMKQ 127

Query: 130 SGETVGVLNFEYKFG---GSPASDTPPA 155
           S ++ G LNF YKFG    +PA+ TP A
Sbjct: 128 SRKSKGSLNFSYKFGEHVPAPAAKTPKA 152

[Close]
BLAST of Cp4.1LG17g00870 vs. Swiss-Prot
Match: SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15
Identity = 57/137 (41.61%), Postives = 74/137 (54.01%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQRARTNVDKDGGGNPTWNFAVKFAV 69
           LD+ I+SA  L  V    K  LY VVS  G A  +Q+  T VDKD G  P W   +K  V
Sbjct: 6   LDLTIISAEDLKDVQLIGKQDLYAVVSINGDARTKQK--TKVDKDCGTKPKWKHQMKLTV 65

Query: 70  DVEAVKQGIEGSLVFALKYEDG-RGDRDLGEVHVSVAELL-QSAGDEKSMRYVAVSYPVR 129
           D  A +     +LVF +  +    GD+ +GEV V V ELL Q+ GDE+      V+Y VR
Sbjct: 66  DDAAARDN-RLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKGDEEK----TVTYAVR 125

Query: 130 KPSGETVGVLNFEYKFG 145
            P+G+  G L F +KFG
Sbjct: 126 LPNGKAKGSLKFSFKFG 135

[Close]
BLAST of Cp4.1LG17g00870 vs. TrEMBL
Match: B9HSC2_POPTR (Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0010s02500g PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 71/142 (50.00%), Postives = 93/142 (65.49%), Query Frame = 1 

Query: 6   DPMCLDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQ---RARTNVDKDGGGNPTWN 65
           D   L+IN++SAR L  V+  SK  +Y VVS  G    QQ   + +T VD+DGG NPTWN
Sbjct: 2   DQRTLEINVISARDLKDVNYISKMDVYAVVSISGVDSKQQPKQKTKTPVDRDGGKNPTWN 61

Query: 66  FAVKFAVDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAV 125
           F +KF +   ++ +    SLVF LK E   GD+D+GEV+V + ELL SAGD KSM++  V
Sbjct: 62  FPIKFTIPETSLAEN-HLSLVFKLKCERALGDKDIGEVNVPIKELLDSAGDGKSMKF--V 121

Query: 126 SYPVRKPSGETVGVLNFEYKFG 145
           SY VRKPSG+  G +NF +KFG
Sbjct: 122 SYQVRKPSGKPKGEINFSFKFG 140

[Close]
BLAST of Cp4.1LG17g00870 vs. TrEMBL
Match: F6HE67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01400 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24
Identity = 72/165 (43.64%), Postives = 98/165 (59.39%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQRARTNVDKDGGGNPTWNFAVKFAV 69
           L+IN++SA+ L  V+  SK  +YVVVS  G + ++Q  +T VD+DGG NPTWNF +KF V
Sbjct: 6   LEINVISAKDLKDVNLISKMDVYVVVSINGDSRSKQ--KTPVDRDGGTNPTWNFPMKFTV 65

Query: 70  DVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPVRKP 129
           D  A +Q    +L F L+ E   GD+D+GEV+V + ELL  AG+ K +++  VSY VRKP
Sbjct: 66  DESAAQQN-RLTLSFKLRCERTLGDKDIGEVNVPIKELLDPAGESKPIQF--VSYQVRKP 125

Query: 130 SGETVGVLNFEYKFGGS-----------------PASDTPPAGFP 158
           SG+  G LN  YKFG                   PA+D P   +P
Sbjct: 126 SGKPKGELNLSYKFGEKSMSQSATKAQEPVMAYPPAADEPVTAYP 165

[Close]
BLAST of Cp4.1LG17g00870 vs. TrEMBL
Match: B9N523_POPTR (Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0034s00240g PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-24
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQ---QRARTNVDKDGGGNPTWNFAVK 69
           L+IN++SARGL  V+  SK  +Y VVS  G    Q   Q+ +T VD+ GG NPTWNF +K
Sbjct: 6   LEINVISARGLKDVNYISKMDVYAVVSISGDDSKQKPKQKTKTPVDRAGGKNPTWNFPIK 65

