Cp4.1LG17g00090 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG17g00090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG17 : 456851 .. 459099 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTGAAAGAAGGTTGCTCTTTATTGCTGAAGATTCAGAAACCCCTGATGCCCTTCGTACTAAATTCAAGCCCCATCATCAATCCCCGTGAGCCCAATAAACAACACCTTCTGCACGAATCCGATGTGCTCAAACAATTGAAGAAGGAACGCAATCTTTCATCGGCATTACAATACTTCTGCGCTGTAGCCAATTCAAACGCTTTCAAACACACCGCATCCACGTATAAGCTCATGATTGAGAAGCTCGGCCGTGAATGTCAAATGGATGTGGTGCAATACATTTTACAGCAAATGAAGATGGATGGCGTAAATTGCTGCGAAGATTTGTTTGTAAGTATAATAAATAGTCACAAACGCGCAGGCTCCGCCGAGCAAGCGCTAAAGATGCTCTATCGGATTGGAGAGTTCGGGTGCAAGCCGACGGTGAAGATTTACAATCATCTTTTGGATGCGTTGCTGACTGAAAACAGGTTTCAGATGATCAATCCCGTGTATATTAATATGAAGAAAGACGGATTAATTCCTAATGTCTTTACATATAATATACTCTTGAAGGCACTTTGTAAGAATGATCGGGTTGATGCTGCACACAAGCTGTTTGTTGAAATGTCTAGTAAGGGCTGCCCACCCGATGCGGTTAGCTATACGACTATGGTGTCTTCACTTTGTAAAGCGGGTAAGATCGACGATGCTAGAGAGCTAGCAGGAAGATTTAAATCAAGTGTTCCTGTTTATAATGCTTTGATTGATGGGATGTGCAAAGAAGGAAGAGTTGAGGTAGCGATCAAGTTGTTAGGTGAAATGATGGTAAATGGAGTTGACCCTAATGTGATCTCATATTCGTGTATTATAAATTCTCTTTGCGAGTCGGGAAATGTTGAGTCGGCTTTTGCATTATTGGCTCAAATGTTTTCTAGAGGTTGTAGTGCCAATATCCAAACCTTTACGCCATTGATCAGGGGTTGTTTCATGAGAGGGGGATTCTATGAAGCTCTTGAATTGTGGAAGCTTATGATAAAGGATGGTTATGAGCCAAATGTAGTCGCTTACAACACTCTTATTCATGGTCTTTGCAATAGTGGGAGTTTGGTAGAAGCCTTACAAGTATGTGATCAGATGGAGAGGAGTGGCTGTCTCCCTAATGTAACTACTTACAGCACTCTAATTGATGGTTTTGCAAAAGCTGGTGATTTGGTTGGTGCATCTGAGACATGGAATAGAATGATATCCCATGGTTGTTGTCCTAATGTGGTGGCCTATACCTGCATGGTGGATGCCCTTTGTAAAAACTCGATGTTTGACCAAGCCAATTCTATTATGGAGAAGATGACTCTTGAGGGCTGTACTCCAAATACTGTAACATTTAACACGTTCATCAAAGGTTTGTGTAGAAATGGAAGAGTAGAATGGGCAATGAAAGTGCTTGATCGAATGCAAGGACATAGGTGTCTCCCTAATATCACAACTTACAATGAGTTACTTGATGCTCTATTCAGGACGAACAAGTACGTAGAGGCTTTTGGGCTTTTCCAGGAGATTGAAAAGGGAAATTTACAGCCAAACTTAGTGACTTATAATACCATTTTATATGGTTTTTCTCGAGCTGGCATGCTTGGAGAGGCGTTGCAACTTTTTTGTAAAGTACTTGTGGGGGGCACTACCCCGGATGCCATCACATATAATACTATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGACTGCAGTTCAGCTGGTGGAACGAGTTAGAACTATGAAGGAGTGGCGTCCAGATATCATCACATACACTAGCCTCATATGGGGTGCCTGCAATTGGATAAATATAGAAGAAGCCATTACTTATCTTCACAAGGCAATGAATCAAGGAATCTGCCCCAACTTTGCCACATGGAATGTATTGGTTCGGTGTTTCTTTGACTCTTTAGGTCATATGGGTCCAATTCACATTTTGGACGATATTCTGGGAAAGCGGTAAGATGGTGAGTTTGAAAGACGTTCATAAAACCAATTTCAGATGTAGTTGTGACCCCAGGTTACGTACACACTGAGAGATTTTTGCTTGAACACACTTGTAGAGTTCTTAAGGATGCTTGGGCAGGTTATGCTCTTCTTGGCTTGCTCTTTAAATTGAATAGCGGGGAATCAAATTCTATGGCACATGCCCAATTGGAGCAACATGCCAATGTTGAGTTTTTCTGGCACCTTCTTGTTATGATGGATGGTATCTTCTCGCCCGTGTGA

mRNA sequence

ATGTATTTGAAAGAAGGTTGCTCTTTATTGCTGAAGATTCAGAAACCCCTGATGCCCTTCGTACTAAATTCAAGCCCCATCATCAATCCCCGTGAGCCCAATAAACAACACCTTCTGCACGAATCCGATGTGCTCAAACAATTGAAGAAGGAACGCAATCTTTCATCGGCATTACAATACTTCTGCGCTGTAGCCAATTCAAACGCTTTCAAACACACCGCATCCACGTATAAGCTCATGATTGAGAAGCTCGGCCGTGAATGTCAAATGGATGTGGTGCAATACATTTTACAGCAAATGAAGATGGATGGCGTAAATTGCTGCGAAGATTTGTTTGTAAGTATAATAAATAGTCACAAACGCGCAGGCTCCGCCGAGCAAGCGCTAAAGATGCTCTATCGGATTGGAGAGTTCGGGTGCAAGCCGACGGTGAAGATTTACAATCATCTTTTGGATGCGTTGCTGACTGAAAACAGGTTTCAGATGATCAATCCCGTGTATATTAATATGAAGAAAGACGGATTAATTCCTAATGTCTTTACATATAATATACTCTTGAAGGCACTTTGTAAGAATGATCGGGTTGATGCTGCACACAAGCTGTTTGTTGAAATGTCTAGTAAGGGCTGCCCACCCGATGCGGTTAGCTATACGACTATGGTGTCTTCACTTTGTAAAGCGGGTAAGATCGACGATGCTAGAGAGCTAGCAGGAAGATTTAAATCAAGTGTTCCTGTTTATAATGCTTTGATTGATGGGATGTGCAAAGAAGGAAGAGTTGAGGTAGCGATCAAGTTGTTAGGTGAAATGATGGTAAATGGAGTTGACCCTAATGTGATCTCATATTCGTGTATTATAAATTCTCTTTGCGAGTCGGGAAATGTTGAGTCGGCTTTTGCATTATTGGCTCAAATGTTTTCTAGAGGTTGTAGTGCCAATATCCAAACCTTTACGCCATTGATCAGGGGTTGTTTCATGAGAGGGGGATTCTATGAAGCTCTTGAATTGTGGAAGCTTATGATAAAGGATGGTTATGAGCCAAATGTAGTCGCTTACAACACTCTTATTCATGGTCTTTGCAATAGTGGGAGTTTGGTAGAAGCCTTACAAGTATGTGATCAGATGGAGAGGAGTGGCTGTCTCCCTAATGTAACTACTTACAGCACTCTAATTGATGGTTTTGCAAAAGCTGGTGATTTGGTTGGTGCATCTGAGACATGGAATAGAATGATATCCCATGGTTGTTGTCCTAATGTGGTGGCCTATACCTGCATGGTGGATGCCCTTTGTAAAAACTCGATGTTTGACCAAGCCAATTCTATTATGGAGAAGATGACTCTTGAGGGCTGTACTCCAAATACTGTAACATTTAACACGTTCATCAAAGGTTTGTGTAGAAATGGAAGAGTAGAATGGGCAATGAAAGTGCTTGATCGAATGCAAGGACATAGGTGTCTCCCTAATATCACAACTTACAATGAGTTACTTGATGCTCTATTCAGGACGAACAAGTACGTAGAGGCTTTTGGGCTTTTCCAGGAGATTGAAAAGGGAAATTTACAGCCAAACTTAGTGACTTATAATACCATTTTATATGGTTTTTCTCGAGCTGGCATGCTTGGAGAGGCGTTGCAACTTTTTTGTAAAGTACTTGTGGGGGGCACTACCCCGGATGCCATCACATATAATACTATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGACTGCAGTTCAGCTGGTGGAACGAGTTAGAACTATGAAGGAGTGGCGTCCAGATATCATCACATACACTAGCCTCATATGGGGTGCCTGCAATTGGATAAATATAGAAGAAGCCATTACTTATCTTCACAAGGCAATGAATCAAGGAATCTGCCCCAACTTTGCCACATGGAATGTATTGGTTCGGTGTTTCTTTGACTCTTTAGGTCATATGGGTCCAATTCACATTTTGGACGATATTCTGGGAAAGCGAGTTCTTAAGGATGCTTGGGCAGGTTATGCTCTTCTTGGCTTGCTCTTTAAATTGAATAGCGGGGAATCAAATTCTATGGCACATGCCCAATTGGAGCAACATGCCAATGTTGAGTTTTTCTGGCACCTTCTTGTTATGATGGATGGTATCTTCTCGCCCGTGTGA

