Cp4.1LG17g00040 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g00040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionWRKY
LocationCp4.1LG17 : 448267 .. 448782 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAGACCGAAATGGATCATCTGGACGACGGTTACAGGTGGCGGAAGTACGGTCAGAAAGCCGTTAAAAACAGCCCTTACCCAAGAAGCTATTACCGCTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCCATGACCCTTCCGTCGTCGTCACCACTTACGAAGGTCAACACAATCATCAAAGCCCCATCTTGCCACGTGGATCCCTCTCAGCATCAATTTCCACCTCCGCCGCCCTCCATCCACCGCCCCTTCTTTTCCAACACCAACAATACACCTACACCTACACTCCGCCAACGCCACCGCCGCCGCCTATGGAGCTTGTCACGTGCGGAGGATTCGAACCGATGTTCCAGTGTTTCGGAGAAGAACGGCGTCGTATTGGTGGATCCTCTCCTAGTTCTGCTTCGTTCAAAGACCATGGGCTTCTGCAAGATATGATCGTACCCTCCTCCTCCTCCTCCTCCTCCTCCGTACACATCCCCAAAGAAGAGTAA

mRNA sequence

ATGACCAAGACCGAAATGGATCATCTGGACGACGGTTACAGGTGGCGGAAGTACGGTCAGAAAGCCGTTAAAAACAGCCCTTACCCAAGAAGCTATTACCGCTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCCATGACCCTTCCGTCGTCGTCACCACTTACGAAGGTCAACACAATCATCAAAGCCCCATCTTGCCACGTGGATCCCTCTCAGCATCAATTTCCACCTCCGCCGCCCTCCATCCACCGCCCCTTCTTTTCCAACACCAACAATACACCTACACCTACACTCCGCCAACGCCACCGCCGCCGCCTATGGAGCTTGTCACGTGCGGAGGATTCGAACCGATGTTCCAGTGTTTCGGAGAAGAACGGCGTCGTATTGGTGGATCCTCTCCTAGTTCTGCTTCGTTCAAAGACCATGGGCTTCTGCAAGATATGATCGTACCCTCCTCCTCCTCCTCCTCCTCCTCCGTACACATCCCCAAAGAAGAGTAA

Coding sequence (CDS)

ATGACCAAGACCGAAATGGATCATCTGGACGACGGTTACAGGTGGCGGAAGTACGGTCAGAAAGCCGTTAAAAACAGCCCTTACCCAAGAAGCTATTACCGCTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCCATGACCCTTCCGTCGTCGTCACCACTTACGAAGGTCAACACAATCATCAAAGCCCCATCTTGCCACGTGGATCCCTCTCAGCATCAATTTCCACCTCCGCCGCCCTCCATCCACCGCCCCTTCTTTTCCAACACCAACAATACACCTACACCTACACTCCGCCAACGCCACCGCCGCCGCCTATGGAGCTTGTCACGTGCGGAGGATTCGAACCGATGTTCCAGTGTTTCGGAGAAGAACGGCGTCGTATTGGTGGATCCTCTCCTAGTTCTGCTTCGTTCAAAGACCATGGGCTTCTGCAAGATATGATCGTACCCTCCTCCTCCTCCTCCTCCTCCTCCGTACACATCCCCAAAGAAGAGTAA

Protein sequence

MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSASISTSAALHPPPLLFQHQQYTYTYTPPTPPPPPMELVTCGGFEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPSSSSSSSSVHIPKEE
Homology
[Close]
BLAST of Cp4.1LG17g00040 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 89/180 (49.44%), Postives = 108/180 (60.00%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           +TK+++D+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCGVKKRVERSS DPS+V+TTY
Sbjct: 212 LTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTY 271

Query: 61  EGQHNH-------------QSPILPRGSLSASISTSAALHPPPLLFQHQQ----YTYTYT 120
           EGQH H              SPIL  G+ +AS S+ +   P  LL QH Q    Y     
Sbjct: 272 EGQHTHPFPMTPRGHIGMLTSPILDHGATTASSSSFSIPQPRYLLTQHHQPYNMYNNNSL 331

Query: 121 PPTPPPPPMELVTCGGFEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPSSSSSSS 164
                          G    F  FG +  +   S+ +S+S +DHGLLQD I+PS   S +
Sbjct: 332 SMINRRSSDGTFVNPGPSSSFPGFGYDMSQ--ASTSTSSSIRDHGLLQD-ILPSQIRSDT 388