Query: 70  FAVDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPV 129
           F +    + +    +LV  LK E   GD+D+GEV+V V ELL SAGD KSM++  VSY V
Sbjct: 66  FTIPQTPLAEN-RLNLVCNLKCERALGDKDVGEVNVPVKELLDSAGDGKSMKF--VSYQV 125

Query: 130 RKPSGETVGVLNFEYKFGG 146
           RKPSG+  G ++F +KF G
Sbjct: 126 RKPSGKPKGEVSFSFKFSG 141

[Close]
BLAST of Cp4.1LG17g00870 vs. TrEMBL
Match: A0A067JYD4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18863 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-24
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVN-QQRARTNVDKDGGGNPTWNFAVKFA 69
           L+IN++SA+ L  V+  SK  +Y VVS  G +   +Q+ +T VD DGG NPTWNF  KF 
Sbjct: 6   LEINLISAKDLKDVNLFSKMDVYAVVSISGDSQQPKQKIKTPVDHDGGTNPTWNFPAKFT 65

Query: 70  VDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPVRK 129
           + +EA  Q     LV  L+ E   GD+D+GEV+V + ELL++ GD KSM++  VSY VRK
Sbjct: 66  I-LEAPAQQNRLILVINLRCERALGDKDIGEVNVPIKELLETMGDGKSMQF--VSYQVRK 125

Query: 130 PSGETVGVLNFEYKF 144
           PSG+  G LNF YKF
Sbjct: 126 PSGKPKGQLNFSYKF 137

[Close]
BLAST of Cp4.1LG17g00870 vs. TrEMBL
Match: A0A061ENR3_THECC (Soybean gene regulated by cold-2, putative OS=Theobroma cacao GN=TCM_021191 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23
Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 1 

Query: 11  DINIVSARGLTGVDPASKPKLYVVVSFFG-AAVNQQRARTNVDKDGGGNPTWNFAVKFAV 70
           +IN++SA+GL  V+   K  +Y +VS  G ++ ++Q+ +T VDKD G +PTWNF VKF +
Sbjct: 9   EINVISAKGLKNVNLIDKMDVYAIVSLKGDSSKDKQKTKTPVDKDCGKDPTWNFPVKFTI 68

Query: 71  DVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPVRKP 130
           D E++ Q    +L F +K E   GD++LG+V+V V ELL S  +  SM++  VSY VRKP
Sbjct: 69  D-ESLAQKNNLNLKFKIKCERILGDKELGQVNVPVKELLDSTSEGGSMKF--VSYQVRKP 128

Query: 131 SGETVGVLNFEYKFG 145
           SG+  G LNF YKFG
Sbjct: 129 SGKPEGTLNFSYKFG 140

[Close]
BLAST of Cp4.1LG17g00870 vs. TAIR10
Match: AT4G15755.1 (AT4G15755.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17
Identity = 49/142 (34.51%), Postives = 79/142 (55.63%), Query Frame = 1 

Query: 8   MCLDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQ-QRARTNVDKDGGGNPTWNFAVK 67
           + L++NI SAR L  V+  +K  ++  ++  G    + Q+A+T VD+ GG NPTWN  +K
Sbjct: 4   LTLELNINSARNLLNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQTIK 63

Query: 68  FAVDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSA-----GDEKSMRYVA 127
           F+VD  + + G   SLV  +      G++++G V++ + ELL +      GD        
Sbjct: 64  FSVDERSARGG-HSSLVMRVISRRVLGNKEIGRVNIPLLELLNATTPSFNGDGNDHEMKL 123

Query: 128 VSYPVRKPSGETVGVLNFEYKF 144
           +SY VR  SG+  G L+F Y+F
Sbjct: 124 MSYQVRTSSGKRSGSLSFSYRF 144

[Close]
BLAST of Cp4.1LG17g00870 vs. TAIR10
Match: AT1G09070.1 (AT1G09070.1 soybean gene regulated by cold-2)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 57/137 (41.61%), Postives = 74/137 (54.01%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQRARTNVDKDGGGNPTWNFAVKFAV 69
           LD+ I+SA  L  V    K  LY VVS  G A  +Q+  T VDKD G  P W   +K  V
Sbjct: 6   LDLTIISAEDLKDVQLIGKQDLYAVVSINGDARTKQK--TKVDKDCGTKPKWKHQMKLTV 65