Coding sequence (CDS)

ATGTATTTGAAAGAAGGTTGCTCTTTATTGCTGAAGATTCAGAAACCCCTGATGCCCTTCGTACTAAATTCAAGCCCCATCATCAATCCCCGTGAGCCCAATAAACAACACCTTCTGCACGAATCCGATGTGCTCAAACAATTGAAGAAGGAACGCAATCTTTCATCGGCATTACAATACTTCTGCGCTGTAGCCAATTCAAACGCTTTCAAACACACCGCATCCACGTATAAGCTCATGATTGAGAAGCTCGGCCGTGAATGTCAAATGGATGTGGTGCAATACATTTTACAGCAAATGAAGATGGATGGCGTAAATTGCTGCGAAGATTTGTTTGTAAGTATAATAAATAGTCACAAACGCGCAGGCTCCGCCGAGCAAGCGCTAAAGATGCTCTATCGGATTGGAGAGTTCGGGTGCAAGCCGACGGTGAAGATTTACAATCATCTTTTGGATGCGTTGCTGACTGAAAACAGGTTTCAGATGATCAATCCCGTGTATATTAATATGAAGAAAGACGGATTAATTCCTAATGTCTTTACATATAATATACTCTTGAAGGCACTTTGTAAGAATGATCGGGTTGATGCTGCACACAAGCTGTTTGTTGAAATGTCTAGTAAGGGCTGCCCACCCGATGCGGTTAGCTATACGACTATGGTGTCTTCACTTTGTAAAGCGGGTAAGATCGACGATGCTAGAGAGCTAGCAGGAAGATTTAAATCAAGTGTTCCTGTTTATAATGCTTTGATTGATGGGATGTGCAAAGAAGGAAGAGTTGAGGTAGCGATCAAGTTGTTAGGTGAAATGATGGTAAATGGAGTTGACCCTAATGTGATCTCATATTCGTGTATTATAAATTCTCTTTGCGAGTCGGGAAATGTTGAGTCGGCTTTTGCATTATTGGCTCAAATGTTTTCTAGAGGTTGTAGTGCCAATATCCAAACCTTTACGCCATTGATCAGGGGTTGTTTCATGAGAGGGGGATTCTATGAAGCTCTTGAATTGTGGAAGCTTATGATAAAGGATGGTTATGAGCCAAATGTAGTCGCTTACAACACTCTTATTCATGGTCTTTGCAATAGTGGGAGTTTGGTAGAAGCCTTACAAGTATGTGATCAGATGGAGAGGAGTGGCTGTCTCCCTAATGTAACTACTTACAGCACTCTAATTGATGGTTTTGCAAAAGCTGGTGATTTGGTTGGTGCATCTGAGACATGGAATAGAATGATATCCCATGGTTGTTGTCCTAATGTGGTGGCCTATACCTGCATGGTGGATGCCCTTTGTAAAAACTCGATGTTTGACCAAGCCAATTCTATTATGGAGAAGATGACTCTTGAGGGCTGTACTCCAAATACTGTAACATTTAACACGTTCATCAAAGGTTTGTGTAGAAATGGAAGAGTAGAATGGGCAATGAAAGTGCTTGATCGAATGCAAGGACATAGGTGTCTCCCTAATATCACAACTTACAATGAGTTACTTGATGCTCTATTCAGGACGAACAAGTACGTAGAGGCTTTTGGGCTTTTCCAGGAGATTGAAAAGGGAAATTTACAGCCAAACTTAGTGACTTATAATACCATTTTATATGGTTTTTCTCGAGCTGGCATGCTTGGAGAGGCGTTGCAACTTTTTTGTAAAGTACTTGTGGGGGGCACTACCCCGGATGCCATCACATATAATACTATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGACTGCAGTTCAGCTGGTGGAACGAGTTAGAACTATGAAGGAGTGGCGTCCAGATATCATCACATACACTAGCCTCATATGGGGTGCCTGCAATTGGATAAATATAGAAGAAGCCATTACTTATCTTCACAAGGCAATGAATCAAGGAATCTGCCCCAACTTTGCCACATGGAATGTATTGGTTCGGTGTTTCTTTGACTCTTTAGGTCATATGGGTCCAATTCACATTTTGGACGATATTCTGGGAAAGCGAGTTCTTAAGGATGCTTGGGCAGGTTATGCTCTTCTTGGCTTGCTCTTTAAATTGAATAGCGGGGAATCAAATTCTATGGCACATGCCCAATTGGAGCAACATGCCAATGTTGAGTTTTTCTGGCACCTTCTTGTTATGATGGATGGTATCTTCTCGCCCGTGTGA

Protein sequence

MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLHESDVLKQLKKERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITYTSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDILGKRVLKDAWAGYALLGLLFKLNSGESNSMAHAQLEQHANVEFFWHLLVMMDGIFSPV
BLAST of Cp4.1LG17g00090 vs. Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 1.3e-205
Identity = 355/663 (53.54%), Postives = 476/663 (71.79%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN---PREPNKQHLLHESDVLKQLKKERNLSSA 60
           MYLKEGCSLLLK+QKPL+PFVLN++  +N      PN   +  E DV+K+L++E  +  A
Sbjct: 1   MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEI-KELDVVKRLRQESCVPLA 60

Query: 61  LQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIIN 120
           L +F ++ANSN FKHT  T+++MI KL  + Q+D VQY+LQQMK+ G +C EDLF+S+I+
Sbjct: 61  LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 120

Query: 121 SHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIP 180
            +++ G AE+A++M YRI EFGC P+VKIYNH+LD LL ENR QMI  VY +MK+DG  P
Sbjct: 121 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 180

Query: 181 NVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELA 240
           NVFTYN+LLKALCKN++VD A KL VEMS+KGC PDAVSYTT++SS+C+ G + + RELA
Sbjct: 181 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA 240

Query: 241 GRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVES 300
            RF+  V VYNALI+G+CKE   + A +L+ EM+  G+ PNVISYS +IN LC SG +E 
Sbjct: 241 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 300

Query: 301 AFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKD-GYEPNVVAYNTLI 360
           AF+ L QM  RGC  NI T + L++GCF+RG  ++AL+LW  MI+  G +PNVVAYNTL+
Sbjct: 301 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 360

Query: 361 HGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCC 420
            G C+ G++V+A+ V   ME  GC PN+ TY +LI+GFAK G L GA   WN+M++ GCC
Sbjct: 361 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 420

Query: 421 PNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNVV YT MV+ALC++S F +A S++E M+ E C P+  TFN FIKGLC  GR++WA KV
Sbjct: 421 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 480

Query: 481 LDRM-QGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFS 540
             +M Q HRC PNI TYNELLD L + N+  EA+GL +EI    ++ +  TYNT+L+G  
Sbjct: 481 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 540

Query: 541 RAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRT-MKEWRPD 600
            AG+ G ALQL  K++V G +PD IT N +I AYCKQGK + A Q+++ V    ++WRPD
Sbjct: 541 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 600

Query: 601 IITYTSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILD 658
           +I+YT++IWG C     E+ +  L + ++ GI P+ ATW+VL+ CF           ILD
Sbjct: 601 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF-----------ILD 651

BLAST of Cp4.1LG17g00090 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.2e-94
Identity = 200/631 (31.70%), Postives = 332/631 (52.61%), Query Frame = 1

Query: 14  QKPLMPFVLNSSPIINPREPNKQHLLHESDVLKQLKKERNLSSALQYFCAVANSNAFKHT 73
           +K L PF L+S         N  H +    + K L+   N+S++++ F    + N ++H+
Sbjct: 58  EKLLKPFDLDSLR-------NSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHS 117

Query: 74  ASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKMLY 133
              Y+++I KLG   +   +  +L QMK +G+   E LF+SI+  + +AG   Q  +++ 
Sbjct: 118 FDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 177

Query: 134 RIGE-FGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPNVFTYNILLKALCKN 193
            +   + C+PT K YN +L+ L++ N  ++   V+ +M    + P +FT+ +++KA C  
Sbjct: 178 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 237

Query: 194 DRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGR--FKSSVP---VY 253
           + +D+A  L  +M+  GC P++V Y T++ SL K  ++++A +L         VP    +
Sbjct: 238 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 297