[Close]
BLAST of Cp4.1LG17g00040 vs. Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-31
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DP+VV+TTY
Sbjct: 163 MTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPTVVITTY 222

Query: 61  EGQHNHQSPILPRGSLSASISTSAALHPPPLLFQHQQYTYTYT 104
           EGQHNH  P   RGS +A+   SA L  P         T  YT
Sbjct: 223 EGQHNHPIPTNLRGSSAAAAMFSADLMTPRSFAHDMFRTAAYT 265

[Close]
BLAST of Cp4.1LG17g00040 vs. Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.8e-31
Identity = 88/194 (45.36%), Postives = 101/194 (52.06%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHL+DGYRWRKYGQKAVKNSP+PRSYYRCTTA C VKKRVERS  DPS VVTTY
Sbjct: 165 MTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPSTVVTTY 224

Query: 61  EGQHNHQSPILPR--------GSLSASISTSAALHPPPL--------------LFQHQQY 120
           EGQH H SP+  R        GS  A+ S        P+               + HQQ 
Sbjct: 225 EGQHTHISPLTSRPISTGGFFGSSGAASSLGNGCFGFPIDGSTLISPQFQQLVQYHHQQ- 284

Query: 121 TYTYTPPTPPPPPMELVTC-GGFEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 172
                         EL++C GG          E         S    KD+GLLQD +VPS
Sbjct: 285 -----------QQQELMSCFGGVNEYLNSHANEYGDDNRVKKSRVLVKDNGLLQD-VVPS 337

[Close]
BLAST of Cp4.1LG17g00040 vs. Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-29
Identity = 59/83 (71.08%), Postives = 67/83 (80.72%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTKTE+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DP+VV+TTY
Sbjct: 174 MTKTEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTY 233

Query: 61  EGQHNHQSPILPRGSLSASISTS 84
           E QHNH  P   R ++ +  + S
Sbjct: 234 ESQHNHPIPTNRRTAMFSGTTAS 256

[Close]
BLAST of Cp4.1LG17g00040 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.3e-29
Identity = 78/164 (47.56%), Postives = 95/164 (57.93%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DPS+V+TTY
Sbjct: 127 MTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTY 186

Query: 61  EGQHNHQSPILPRGSLSASISTSAALHPPPLLFQHQQYTYTYTPPTPPPPPMELVTCGGF 120
           EG+HNH  P   RG+++A            LL    ++   +      P   + V    +
Sbjct: 187 EGKHNHPIPSTLRGTVAAEHLLVHRGGGGSLLHSFPRHHQDFLMMKHSPANYQSVGSLSY 246

Query: 121 EPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPSSSSSSSS 165
           E      G        + P      D+GLLQD IVPS  S + S
Sbjct: 247 E---HGHGTSSYNFNNNQP----VVDYGLLQD-IVPSMFSKNES 282

[Close]
BLAST of Cp4.1LG17g00040 vs. TrEMBL
Match: A0A0A0KD61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G327430 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 110/173 (63.58%), Postives = 127/173 (73.41%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DPS+VVTTY
Sbjct: 154 MTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSIVVTTY 213

Query: 61  EGQHNHQSPILPRGSLSASISTSAALHPPPLLFQHQQYTYTYTPPTPPPPPMELVTC-GG 120
           EGQH HQSPI+PRG+LS++  T +    PPL+F   Q  Y       P PP ++VTC GG
Sbjct: 214 EGQHTHQSPIMPRGALSSTAFTPSPQQQPPLVFSQPQQLYRNQFTYAPAPPADVVTCGGG 273

Query: 121 FEPMFQCFGEERRRIGG------SSPSSASFKDHGLLQDMIVPSSSSSSSSVH 167
           F  +F  FGEERR I G      S+ ++ SF+DHGLLQDMIVP        V+
Sbjct: 274 FGHVFHSFGEERRLIDGRTTTTTSTTTTDSFQDHGLLQDMIVPFPEEKEKKVN 326