Query: 70  DVEAVKQGIEGSLVFALKYEDG-RGDRDLGEVHVSVAELL-QSAGDEKSMRYVAVSYPVR 129
           D  A +     +LVF +  +    GD+ +GEV V V ELL Q+ GDE+      V+Y VR
Sbjct: 66  DDAAARDN-RLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKGDEEK----TVTYAVR 125

Query: 130 KPSGETVGVLNFEYKFG 145
            P+G+  G L F +KFG
Sbjct: 126 LPNGKAKGSLKFSFKFG 135

[Close]
BLAST of Cp4.1LG17g00870 vs. TAIR10
Match: AT3G16510.1 (AT3G16510.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 82.0 bits (201), Expect = 3.6e-16
Identity = 53/144 (36.81%), Postives = 76/144 (52.78%), Query Frame = 1 

Query: 8   MCLDINIVSARGLTGVDPASKPKLYVVVSFFGA-AVNQQRARTNVDKDGGGNPTWNFAVK 67
           + L++N+ SA+ L  V+  +K  +Y VV   G  +    + +T +D+ G   PTWN  VK
Sbjct: 4   LTLELNVYSAKDLENVNLITKMDVYAVVWITGDDSRKNHKEKTPIDRTGESEPTWNHTVK 63

Query: 68  FAVDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKS-------MRY 127
           F+VD     +G   +LV  L  +   GD+DLGEV V V ELL  +    S       MR+
Sbjct: 64  FSVDQRLAHEG-RLTLVVKLVCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQGMMRF 123

Query: 128 VAVSYPVRKPSGETVGVLNFEYKF 144
             V+Y VR P G+  G L F Y+F
Sbjct: 124 --VTYQVRTPFGKGQGSLTFSYRF 144

[Close]
BLAST of Cp4.1LG17g00870 vs. TAIR10
Match: AT4G15740.1 (AT4G15740.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-15
Identity = 52/153 (33.99%), Postives = 77/153 (50.33%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQ-QRARTNVDKDGGGNPTWNFAVKFA 69
           L++ IVSA  +  +D   K  +Y VVS  G    Q Q A+T +D DGG NPTWN  VKF+
Sbjct: 41  LELKIVSASDVNHIDATDKMDVYAVVSINGDTTQQKQAAKTPIDYDGGSNPTWNHTVKFS 100

Query: 70  VDVEAVKQGIEGSLVFALKY-EDGRGDRDLGEVHVSVAELLQS-------AGDEKSMRYV 129
           V+     +G+    V    Y  +G  D  LGEV+VSV +LL S        G+   M+  
Sbjct: 101 VNEREANEGLLTITVKLFSYWLEGDNDLYLGEVNVSVQDLLASNPIPPFTNGNINKMK-- 160

Query: 130 AVSYPVRKPSGETVGVLNFEYKFGGSPASDTPP 154
           +++ P++     T   ++  Y+F   P  +  P
Sbjct: 161 SMTCPIKATEKSTNTTVSLSYRFKPVPVEEFYP 191

[Close]
BLAST of Cp4.1LG17g00870 vs. TAIR10
Match: AT3G62780.1 (AT3G62780.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-11
Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFG--AAVNQQRARTNVDKDGGGNPTW-NFAVK 69
           L+IN+ SA+GL  V   SK  ++V V   G     + +  RT   +DGG +P W N  +K
Sbjct: 6   LEINVTSAKGLKKV---SKMDVFVAVKLSGDPKCSDHREQRTQAARDGGTSPKWSNDVMK 65

Query: 70  FAVDVEAVKQGIEGSLVFALKY-EDGRGDRDLGEVHVSVAELLQSAGDEKS-MRYVAVSY 129
           F +D + + +     + F +K  + G  D+D+GEVHV V ELL   G++K+  RY  V+Y
Sbjct: 66  FILD-QNLAEANRLVITFKIKCEQRGGVDKDIGEVHVQVKELLDHLGNDKTGQRY--VTY 125