Query: 254 NALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESAFALLAQMFS 313
           N +I G+CK  R+  A K++  M++ G  P+ I+Y  ++N LC+ G V++A      +F 
Sbjct: 298 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFY 357

Query: 314 RGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKD-GYEPNVVAYNTLIHGLCNSGSLV 373
           R     I  F  LI G    G   +A  +   M+   G  P+V  YN+LI+G    G + 
Sbjct: 358 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 417

Query: 374 EALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMV 433
            AL+V   M   GC PNV +Y+ L+DGF K G +  A    N M + G  PN V + C++
Sbjct: 418 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 477

Query: 434 DALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHRCL 493
            A CK     +A  I  +M  +GC P+  TFN+ I GLC    ++ A+ +L  M     +
Sbjct: 478 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 537

Query: 494 PNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQL 553
            N  TYN L++A  R  +  EA  L  E+       + +TYN+++ G  RAG + +A  L
Sbjct: 538 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 597

Query: 554 FCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITYTSLIWGAC 613
           F K+L  G  P  I+ N +I+  C+ G V+ AV+  ++   ++   PDI+T+ SLI G C
Sbjct: 598 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF-QKEMVLRGSTPDIVTFNSLINGLC 657

Query: 614 NWINIEEAITYLHKAMNQGICPNFATWNVLV 638
               IE+ +T   K   +GI P+  T+N L+
Sbjct: 658 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676

BLAST of Cp4.1LG17g00090 vs. Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.3e-80
Identity = 169/604 (27.98%), Postives = 308/604 (50.99%), Query Frame = 1

Query: 48  LKKERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMD-GVN 107
           +K +++   AL+ F ++     FKHT STY+ +IEKLG   + + ++ +L  M+ + G +
Sbjct: 14  IKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNH 73

Query: 108 CCEDLFVSIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPV 167
             E ++V  + ++ R G  ++A+ +  R+  + C+PTV  YN ++  L+    F   + V
Sbjct: 74  MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV 133

Query: 168 YINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCK 227
           Y+ M+  G+ P+V+++ I +K+ CK  R  AA +L   MSS+GC  + V+Y T+V    +
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193

Query: 228 AGKIDDARELAGRFKSS-----VPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVIS 287
                +  EL G+  +S     +  +N L+  +CK+G V+   KLL +++  GV PN+ +
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253

Query: 288 YSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMI 347
           Y+  I  LC+ G ++ A  ++  +  +G   ++ T+  LI G      F EA      M+
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313

Query: 348 KDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLV 407
            +G EP+   YNTLI G C  G +  A ++      +G +P+  TY +LIDG    G+  
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373

Query: 408 GASETWNRMISHGCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFI 467
            A   +N  +  G  PNV+ Y  ++  L    M  +A  +  +M+ +G  P   TFN  +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433

Query: 468 KGLCRNGRVEWAMKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQ 527
            GLC+ G V  A  ++  M      P+I T+N L+       K   A  +   +    + 
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493

Query: 528 PNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQL 587
           P++ TYN++L G  +     + ++ +  ++  G  P+  T+N ++ + C+  K+  A+ L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553

Query: 588 VERVRTMKEWRPDIITYTSLIWGACNWINIEEAITYLHKAMN-QGICPNFATWNVLVRCF 645
           +E ++  K   PD +T+ +LI G C   +++ A T   K      +  +  T+N+++  F
Sbjct: 554 LEEMKN-KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 613

BLAST of Cp4.1LG17g00090 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.0e-80
Identity = 176/593 (29.68%), Postives = 302/593 (50.93%), Query Frame = 1

Query: 44  VLKQLKKERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMD 103
           +L  L+ + + S+AL+ F   +    F    + Y+ ++ +LGR    D ++ IL+ MK  
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 104 GVNCCEDLFVSIINSHKRAGSAEQALKML-YRIGEFGCKPTVKIYNHLLDALLTENRFQM 163
                   F+ +I S+ +    ++ L ++ + I EFG KP    YN +L+ L+  N  ++
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172

Query: 164 INPVYINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVS 223
           +   +  M   G+ P+V T+N+L+KALC+  ++  A  +  +M S G  PD  ++TT++ 
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232

Query: 224 SLCKAGKIDDARELA------GRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMM-VNGV 283
              + G +D A  +       G   S+V V N ++ G CKEGRVE A+  + EM   +G 
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGF 292

Query: 284 DPNVISYSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALE 343
            P+  +++ ++N LC++G+V+ A  ++  M   G   ++ T+  +I G    G   EA+E
Sbjct: 293 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 352

Query: 344 LWKLMIKDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFA 403
           +   MI     PN V YNTLI  LC    + EA ++   +   G LP+V T+++LI G  
Sbjct: 353 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 412

Query: 404 KAGDLVGASETWNRMISHGCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTV 463
              +   A E +  M S GC P+   Y  ++D+LC     D+A +++++M L GC  + +
Sbjct: 413 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 472

Query: 464 TFNTFIKGLCRNGRVEWAMKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEI 523
           T+NT I G C+  +   A ++ D M+ H    N  TYN L+D L ++ +  +A  L  ++
Sbjct: 473 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 532

Query: 524 EKGNLQPNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKV 583
                +P+  TYN++L  F R G + +A  +   +   G  PD +TY T+I   CK G+V
Sbjct: 533 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 592

Query: 584 KTAVQLVERVRTMKEWRPDIITYTSLIWGACNWINIEEAITYLHKAMNQGICP 629
           + A +L+  ++ MK        Y  +I G        EAI    + + Q   P
Sbjct: 593 EVASKLLRSIQ-MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

BLAST of Cp4.1LG17g00090 vs. Swiss-Prot
Match: PPR98_ARATH (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.5e-79
Identity = 175/550 (31.82%), Postives = 286/550 (52.00%), Query Frame = 1

Query: 54  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFV 113
           L  A+  F  +  S  F       KL+   + +  + D+V    ++M++ GV+     + 
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLL-SAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 105

Query: 114 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKD 173
            +IN   R      AL +L ++ + G  P++   N LL+     NR      +   M + 
Sbjct: 106 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 165

Query: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 233
           G  P+  T+  L+  L ++++   A  L   M  KGC PD V+Y  +++ LCK G+ D A
Sbjct: 166 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 225

Query: 234 RELA-----GRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINS 293
             L      G+ ++ V +Y+ +ID +CK   V+ A+ L  EM   G+ P+V +YS +I+ 
Sbjct: 226 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 285

Query: 294 LCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPN 353
           LC  G    A  LL+ M  R  + N+ TF  LI      G   EA +L+  MI+   +PN
Sbjct: 286 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 345

Query: 354 VVAYNTLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWN 413
           +V YN+LI+G C    L EA Q+   M    CLP+V TY+TLI+GF KA  +V   E + 
Sbjct: 346 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 405

Query: 414 RMISHGCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNG 473
            M   G   N V YT ++    + S  D A  + ++M  +G  PN +T+NT + GLC+NG
Sbjct: 406 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 465

Query: 474 RVEWAMKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYN 533
           ++E AM V + +Q  +  P+I TYN + + + +  K  + + LF  +    ++P+++ YN
Sbjct: 466 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 525

Query: 534 TILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTM 593
           T++ GF + G+  EA  LF K+   G  PD+ TYNT+I A+ + G    + +L++ +R+ 
Sbjct: 526 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 585

Query: 594 KEWRPDIITY 599
           + +  D  TY
Sbjct: 586 R-FAGDASTY 593

BLAST of Cp4.1LG17g00090 vs. TrEMBL
Match: A0A0A0KCK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G324890 PE=4 SV=1)

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 568/659 (86.19%), Postives = 613/659 (93.02%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLHESDVLKQLKKERNLSSALQY 60
           MYLKEG SLL+KIQKPL+PFVLNS+PIINPR+PNKQ LL ESDVLK+LK +RNLSS L +
Sbjct: 1   MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGF 60

Query: 61  FCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINSHK 120
           F A+ANSNAF+HTASTY++MIE+LGREC+MD+VQYILQQMKMDG+NCCEDLF+ IIN +K
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 121 RAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPNVF 180
           R GSAEQALKM YRIGEFGCKPTV+IYNHLLDALL+EN+FQMINP+Y NMKKDGLIPNVF
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 181 TYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF 240
           TYNILLKALCKNDRVDAAHKLFVEMS+KGCPPDAV+YTTMVSSLCKAGKIDDARELAGRF
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 241 KSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESAFA 300
           K SVPVYNALIDGMCKEGR+EVAIKLLGEMM NGVDPNV+SYSCIINSLC SGNVE AFA
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 301 LLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHGLC 360
           L AQMF RGC ANI TFTPLI+GCFMRG  YEAL+LWKLMI+DG EPNVVAYNTLIHGLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 361 NSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVV 420
           ++GSL EALQVCDQM+RSGCLPNVTTYS LIDGFAK+GDLVGASETWNRMISHGC PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 421 AYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRM 480
            YTCMVD LCKNSMFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RM
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 481 QGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGML 540
           QGH CLPNITTYNELLDALFR NKY EAFGLFQEIE  NLQPNLVTYNT+LYGFSRAGM+
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 541 GEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITYTS 600
           GEALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEW PDIITYTS
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 601 LIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDILGK 660
           LIWGACNW+NIEEA+ +L KA+NQGICPNFATWN LVRCFFDSLGHMGPIHILDDIL K
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659

