CmaCh08G012930 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G012930
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCma_Chr08 : 7847717 .. 7851119 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTGAAAGAAGGTTGCTCTTTATTGCTGAAGATTCAGAAACCCCTGATGCCCTTCGTACTAAATTCAAGCCCCATCATCAATCCCCGTGAGCCCAATAAACAACACCTTCTGCAAGAATCCGATGTGCTCAAACAATTGAAAAGGGAACGCAATCTTTCATCGGCATTACAATACTTCTGCGCTGTAGCCAACTCAAACGCTTTCAAACACACCGCATCCACGTATAAGCTCATGATTGAGAAGCTCGGCCGTGAATGTGAAATGGATGTGGTGCAATACATTTTACAGCAAATGAAGATGGATGGCGTAAATTGCTGCGAAGATTTGTTTGTAAGTATAATAAATAGTCACAAACGCGCAGGCTCCGCCGAGCAAGCGCTAAAGATGCTCTATCGGATTGGAGAGTTCGGGTGCAAGCCGACGGTGAAGATTTACAATCATCTTTTGGATGCGTTGCTGACTGAAAACAGGTTTCAGATGATCAATCCCTTGTATATTAATATGAAGAAAGACGGATTAATTCCTAATGTCTTTACATATAATATACTCTTGAAGGCGCTTTGTAAGAATGATCGGGTTGATGCTGCACACAAGCTGTTTGTTGAAATGTCTAGTAAGGGCTGCCCACCCGACGCGGTTAGCTATACGACTATGGTGTCTTCACTTTGTAAAGCGGGTAAGATCGACGATGCTAGAGAGCTAGCGGGAAGATTTAAACCAAGTGTTCCTGTTTATAATGCTTTGATTCATGGGACGTGCAAAGAAGGAAGAGTTGAGGTAGCGATCAAGTTGTTAGGTGAAATGATGGAAAATGGAGTTGACCCTAATGTGATCTCATATTCGTGTATTATAAATTCTCTTTGCGAGTCGGGAAATGTTGAGTCGGCTTTTGCATTATTGGCTCAAATGTTTTCTAGAGGTTGTAGTGCCAATATCCAAACCTTTACGCCATTGATCAGGGGTTGTTTCATGAGAGGGAGATTCTATGAAGCTCTTGAATTGTGGAAGCTTATGATAAAGGATGGTTATGAGCCAAATGTAGTCGCTTACAACACTCTTATTCATGGTCTTTGCAATAGTGGGAGTTTGGTAGAAGCCTTACAAGTATGTGATCAATTGGAGAGGAGTGGTTGTCTCTCTAATGTGATTACTTACAGCATTCTAATTGATGGTTTTGCAAAAGCTGGTGATTTGGTTGGTGCATCTGAGACATGGAATAGGATGATATCCCATGGTTGTTGTCCTAATGTGGTGGCCTATACCTGCATGGTGGATGTCCTTTGTAAAAATTGGATGTTTGACCAAGCCAATTCTATTATGGAGAAGATGACTCTTGAGGGCTGTACTCCAAATACTGTAACATTTAACACGTTCATCAAAGGTTTGTGTAGAAATGGAAGAGTAGAATGGGCAATGAAAGTGCTTGATCGAATGCAAGGACATGGGTGTCTCCCTAATATCACAACTTACAATGAGTTACTTGATGCTCTATTCAGGACGAACAAGTACGCAGAGGCTTTCGGGCTTTTCCAGGAGATTGAAAAGGGAAATTTACAGCCAAACTTAGTGACTTATAATACCATTTTATATGGTTTTTCTCGAGCTGGCATGCTTGGAGAGGCGCTGCAACTTTTTTGTAAAGTACTTGTGGGTGGCACTACCCCGGATGCCATCACATATAATACAATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGACTGCAGTTCAGCTGGTGGAACGAGTTAGAACTATGAAGGAGTGGCATCCAGATATCATCACATACACTATCCTCATATGGGGTGCCTGCAATTGGATAAATATAGAAGAAGCCATTACTTATCTTCACAAGGCAATGAATCAAGGAATCTGCCCCAACTTTGCCACATGGAATGTATTGGTTTGGTGTTTCTTTGACTCTTTAGGTCATATGGGTCCAATTCACATTTTGGACGATATTCTGGGAAAGCGGTAAGATGGTGAGTTTGAAAGACGTTCATAAAACCAATTTCAGATGTAGTTGTGACCTCAGATTACGTACATACTGAGATTTTTGCTTGAACACACTTGTAGAGTTCTTAAGGATGCTTGGGCAGGTTATGCTCTTCTTGGCTTACTCTTTAAATTGACTAGCGGGGAATCAAATTCTATGGCATATGCCCAATTGGAGCAACATGCCAATGTTGAGTTTTTCTGGCACCTTTTTGTTATCATGGATGGTATCTTCTCGCCCGTGTGATGTTTATTGCAAAATGAATCAACAAGGTAATGTCAATTCTTCAGGCATCTTGATGGGTCACCATGCGTATATGTTTTCCCATACATGATTTGCAATATATTGTGCAGGGAATCCACCTTTTGTTCATTGTATGGTTAAATGGTTTCCACTACATTCATTTTAACGTGATTTGTAGTAATTATGGAAGAATCTCAACAGTCCGCTGAGACGTAAATCTTGATTATTATTGGAAAATTCCCTAGGAACACGATCATTACCCCCACCATACACAATCTTGAGAATCTTCTCGGTTTGTTCTTACGTATGAGAGTGAGTACTGTGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATAGCTTTGCGTTGGGCTTTCCCAAAAGGCTTCATACTAATGGAGATGTATTCCTTATTCATAAACCCATGATCATCCCCTAAATTAGCCAGTGTGAGACTCTCTCCCAACAATCCTCAACATAATGATCTCCCACAATCATGTTGCCTGAAATCTTATCCTCAGCACCCGCATAGTTGGGTACCACAATGCCTTCATCTTTCAGGCCAGCACGTTCAAGCTTATTTTGCAGATTTGAGATGTGCTGCGTGAACTCTGCCATAGTTACTCCATATAGTTCAACATTTTTCGCTGCATATTGACCTGTTTATACTTTCAGAAGACCTGCTACAATTTGAAATATTGGCTCGTGGGATTGTGGTTAGTGTCATGCATGTGTGTATGATTTGATCTCATGCTTAAAATTATCTTTGAATTTCAGGGAATACCTTCTTGGAGACAGCAGATTCGAGTTTTGGATTTCCTCCCGCATAAGGAACCAGGCTATGGTGGTAATTCAAGCCATCAGCACAAGGGTCAAAAGGTGGTCTCAACCGGCGGCCAAATGCTCTATCCATCACTTTGGAATATGATGTTGAACAAGCCCAGTAATGGCCTTGGAAATCCTTTTACTGTATCTTTAATTATCCTGCGTGAATTGTATAATGTGAAATTCCCTGCAGAGATTCATGAAGGAGAAGTCGGTACGCGTTTTAGCGTATCTTTGATTGTATCTTTAATTATCTTGAGGGAAAGTTTGGAAAGGAAAGTCCAAAGAGGACAAACATTCTTTATCAG