Query: 130 PVRKPSGETVGVLNFEYKFGG 146
            + K   +    ++F Y F G
Sbjct: 126 QIGKSKAD----ISFTYSFTG 136

[Close]
BLAST of Cp4.1LG17g00870 vs. NCBI nr
Match: gi|659117176|ref|XP_008458461.1| (PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-38
Identity = 91/156 (58.33%), Postives = 112/156 (71.79%), Query Frame = 1 

Query: 8   MCLDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQ-RARTNVDKDGGGNPTWNFAVK 67
           M L+I I SAR L  ++P    +LYVVVS  G AVN+Q +A+T+VD+ GGGNPTWNF++K
Sbjct: 1   MALEIVIASARCLARINPTPNMRLYVVVSITGTAVNEQIKAQTDVDQHGGGNPTWNFSMK 60

Query: 68  FAVDVEAVKQGIEGSLVFALKYEDGR--GDRDLGEVHVSVAELLQSAGDEKSMR--YVAV 127
           F  DVE +KQ  +  +VFALK ED     ++DLGEVHVS+ ELL+S  D       YVAV
Sbjct: 61  F--DVEGLKQDFKAGIVFALKCEDHEKGNNKDLGEVHVSICELLKSVEDGNYFMRSYVAV 120

Query: 128 SYPVRKPSGETVGVLNFEYKFGGSPASDTPPAGFPT 159
           SYPV++PSGETV +LNF YKFGGSP SDTP  GF T
Sbjct: 121 SYPVKEPSGETVALLNFHYKFGGSPMSDTPVDGFAT 154

[Close]
BLAST of Cp4.1LG17g00870 vs. NCBI nr
Match: gi|224110568|ref|XP_002315561.1| (shock protein SRC2 [Populus trichocarpa])

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 71/142 (50.00%), Postives = 93/142 (65.49%), Query Frame = 1 

Query: 6   DPMCLDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQ---RARTNVDKDGGGNPTWN 65
           D   L+IN++SAR L  V+  SK  +Y VVS  G    QQ   + +T VD+DGG NPTWN
Sbjct: 2   DQRTLEINVISARDLKDVNYISKMDVYAVVSISGVDSKQQPKQKTKTPVDRDGGKNPTWN 61

Query: 66  FAVKFAVDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAV 125
           F +KF +   ++ +    SLVF LK E   GD+D+GEV+V + ELL SAGD KSM++  V
Sbjct: 62  FPIKFTIPETSLAEN-HLSLVFKLKCERALGDKDIGEVNVPIKELLDSAGDGKSMKF--V 121

Query: 126 SYPVRKPSGETVGVLNFEYKFG 145
           SY VRKPSG+  G +NF +KFG
Sbjct: 122 SYQVRKPSGKPKGEINFSFKFG 140

[Close]
BLAST of Cp4.1LG17g00870 vs. NCBI nr
Match: gi|743902368|ref|XP_011044520.1| (PREDICTED: actin cytoskeleton-regulatory complex protein pan-1-like [Populus euphratica])

HSP 1 Score: 125.9 bits (315), Expect = 6.1e-26
Identity = 69/142 (48.59%), Postives = 92/142 (64.79%), Query Frame = 1 

Query: 6   DPMCLDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQ---RARTNVDKDGGGNPTWN 65
           D   L+IN++SAR L  V+  SK  +Y VVS  G    QQ   + +T VD+ GG NPTWN
Sbjct: 2   DQRTLEINVISARDLKDVNYISKMDVYAVVSISGVDSKQQPKQKTKTPVDRAGGKNPTWN 61

Query: 66  FAVKFAVDVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAV 125
           F +KF +   ++ +    SLVF LK E   GD+D+GEV+V + ELL SAGD KSM++  V
Sbjct: 62  FPIKFTIPETSLAEN-RLSLVFKLKCERALGDKDIGEVNVPIKELLDSAGDGKSMKF--V 121

Query: 126 SYPVRKPSGETVGVLNFEYKFG 145
           SY VRKPSG+  G ++F +KFG
Sbjct: 122 SYQVRKPSGKPKGEISFSFKFG 140

[Close]
BLAST of Cp4.1LG17g00870 vs. NCBI nr
Match: gi|720043150|ref|XP_010269468.1| (PREDICTED: abl interactor homolog [Nelumbo nucifera])