BLAST of Cp4.1LG17g00090 vs. TrEMBL
Match: V4S1G4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004501mg PE=4 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 1.5e-256
Identity = 427/661 (64.60%), Postives = 534/661 (80.79%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINP-REPNKQHLLHESDVLKQLKKERNLSSALQ 60
           MYLK+GCSL+LK QKP +PFVLN++PI N   + NK   + E  V K+L++E N++SAL 
Sbjct: 1   MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENKYTHVDEFRVSKRLRQEPNIASALN 60

Query: 61  YFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINSH 120
           YF ++ANSN FKHTA TY++MIEKLG +C++D VQY+LQQMK++GV+C E +FVS+INS+
Sbjct: 61  YFKSIANSNTFKHTALTYQVMIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFVSVINSY 120

Query: 121 KRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPNV 180
           +R G AEQALKM YRI EFG KPTVKIYNH+LDALL ENRF MINP+Y NMK+DG+ PNV
Sbjct: 121 RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 180

Query: 181 FTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGR 240
           FTYNILLKALCKN+RVD A+KL VEM +KGC PDAVSYTT+VSS+CK G++++ARELA R
Sbjct: 181 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSMCKLGQVEEARELAMR 240

Query: 241 FKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESAF 300
           F S V VYNALI+G+CKE R+E A  LL EM+  G+DPNVI+YS II+SLC+ GNVE++ 
Sbjct: 241 FGSGVSVYNALINGLCKEHRIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 300

Query: 301 ALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHGL 360
            +L QMF RGC+ NI +FT L++G  + G  +EA +LW  MI++G+ PNVVAY+TLIHGL
Sbjct: 301 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 360

Query: 361 CNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNV 420
           C++GS+ EA+ V  QME + C PNVTTYS LIDGFAKAG+L+GAS+ WNRMIS+GC PNV
Sbjct: 361 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 420

Query: 421 VAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDR 480
           VAYTCMV  LC+N+MF QA+S++EKM  E C PNTVTFNTFIKGLC  GRV+WAMK+LD+
Sbjct: 421 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 480

Query: 481 MQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGM 540
           M+ + CLPNITTYNELLD L R N+  EAF L  EIEK  +Q N+VTYNTIL+G  RAGM
Sbjct: 481 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 540

Query: 541 LGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITYT 600
           + EA QL  K+L+ GT  DAIT+N +I+AYCKQGKV  A+QL++R+R   EW PDII+YT
Sbjct: 541 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 600

Query: 601 SLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDILGK 660
           SL+WG CN   ++EA  YL K +N+GICPNFATWNVLVR  F +LGH+GP++ILDDI+  
Sbjct: 601 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 660

BLAST of Cp4.1LG17g00090 vs. TrEMBL
Match: A0A067JVP2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19037 PE=4 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 2.5e-251
Identity = 416/661 (62.93%), Postives = 525/661 (79.43%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN----PREPNKQHLLHESDVLKQLKKERNLSS 60
           MYLKEG SLLLK++KP +PFVLN++PI+N    PR    +  L E +VLK+L+ E ++  
Sbjct: 1   MYLKEGHSLLLKVRKPAIPFVLNTNPILNSNNKPRNEQNEANLKEYEVLKRLRSESSIVL 60

Query: 61  ALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSII 120
           A+ YF ++ANS AF+HT  TY+ MIEKLG E  +D VQY+LQQMK++G+ C EDLF+S+I
Sbjct: 61  AVDYFKSIANSQAFQHTPLTYQTMIEKLGIEGDVDGVQYLLQQMKLEGICCSEDLFISVI 120

Query: 121 NSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLI 180
           N+++R G AEQALK  YRIGE GCKPTVKIYNHLLDALL+ENRFQMINP+Y NMK+DG+ 
Sbjct: 121 NTYRRVGLAEQALKTFYRIGELGCKPTVKIYNHLLDALLSENRFQMINPIYSNMKRDGME 180

Query: 181 PNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDAREL 240
           PNV+TYNILLKALCKN+R+D A KL VEMS+KGC PD VSYTT++SS+CK GK+++AR+L
Sbjct: 181 PNVYTYNILLKALCKNNRIDGACKLLVEMSNKGCNPDVVSYTTVISSMCKLGKVEEARKL 240

Query: 241 AGRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVE 300
           A RF+ SVP+YNALI G CKE R++ A +LLG+M+  G++PNVI+YS +IN L   GNVE
Sbjct: 241 AMRFQPSVPIYNALIQGFCKEYRIKEAFQLLGQMVDKGIEPNVITYSTVINFLAHVGNVE 300

Query: 301 SAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLI 360
           SA A+ A+MF RGCS NI TFT LI+G F+ G  YEAL++W  MI++G+EPN+VAYNTLI
Sbjct: 301 SALAVWAKMFVRGCSPNIHTFTSLIKGYFLGGRVYEALDIWNRMIQEGFEPNIVAYNTLI 360

Query: 361 HGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCC 420
           HGLC+ G   EA  V  +ME +GC PNVTTYS LIDGFA+A D VGASETWNRM+++GC 
Sbjct: 361 HGLCSHGKTREAFSVSLKMEGNGCSPNVTTYSALIDGFAEADDFVGASETWNRMMTNGCI 420

Query: 421 PNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNVV YTCMVD LC+NSMF+QA  ++EKM  + C PNT+TFN FIKGLC +G VEWA K+
Sbjct: 421 PNVVVYTCMVDVLCRNSMFNQAQCLIEKMVNDNCPPNTITFNIFIKGLCCHGSVEWAKKM 480

Query: 481 LDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSR 540
           L++M  + C PN+TTYNELL+ LF+ N+  EA GL +EIE+  ++PNLVT+NTIL GF  
Sbjct: 481 LNQMGKYGCSPNVTTYNELLNGLFKENRTKEALGLIREIEENGIEPNLVTFNTILSGFCH 540

Query: 541 AGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDII 600
           A M  EAL+L  K+L+ G  PDAITYNT+I+AYCKQGK KTA++LV+R+    EW PDII
Sbjct: 541 AEMFEEALKLLGKMLIVGLKPDAITYNTLIYAYCKQGKAKTAIKLVDRLSARGEWYPDII 600

Query: 601 TYTSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDI 658
             TSL+WG CN I ++EAI Y  K +++GICPN ATWNVLVR  F+SLGH+GPI+ILDDI
Sbjct: 601 ACTSLLWGICNQIGVDEAIRYFGKMLDEGICPNVATWNVLVRGLFNSLGHLGPIYILDDI 660

BLAST of Cp4.1LG17g00090 vs. TrEMBL
Match: B9HX52_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0010s15860g PE=4 SV=2)

HSP 1 Score: 864.8 bits (2233), Expect = 7.5e-248
Identity = 416/659 (63.13%), Postives = 520/659 (78.91%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINP--REPNKQHLLHESDVLKQLKKERNLSSAL 60
           MYLKEGCSLLLK QKPL+PFVLN+   INP   E    +LL ES+VL +LK E N+  AL
Sbjct: 1   MYLKEGCSLLLKKQKPLVPFVLNT---INPLQNEQKDLNLLKESEVLNKLKNEPNILLAL 60

Query: 61  QYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINS 120
            +F ++ANSN+FKHT  TY  MI++LG E  +D +QY+LQ MK++G++C EDLFV +IN+
Sbjct: 61  HFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINA 120

Query: 121 HKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPN 180
           ++RAG AEQALK  YRIGEFGCKP+VKIYNH+LDALL+EN+FQMIN +Y NMK+DG+  N
Sbjct: 121 YRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELN 180

Query: 181 VFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAG 240
           V+TYN+LLKALCKN+RVDAA KL  EMS KGC PDAVSYTT+VSS+C+ GK+++AREL+ 
Sbjct: 181 VYTYNMLLKALCKNNRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 240

Query: 241 RFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESA 300
           R KS VPVYNALI+G C+E ++E   +L  EM V G+DP+VI+YS +IN+L E GNVE A
Sbjct: 241 RIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMA 300