mRNA sequence

ATGTATTTGAAAGAAGGTTGCTCTTTATTGCTGAAGATTCAGAAACCCCTGATGCCCTTCGTACTAAATTCAAGCCCCATCATCAATCCCCGTGAGCCCAATAAACAACACCTTCTGCAAGAATCCGATGTGCTCAAACAATTGAAAAGGGAACGCAATCTTTCATCGGCATTACAATACTTCTGCGCTGTAGCCAACTCAAACGCTTTCAAACACACCGCATCCACGTATAAGCTCATGATTGAGAAGCTCGGCCGTGAATGTGAAATGGATGTGGTGCAATACATTTTACAGCAAATGAAGATGGATGGCGTAAATTGCTGCGAAGATTTGTTTGTAAGTATAATAAATAGTCACAAACGCGCAGGCTCCGCCGAGCAAGCGCTAAAGATGCTCTATCGGATTGGAGAGTTCGGGTGCAAGCCGACGGTGAAGATTTACAATCATCTTTTGGATGCGTTGCTGACTGAAAACAGGTTTCAGATGATCAATCCCTTGTATATTAATATGAAGAAAGACGGATTAATTCCTAATGTCTTTACATATAATATACTCTTGAAGGCGCTTTGTAAGAATGATCGGGTTGATGCTGCACACAAGCTGTTTGTTGAAATGTCTAGTAAGGGCTGCCCACCCGACGCGGTTAGCTATACGACTATGGTGTCTTCACTTTGTAAAGCGGGTAAGATCGACGATGCTAGAGAGCTAGCGGGAAGATTTAAACCAAGTGTTCCTGTTTATAATGCTTTGATTCATGGGACGTGCAAAGAAGGAAGAGTTGAGGTAGCGATCAAGTTGTTAGGTGAAATGATGGAAAATGGAGTTGACCCTAATGTGATCTCATATTCGTGTATTATAAATTCTCTTTGCGAGTCGGGAAATGTTGAGTCGGCTTTTGCATTATTGGCTCAAATGTTTTCTAGAGGTTGTAGTGCCAATATCCAAACCTTTACGCCATTGATCAGGGGTTGTTTCATGAGAGGGAGATTCTATGAAGCTCTTGAATTGTGGAAGCTTATGATAAAGGATGGTTATGAGCCAAATGTAGTCGCTTACAACACTCTTATTCATGGTCTTTGCAATAGTGGGAGTTTGGTAGAAGCCTTACAAGTATGTGATCAATTGGAGAGGAGTGGTTGTCTCTCTAATGTGATTACTTACAGCATTCTAATTGATGGTTTTGCAAAAGCTGGTGATTTGGTTGGTGCATCTGAGACATGGAATAGGATGATATCCCATGGTTGTTGTCCTAATGTGGTGGCCTATACCTGCATGGTGGATGTCCTTTGTAAAAATTGGATGTTTGACCAAGCCAATTCTATTATGGAGAAGATGACTCTTGAGGGCTGTACTCCAAATACTGTAACATTTAACACGTTCATCAAAGGTTTGTGTAGAAATGGAAGAGTAGAATGGGCAATGAAAGTGCTTGATCGAATGCAAGGACATGGGTGTCTCCCTAATATCACAACTTACAATGAGTTACTTGATGCTCTATTCAGGACGAACAAGTACGCAGAGGCTTTCGGGCTTTTCCAGGAGATTGAAAAGGGAAATTTACAGCCAAACTTAGTGACTTATAATACCATTTTATATGGTTTTTCTCGAGCTGGCATGCTTGGAGAGGCGCTGCAACTTTTTTGTAAAGTACTTGTGGGTGGCACTACCCCGGATGCCATCACATATAATACAATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGACTGCAGTTCAGCTGGTGGAACGAGTTAGAACTATGAAGGAGTGGCATCCAGATATCATCACATACACTATCCTCATATGGGGTGCCTGCAATTGGATAAATATAGAAGAAGCCATTACTTATCTTCACAAGGCAATGAATCAAGGAATCTGCCCCAACTTTGCCACATGGAATGTATTGGTTTGGTGTTTCTTTGACTCTTTAGGTCATATGGGTCCAATTCACATTTTGGACGATATTCTGGGAAAGCGAGTTCTTAAGGATGCTTGGGCAGGTTATGCTCTTCTTGGCTTACTCTTTAAATTGACTAGCGGGGAATCAAATTCTATGGCATATGCCCAATTGGAGCAACATGCCAATGTTGAGTTTTTCTGGCACCTTTTTGTTATCATGGATGGTATCTTCTCGCCCGTGGAATACCTTCTTGGAGACAGCAGATTCGAGTTTTGGATTTCCTCCCGCATAAGGAACCAGGCTATGGTGGTAATTCAAGCCATCAGCACAAGGGTCAAAAGGTGGTCTCAACCGGCGGCCAAATGCTCTATCCATCACTTTGGAATATGATGTTGAACAAGCCCAGTAATGGCCTTGGAAATCCTTTTACTGTATCTTTAATTATCCTGCGTGAATTGTATAATGTGAAATTCCCTGCAGAGATTCATGAAGGAGAAGTCGGTACGCGTTTTAGCGTATCTTTGATTGTATCTTTAATTATCTTGAGGGAAAGTTTGGAAAGGAAAGTCCAAAGAGGACAAACATTCTTTATCAG

Coding sequence (CDS)

ATGTATTTGAAAGAAGGTTGCTCTTTATTGCTGAAGATTCAGAAACCCCTGATGCCCTTCGTACTAAATTCAAGCCCCATCATCAATCCCCGTGAGCCCAATAAACAACACCTTCTGCAAGAATCCGATGTGCTCAAACAATTGAAAAGGGAACGCAATCTTTCATCGGCATTACAATACTTCTGCGCTGTAGCCAACTCAAACGCTTTCAAACACACCGCATCCACGTATAAGCTCATGATTGAGAAGCTCGGCCGTGAATGTGAAATGGATGTGGTGCAATACATTTTACAGCAAATGAAGATGGATGGCGTAAATTGCTGCGAAGATTTGTTTGTAAGTATAATAAATAGTCACAAACGCGCAGGCTCCGCCGAGCAAGCGCTAAAGATGCTCTATCGGATTGGAGAGTTCGGGTGCAAGCCGACGGTGAAGATTTACAATCATCTTTTGGATGCGTTGCTGACTGAAAACAGGTTTCAGATGATCAATCCCTTGTATATTAATATGAAGAAAGACGGATTAATTCCTAATGTCTTTACATATAATATACTCTTGAAGGCGCTTTGTAAGAATGATCGGGTTGATGCTGCACACAAGCTGTTTGTTGAAATGTCTAGTAAGGGCTGCCCACCCGACGCGGTTAGCTATACGACTATGGTGTCTTCACTTTGTAAAGCGGGTAAGATCGACGATGCTAGAGAGCTAGCGGGAAGATTTAAACCAAGTGTTCCTGTTTATAATGCTTTGATTCATGGGACGTGCAAAGAAGGAAGAGTTGAGGTAGCGATCAAGTTGTTAGGTGAAATGATGGAAAATGGAGTTGACCCTAATGTGATCTCATATTCGTGTATTATAAATTCTCTTTGCGAGTCGGGAAATGTTGAGTCGGCTTTTGCATTATTGGCTCAAATGTTTTCTAGAGGTTGTAGTGCCAATATCCAAACCTTTACGCCATTGATCAGGGGTTGTTTCATGAGAGGGAGATTCTATGAAGCTCTTGAATTGTGGAAGCTTATGATAAAGGATGGTTATGAGCCAAATGTAGTCGCTTACAACACTCTTATTCATGGTCTTTGCAATAGTGGGAGTTTGGTAGAAGCCTTACAAGTATGTGATCAATTGGAGAGGAGTGGTTGTCTCTCTAATGTGATTACTTACAGCATTCTAATTGATGGTTTTGCAAAAGCTGGTGATTTGGTTGGTGCATCTGAGACATGGAATAGGATGATATCCCATGGTTGTTGTCCTAATGTGGTGGCCTATACCTGCATGGTGGATGTCCTTTGTAAAAATTGGATGTTTGACCAAGCCAATTCTATTATGGAGAAGATGACTCTTGAGGGCTGTACTCCAAATACTGTAACATTTAACACGTTCATCAAAGGTTTGTGTAGAAATGGAAGAGTAGAATGGGCAATGAAAGTGCTTGATCGAATGCAAGGACATGGGTGTCTCCCTAATATCACAACTTACAATGAGTTACTTGATGCTCTATTCAGGACGAACAAGTACGCAGAGGCTTTCGGGCTTTTCCAGGAGATTGAAAAGGGAAATTTACAGCCAAACTTAGTGACTTATAATACCATTTTATATGGTTTTTCTCGAGCTGGCATGCTTGGAGAGGCGCTGCAACTTTTTTGTAAAGTACTTGTGGGTGGCACTACCCCGGATGCCATCACATATAATACAATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGACTGCAGTTCAGCTGGTGGAACGAGTTAGAACTATGAAGGAGTGGCATCCAGATATCATCACATACACTATCCTCATATGGGGTGCCTGCAATTGGATAAATATAGAAGAAGCCATTACTTATCTTCACAAGGCAATGAATCAAGGAATCTGCCCCAACTTTGCCACATGGAATGTATTGGTTTGGTGTTTCTTTGACTCTTTAGGTCATATGGGTCCAATTCACATTTTGGACGATATTCTGGGAAAGCGAGTTCTTAAGGATGCTTGGGCAGGTTATGCTCTTCTTGGCTTACTCTTTAAATTGACTAGCGGGGAATCAAATTCTATGGCATATGCCCAATTGGAGCAACATGCCAATGTTGAGTTTTTCTGGCACCTTTTTGTTATCATGGATGGTATCTTCTCGCCCGTGGAATACCTTCTTGGAGACAGCAGATTCGAGTTTTGGATTTCCTCCCGCATAAGGAACCAGGCTATGGTGGTAATTCAAGCCATCAGCACAAGGGTCAAAAGGTGGTCTCAACCGGCGGCCAAATGCTCTATCCATCACTTTGGAATATGA

Protein sequence

MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLQESDVLKQLKRERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDILGKRVLKDAWAGYALLGLLFKLTSGESNSMAYAQLEQHANVEFFWHLFVIMDGIFSPVEYLLGDSRFEFWISSRIRNQAMVVIQAISTRVKRWSQPAAKCSIHHFGI
Homology
[Close]
BLAST of CmaCh08G012930 vs. Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 9.6e-202
Identity = 349/663 (52.64%), Postives = 471/663 (71.04%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN---PREPNKQHLLQESDVLKQLKRERNLSSA 60
           MYLKEGCSLLLK+QKPL+PFVLN++  +N      PN   + +E DV+K+L++E  +  A
Sbjct: 1   MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEI-KELDVVKRLRQESCVPLA 60

Query: 61  LQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIIN 120
           L +F ++ANSN FKHT  T+++MI KL  + ++D VQY+LQQMK+ G +C EDLF+S+I+
Sbjct: 61  LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 120

Query: 121 SHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIP 180
            +++ G AE+A++M YRI EFGC P+VKIYNH+LD LL ENR QMI  +Y +MK+DG  P
Sbjct: 121 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 180

Query: 181 NVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELA 240
           NVFTYN+LLKALCKN++VD A KL VEMS+KGC PDAVSYTT++SS+C+ G + + RELA
Sbjct: 181 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA 240

Query: 241 GRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVES 300
            RF+P V VYNALI+G CKE   + A +L+ EM+E G+ PNVISYS +IN LC SG +E 
Sbjct: 241 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 300

Query: 301 AFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKD-GYEPNVVAYNTLI 360
           AF+ L QM  RGC  NI T + L++GCF+RG  ++AL+LW  MI+  G +PNVVAYNTL+
Sbjct: 301 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 360

Query: 361 HGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCC 420
            G C+ G++V+A+ V   +E  GC  N+ TY  LI+GFAK G L GA   WN+M++ GCC
Sbjct: 361 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 420

Query: 421 PNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNVV YT MV+ LC++  F +A S++E M+ E C P+  TFN FIKGLC  GR++WA KV
Sbjct: 421 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 480