[Close]
BLAST of Cp4.1LG17g00040 vs. TrEMBL
Match: A0A061EQ42_THECC (WRKY DNA-binding protein 48, putative isoform 1 OS=Theobroma cacao GN=TCM_021400 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-41
Identity = 99/165 (60.00%), Postives = 112/165 (67.88%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYYRCT+AGCGVKKRVERSS DP+VVVTTY
Sbjct: 192 MTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERSSDDPTVVVTTY 251

Query: 61  EGQHNHQSPILPRGSLSASISTS-------AALHPPPLLFQHQQYTYTYTPPTPPPPPME 120
           EGQH H  PI PRGS+  S  +S       A+   P   + HQQ  Y YT   P      
Sbjct: 252 EGQHTHPCPITPRGSIGISPDSSTFGAASAASFIVPQPQYLHQQQPYIYTSLPPLNITTA 311

Query: 121 LVTCGGF-EPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 158
             T   F  P F  F +ERR    + PS++S +DHGLLQD IVPS
Sbjct: 312 TATSSSFINPSFPAFLQERRV---APPSASSLRDHGLLQD-IVPS 352

[Close]
BLAST of Cp4.1LG17g00040 vs. TrEMBL
Match: A0A0D2SBY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G068100 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41
Identity = 93/166 (56.02%), Postives = 112/166 (67.47%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DP++VVTTY
Sbjct: 182 MTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPTIVVTTY 241

Query: 61  EGQHNHQSPILPRGSL-----SASISTSAALHPPPLLFQHQQYTYTYTPP--TPPPPPME 120
           EGQH H  PI+PRG++     SA+    + + P P+   HQQ       P      P + 
Sbjct: 242 EGQHTHPCPIMPRGAIGIAPDSAAFGAPSFIIPQPMYLNHQQQQQQQLQPYIYNSTPSLN 301

Query: 121 LVTCGG--FEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 158
           + T       P F  F +E+ R    +PS+ S +DHGLLQD IVPS
Sbjct: 302 ITTASSNIIHPPFPGFLQEKPRFSNPNPSALSHRDHGLLQD-IVPS 346

[Close]
BLAST of Cp4.1LG17g00040 vs. TrEMBL
Match: A0A068LC88_GOSHI (WRKY transcription factor 32 OS=Gossypium hirsutum GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.9e-41
Identity = 92/166 (55.42%), Postives = 112/166 (67.47%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DP++VVTTY
Sbjct: 173 MTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPTIVVTTY 232

Query: 61  EGQHNHQSPILPRGSL-----SASISTSAALHPPPLLFQHQQYTYTYTPP--TPPPPPME 120
           EGQH H  PI+PRG++     S++    + + P P+   HQQ       P      P + 
Sbjct: 233 EGQHTHPCPIMPRGAIGIAPDSSAFGAPSFIIPQPMYINHQQQQQQQLQPYIYNSTPSLN 292

Query: 121 LVTCGG--FEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 158
           + T       P F  F +E+ R    +PS+ S +DHGLLQD IVPS
Sbjct: 293 ITTASSNIIHPSFPGFLQEKPRFSNPNPSALSHRDHGLLQD-IVPS 337

[Close]
BLAST of Cp4.1LG17g00040 vs. TrEMBL
Match: A0A0A7E9J8_GOSAI (WRKY6 OS=Gossypium aridum PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.0e-41
Identity = 92/166 (55.42%), Postives = 112/166 (67.47%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DP++VVTTY
Sbjct: 183 MTKSDVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPTIVVTTY 242

Query: 61  EGQHNHQSPILPRGSL-----SASISTSAALHPPPLLFQHQQYTYTYTPP--TPPPPPME 120
           EGQH H  PI+PRG++     S++    + + P P+   HQQ       P      P + 
Sbjct: 243 EGQHTHPCPIMPRGAIGIAPDSSAFGAPSFIIPQPMYLNHQQQQQQQLQPYIYNSTPSLN 302

Query: 121 LVTCGG--FEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 158
           + T       P F  F +E+ R    +PS+ S +DHGLLQD IVPS
Sbjct: 303 ITTASSNIIHPPFPGFLQEKPRFSNPNPSALSHRDHGLLQD-IVPS 347

[Close]
BLAST of Cp4.1LG17g00040 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 144.4 bits (363), Expect = 6.3e-35
Identity = 89/180 (49.44%), Postives = 108/180 (60.00%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           +TK+++D+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCGVKKRVERSS DPS+V+TTY
Sbjct: 212 LTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTY 271