HSP 1 Score: 124.0 bits (310), Expect = 2.3e-25
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQRARTNVDKDGGGNPTWNFAVKFAV 69
           LDI ++SA+ L  V+  SK  +Y VVS  G +  + + +T +DKDGG +P+WNF +KF V
Sbjct: 6   LDITVISAKDLKDVNLFSKMDVYAVVSLSGDS--RSKHKTPIDKDGGTSPSWNFPMKFTV 65

Query: 70  DVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPVRKP 129
           D  A KQ     LVF L+ +   GD+D+G+VHV V ELL + GD KS ++  VSY VRKP
Sbjct: 66  DEAAAKQN-RLMLVFELRCDRSLGDKDIGQVHVPVKELLDNTGDGKSAQF--VSYQVRKP 125

Query: 130 SGETVGVLNFEYKFG 145
           SG+  G LNF YKFG
Sbjct: 126 SGKPKGTLNFSYKFG 135

[Close]
BLAST of Cp4.1LG17g00870 vs. NCBI nr
Match: gi|225432286|ref|XP_002272904.1| (PREDICTED: cytokinesis protein sepA-like [Vitis vinifera])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 68/142 (47.89%), Postives = 93/142 (65.49%), Query Frame = 1 

Query: 10  LDINIVSARGLTGVDPASKPKLYVVVSFFGAAVNQQRARTNVDKDGGGNPTWNFAVKFAV 69
           L+IN++SA+ L  V+  SK  +YVVVS  G + ++Q+  T VD+DGG NPTWNF +KF V
Sbjct: 6   LEINVISAKDLKDVNLISKMDVYVVVSINGDSRSKQK--TPVDRDGGTNPTWNFPMKFTV 65

Query: 70  DVEAVKQGIEGSLVFALKYEDGRGDRDLGEVHVSVAELLQSAGDEKSMRYVAVSYPVRKP 129
           D  A +Q    +L F L+ E   GD+D+GEV+V + ELL  AG+ K +++  VSY VRKP
Sbjct: 66  DESAAQQN-RLTLSFKLRCERTLGDKDIGEVNVPIKELLDPAGESKPIQF--VSYQVRKP 125