Query: 481 LDRM-QGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFS 540
             +M Q H C PNI TYNELLD L + N+  EA+GL +EI    ++ +  TYNT+L+G  
Sbjct: 481 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 540

Query: 541 RAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRT-MKEWHPD 600
            AG+ G ALQL  K++V G +PD IT N +I AYCKQGK + A Q+++ V    ++W PD
Sbjct: 541 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 600

Query: 601 IITYTILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILD 658
           +I+YT +IWG C     E+ +  L + ++ GI P+ ATW+VL+ CF           ILD
Sbjct: 601 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF-----------ILD 651

[Close]
BLAST of CmaCh08G012930 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.0e-94
Identity = 198/631 (31.38%), Postives = 329/631 (52.14%), Query Frame = 1 

Query: 14  QKPLMPFVLNSSPIINPREPNKQHLLQESDVLKQLKRERNLSSALQYFCAVANSNAFKHT 73
           +K L PF L+S         N  H +    + K L+   N+S++++ F    + N ++H+
Sbjct: 58  EKLLKPFDLDSLR-------NSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHS 117

Query: 74  ASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKMLY 133
              Y+++I KLG   E   +  +L QMK +G+   E LF+SI+  + +AG   Q  +++ 
Sbjct: 118 FDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 177

Query: 134 RIGE-FGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPNVFTYNILLKALCKN 193
            +   + C+PT K YN +L+ L++ N  ++   ++ +M    + P +FT+ +++KA C  
Sbjct: 178 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 237

Query: 194 DRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVY 253
           + +D+A  L  +M+  GC P++V Y T++ SL K  ++++A +L          P    +
Sbjct: 238 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 297

Query: 254 NALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESAFALLAQMFS 313
           N +I G CK  R+  A K++  M+  G  P+ I+Y  ++N LC+ G V++A      +F 
Sbjct: 298 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFY 357

Query: 314 RGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKD-GYEPNVVAYNTLIHGLCNSGSLV 373
           R     I  F  LI G    GR  +A  +   M+   G  P+V  YN+LI+G    G + 
Sbjct: 358 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 417

Query: 374 EALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMV 433
            AL+V   +   GC  NV +Y+IL+DGF K G +  A    N M + G  PN V + C++
Sbjct: 418 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 477

Query: 434 DVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHGCL 493
              CK     +A  I  +M  +GC P+  TFN+ I GLC    ++ A+ +L  M   G +
Sbjct: 478 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 537

Query: 494 PNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQL 553
            N  TYN L++A  R  +  EA  L  E+       + +TYN+++ G  RAG + +A  L
Sbjct: 538 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 597

Query: 554 FCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTILIWGAC 613
           F K+L  G  P  I+ N +I+  C+ G V+ AV+  ++   ++   PDI+T+  LI G C
Sbjct: 598 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF-QKEMVLRGSTPDIVTFNSLINGLC 657

Query: 614 NWINIEEAITYLHKAMNQGICPNFATWNVLV 638
               IE+ +T   K   +GI P+  T+N L+
Sbjct: 658 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676

[Close]
BLAST of CmaCh08G012930 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.9e-81
Identity = 183/600 (30.50%), Postives = 306/600 (51.00%), Query Frame = 1 

Query: 39  LQESDV--LKQLKRERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYI 98
           L  +DV  L  L+ + + S+AL+ F   +    F    + Y+ ++ +LGR    D ++ I
Sbjct: 46  LSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKI 105

Query: 99  LQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKML-YRIGEFGCKPTVKIYNHLLDALL 158
           L+ MK          F+ +I S+ +    ++ L ++ + I EFG KP    YN +L+ L+
Sbjct: 106 LEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV 165

Query: 159 TENRFQMINPLYINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAV 218
             N  +++   +  M   G+ P+V T+N+L+KALC+  ++  A  +  +M S G  PD  
Sbjct: 166 DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEK 225

Query: 219 SYTTMVSSLCKAGKIDDA---RELAGRFKPS---VPVYNALIHGTCKEGRVEVAIKLLGE 278
           ++TT++    + G +D A   RE    F  S   V V N ++HG CKEGRVE A+  + E
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQE 285

Query: 279 MM-ENGVDPNVISYSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRG 338
           M  ++G  P+  +++ ++N LC++G+V+ A  ++  M   G   ++ T+  +I G    G
Sbjct: 286 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 345

Query: 339 RFYEALELWKLMIKDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYS 398
              EA+E+   MI     PN V YNTLI  LC    + EA ++   L   G L +V T++
Sbjct: 346 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 405

Query: 399 ILIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLE 458
            LI G     +   A E +  M S GC P+   Y  ++D LC     D+A +++++M L 
Sbjct: 406 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 465

Query: 459 GCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEA 518
           GC  + +T+NT I G C+  +   A ++ D M+ HG   N  TYN L+D L ++ +  +A
Sbjct: 466 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 525

Query: 519 FGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHA 578
             L  ++     +P+  TYN++L  F R G + +A  +   +   G  PD +TY T+I  
Sbjct: 526 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 585

Query: 579 YCKQGKVKTAVQLVERVRTMKEWHPDIITYTILIWGACNWINIEEAITYLHKAMNQGICP 629
            CK G+V+ A +L+  ++ MK  +     Y  +I G        EAI    + + Q   P
Sbjct: 586 LCKAGRVEVASKLLRSIQ-MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

[Close]
BLAST of CmaCh08G012930 vs. Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.4e-80
Identity = 168/604 (27.81%), Postives = 307/604 (50.83%), Query Frame = 1 

Query: 48  LKRERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMD-GVN 107
           +K +++   AL+ F ++     FKHT STY+ +IEKLG   + + ++ +L  M+ + G +
Sbjct: 14  IKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNH 73

Query: 108 CCEDLFVSIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPL 167
             E ++V  + ++ R G  ++A+ +  R+  + C+PTV  YN ++  L+    F   + +
Sbjct: 74  MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV 133

Query: 168 YINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCK 227
           Y+ M+  G+ P+V+++ I +K+ CK  R  AA +L   MSS+GC  + V+Y T+V    +
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193

Query: 228 AGKIDDARELAGRFKPS-----VPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVIS 287
                +  EL G+   S     +  +N L+   CK+G V+   KLL ++++ GV PN+ +
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253

Query: 288 YSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMI 347
           Y+  I  LC+ G ++ A  ++  +  +G   ++ T+  LI G     +F EA      M+
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313

Query: 348 KDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLV 407
            +G EP+   YNTLI G C  G +  A ++      +G + +  TY  LIDG    G+  
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373

Query: 408 GASETWNRMISHGCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFI 467
            A   +N  +  G  PNV+ Y  ++  L    M  +A  +  +M+ +G  P   TFN  +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433

Query: 468 KGLCRNGRVEWAMKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQ 527
            GLC+ G V  A  ++  M   G  P+I T+N L+       K   A  +   +    + 
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493

Query: 528 PNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQL 587
           P++ TYN++L G  +     + ++ +  ++  G  P+  T+N ++ + C+  K+  A+ L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553

Query: 588 VERVRTMKEWHPDIITYTILIWGACNWINIEEAITYLHKAMN-QGICPNFATWNVLVWCF 645
           +E ++  K  +PD +T+  LI G C   +++ A T   K      +  +  T+N+++  F
Sbjct: 554 LEEMKN-KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 613

[Close]
BLAST of CmaCh08G012930 vs. Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.6e-77
Identity = 169/541 (31.24%), Postives = 273/541 (50.46%), Query Frame = 1 

Query: 54  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFV 113
           L  A+  F  +  S  F       KL+   + +  + D+V  + +QM+  G++     + 
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLL-SAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 121

Query: 114 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKD 173
            +IN   R      AL +L ++ + G +P +   N LL+     NR      L   M + 
Sbjct: 122 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 181

Query: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 233
           G  P+ FT+N L+  L +++R   A  L   M  KGC PD V+Y  +V+ LCK G ID A
Sbjct: 182 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 241

Query: 234 RELA-----GRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINS 293
             L      G+ +P V +YN +I   C    V  A+ L  EM   G+ PNV++Y+ +I  
Sbjct: 242 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 301

Query: 294 LCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPN 353
           LC  G    A  LL+ M  R  + N+ TF+ LI      G+  EA +L+  MIK   +P+
Sbjct: 302 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 361

Query: 354 VVAYNTLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWN 413
           +  Y++LI+G C    L EA  + + +    C  NV+TY+ LI GF KA  +    E + 
Sbjct: 362 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 421

Query: 414 RMISHGCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNG 473
            M   G   N V YT ++    +    D A  + ++M  +G  P+ +T++  + GLC NG
Sbjct: 422 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 481

Query: 474 RVEWAMKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYN 533
           +VE A+ V + +Q     P+I TYN +++ + +  K  + + LF  +    ++PN+VTY 
Sbjct: 482 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 541

Query: 534 TILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTM 590
           T++ GF R G+  EA  LF ++   G  PD+ TYNT+I A+ + G    + +L+  +R+ 
Sbjct: 542 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 601

[Close]
BLAST of CmaCh08G012930 vs. TrEMBL
Match: A0A0A0KCK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G324890 PE=4 SV=1)

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 568/659 (86.19%), Postives = 614/659 (93.17%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLQESDVLKQLKRERNLSSALQY 60
           MYLKEG SLL+KIQKPL+PFVLNS+PIINPR+PNKQ LLQESDVLK+LK +RNLSS L +
Sbjct: 1   MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGF 60