Query: 301 FALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHG 360
            A+LA+MF RGCS N+ TFT L++G FM G   EAL+LW  MI++G EPN VAYNTLIHG
Sbjct: 301 LAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG 360

Query: 361 LCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPN 420
           LC+ G +VEA+ V  +MER+G  PN TTYSTLIDGFAKAGDLVGASE WN+MI++GC PN
Sbjct: 361 LCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 420

Query: 421 VVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLD 480
           VV YTCMVD LC+NSMF+ A  ++E M    C PNT+TFNTFIKGLC +G+ EWAMKVL+
Sbjct: 421 VVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 480

Query: 481 RMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAG 540
           +M+ + C PN+TTYNE+LD LF   +  EA  +  EIE+  ++ NLVTYNTIL GF  AG
Sbjct: 481 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 540

Query: 541 MLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITY 600
           M   ALQ+  K+LVGGT PD+ITYNT+I+AYCKQG+VKTA+QLV+R+    E  PD+ TY
Sbjct: 541 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTY 600

Query: 601 TSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDIL 658
           TSL+WG CNWI ++EA+ +L K +N+GICPN ATWN LVR  F  LGH+GPIHI+D+IL
Sbjct: 601 TSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNIL 656

BLAST of Cp4.1LG17g00090 vs. TrEMBL
Match: F6H707_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00600 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 6.4e-247
Identity = 415/656 (63.26%), Postives = 521/656 (79.42%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPN--KQHLLHESDVLKQLKKERNLSSAL 60
           M+LKEGCSLLLK++KP +PFVL+++P+ N +  N  K  +L E+DVLK+LK E +++ AL
Sbjct: 1   MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60

Query: 61  QYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINS 120
           +YF ++ANS +FKHT  TY++MIEKL  E +MD VQY+LQQMK++G++C EDLF+S+I S
Sbjct: 61  EYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGS 120

Query: 121 HKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPN 180
           ++RAGS+EQALK  YR+ +F  KPTVKIYNH+LDALL ENRFQMINP+Y NMKKDG+ PN
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180

Query: 181 VFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAG 240
           VFTYNILLKALCKN+RVD AHKL VEMSSKGC PD VSYTT++SSLCK GK+ +ARELA 
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM 240

Query: 241 RFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESA 300
            F  SVPVYNALI+G+CKE   E A +LL EMM  G+DPNVISY+ IIN+L ++GNVE +
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELS 300

Query: 301 FALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHG 360
            A+LA+MF+RGCS N+ TFT LI+G F++GG +EAL+ W  MI++G  PNVVAYN L+HG
Sbjct: 301 LAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHG 360

Query: 361 LCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPN 420
           LC+  SL +A+ V +QME +GC PNV TYS LIDG+AKAGDL GASE WN MI+HGC PN
Sbjct: 361 LCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN 420

Query: 421 VVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLD 480
           VVAYTCMVD LC+NSMF+QA  ++E M +E C PNTVTFNTFIKGLC +GRV+WA+KV D
Sbjct: 421 VVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFD 480

Query: 481 RMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAG 540
           +M    C PN TTYNELLD+L +  ++ EAFGL +++E   ++ NLVTYNTI+YG+  AG
Sbjct: 481 QMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAG 540

Query: 541 MLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITY 600
           MLGEAL+L  K++V GT PDAIT N +I AYCKQGKV  A+QL++R+   K W PDII Y
Sbjct: 541 MLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK-WHPDIIAY 600

Query: 601 TSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILD 655
           TSLI G C  I +EEAI YL + +++GI PN ATWNVLVR  F ++GH G +  LD
Sbjct: 601 TSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655

BLAST of Cp4.1LG17g00090 vs. TAIR10
Match: AT3G48810.1 (AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 717.6 bits (1851), Expect = 7.5e-207
Identity = 355/663 (53.54%), Postives = 476/663 (71.79%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN---PREPNKQHLLHESDVLKQLKKERNLSSA 60
           MYLKEGCSLLLK+QKPL+PFVLN++  +N      PN   +  E DV+K+L++E  +  A
Sbjct: 1   MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEI-KELDVVKRLRQESCVPLA 60

Query: 61  LQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIIN 120
           L +F ++ANSN FKHT  T+++MI KL  + Q+D VQY+LQQMK+ G +C EDLF+S+I+
Sbjct: 61  LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 120

Query: 121 SHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIP 180
            +++ G AE+A++M YRI EFGC P+VKIYNH+LD LL ENR QMI  VY +MK+DG  P
Sbjct: 121 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 180

Query: 181 NVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELA 240
           NVFTYN+LLKALCKN++VD A KL VEMS+KGC PDAVSYTT++SS+C+ G + + RELA
Sbjct: 181 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA 240

Query: 241 GRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVES 300
            RF+  V VYNALI+G+CKE   + A +L+ EM+  G+ PNVISYS +IN LC SG +E 
Sbjct: 241 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 300

Query: 301 AFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKD-GYEPNVVAYNTLI 360
           AF+ L QM  RGC  NI T + L++GCF+RG  ++AL+LW  MI+  G +PNVVAYNTL+
Sbjct: 301 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 360

Query: 361 HGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCC 420
            G C+ G++V+A+ V   ME  GC PN+ TY +LI+GFAK G L GA   WN+M++ GCC
Sbjct: 361 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 420

Query: 421 PNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNVV YT MV+ALC++S F +A S++E M+ E C P+  TFN FIKGLC  GR++WA KV
Sbjct: 421 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 480

Query: 481 LDRM-QGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFS 540
             +M Q HRC PNI TYNELLD L + N+  EA+GL +EI    ++ +  TYNT+L+G  
Sbjct: 481 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 540

Query: 541 RAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRT-MKEWRPD 600
            AG+ G ALQL  K++V G +PD IT N +I AYCKQGK + A Q+++ V    ++WRPD
Sbjct: 541 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 600

Query: 601 IITYTSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILD 658
           +I+YT++IWG C     E+ +  L + ++ GI P+ ATW+VL+ CF           ILD
Sbjct: 601 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF-----------ILD 651

BLAST of Cp4.1LG17g00090 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 346.7 bits (888), Expect = 3.5e-95
Identity = 200/631 (31.70%), Postives = 332/631 (52.61%), Query Frame = 1

Query: 14  QKPLMPFVLNSSPIINPREPNKQHLLHESDVLKQLKKERNLSSALQYFCAVANSNAFKHT 73
           +K L PF L+S         N  H +    + K L+   N+S++++ F    + N ++H+
Sbjct: 58  EKLLKPFDLDSLR-------NSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHS 117

Query: 74  ASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKMLY 133
              Y+++I KLG   +   +  +L QMK +G+   E LF+SI+  + +AG   Q  +++ 
Sbjct: 118 FDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 177

Query: 134 RIGE-FGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPNVFTYNILLKALCKN 193
            +   + C+PT K YN +L+ L++ N  ++   V+ +M    + P +FT+ +++KA C  
Sbjct: 178 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 237

Query: 194 DRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGR--FKSSVP---VY 253
           + +D+A  L  +M+  GC P++V Y T++ SL K  ++++A +L         VP    +
Sbjct: 238 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 297

Query: 254 NALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESAFALLAQMFS 313
           N +I G+CK  R+  A K++  M++ G  P+ I+Y  ++N LC+ G V++A      +F 
Sbjct: 298 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFY 357

Query: 314 RGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKD-GYEPNVVAYNTLIHGLCNSGSLV 373
           R     I  F  LI G    G   +A  +   M+   G  P+V  YN+LI+G    G + 
Sbjct: 358 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 417

Query: 374 EALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMV 433
            AL+V   M   GC PNV +Y+ L+DGF K G +  A    N M + G  PN V + C++
Sbjct: 418 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 477

Query: 434 DALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHRCL 493
            A CK     +A  I  +M  +GC P+  TFN+ I GLC    ++ A+ +L  M     +
Sbjct: 478 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 537

Query: 494 PNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQL 553
            N  TYN L++A  R  +  EA  L  E+       + +TYN+++ G  RAG + +A  L
Sbjct: 538 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 597

Query: 554 FCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITYTSLIWGAC 613
           F K+L  G  P  I+ N +I+  C+ G V+ AV+  ++   ++   PDI+T+ SLI G C
Sbjct: 598 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF-QKEMVLRGSTPDIVTFNSLINGLC 657

Query: 614 NWINIEEAITYLHKAMNQGICPNFATWNVLV 638
               IE+ +T   K   +GI P+  T+N L+
Sbjct: 658 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676

BLAST of Cp4.1LG17g00090 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-81
Identity = 169/604 (27.98%), Postives = 308/604 (50.99%), Query Frame = 1