Query: 130 SGETVGVLNFEYKFGGSPASDT 152
           SG+  G LN  YKFG    S +
Sbjct: 126 SGKPKGELNLSYKFGEKSMSQS 142

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g00870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SRC2_SOYBN1.8e-2243.24Protein SRC2 OS=Glycine max GN=SRC2 PE=2 SV=1[more]
SRC2_ARATH2.8e-1541.61Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1[more]
BLAST of Cp4.1LG17g00870 vs. TrEMBL
Match NameE-valueIdentityDescription
B9HSC2_POPTR1.3e-2750.00Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0010s02500g PE=4 SV=1[more]
F6HE67_VITVI1.0e-2443.64Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01400 PE=4 SV=... [more]
B9N523_POPTR1.8e-2448.92Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0034s00240g PE=4 SV=1[more]
A0A067JYD4_JATCU4.0e-2449.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18863 PE=4 SV=1[more]
A0A061ENR3_THECC1.2e-2347.41Soybean gene regulated by cold-2, putative OS=Theobroma cacao GN=TCM_021191 PE=4... [more]
BLAST of Cp4.1LG17g00870 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15755.11.9e-1734.51 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G09070.11.6e-1641.61 soybean gene regulated by cold-2[more]
AT3G16510.13.6e-1636.81 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT4G15740.13.9e-1533.99 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT3G62780.12.6e-1134.75 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
BLAST of Cp4.1LG17g00870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117176|ref|XP_008458461.1|1.4e-3858.33PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo][more]
gi|224110568|ref|XP_002315561.1|1.9e-2750.00shock protein SRC2 [Populus trichocarpa][more]
gi|743902368|ref|XP_011044520.1|6.1e-2648.59PREDICTED: actin cytoskeleton-regulatory complex protein pan-1-like [Populus eup... [more]
gi|720043150|ref|XP_010269468.1|2.3e-2549.63PREDICTED: abl interactor homolog [Nelumbo nucifera][more]
gi|225432286|ref|XP_002272904.1|1.2e-2447.89PREDICTED: cytokinesis protein sepA-like [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g00870.1Cp4.1LG17g00870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainGENE3DG3DSA:2.60.40.150coord: 9..116
score: 6.2
IPR000008C2 domainPFAMPF00168C2coord: 10..116
score: 3.2
IPR000008C2 domainSMARTSM00239C2_3ccoord: 9..116
score: 1.
IPR000008C2 domainPROFILEPS50004C2coord: 10..101
score: 9
IPR000008C2 domainunknownSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 6..145
score: 1.25
NoneNo IPR availablePANTHERPTHR32246FAMILY NOT NAMEDcoord: 1..154
score: 8.2
NoneNo IPR availablePANTHERPTHR32246:SF18C2 DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..154
score: 8.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g00870Cla009311Watermelon (97103) v1cpewmB340
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g00870Cucumber (Gy14) v2cgybcpeB202
Cp4.1LG17g00870Cucumber (Gy14) v2cgybcpeB348
Cp4.1LG17g00870Cucumber (Gy14) v2cgybcpeB787
Cp4.1LG17g00870Melon (DHL92) v3.6.1cpemedB331
Cp4.1LG17g00870Melon (DHL92) v3.6.1cpemedB368
Cp4.1LG17g00870Silver-seed gourdcarcpeB0102
Cp4.1LG17g00870Silver-seed gourdcarcpeB0859
Cp4.1LG17g00870Silver-seed gourdcarcpeB0985
Cp4.1LG17g00870Cucumber (Chinese Long) v3cpecucB0376
Cp4.1LG17g00870Cucumber (Chinese Long) v3cpecucB0379
Cp4.1LG17g00870Cucumber (Chinese Long) v3cpecucB0407
Cp4.1LG17g00870Wax gourdcpewgoB0390
Cp4.1LG17g00870Wax gourdcpewgoB0398
Cp4.1LG17g00870Cucurbita pepo (Zucchini)cpecpeB158
Cp4.1LG17g00870Cucurbita pepo (Zucchini)cpecpeB337
Cp4.1LG17g00870Cucurbita pepo (Zucchini)cpecpeB343
Cp4.1LG17g00870Cucumber (Gy14) v1cgycpeB0474
Cp4.1LG17g00870Cucumber (Gy14) v1cgycpeB0678
Cp4.1LG17g00870Cucurbita maxima (Rimu)cmacpeB270
Cp4.1LG17g00870Cucurbita maxima (Rimu)cmacpeB377
Cp4.1LG17g00870Cucurbita maxima (Rimu)cmacpeB822
Cp4.1LG17g00870Cucurbita maxima (Rimu)cmacpeB915
Cp4.1LG17g00870Cucurbita moschata (Rifu)cmocpeB233
Cp4.1LG17g00870Cucurbita moschata (Rifu)cmocpeB340
Cp4.1LG17g00870Cucurbita moschata (Rifu)cmocpeB776
Cp4.1LG17g00870Cucurbita moschata (Rifu)cmocpeB852
Cp4.1LG17g00870Wild cucumber (PI 183967)cpecpiB327
Cp4.1LG17g00870Wild cucumber (PI 183967)cpecpiB307
Cp4.1LG17g00870Cucumber (Chinese Long) v2cpecuB326
Cp4.1LG17g00870Cucumber (Chinese Long) v2cpecuB307
Cp4.1LG17g00870Bottle gourd (USVL1VR-Ls)cpelsiB247
Cp4.1LG17g00870Bottle gourd (USVL1VR-Ls)cpelsiB268
Cp4.1LG17g00870Watermelon (Charleston Gray)cpewcgB291
Cp4.1LG17g00870Watermelon (Charleston Gray)cpewcgB297
Cp4.1LG17g00870Watermelon (97103) v1cpewmB329
Cp4.1LG17g00870Melon (DHL92) v3.5.1cpemeB283
Cp4.1LG17g00870Melon (DHL92) v3.5.1cpemeB314