Query: 61  FCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINSHK 120
           F A+ANSNAF+HTASTY++MIE+LGRECEMD+VQYILQQMKMDG+NCCEDLF+ IIN +K
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 121 RAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPNVF 180
           R GSAEQALKM YRIGEFGCKPTV+IYNHLLDALL+EN+FQMINPLY NMKKDGLIPNVF
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 181 TYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF 240
           TYNILLKALCKNDRVDAAHKLFVEMS+KGCPPDAV+YTTMVSSLCKAGKIDDARELAGRF
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 241 KPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESAFA 300
           KPSVPVYNALI G CKEGR+EVAIKLLGEMM+NGVDPNV+SYSCIINSLC SGNVE AFA
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 301 LLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLIHGLC 360
           L AQMF RGC ANI TFTPLI+GCFMRG+ YEAL+LWKLMI+DG EPNVVAYNTLIHGLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 361 NSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPNVV 420
           ++GSL EALQVCDQ++RSGCL NV TYSILIDGFAK+GDLVGASETWNRMISHGC PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 421 AYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRM 480
            YTCMVDVLCKN MFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RM
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 481 QGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGML 540
           QGHGCLPNITTYNELLDALFR NKY EAFGLFQEIE  NLQPNLVTYNT+LYGFSRAGM+
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 541 GEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTI 600
           GEALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEWHPDIITYT 
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 601 LIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDILGK 660
           LIWGACNW+NIEEA+ +L KA+NQGICPNFATWN LV CFFDSLGHMGPIHILDDIL K
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659

[Close]
BLAST of CmaCh08G012930 vs. TrEMBL
Match: V4S1G4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004501mg PE=4 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 5.8e-254
Identity = 424/661 (64.15%), Postives = 531/661 (80.33%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINP-REPNKQHLLQESDVLKQLKRERNLSSALQ 60
           MYLK+GCSL+LK QKP +PFVLN++PI N   + NK   + E  V K+L++E N++SAL 
Sbjct: 1   MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENKYTHVDEFRVSKRLRQEPNIASALN 60

Query: 61  YFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINSH 120
           YF ++ANSN FKHTA TY++MIEKLG +CE+D VQY+LQQMK++GV+C E +FVS+INS+
Sbjct: 61  YFKSIANSNTFKHTALTYQVMIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFVSVINSY 120

Query: 121 KRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPNV 180
           +R G AEQALKM YRI EFG KPTVKIYNH+LDALL ENRF MINP+Y NMK+DG+ PNV
Sbjct: 121 RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 180

Query: 181 FTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGR 240
           FTYNILLKALCKN+RVD A+KL VEM +KGC PDAVSYTT+VSS+CK G++++ARELA R
Sbjct: 181 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSMCKLGQVEEARELAMR 240

Query: 241 FKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESAF 300
           F   V VYNALI+G CKE R+E A  LL EM++ G+DPNVI+YS II+SLC+ GNVE++ 
Sbjct: 241 FGSGVSVYNALINGLCKEHRIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 300

Query: 301 ALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLIHGL 360
            +L QMF RGC+ NI +FT L++G  + GR +EA +LW  MI++G+ PNVVAY+TLIHGL
Sbjct: 301 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 360

Query: 361 CNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPNV 420
           C++GS+ EA+ V  Q+E + C  NV TYS LIDGFAKAG+L+GAS+ WNRMIS+GC PNV
Sbjct: 361 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 420

Query: 421 VAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDR 480
           VAYTCMV VLC+N MF QA+S++EKM  E C PNTVTFNTFIKGLC  GRV+WAMK+LD+
Sbjct: 421 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 480

Query: 481 MQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGM 540
           M+ + CLPNITTYNELLD L R N+  EAF L  EIEK  +Q N+VTYNTIL+G  RAGM
Sbjct: 481 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 540

Query: 541 LGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYT 600
           + EA QL  K+L+ GT  DAIT+N +I+AYCKQGKV  A+QL++R+R   EW+PDII+YT
Sbjct: 541 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 600

Query: 601 ILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDILGK 660
            L+WG CN   ++EA  YL K +N+GICPNFATWNVLV   F +LGH+GP++ILDDI+  
Sbjct: 601 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 660

[Close]
BLAST of CmaCh08G012930 vs. TrEMBL
Match: A0A067JVP2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19037 PE=4 SV=1)

HSP 1 Score: 877.1 bits (2265), Expect = 1.6e-251
Identity = 414/661 (62.63%), Postives = 528/661 (79.88%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN----PREPNKQHLLQESDVLKQLKRERNLSS 60
           MYLKEG SLLLK++KP +PFVLN++PI+N    PR    +  L+E +VLK+L+ E ++  
Sbjct: 1   MYLKEGHSLLLKVRKPAIPFVLNTNPILNSNNKPRNEQNEANLKEYEVLKRLRSESSIVL 60

Query: 61  ALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSII 120
           A+ YF ++ANS AF+HT  TY+ MIEKLG E ++D VQY+LQQMK++G+ C EDLF+S+I
Sbjct: 61  AVDYFKSIANSQAFQHTPLTYQTMIEKLGIEGDVDGVQYLLQQMKLEGICCSEDLFISVI 120

Query: 121 NSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLI 180
           N+++R G AEQALK  YRIGE GCKPTVKIYNHLLDALL+ENRFQMINP+Y NMK+DG+ 
Sbjct: 121 NTYRRVGLAEQALKTFYRIGELGCKPTVKIYNHLLDALLSENRFQMINPIYSNMKRDGME 180

Query: 181 PNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDAREL 240
           PNV+TYNILLKALCKN+R+D A KL VEMS+KGC PD VSYTT++SS+CK GK+++AR+L
Sbjct: 181 PNVYTYNILLKALCKNNRIDGACKLLVEMSNKGCNPDVVSYTTVISSMCKLGKVEEARKL 240

Query: 241 AGRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVE 300
           A RF+PSVP+YNALI G CKE R++ A +LLG+M++ G++PNVI+YS +IN L   GNVE
Sbjct: 241 AMRFQPSVPIYNALIQGFCKEYRIKEAFQLLGQMVDKGIEPNVITYSTVINFLAHVGNVE 300

Query: 301 SAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLI 360
           SA A+ A+MF RGCS NI TFT LI+G F+ GR YEAL++W  MI++G+EPN+VAYNTLI
Sbjct: 301 SALAVWAKMFVRGCSPNIHTFTSLIKGYFLGGRVYEALDIWNRMIQEGFEPNIVAYNTLI 360

Query: 361 HGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCC 420
           HGLC+ G   EA  V  ++E +GC  NV TYS LIDGFA+A D VGASETWNRM+++GC 
Sbjct: 361 HGLCSHGKTREAFSVSLKMEGNGCSPNVTTYSALIDGFAEADDFVGASETWNRMMTNGCI 420

Query: 421 PNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNVV YTCMVDVLC+N MF+QA  ++EKM  + C PNT+TFN FIKGLC +G VEWA K+
Sbjct: 421 PNVVVYTCMVDVLCRNSMFNQAQCLIEKMVNDNCPPNTITFNIFIKGLCCHGSVEWAKKM 480

Query: 481 LDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSR 540
           L++M  +GC PN+TTYNELL+ LF+ N+  EA GL +EIE+  ++PNLVT+NTIL GF  
Sbjct: 481 LNQMGKYGCSPNVTTYNELLNGLFKENRTKEALGLIREIEENGIEPNLVTFNTILSGFCH 540

Query: 541 AGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDII 600
           A M  EAL+L  K+L+ G  PDAITYNT+I+AYCKQGK KTA++LV+R+    EW+PDII
Sbjct: 541 AEMFEEALKLLGKMLIVGLKPDAITYNTLIYAYCKQGKAKTAIKLVDRLSARGEWYPDII 600

Query: 601 TYTILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDI 658
             T L+WG CN I ++EAI Y  K +++GICPN ATWNVLV   F+SLGH+GPI+ILDDI
Sbjct: 601 ACTSLLWGICNQIGVDEAIRYFGKMLDEGICPNVATWNVLVRGLFNSLGHLGPIYILDDI 660

[Close]
BLAST of CmaCh08G012930 vs. TrEMBL
Match: F6H707_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00600 PE=4 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 8.9e-247
Identity = 414/656 (63.11%), Postives = 520/656 (79.27%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPN--KQHLLQESDVLKQLKRERNLSSAL 60
           M+LKEGCSLLLK++KP +PFVL+++P+ N +  N  K  +L+E+DVLK+LK E +++ AL
Sbjct: 1   MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60

Query: 61  QYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINS 120
           +YF ++ANS +FKHT  TY++MIEKL  E EMD VQY+LQQMK++G++C EDLF+S+I S
Sbjct: 61  EYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGS 120

Query: 121 HKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPN 180
           ++RAGS+EQALK  YR+ +F  KPTVKIYNH+LDALL ENRFQMINP+Y NMKKDG+ PN
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180

Query: 181 VFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAG 240
           VFTYNILLKALCKN+RVD AHKL VEMSSKGC PD VSYTT++SSLCK GK+ +ARELA 
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM 240

Query: 241 RFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESA 300
            F PSVPVYNALI+G CKE   E A +LL EMM  G+DPNVISY+ IIN+L ++GNVE +
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELS 300

Query: 301 FALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLIHG 360
            A+LA+MF+RGCS N+ TFT LI+G F++G  +EAL+ W  MI++G  PNVVAYN L+HG
Sbjct: 301 LAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHG 360

Query: 361 LCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPN 420
           LC+  SL +A+ V +Q+E +GC  NV TYS LIDG+AKAGDL GASE WN MI+HGC PN
Sbjct: 361 LCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN 420

Query: 421 VVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLD 480
           VVAYTCMVDVLC+N MF+QA  ++E M +E C PNTVTFNTFIKGLC +GRV+WA+KV D
Sbjct: 421 VVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFD 480

Query: 481 RMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAG 540
           +M   GC PN TTYNELLD+L +  ++ EAFGL +++E   ++ NLVTYNTI+YG+  AG
Sbjct: 481 QMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAG 540