Query: 48  LKKERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMD-GVN 107
           +K +++   AL+ F ++     FKHT STY+ +IEKLG   + + ++ +L  M+ + G +
Sbjct: 14  IKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNH 73

Query: 108 CCEDLFVSIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPV 167
             E ++V  + ++ R G  ++A+ +  R+  + C+PTV  YN ++  L+    F   + V
Sbjct: 74  MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV 133

Query: 168 YINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCK 227
           Y+ M+  G+ P+V+++ I +K+ CK  R  AA +L   MSS+GC  + V+Y T+V    +
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193

Query: 228 AGKIDDARELAGRFKSS-----VPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVIS 287
                +  EL G+  +S     +  +N L+  +CK+G V+   KLL +++  GV PN+ +
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253

Query: 288 YSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMI 347
           Y+  I  LC+ G ++ A  ++  +  +G   ++ T+  LI G      F EA      M+
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313

Query: 348 KDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLV 407
            +G EP+   YNTLI G C  G +  A ++      +G +P+  TY +LIDG    G+  
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373

Query: 408 GASETWNRMISHGCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFI 467
            A   +N  +  G  PNV+ Y  ++  L    M  +A  +  +M+ +G  P   TFN  +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433

Query: 468 KGLCRNGRVEWAMKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQ 527
            GLC+ G V  A  ++  M      P+I T+N L+       K   A  +   +    + 
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493

Query: 528 PNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQL 587
           P++ TYN++L G  +     + ++ +  ++  G  P+  T+N ++ + C+  K+  A+ L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553

Query: 588 VERVRTMKEWRPDIITYTSLIWGACNWINIEEAITYLHKAMN-QGICPNFATWNVLVRCF 645
           +E ++  K   PD +T+ +LI G C   +++ A T   K      +  +  T+N+++  F
Sbjct: 554 LEEMKN-KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 613

BLAST of Cp4.1LG17g00090 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 301.2 bits (770), Expect = 1.7e-81
Identity = 176/593 (29.68%), Postives = 302/593 (50.93%), Query Frame = 1

Query: 44  VLKQLKKERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMD 103
           +L  L+ + + S+AL+ F   +    F    + Y+ ++ +LGR    D ++ IL+ MK  
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 104 GVNCCEDLFVSIINSHKRAGSAEQALKML-YRIGEFGCKPTVKIYNHLLDALLTENRFQM 163
                   F+ +I S+ +    ++ L ++ + I EFG KP    YN +L+ L+  N  ++
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172

Query: 164 INPVYINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVS 223
           +   +  M   G+ P+V T+N+L+KALC+  ++  A  +  +M S G  PD  ++TT++ 
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232

Query: 224 SLCKAGKIDDARELA------GRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMM-VNGV 283
              + G +D A  +       G   S+V V N ++ G CKEGRVE A+  + EM   +G 
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGF 292

Query: 284 DPNVISYSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALE 343
            P+  +++ ++N LC++G+V+ A  ++  M   G   ++ T+  +I G    G   EA+E
Sbjct: 293 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 352

Query: 344 LWKLMIKDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFA 403
           +   MI     PN V YNTLI  LC    + EA ++   +   G LP+V T+++LI G  
Sbjct: 353 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 412

Query: 404 KAGDLVGASETWNRMISHGCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTV 463
              +   A E +  M S GC P+   Y  ++D+LC     D+A +++++M L GC  + +
Sbjct: 413 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 472

Query: 464 TFNTFIKGLCRNGRVEWAMKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEI 523
           T+NT I G C+  +   A ++ D M+ H    N  TYN L+D L ++ +  +A  L  ++
Sbjct: 473 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 532

Query: 524 EKGNLQPNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKV 583
                +P+  TYN++L  F R G + +A  +   +   G  PD +TY T+I   CK G+V
Sbjct: 533 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 592

Query: 584 KTAVQLVERVRTMKEWRPDIITYTSLIWGACNWINIEEAITYLHKAMNQGICP 629
           + A +L+  ++ MK        Y  +I G        EAI    + + Q   P
Sbjct: 593 EVASKLLRSIQ-MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

BLAST of Cp4.1LG17g00090 vs. TAIR10
Match: AT1G63080.1 (AT1G63080.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-80
Identity = 175/550 (31.82%), Postives = 286/550 (52.00%), Query Frame = 1

Query: 54  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFV 113
           L  A+  F  +  S  F       KL+   + +  + D+V    ++M++ GV+     + 
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLL-SAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 105

Query: 114 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKD 173
            +IN   R      AL +L ++ + G  P++   N LL+     NR      +   M + 
Sbjct: 106 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 165

Query: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 233
           G  P+  T+  L+  L ++++   A  L   M  KGC PD V+Y  +++ LCK G+ D A
Sbjct: 166 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 225

Query: 234 RELA-----GRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINS 293
             L      G+ ++ V +Y+ +ID +CK   V+ A+ L  EM   G+ P+V +YS +I+ 
Sbjct: 226 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 285

Query: 294 LCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPN 353
           LC  G    A  LL+ M  R  + N+ TF  LI      G   EA +L+  MI+   +PN
Sbjct: 286 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 345

Query: 354 VVAYNTLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWN 413
           +V YN+LI+G C    L EA Q+   M    CLP+V TY+TLI+GF KA  +V   E + 
Sbjct: 346 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 405

Query: 414 RMISHGCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNG 473
            M   G   N V YT ++    + S  D A  + ++M  +G  PN +T+NT + GLC+NG
Sbjct: 406 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 465

Query: 474 RVEWAMKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYN 533
           ++E AM V + +Q  +  P+I TYN + + + +  K  + + LF  +    ++P+++ YN
Sbjct: 466 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 525

Query: 534 TILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTM 593
           T++ GF + G+  EA  LF K+   G  PD+ TYNT+I A+ + G    + +L++ +R+ 
Sbjct: 526 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 585

Query: 594 KEWRPDIITY 599
           + +  D  TY
Sbjct: 586 R-FAGDASTY 593

BLAST of Cp4.1LG17g00090 vs. NCBI nr
Match: gi|449462136|ref|XP_004148797.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis sativus])

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 568/659 (86.19%), Postives = 613/659 (93.02%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLHESDVLKQLKKERNLSSALQY 60
           MYLKEG SLL+KIQKPL+PFVLNS+PIINPR+PNKQ LL ESDVLK+LK +RNLSS L +
Sbjct: 1   MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGF 60

Query: 61  FCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINSHK 120
           F A+ANSNAF+HTASTY++MIE+LGREC+MD+VQYILQQMKMDG+NCCEDLF+ IIN +K
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 121 RAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPNVF 180
           R GSAEQALKM YRIGEFGCKPTV+IYNHLLDALL+EN+FQMINP+Y NMKKDGLIPNVF
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 181 TYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF 240
           TYNILLKALCKNDRVDAAHKLFVEMS+KGCPPDAV+YTTMVSSLCKAGKIDDARELAGRF
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 241 KSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESAFA 300
           K SVPVYNALIDGMCKEGR+EVAIKLLGEMM NGVDPNV+SYSCIINSLC SGNVE AFA
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 301 LLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHGLC 360
           L AQMF RGC ANI TFTPLI+GCFMRG  YEAL+LWKLMI+DG EPNVVAYNTLIHGLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 361 NSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVV 420
           ++GSL EALQVCDQM+RSGCLPNVTTYS LIDGFAK+GDLVGASETWNRMISHGC PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 421 AYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRM 480
            YTCMVD LCKNSMFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RM
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 481 QGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGML 540
           QGH CLPNITTYNELLDALFR NKY EAFGLFQEIE  NLQPNLVTYNT+LYGFSRAGM+
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 541 GEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITYTS 600
           GEALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEW PDIITYTS
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 601 LIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDILGK 660
           LIWGACNW+NIEEA+ +L KA+NQGICPNFATWN LVRCFFDSLGHMGPIHILDDIL K
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659

BLAST of Cp4.1LG17g00090 vs. NCBI nr
Match: gi|659116911|ref|XP_008458325.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis melo])

HSP 1 Score: 1187.6 bits (3071), Expect = 0.0e+00
Identity = 569/659 (86.34%), Postives = 613/659 (93.02%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLHESDVLKQLKKERNLSSALQY 60
           MYLKEGCSLL+KIQKPL+PFVLNS+PIINPR+PNKQ LL ESDVLK+LK +RNLSSAL +
Sbjct: 1   MYLKEGCSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSALGF 60

Query: 61  FCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSIINSHK 120
           F A+ANSNAF+HTASTY++MIEKLGREC+MDVVQYILQQMKMDG+NCCEDLF+ IIN +K
Sbjct: 61  FTAIANSNAFQHTASTYRVMIEKLGRECEMDVVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 121 RAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLIPNVF 180
           R GSAEQALK+ YRIGEFGCKPTVKIYNHLLDALL+EN+FQMINP+Y NMKK GLIPNVF
Sbjct: 121 RVGSAEQALKLFYRIGEFGCKPTVKIYNHLLDALLSENKFQMINPLYNNMKKGGLIPNVF 180