Query: 541 MLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITY 600
           MLGEAL+L  K++V GT PDAIT N +I AYCKQGKV  A+QL++R+   K WHPDII Y
Sbjct: 541 MLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK-WHPDIIAY 600

Query: 601 TILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILD 655
           T LI G C  I +EEAI YL + +++GI PN ATWNVLV   F ++GH G +  LD
Sbjct: 601 TSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655

[Close]
BLAST of CmaCh08G012930 vs. TrEMBL
Match: B9HX52_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0010s15860g PE=4 SV=2)

HSP 1 Score: 855.1 bits (2208), Expect = 6.4e-245
Identity = 410/659 (62.22%), Postives = 518/659 (78.60%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINP--REPNKQHLLQESDVLKQLKRERNLSSAL 60
           MYLKEGCSLLLK QKPL+PFVLN+   INP   E    +LL+ES+VL +LK E N+  AL
Sbjct: 1   MYLKEGCSLLLKKQKPLVPFVLNT---INPLQNEQKDLNLLKESEVLNKLKNEPNILLAL 60

Query: 61  QYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINS 120
            +F ++ANSN+FKHT  TY  MI++LG E ++D +QY+LQ MK++G++C EDLFV +IN+
Sbjct: 61  HFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINA 120

Query: 121 HKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPN 180
           ++RAG AEQALK  YRIGEFGCKP+VKIYNH+LDALL+EN+FQMIN +Y NMK+DG+  N
Sbjct: 121 YRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELN 180

Query: 181 VFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAG 240
           V+TYN+LLKALCKN+RVDAA KL  EMS KGC PDAVSYTT+VSS+C+ GK+++AREL+ 
Sbjct: 181 VYTYNMLLKALCKNNRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 240

Query: 241 RFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESA 300
           R K  VPVYNALI+G C+E ++E   +L  EM   G+DP+VI+YS +IN+L E GNVE A
Sbjct: 241 RIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMA 300

Query: 301 FALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLIHG 360
            A+LA+MF RGCS N+ TFT L++G FM GR  EAL+LW  MI++G EPN VAYNTLIHG
Sbjct: 301 LAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG 360

Query: 361 LCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPN 420
           LC+ G +VEA+ V  ++ER+G   N  TYS LIDGFAKAGDLVGASE WN+MI++GC PN
Sbjct: 361 LCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 420

Query: 421 VVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLD 480
           VV YTCMVDVLC+N MF+ A  ++E M    C PNT+TFNTFIKGLC +G+ EWAMKVL+
Sbjct: 421 VVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 480

Query: 481 RMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAG 540
           +M+ +GC PN+TTYNE+LD LF   +  EA  +  EIE+  ++ NLVTYNTIL GF  AG
Sbjct: 481 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 540

Query: 541 MLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITY 600
           M   ALQ+  K+LVGGT PD+ITYNT+I+AYCKQG+VKTA+QLV+R+    E +PD+ TY
Sbjct: 541 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTY 600

Query: 601 TILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDIL 658
           T L+WG CNWI ++EA+ +L K +N+GICPN ATWN LV   F  LGH+GPIHI+D+IL
Sbjct: 601 TSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNIL 656

[Close]
BLAST of CmaCh08G012930 vs. TAIR10
Match: AT3G48810.1 (AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 704.9 bits (1818), Expect = 5.4e-203
Identity = 349/663 (52.64%), Postives = 471/663 (71.04%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN---PREPNKQHLLQESDVLKQLKRERNLSSA 60
           MYLKEGCSLLLK+QKPL+PFVLN++  +N      PN   + +E DV+K+L++E  +  A
Sbjct: 1   MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEI-KELDVVKRLRQESCVPLA 60

Query: 61  LQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIIN 120
           L +F ++ANSN FKHT  T+++MI KL  + ++D VQY+LQQMK+ G +C EDLF+S+I+
Sbjct: 61  LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 120

Query: 121 SHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIP 180
            +++ G AE+A++M YRI EFGC P+VKIYNH+LD LL ENR QMI  +Y +MK+DG  P
Sbjct: 121 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 180

Query: 181 NVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELA 240
           NVFTYN+LLKALCKN++VD A KL VEMS+KGC PDAVSYTT++SS+C+ G + + RELA
Sbjct: 181 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA 240

Query: 241 GRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVES 300
            RF+P V VYNALI+G CKE   + A +L+ EM+E G+ PNVISYS +IN LC SG +E 
Sbjct: 241 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 300

Query: 301 AFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKD-GYEPNVVAYNTLI 360
           AF+ L QM  RGC  NI T + L++GCF+RG  ++AL+LW  MI+  G +PNVVAYNTL+
Sbjct: 301 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 360

Query: 361 HGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCC 420
            G C+ G++V+A+ V   +E  GC  N+ TY  LI+GFAK G L GA   WN+M++ GCC
Sbjct: 361 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 420

Query: 421 PNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNVV YT MV+ LC++  F +A S++E M+ E C P+  TFN FIKGLC  GR++WA KV
Sbjct: 421 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 480

Query: 481 LDRM-QGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFS 540
             +M Q H C PNI TYNELLD L + N+  EA+GL +EI    ++ +  TYNT+L+G  
Sbjct: 481 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 540

Query: 541 RAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRT-MKEWHPD 600
            AG+ G ALQL  K++V G +PD IT N +I AYCKQGK + A Q+++ V    ++W PD
Sbjct: 541 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 600

Query: 601 IITYTILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILD 658
           +I+YT +IWG C     E+ +  L + ++ GI P+ ATW+VL+ CF           ILD
Sbjct: 601 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF-----------ILD 651

[Close]
BLAST of CmaCh08G012930 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 347.8 bits (891), Expect = 1.7e-95
Identity = 198/631 (31.38%), Postives = 329/631 (52.14%), Query Frame = 1 

Query: 14  QKPLMPFVLNSSPIINPREPNKQHLLQESDVLKQLKRERNLSSALQYFCAVANSNAFKHT 73
           +K L PF L+S         N  H +    + K L+   N+S++++ F    + N ++H+
Sbjct: 58  EKLLKPFDLDSLR-------NSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHS 117

Query: 74  ASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKMLY 133
              Y+++I KLG   E   +  +L QMK +G+   E LF+SI+  + +AG   Q  +++ 
Sbjct: 118 FDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 177

Query: 134 RIGE-FGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPNVFTYNILLKALCKN 193
            +   + C+PT K YN +L+ L++ N  ++   ++ +M    + P +FT+ +++KA C  
Sbjct: 178 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 237

Query: 194 DRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVY 253
           + +D+A  L  +M+  GC P++V Y T++ SL K  ++++A +L          P    +
Sbjct: 238 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 297

Query: 254 NALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESAFALLAQMFS 313
           N +I G CK  R+  A K++  M+  G  P+ I+Y  ++N LC+ G V++A      +F 
Sbjct: 298 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFY 357

Query: 314 RGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKD-GYEPNVVAYNTLIHGLCNSGSLV 373
           R     I  F  LI G    GR  +A  +   M+   G  P+V  YN+LI+G    G + 
Sbjct: 358 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 417

Query: 374 EALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMV 433
            AL+V   +   GC  NV +Y+IL+DGF K G +  A    N M + G  PN V + C++
Sbjct: 418 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 477

Query: 434 DVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHGCL 493
              CK     +A  I  +M  +GC P+  TFN+ I GLC    ++ A+ +L  M   G +
Sbjct: 478 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 537

Query: 494 PNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQL 553
            N  TYN L++A  R  +  EA  L  E+       + +TYN+++ G  RAG + +A  L
Sbjct: 538 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 597

Query: 554 FCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTILIWGAC 613
           F K+L  G  P  I+ N +I+  C+ G V+ AV+  ++   ++   PDI+T+  LI G C
Sbjct: 598 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF-QKEMVLRGSTPDIVTFNSLINGLC 657

Query: 614 NWINIEEAITYLHKAMNQGICPNFATWNVLV 638
               IE+ +T   K   +GI P+  T+N L+
Sbjct: 658 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676

[Close]
BLAST of CmaCh08G012930 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 303.9 bits (777), Expect = 2.8e-82
Identity = 183/600 (30.50%), Postives = 306/600 (51.00%), Query Frame = 1 

Query: 39  LQESDV--LKQLKRERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYI 98
           L  +DV  L  L+ + + S+AL+ F   +    F    + Y+ ++ +LGR    D ++ I
Sbjct: 46  LSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKI 105

Query: 99  LQQMKMDGVNCCEDLFVSIINSHKRAGSAEQALKML-YRIGEFGCKPTVKIYNHLLDALL 158
           L+ MK          F+ +I S+ +    ++ L ++ + I EFG KP    YN +L+ L+
Sbjct: 106 LEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV 165

Query: 159 TENRFQMINPLYINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAV 218
             N  +++   +  M   G+ P+V T+N+L+KALC+  ++  A  +  +M S G  PD  
Sbjct: 166 DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEK 225

Query: 219 SYTTMVSSLCKAGKIDDA---RELAGRFKPS---VPVYNALIHGTCKEGRVEVAIKLLGE 278
           ++TT++    + G +D A   RE    F  S   V V N ++HG CKEGRVE A+  + E
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQE 285

Query: 279 MM-ENGVDPNVISYSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRG 338
           M  ++G  P+  +++ ++N LC++G+V+ A  ++  M   G   ++ T+  +I G    G
Sbjct: 286 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 345

Query: 339 RFYEALELWKLMIKDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYS 398
              EA+E+   MI     PN V YNTLI  LC    + EA ++   L   G L +V T++
Sbjct: 346 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 405

Query: 399 ILIDGFAKAGDLVGASETWNRMISHGCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLE 458
            LI G     +   A E +  M S GC P+   Y  ++D LC     D+A +++++M L 
Sbjct: 406 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 465

Query: 459 GCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEA 518
           GC  + +T+NT I G C+  +   A ++ D M+ HG   N  TYN L+D L ++ +  +A
Sbjct: 466 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 525

Query: 519 FGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHA 578
             L  ++     +P+  TYN++L  F R G + +A  +   +   G  PD +TY T+I  
Sbjct: 526 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 585

Query: 579 YCKQGKVKTAVQLVERVRTMKEWHPDIITYTILIWGACNWINIEEAITYLHKAMNQGICP 629
            CK G+V+ A +L+  ++ MK  +     Y  +I G        EAI    + + Q   P
Sbjct: 586 LCKAGRVEVASKLLRSIQ-MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

[Close]
BLAST of CmaCh08G012930 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 300.4 bits (768), Expect = 3.1e-81
Identity = 168/604 (27.81%), Postives = 307/604 (50.83%), Query Frame = 1 

Query: 48  LKRERNLSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMD-GVN 107
           +K +++   AL+ F ++     FKHT STY+ +IEKLG   + + ++ +L  M+ + G +
Sbjct: 14  IKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNH 73

Query: 108 CCEDLFVSIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPL 167
             E ++V  + ++ R G  ++A+ +  R+  + C+PTV  YN ++  L+    F   + +
Sbjct: 74  MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV 133

Query: 168 YINMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCK 227
           Y+ M+  G+ P+V+++ I +K+ CK  R  AA +L   MSS+GC  + V+Y T+V    +
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193

Query: 228 AGKIDDARELAGRFKPS-----VPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVIS 287
                +  EL G+   S     +  +N L+   CK+G V+   KLL ++++ GV PN+ +
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253

Query: 288 YSCIINSLCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMI 347
           Y+  I  LC+ G ++ A  ++  +  +G   ++ T+  LI G     +F EA      M+
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313

Query: 348 KDGYEPNVVAYNTLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLV 407
            +G EP+   YNTLI G C  G +  A ++      +G + +  TY  LIDG    G+  
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373

Query: 408 GASETWNRMISHGCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFI 467
            A   +N  +  G  PNV+ Y  ++  L    M  +A  +  +M+ +G  P   TFN  +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433

Query: 468 KGLCRNGRVEWAMKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQ 527
            GLC+ G V  A  ++  M   G  P+I T+N L+       K   A  +   +    + 
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493

Query: 528 PNLVTYNTILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQL 587
           P++ TYN++L G  +     + ++ +  ++  G  P+  T+N ++ + C+  K+  A+ L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553

Query: 588 VERVRTMKEWHPDIITYTILIWGACNWINIEEAITYLHKAMN-QGICPNFATWNVLVWCF 645
           +E ++  K  +PD +T+  LI G C   +++ A T   K      +  +  T+N+++  F
Sbjct: 554 LEEMKN-KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 613

[Close]
BLAST of CmaCh08G012930 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 289.7 bits (740), Expect = 5.4e-78
Identity = 169/541 (31.24%), Postives = 273/541 (50.46%), Query Frame = 1 

Query: 54  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFV 113
           L  A+  F  +  S  F       KL+   + +  + D+V  + +QM+  G++     + 
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLL-SAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 121

Query: 114 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKD 173
            +IN   R      AL +L ++ + G +P +   N LL+     NR      L   M + 
Sbjct: 122 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 181

Query: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 233
           G  P+ FT+N L+  L +++R   A  L   M  KGC PD V+Y  +V+ LCK G ID A
Sbjct: 182 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 241

Query: 234 RELA-----GRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINS 293
             L      G+ +P V +YN +I   C    V  A+ L  EM   G+ PNV++Y+ +I  
Sbjct: 242 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 301

Query: 294 LCESGNVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPN 353
           LC  G    A  LL+ M  R  + N+ TF+ LI      G+  EA +L+  MIK   +P+
Sbjct: 302 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 361

Query: 354 VVAYNTLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWN 413
           +  Y++LI+G C    L EA  + + +    C  NV+TY+ LI GF KA  +    E + 
Sbjct: 362 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 421

Query: 414 RMISHGCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNG 473
            M   G   N V YT ++    +    D A  + ++M  +G  P+ +T++  + GLC NG
Sbjct: 422 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 481

Query: 474 RVEWAMKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYN 533
           +VE A+ V + +Q     P+I TYN +++ + +  K  + + LF  +    ++PN+VTY 
Sbjct: 482 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 541

Query: 534 TILYGFSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTM 590
           T++ GF R G+  EA  LF ++   G  PD+ TYNT+I A+ + G    + +L+  +R+ 
Sbjct: 542 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 601

[Close]
BLAST of CmaCh08G012930 vs. NCBI nr
Match: gi|449462136|ref|XP_004148797.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis sativus])

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 568/659 (86.19%), Postives = 614/659 (93.17%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLQESDVLKQLKRERNLSSALQY 60
           MYLKEG SLL+KIQKPL+PFVLNS+PIINPR+PNKQ LLQESDVLK+LK +RNLSS L +
Sbjct: 1   MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGF 60

Query: 61  FCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINSHK 120
           F A+ANSNAF+HTASTY++MIE+LGRECEMD+VQYILQQMKMDG+NCCEDLF+ IIN +K
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 121 RAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPNVF 180
           R GSAEQALKM YRIGEFGCKPTV+IYNHLLDALL+EN+FQMINPLY NMKKDGLIPNVF
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 181 TYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF 240
           TYNILLKALCKNDRVDAAHKLFVEMS+KGCPPDAV+YTTMVSSLCKAGKIDDARELAGRF
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 241 KPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESAFA 300
           KPSVPVYNALI G CKEGR+EVAIKLLGEMM+NGVDPNV+SYSCIINSLC SGNVE AFA
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 301 LLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLIHGLC 360
           L AQMF RGC ANI TFTPLI+GCFMRG+ YEAL+LWKLMI+DG EPNVVAYNTLIHGLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 361 NSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPNVV 420
           ++GSL EALQVCDQ++RSGCL NV TYSILIDGFAK+GDLVGASETWNRMISHGC PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 421 AYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRM 480
            YTCMVDVLCKN MFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RM
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 481 QGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGML 540
           QGHGCLPNITTYNELLDALFR NKY EAFGLFQEIE  NLQPNLVTYNT+LYGFSRAGM+
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 541 GEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTI 600
           GEALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEWHPDIITYT 
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 601 LIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDILGK 660
           LIWGACNW+NIEEA+ +L KA+NQGICPNFATWN LV CFFDSLGHMGPIHILDDIL K
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659

[Close]
BLAST of CmaCh08G012930 vs. NCBI nr
Match: gi|659116911|ref|XP_008458325.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis melo])

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 569/659 (86.34%), Postives = 613/659 (93.02%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIINPREPNKQHLLQESDVLKQLKRERNLSSALQY 60
           MYLKEGCSLL+KIQKPL+PFVLNS+PIINPR+PNKQ LLQESDVLK+LK +RNLSSAL +
Sbjct: 1   MYLKEGCSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSALGF 60

Query: 61  FCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSIINSHK 120
           F A+ANSNAF+HTASTY++MIEKLGRECEMDVVQYILQQMKMDG+NCCEDLF+ IIN +K
Sbjct: 61  FTAIANSNAFQHTASTYRVMIEKLGRECEMDVVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 121 RAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLIPNVF 180
           R GSAEQALK+ YRIGEFGCKPTVKIYNHLLDALL+EN+FQMINPLY NMKK GLIPNVF
Sbjct: 121 RVGSAEQALKLFYRIGEFGCKPTVKIYNHLLDALLSENKFQMINPLYNNMKKGGLIPNVF 180

Query: 181 TYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDARELAGRF 240
           TYNILLKALCKN RVDAAHKLFVEMS+KGCPPDAV+YTTMVSSLCKAGKIDDARELAGRF
Sbjct: 181 TYNILLKALCKNGRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 241 KPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVESAFA 300
           KP+VPVYNALI G CKEGR+EVAIKLLGEMM+NGVDPNV+SYS IINSLC  GNVE AFA
Sbjct: 241 KPNVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSSIINSLCVFGNVELAFA 300

Query: 301 LLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLIHGLC 360
           LLAQMFSRGC ANI TFTPLI+GCFMRG+ YEAL+LWKLMI+DG EPNVVAYNTLIHGLC
Sbjct: 301 LLAQMFSRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIRDGCEPNVVAYNTLIHGLC 360

Query: 361 NSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCCPNVV 420
           +SGSL EALQV DQ++RSGC+ NV TYSILIDGFAK+GDLVGASETWNRMISHGC PNVV
Sbjct: 361 SSGSLEEALQVRDQMQRSGCVPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 421 AYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRM 480
           AYTCMVDVLCKN MFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RM
Sbjct: 421 AYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 481 QGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGML 540
           QGHGCLPNITTYNELLDALFR NKY EAFGLFQEIE+ NLQPNLVTYNTILYGFSRAGM+
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEERNLQPNLVTYNTILYGFSRAGMI 540

Query: 541 GEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTI 600
           GEALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEW PDIITYT 
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWQPDIITYTG 600

Query: 601 LIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDILGK 660
           LIWGAC WINIEEAI +L KA+NQGICPNFATWN L+ CFFDSLGHMGPIHILDDIL K
Sbjct: 601 LIWGACKWINIEEAIAFLDKAINQGICPNFATWNALIRCFFDSLGHMGPIHILDDILRK 659

[Close]
BLAST of CmaCh08G012930 vs. NCBI nr
Match: gi|694393292|ref|XP_009372091.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Pyrus x bretschneideri])