Query: 181 TYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF 240
           TYNILLKALCKN RVDAAHKLFVEMS+KGCPPDAV+YTTMVSSLCKAGKIDDARELAGRF
Sbjct: 181 TYNILLKALCKNGRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 241 KSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVESAFA 300
           K +VPVYNALIDGMCKEGR+EVAIKLLGEMM NGVDPNV+SYS IINSLC  GNVE AFA
Sbjct: 241 KPNVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSSIINSLCVFGNVELAFA 300

Query: 301 LLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHGLC 360
           LLAQMFSRGC ANI TFTPLI+GCFMRG  YEAL+LWKLMI+DG EPNVVAYNTLIHGLC
Sbjct: 301 LLAQMFSRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIRDGCEPNVVAYNTLIHGLC 360

Query: 361 NSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVV 420
           +SGSL EALQV DQM+RSGC+PNVTTYS LIDGFAK+GDLVGASETWNRMISHGC PNVV
Sbjct: 361 SSGSLEEALQVRDQMQRSGCVPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 421 AYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRM 480
           AYTCMVD LCKNSMFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RM
Sbjct: 421 AYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 481 QGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGML 540
           QGH CLPNITTYNELLDALFR NKY EAFGLFQEIE+ NLQPNLVTYNTILYGFSRAGM+
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEERNLQPNLVTYNTILYGFSRAGMI 540

Query: 541 GEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDIITYTS 600
           GEALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEW+PDIITYT 
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWQPDIITYTG 600

Query: 601 LIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDILGK 660
           LIWGAC WINIEEAI +L KA+NQGICPNFATWN L+RCFFDSLGHMGPIHILDDIL K
Sbjct: 601 LIWGACKWINIEEAIAFLDKAINQGICPNFATWNALIRCFFDSLGHMGPIHILDDILRK 659

BLAST of Cp4.1LG17g00090 vs. NCBI nr
Match: gi|694393292|ref|XP_009372091.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Pyrus x bretschneideri])

HSP 1 Score: 924.1 bits (2387), Expect = 1.5e-265
Identity = 432/667 (64.77%), Postives = 549/667 (82.31%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSS-PII--NPR---EPNK-QHLLHESDVLKQLKKERN 60
           MYLKEG SLLLK+ KP +PFVLN++ PI+  NP+   EPN+ Q  L ESDVL++LK E +
Sbjct: 1   MYLKEGRSLLLKVHKPSVPFVLNTTNPILSSNPKPQIEPNQDQPFLKESDVLQRLKSEHH 60

Query: 61  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFV 120
           L SAL+YF ++ANS AF+HT  TY  MIEKLGR+C+MD VQY+L QMK++GV C E+LF+
Sbjct: 61  LGSALEYFRSIANSRAFEHTPLTYHAMIEKLGRQCEMDGVQYLLNQMKLEGVGCSEELFI 120

Query: 121 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKD 180
           S+I+S++RAG AEQALKM YRI E GCK TVKIYNHLLDALL+ENRFQMINP+Y NMKKD
Sbjct: 121 SVISSYRRAGLAEQALKMFYRIRELGCKSTVKIYNHLLDALLSENRFQMINPIYSNMKKD 180

Query: 181 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 240
           G+ PNV+TYNILLKALCKNDRVD AHKL VEMS KGCPPDAVSYTT+VS+LC+ GK+++A
Sbjct: 181 GMEPNVYTYNILLKALCKNDRVDGAHKLLVEMSKKGCPPDAVSYTTVVSALCRLGKVEEA 240

Query: 241 RELAGRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESG 300
           RELAGRF+  VP YNAL++G+CKE ++E A+KLL EM+  G++PNVI+YS IINSL ++ 
Sbjct: 241 RELAGRFEPIVPAYNALVNGVCKENKIEEALKLLVEMVDKGINPNVITYSTIINSLSDTR 300

Query: 301 NVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYN 360
           NVESA A+LAQMF RGCS N+ TFT LI+G F+ G  +EAL+LWK MI +G++PN++AY 
Sbjct: 301 NVESALAVLAQMFVRGCSPNVHTFTSLIKGYFVEGRVHEALDLWKQMILEGFKPNIIAYT 360

Query: 361 TLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISH 420
           TL+HGLC +G + +A+ VC +M+++GC PNVTTYSTLIDGFAK GDLVGASETWN M++ 
Sbjct: 361 TLVHGLCTNGKMGDAVSVCHEMDKNGCPPNVTTYSTLIDGFAKVGDLVGASETWNNMMNR 420

Query: 421 GCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWA 480
           G  PNV+AYTCMVD LC+N MF QA+S++E M  EGC PNTVTFNTFIKGLC +G+V+WA
Sbjct: 421 GYRPNVIAYTCMVDVLCRNFMFHQAHSLVENMAAEGCPPNTVTFNTFIKGLCADGKVDWA 480

Query: 481 MKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYG 540
           + +LD+M+ + C PNITTYNELLD LF+ N++ EA+G+ +E+E+  +  NLVTYNTIL G
Sbjct: 481 VNMLDKMEKNGCFPNITTYNELLDGLFKANRFEEAYGIVREMEERGMIMNLVTYNTILNG 540

Query: 541 FSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRP 600
           F  AGM  EA+QL  K+LV GT PDAITYNT+I+A CK+G + TA+QL +R+   KEW+P
Sbjct: 541 FCHAGMTKEAMQLLGKMLVRGTKPDAITYNTIIYANCKEGTISTAIQLFDRIGAEKEWQP 600

Query: 601 DIITYTSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHIL 660
           D++ YTSL+WG CNW+ ++EA+ YL+K +++GICPN  TWN LVRCFF SLGH+GPI++L
Sbjct: 601 DVVAYTSLVWGICNWVGLDEAMIYLNKMVSEGICPNTGTWNALVRCFFSSLGHLGPIYML 660

BLAST of Cp4.1LG17g00090 vs. NCBI nr
Match: gi|645233585|ref|XP_008223416.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Prunus mume])

HSP 1 Score: 918.7 bits (2373), Expect = 6.3e-264
Identity = 430/661 (65.05%), Postives = 538/661 (81.39%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN----PREPNKQHLLHESDVLKQLKKERNLSS 60
           MYLKEGCSLLLK+ KP  PFVLN++PI+N    P+    Q  L E DVL++L+ E +++S
Sbjct: 1   MYLKEGCSLLLKVHKPSRPFVLNTNPILNSNPKPQMEPSQAFLEEYDVLQRLRHEHHIAS 60

Query: 61  ALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFVSII 120
           AL+YF +++NS AFKHT  TY+ MI KLG +C+MD VQY+L QMK++G+ C E+LF+S+I
Sbjct: 61  ALEYFRSISNSRAFKHTPLTYEAMIVKLGSQCEMDGVQYLLNQMKLEGLGCSEELFISVI 120

Query: 121 NSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKDGLI 180
           NS++RAG AEQALKM YRI EFGCKPTVKIYNHLLDALL+ENRFQMINP+Y NMKKDG+ 
Sbjct: 121 NSYRRAGLAEQALKMFYRIREFGCKPTVKIYNHLLDALLSENRFQMINPIYSNMKKDGME 180

Query: 181 PNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDAREL 240
           PNV+TYNILLKALCKNDRVD AHKL VEMS KGC PDAVSYTT+VS+LC+ GK+++AREL
Sbjct: 181 PNVYTYNILLKALCKNDRVDGAHKLLVEMSKKGCSPDAVSYTTVVSALCRVGKVEEAREL 240

Query: 241 AGRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESGNVE 300
           A RF   VPVYNA+I+G+CKE ++E A++LL EM+  G+DPNVI+YS IIN L +  NVE
Sbjct: 241 AVRFDPIVPVYNAVINGVCKECKIEEALELLVEMVDKGIDPNVITYSTIINYLSDMRNVE 300

Query: 301 SAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLI 360
           SA ALLAQMF RGCS NI TFT LI+G F+ G  +EAL LWK +I++G+ PN++AY +L+
Sbjct: 301 SALALLAQMFVRGCSPNIHTFTSLIKGYFLEGRVHEALGLWKRIIREGFVPNIIAYTSLM 360

Query: 361 HGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCC 420
           HGLC++G + +A+ V  +MER+GC PNVTTY TLIDGFAKAG+LVGASETWN M++HGC 
Sbjct: 361 HGLCSNGKMGDAVSVLHEMERNGCPPNVTTYGTLIDGFAKAGNLVGASETWNNMMNHGCR 420