HSP 1 Score: 925.6 bits (2391), Expect = 5.5e-266
Identity = 431/667 (64.62%), Postives = 549/667 (82.31%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSS-PII--NPR---EPNK-QHLLQESDVLKQLKRERN 60
           MYLKEG SLLLK+ KP +PFVLN++ PI+  NP+   EPN+ Q  L+ESDVL++LK E +
Sbjct: 1   MYLKEGRSLLLKVHKPSVPFVLNTTNPILSSNPKPQIEPNQDQPFLKESDVLQRLKSEHH 60

Query: 61  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFV 120
           L SAL+YF ++ANS AF+HT  TY  MIEKLGR+CEMD VQY+L QMK++GV C E+LF+
Sbjct: 61  LGSALEYFRSIANSRAFEHTPLTYHAMIEKLGRQCEMDGVQYLLNQMKLEGVGCSEELFI 120

Query: 121 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKD 180
           S+I+S++RAG AEQALKM YRI E GCK TVKIYNHLLDALL+ENRFQMINP+Y NMKKD
Sbjct: 121 SVISSYRRAGLAEQALKMFYRIRELGCKSTVKIYNHLLDALLSENRFQMINPIYSNMKKD 180

Query: 181 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 240
           G+ PNV+TYNILLKALCKNDRVD AHKL VEMS KGCPPDAVSYTT+VS+LC+ GK+++A
Sbjct: 181 GMEPNVYTYNILLKALCKNDRVDGAHKLLVEMSKKGCPPDAVSYTTVVSALCRLGKVEEA 240

Query: 241 RELAGRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESG 300
           RELAGRF+P VP YNAL++G CKE ++E A+KLL EM++ G++PNVI+YS IINSL ++ 
Sbjct: 241 RELAGRFEPIVPAYNALVNGVCKENKIEEALKLLVEMVDKGINPNVITYSTIINSLSDTR 300

Query: 301 NVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYN 360
           NVESA A+LAQMF RGCS N+ TFT LI+G F+ GR +EAL+LWK MI +G++PN++AY 
Sbjct: 301 NVESALAVLAQMFVRGCSPNVHTFTSLIKGYFVEGRVHEALDLWKQMILEGFKPNIIAYT 360

Query: 361 TLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISH 420
           TL+HGLC +G + +A+ VC +++++GC  NV TYS LIDGFAK GDLVGASETWN M++ 
Sbjct: 361 TLVHGLCTNGKMGDAVSVCHEMDKNGCPPNVTTYSTLIDGFAKVGDLVGASETWNNMMNR 420

Query: 421 GCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWA 480
           G  PNV+AYTCMVDVLC+N+MF QA+S++E M  EGC PNTVTFNTFIKGLC +G+V+WA
Sbjct: 421 GYRPNVIAYTCMVDVLCRNFMFHQAHSLVENMAAEGCPPNTVTFNTFIKGLCADGKVDWA 480

Query: 481 MKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYG 540
           + +LD+M+ +GC PNITTYNELLD LF+ N++ EA+G+ +E+E+  +  NLVTYNTIL G
Sbjct: 481 VNMLDKMEKNGCFPNITTYNELLDGLFKANRFEEAYGIVREMEERGMIMNLVTYNTILNG 540

Query: 541 FSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHP 600
           F  AGM  EA+QL  K+LV GT PDAITYNT+I+A CK+G + TA+QL +R+   KEW P
Sbjct: 541 FCHAGMTKEAMQLLGKMLVRGTKPDAITYNTIIYANCKEGTISTAIQLFDRIGAEKEWQP 600

Query: 601 DIITYTILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHIL 660
           D++ YT L+WG CNW+ ++EA+ YL+K +++GICPN  TWN LV CFF SLGH+GPI++L
Sbjct: 601 DVVAYTSLVWGICNWVGLDEAMIYLNKMVSEGICPNTGTWNALVRCFFSSLGHLGPIYML 660

[Close]
BLAST of CmaCh08G012930 vs. NCBI nr
Match: gi|645233585|ref|XP_008223416.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Prunus mume])

HSP 1 Score: 921.4 bits (2380), Expect = 1.0e-264
Identity = 429/661 (64.90%), Postives = 538/661 (81.39%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSSPIIN----PREPNKQHLLQESDVLKQLKRERNLSS 60
           MYLKEGCSLLLK+ KP  PFVLN++PI+N    P+    Q  L+E DVL++L+ E +++S
Sbjct: 1   MYLKEGCSLLLKVHKPSRPFVLNTNPILNSNPKPQMEPSQAFLEEYDVLQRLRHEHHIAS 60

Query: 61  ALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFVSII 120
           AL+YF +++NS AFKHT  TY+ MI KLG +CEMD VQY+L QMK++G+ C E+LF+S+I
Sbjct: 61  ALEYFRSISNSRAFKHTPLTYEAMIVKLGSQCEMDGVQYLLNQMKLEGLGCSEELFISVI 120

Query: 121 NSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKDGLI 180
           NS++RAG AEQALKM YRI EFGCKPTVKIYNHLLDALL+ENRFQMINP+Y NMKKDG+ 
Sbjct: 121 NSYRRAGLAEQALKMFYRIREFGCKPTVKIYNHLLDALLSENRFQMINPIYSNMKKDGME 180

Query: 181 PNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDAREL 240
           PNV+TYNILLKALCKNDRVD AHKL VEMS KGC PDAVSYTT+VS+LC+ GK+++AREL
Sbjct: 181 PNVYTYNILLKALCKNDRVDGAHKLLVEMSKKGCSPDAVSYTTVVSALCRVGKVEEAREL 240

Query: 241 AGRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESGNVE 300
           A RF P VPVYNA+I+G CKE ++E A++LL EM++ G+DPNVI+YS IIN L +  NVE
Sbjct: 241 AVRFDPIVPVYNAVINGVCKECKIEEALELLVEMVDKGIDPNVITYSTIINYLSDMRNVE 300

Query: 301 SAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYNTLI 360
           SA ALLAQMF RGCS NI TFT LI+G F+ GR +EAL LWK +I++G+ PN++AY +L+
Sbjct: 301 SALALLAQMFVRGCSPNIHTFTSLIKGYFLEGRVHEALGLWKRIIREGFVPNIIAYTSLM 360

Query: 361 HGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISHGCC 420
           HGLC++G + +A+ V  ++ER+GC  NV TY  LIDGFAKAG+LVGASETWN M++HGC 
Sbjct: 361 HGLCSNGKMGDAVSVLHEMERNGCPPNVTTYGTLIDGFAKAGNLVGASETWNNMMNHGCR 420

Query: 421 PNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKV 480
           PNV+AYTCMVDVLC+N+MF QA  ++E MT EGC PN VTFNTFIKGLC +G+V+WA+K+
Sbjct: 421 PNVIAYTCMVDVLCRNYMFHQAQCLVENMTAEGCPPNAVTFNTFIKGLCGDGKVDWAVKM 480

Query: 481 LDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYGFSR 540
           LD+M+ HGC PNITTYNELLD LF+ N++ EAFGL +EI++  ++ NLVTYNTIL GF +
Sbjct: 481 LDKMEKHGCFPNITTYNELLDGLFKVNRFEEAFGLVKEIQERGMELNLVTYNTILNGFCQ 540

Query: 541 AGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDII 600
           AGM  + +QLF K+LVGGT PDAITYN +I+AYCKQG++ TA Q+   +   KEW PD+I
Sbjct: 541 AGMTMDGMQLFGKMLVGGTKPDAITYNIIIYAYCKQGRISTATQIFNSIGAAKEWQPDVI 600

Query: 601 TYTILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHILDDI 658
            YT L+ G CN I ++EA+ YLHK + +GICPN  TWNVLV CFF SLG + PI+ILDDI
Sbjct: 601 AYTSLLSGICNLIGLDEAMVYLHKMIREGICPNIGTWNVLVRCFFSSLGQLEPIYILDDI 660

[Close]
BLAST of CmaCh08G012930 vs. NCBI nr
Match: gi|657996104|ref|XP_008390413.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Malus domestica])

HSP 1 Score: 917.5 bits (2370), Expect = 1.5e-263
Identity = 426/667 (63.87%), Postives = 545/667 (81.71%), Query Frame = 1 

Query: 1   MYLKEGCSLLLKIQKPLMPFVLNSS-PII--NPR---EPNK-QHLLQESDVLKQLKRERN 60
           MYLKEG SLLLK+ KP +PFVLN++ PI+  NP+   EPN+ Q  L+ESDVL++LK E +
Sbjct: 1   MYLKEGRSLLLKVHKPSVPFVLNTTNPILGSNPKPQIEPNQDQPFLKESDVLQRLKSEHH 60

Query: 61  LSSALQYFCAVANSNAFKHTASTYKLMIEKLGRECEMDVVQYILQQMKMDGVNCCEDLFV 120
           L SAL+YF ++ANS AF+HT  TY  MIEKLGR+CEMD VQY+L QMK++GV C E+LF+
Sbjct: 61  LGSALEYFRSIANSRAFEHTPLTYHAMIEKLGRQCEMDGVQYLLNQMKLEGVGCSEELFI 120

Query: 121 SIINSHKRAGSAEQALKMLYRIGEFGCKPTVKIYNHLLDALLTENRFQMINPLYINMKKD 180
            +I+S++RAG AEQALKM YRI EFGCK TVKIYNHLLDALL+ENRFQMINP+Y NMKKD
Sbjct: 121 CVISSYRRAGLAEQALKMFYRIREFGCKSTVKIYNHLLDALLSENRFQMINPIYSNMKKD 180

Query: 181 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSSKGCPPDAVSYTTMVSSLCKAGKIDDA 240
           G+ PNV+TYNILLKALCKNDRVD AHKL VEMS KGC PDAVSYTT+VS+LC+ GK+++A
Sbjct: 181 GMEPNVYTYNILLKALCKNDRVDGAHKLLVEMSKKGCLPDAVSYTTVVSALCRLGKVEEA 240

Query: 241 RELAGRFKPSVPVYNALIHGTCKEGRVEVAIKLLGEMMENGVDPNVISYSCIINSLCESG 300
           RELAGRF+P VPVYNAL++G CKE ++E A+KLL EM++ G++PNVI+YS IINSL ++ 
Sbjct: 241 RELAGRFEPIVPVYNALVNGVCKENKIEAALKLLVEMVDKGINPNVITYSTIINSLSDTR 300

Query: 301 NVESAFALLAQMFSRGCSANIQTFTPLIRGCFMRGRFYEALELWKLMIKDGYEPNVVAYN 360
           NVESA A+LAQM  RGCS N+ TFT LI+G F+ GR +EAL+LW  MI + ++PN++AY 
Sbjct: 301 NVESALAVLAQMIVRGCSPNVHTFTSLIKGYFVEGRVHEALDLWNRMILEEFKPNIIAYT 360

Query: 361 TLIHGLCNSGSLVEALQVCDQLERSGCLSNVITYSILIDGFAKAGDLVGASETWNRMISH 420
           TL+HGLC +G + +A+ VC +++++GC  NV TYS LIDGFAK GDLVGAS+TWN M++ 
Sbjct: 361 TLVHGLCTNGKMGDAVSVCHEMDKNGCPPNVTTYSTLIDGFAKVGDLVGASDTWNNMMNR 420

Query: 421 GCCPNVVAYTCMVDVLCKNWMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWA 480
           GC PNV+AYTCM DVLC+N+MF QA S++E M  EGC PNTVTFNTFIKGLC +G+V+WA
Sbjct: 421 GCRPNVIAYTCMXDVLCRNFMFHQAXSLVENMAAEGCXPNTVTFNTFIKGLCADGKVDWA 480

Query: 481 MKVLDRMQGHGCLPNITTYNELLDALFRTNKYAEAFGLFQEIEKGNLQPNLVTYNTILYG 540
           + +LD+M+ +GCLPNITTYNELLD LF+ N++ EA+G+ +EIE+  +  NLVTYNTIL G
Sbjct: 481 VNMLDKMEKNGCLPNITTYNELLDGLFKXNRFEEAYGIVREIEERGMXMNLVTYNTILNG 540

Query: 541 FSRAGMLGEALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHP 600
           F   GM  EA+QL  K+LV GT PDAITYNT+I+A CK+G + TA+QL +R+   K+W P
Sbjct: 541 FCHXGMTKEAMQLLGKMLVRGTKPDAITYNTIIYANCKEGTISTAIQLFDRIGAEKZWRP 600

Query: 601 DIITYTILIWGACNWINIEEAITYLHKAMNQGICPNFATWNVLVWCFFDSLGHMGPIHIL 660
           D++ YT L+WG CNW+ ++EA+ YL+K +++GICPN  TWN LV CFF SLGH+GPI++L
Sbjct: 601 DVVAYTSLVWGICNWVGLDEAMIYLNKMVSEGICPNTGTWNXLVRCFFSSLGHLGPIYML 660

The following BLAST results are available for this feature:
BLAST of CmaCh08G012930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP270_ARATH9.6e-20252.64Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN... [more]
PP444_ARATH3.0e-9431.38Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
PP281_ARATH4.9e-8130.50Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PP120_ARATH5.4e-8027.81Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
PPR99_ARATH9.6e-7731.24Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
BLAST of CmaCh08G012930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCK1_CUCSA0.0e+0086.19Uncharacterized protein OS=Cucumis sativus GN=Csa_6G324890 PE=4 SV=1[more]
V4S1G4_9ROSI5.8e-25464.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004501mg PE=4 SV=1[more]
A0A067JVP2_JATCU1.6e-25162.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19037 PE=4 SV=1[more]
F6H707_VITVI8.9e-24763.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00600 PE=4 SV=... [more]
B9HX52_POPTR6.4e-24562.22Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
BLAST of CmaCh08G012930 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48810.15.4e-20352.64 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G64320.11.7e-9531.38 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53700.12.8e-8230.50 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74580.13.1e-8127.81 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63130.15.4e-7831.24 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmaCh08G012930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462136|ref|XP_004148797.1|0.0e+0086.19PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis sativu... [more]
gi|659116911|ref|XP_008458325.1|0.0e+0086.34PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis melo][more]
gi|694393292|ref|XP_009372091.1|5.5e-26664.62PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Pyrus x bretsc... [more]
gi|645233585|ref|XP_008223416.1|1.0e-26464.90PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Prunus mume][more]
gi|657996104|ref|XP_008390413.1|1.5e-26363.87PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Malus domestic... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G012930.1CmaCh08G012930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 316..344
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 448..481
score: 1.9E-15coord: 414..446
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 557..607
score: 4.6E-13coord: 347..396
score: 3.1E-16coord: 177..226
score: 1.1E-18coord: 487..535
score: 1.1E-12coord: 242..290
score: 7.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 96..153
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 596..629
score: 9.0E-4coord: 420..454
score: 4.8E-5coord: 215..236
score: 8.5E-5coord: 491..523
score: 2.1E-4coord: 525..558
score: 3.6E-6coord: 455..489
score: 5.0E-11coord: 246..279
score: 1.9E-9coord: 350..383
score: 1.3E-7coord: 385..419
score: 1.8E-9coord: 316..349
score: 5.3E-8coord: 280..313
score: 8.4E-8coord: 560..588
score: 4.8E-7coord: 180..214
score: 2.0
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 453..487
score: 13.406coord: 243..277
score: 12.627coord: 594..628
score: 8.495coord: 278..312
score: 11.323coord: 348..382
score: 11.63coord: 73..107
score: 7.278coord: 108..142
score: 8.111coord: 178..212
score: 13.943coord: 418..452
score: 10.797coord: 313..347
score: 11.52coord: 523..557
score: 11.17coord: 488..522
score: 10.874coord: 558..588
score: 10.885coord: 383..417
score: 11.97coord: 213..241
score: 7.772coord: 143..177
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 324..435
score: 1.9E-10coord: 491..631
score: 1.9
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 496..623
score: 6.45E-7coord: 143..247
score: 6.45E-7coord: 279..354
score: 6.4
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 114..670
score: 5.2E
NoneNo IPR availablePANTHERPTHR24015:SF269SUBFAMILY NOT NAMEDcoord: 114..670
score: 5.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G012930Cucsa.246990Cucumber (Gy14) v1cgycmaB0689
CmaCh08G012930Cla009230Watermelon (97103) v1cmawmB878
CmaCh08G012930Csa6G324890Cucumber (Chinese Long) v2cmacuB909
CmaCh08G012930MELO3C021257Melon (DHL92) v3.5.1cmameB816
CmaCh08G012930ClCG06G004440Watermelon (Charleston Gray)cmawcgB804
CmaCh08G012930CSPI06G17670Wild cucumber (PI 183967)cmacpiB929
CmaCh08G012930CmoCh08G012570Cucurbita moschata (Rifu)cmacmoB912
CmaCh08G012930Cp4.1LG17g00090Cucurbita pepo (Zucchini)cmacpeB915
CmaCh08G012930MELO3C021257.2Melon (DHL92) v3.6.1cmamedB914
CmaCh08G012930CsaV3_6G028460Cucumber (Chinese Long) v3cmacucB1078
CmaCh08G012930Cla97C06G113870Watermelon (97103) v2cmawmbB921
CmaCh08G012930Bhi12G001743Wax gourdcmawgoB1091
CmaCh08G012930CsGy6G017240Cucumber (Gy14) v2cgybcmaB877
CmaCh08G012930Carg18900Silver-seed gourdcarcmaB0988
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G012930Cucumber (Gy14) v1cgycmaB0731
CmaCh08G012930Cucurbita moschata (Rifu)cmacmoB883
CmaCh08G012930Cucurbita moschata (Rifu)cmacmoB887
CmaCh08G012930Wild cucumber (PI 183967)cmacpiB903
CmaCh08G012930Cucumber (Chinese Long) v2cmacuB885
CmaCh08G012930Melon (DHL92) v3.5.1cmameB850
CmaCh08G012930Watermelon (Charleston Gray)cmawcgB796
CmaCh08G012930Watermelon (97103) v1cmawmB869
CmaCh08G012930Cucurbita pepo (Zucchini)cmacpeB895
CmaCh08G012930Cucurbita pepo (Zucchini)cmacpeB928
CmaCh08G012930Cucurbita pepo (Zucchini)cmacpeB931
CmaCh08G012930Bottle gourd (USVL1VR-Ls)cmalsiB811
CmaCh08G012930Bottle gourd (USVL1VR-Ls)cmalsiB832
CmaCh08G012930Cucumber (Gy14) v2cgybcmaB454
CmaCh08G012930Melon (DHL92) v3.6.1cmamedB950
CmaCh08G012930Silver-seed gourdcarcmaB0096
CmaCh08G012930Cucumber (Chinese Long) v3cmacucB1049
CmaCh08G012930Watermelon (97103) v2cmawmbB911
CmaCh08G012930Watermelon (97103) v2cmawmbB914
CmaCh08G012930Wax gourdcmawgoB1089
CmaCh08G012930Wax gourdcmawgoB1107
CmaCh08G012930Cucurbita maxima (Rimu)cmacmaB298
CmaCh08G012930Cucurbita maxima (Rimu)cmacmaB373
CmaCh08G012930Cucurbita maxima (Rimu)cmacmaB554