Query: 421 PNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNV+AYTCMVD LC+N MF QA  ++E MT EGC PN VTFNTFIKGLC +G+V+WA+K+
Sbjct: 421 PNVIAYTCMVDVLCRNYMFHQAQCLVENMTAEGCPPNAVTFNTFIKGLCGDGKVDWAVKM 480

Query: 481 LDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSR 540
           LD+M+ H C PNITTYNELLD LF+ N++ EAFGL +EI++  ++ NLVTYNTIL GF +
Sbjct: 481 LDKMEKHGCFPNITTYNELLDGLFKVNRFEEAFGLVKEIQERGMELNLVTYNTILNGFCQ 540

Query: 541 AGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRPDII 600
           AGM  + +QLF K+LVGGT PDAITYN +I+AYCKQG++ TA Q+   +   KEW+PD+I
Sbjct: 541 AGMTMDGMQLFGKMLVGGTKPDAITYNIIIYAYCKQGRISTATQIFNSIGAAKEWQPDVI 600

Query: 601 TYTSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHILDDI 658
            YTSL+ G CN I ++EA+ YLHK + +GICPN  TWNVLVRCFF SLG + PI+ILDDI
Sbjct: 601 AYTSLLSGICNLIGLDEAMVYLHKMIREGICPNIGTWNVLVRCFFSSLGQLEPIYILDDI 660

BLAST of Cp4.1LG17g00090 vs. NCBI nr
Match: gi|657996104|ref|XP_008390413.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Malus domestica])

HSP 1 Score: 917.5 bits (2370), Expect = 1.4e-263
Identity = 428/667 (64.17%), Postives = 545/667 (81.71%), Query Frame = 1

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSS-PII--NPR---EPNK-QHLLHESDVLKQLKKERN 60
           MYLKEG SLLLK+ KP +PFVLN++ PI+  NP+   EPN+ Q  L ESDVL++LK E +
Sbjct: 1   MYLKEGRSLLLKVHKPSVPFVLNTTNPILGSNPKPQIEPNQDQPFLKESDVLQRLKSEHH 60

Query: 61  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECQMDVVQYILQQMKMDGVNCCEDLFV 120
           L SAL+YF ++ANS AF+HT  TY  MIEKLGR+C+MD VQY+L QMK++GV C E+LF+
Sbjct: 61  LGSALEYFRSIANSRAFEHTPLTYHAMIEKLGRQCEMDGVQYLLNQMKLEGVGCSEELFI 120

Query: 121 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPVYINMKKD 180
            +I+S++RAG AEQALKM YRI EFGCK TVKIYNHLLDALL+ENRFQMINP+Y NMKKD
Sbjct: 121 CVISSYRRAGLAEQALKMFYRIREFGCKSTVKIYNHLLDALLSENRFQMINPIYSNMKKD 180

Query: 181 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 240
           G+ PNV+TYNILLKALCKNDRVD AHKL VEMS KGC PDAVSYTT+VS+LC+ GK+++A
Sbjct: 181 GMEPNVYTYNILLKALCKNDRVDGAHKLLVEMSKKGCLPDAVSYTTVVSALCRLGKVEEA 240

Query: 241 RELAGRFKSSVPVYNALIDGMCKEGRVEVAIKLLGEMMVNGVDPNVISYSCIINSLCESG 300
           RELAGRF+  VPVYNAL++G+CKE ++E A+KLL EM+  G++PNVI+YS IINSL ++ 
Sbjct: 241 RELAGRFEPIVPVYNALVNGVCKENKIEAALKLLVEMVDKGINPNVITYSTIINSLSDTR 300

Query: 301 NVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYN 360
           NVESA A+LAQM  RGCS N+ TFT LI+G F+ G  +EAL+LW  MI + ++PN++AY 
Sbjct: 301 NVESALAVLAQMIVRGCSPNVHTFTSLIKGYFVEGRVHEALDLWNRMILEEFKPNIIAYT 360

Query: 361 TLIHGLCNSGSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISH 420
           TL+HGLC +G + +A+ VC +M+++GC PNVTTYSTLIDGFAK GDLVGAS+TWN M++ 
Sbjct: 361 TLVHGLCTNGKMGDAVSVCHEMDKNGCPPNVTTYSTLIDGFAKVGDLVGASDTWNNMMNR 420

Query: 421 GCCPNVVAYTCMVDALCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWA 480
           GC PNV+AYTCM D LC+N MF QA S++E M  EGC PNTVTFNTFIKGLC +G+V+WA
Sbjct: 421 GCRPNVIAYTCMXDVLCRNFMFHQAXSLVENMAAEGCXPNTVTFNTFIKGLCADGKVDWA 480

Query: 481 MKVLDRMQGHRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYG 540
           + +LD+M+ + CLPNITTYNELLD LF+ N++ EA+G+ +EIE+  +  NLVTYNTIL G
Sbjct: 481 VNMLDKMEKNGCLPNITTYNELLDGLFKXNRFEEAYGIVREIEERGMXMNLVTYNTILNG 540

Query: 541 FSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWRP 600
           F   GM  EA+QL  K+LV GT PDAITYNT+I+A CK+G + TA+QL +R+   K+WRP
Sbjct: 541 FCHXGMTKEAMQLLGKMLVRGTKPDAITYNTIIYANCKEGTISTAIQLFDRIGAEKZWRP 600

Query: 601 DIITYTSLIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFFDSLGHMGPIHIL 660
           D++ YTSL+WG CNW+ ++EA+ YL+K +++GICPN  TWN LVRCFF SLGH+GPI++L
Sbjct: 601 DVVAYTSLVWGICNWVGLDEAMIYLNKMVSEGICPNTGTWNXLVRCFFSSLGHLGPIYML 660

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP270_ARATH1.3e-20553.54Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN... [more]
PP444_ARATH6.2e-9431.70Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
PP120_ARATH2.3e-8027.98Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
PP281_ARATH3.0e-8029.68Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PPR98_ARATH2.5e-7931.82Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KCK1_CUCSA0.0e+0086.19Uncharacterized protein OS=Cucumis sativus GN=Csa_6G324890 PE=4 SV=1[more]
V4S1G4_9ROSI1.5e-25664.60Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004501mg PE=4 SV=1[more]
A0A067JVP2_JATCU2.5e-25162.93Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19037 PE=4 SV=1[more]
B9HX52_POPTR7.5e-24863.13Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
F6H707_VITVI6.4e-24763.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00600 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT3G48810.17.5e-20753.54 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G64320.13.5e-9531.70 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74580.11.3e-8127.98 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53700.11.7e-8129.68 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63080.11.4e-8031.82 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449462136|ref|XP_004148797.1|0.0e+0086.19PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis sativu... [more]
gi|659116911|ref|XP_008458325.1|0.0e+0086.34PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis melo][more]
gi|694393292|ref|XP_009372091.1|1.5e-26564.77PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Pyrus x bretsc... [more]
gi|645233585|ref|XP_008223416.1|6.3e-26465.05PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Prunus mume][more]
gi|657996104|ref|XP_008390413.1|1.4e-26364.17PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Malus domestic... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048445 carpel morphogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g00090.1Cp4.1LG17g00090.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 491..517
score: 0.0092coord: 316..344
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 448..481
score: 1.8E-15coord: 414..446
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 244..290
score: 3.1E-15coord: 347..396
score: 9.5E-19coord: 177..226
score: 9.7E-19coord: 522..571
score: 1.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 591..639
score: 0.0011coord: 96..153
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 491..523
score: 1.5E-4coord: 455..489
score: 4.1E-10coord: 280..313
score: 7.7E-8coord: 525..558
score: 3.4E-6coord: 350..384
score: 1.3E-10coord: 316..349
score: 1.5E-5coord: 420..454
score: 1.3E-7coord: 180..214
score: 1.8E-11coord: 215..236
score: 5.4E-5coord: 246..279
score: 7.3E-10coord: 596..629
score: 0.0011coord: 560..590
score: 3.9E-7coord: 386..419
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 383..417
score: 12.079coord: 523..557
score: 11.17coord: 108..142
score: 8.111coord: 453..487
score: 12.606coord: 313..347
score: 10.753coord: 143..177
score: 8.155coord: 243..277
score: 12.43coord: 213..242
score: 7.936coord: 418..452
score: 11.696coord: 73..107
score: 7.377coord: 558..588
score: 10.885coord: 348..382
score: 13.362coord: 594..628
score: 8.659coord: 488..522
score: 10.633coord: 278..312
score: 11.323coord: 178..212
score: 13
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 327..435
score: 1.9E-9coord: 491..632
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 114..670
score: 1.8E
NoneNo IPR availablePANTHERPTHR24015:SF269SUBFAMILY NOT NAMEDcoord: 114..670
score: 1.8E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 487..625
score: 9.4

The following gene(s) are paralogous to this gene:

None