Query: 61  EGQHNH-------------QSPILPRGSLSASISTSAALHPPPLLFQHQQ----YTYTYT 120
           EGQH H              SPIL  G+ +AS S+ +   P  LL QH Q    Y     
Sbjct: 272 EGQHTHPFPMTPRGHIGMLTSPILDHGATTASSSSFSIPQPRYLLTQHHQPYNMYNNNSL 331

Query: 121 PPTPPPPPMELVTCGGFEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPSSSSSSS 164
                          G    F  FG +  +   S+ +S+S +DHGLLQD I+PS   S +
Sbjct: 332 SMINRRSSDGTFVNPGPSSSFPGFGYDMSQ--ASTSTSSSIRDHGLLQD-ILPSQIRSDT 388

[Close]
BLAST of Cp4.1LG17g00040 vs. TAIR10
Match: AT4G18170.1 (AT4G18170.1 WRKY DNA-binding protein 28)

HSP 1 Score: 137.5 bits (345), Expect = 7.7e-33
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DP+VV+TTY
Sbjct: 163 MTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPTVVITTY 222

Query: 61  EGQHNHQSPILPRGSLSASISTSAALHPPPLLFQHQQYTYTYT 104
           EGQHNH  P   RGS +A+   SA L  P         T  YT
Sbjct: 223 EGQHNHPIPTNLRGSSAAAAMFSADLMTPRSFAHDMFRTAAYT 265

[Close]
BLAST of Cp4.1LG17g00040 vs. TAIR10
Match: AT2G47260.1 (AT2G47260.1 WRKY DNA-binding protein 23)

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-32
Identity = 88/194 (45.36%), Postives = 101/194 (52.06%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHL+DGYRWRKYGQKAVKNSP+PRSYYRCTTA C VKKRVERS  DPS VVTTY
Sbjct: 165 MTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPSTVVTTY 224

Query: 61  EGQHNHQSPILPR--------GSLSASISTSAALHPPPL--------------LFQHQQY 120
           EGQH H SP+  R        GS  A+ S        P+               + HQQ 
Sbjct: 225 EGQHTHISPLTSRPISTGGFFGSSGAASSLGNGCFGFPIDGSTLISPQFQQLVQYHHQQ- 284

Query: 121 TYTYTPPTPPPPPMELVTC-GGFEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 172
                         EL++C GG          E         S    KD+GLLQD +VPS
Sbjct: 285 -----------QQQELMSCFGGVNEYLNSHANEYGDDNRVKKSRVLVKDNGLLQD-VVPS 337

[Close]
BLAST of Cp4.1LG17g00040 vs. TAIR10
Match: AT5G46350.1 (AT5G46350.1 WRKY DNA-binding protein 8)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-30
Identity = 59/83 (71.08%), Postives = 67/83 (80.72%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTKTE+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DP+VV+TTY
Sbjct: 174 MTKTEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTY 233

Query: 61  EGQHNHQSPILPRGSLSASISTS 84
           E QHNH  P   R ++ +  + S
Sbjct: 234 ESQHNHPIPTNRRTAMFSGTTAS 256

[Close]
BLAST of Cp4.1LG17g00040 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71)

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-30
Identity = 78/164 (47.56%), Postives = 95/164 (57.93%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DPS+V+TTY
Sbjct: 127 MTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTY 186

Query: 61  EGQHNHQSPILPRGSLSASISTSAALHPPPLLFQHQQYTYTYTPPTPPPPPMELVTCGGF 120
           EG+HNH  P   RG+++A            LL    ++   +      P   + V    +
Sbjct: 187 EGKHNHPIPSTLRGTVAAEHLLVHRGGGGSLLHSFPRHHQDFLMMKHSPANYQSVGSLSY 246

Query: 121 EPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPSSSSSSSS 165
           E      G        + P      D+GLLQD IVPS  S + S
Sbjct: 247 E---HGHGTSSYNFNNNQP----VVDYGLLQD-IVPSMFSKNES 282

[Close]
BLAST of Cp4.1LG17g00040 vs. NCBI nr
Match: gi|778714810|ref|XP_011657294.1| (PREDICTED: probable WRKY transcription factor 48 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-52
Identity = 110/173 (63.58%), Postives = 127/173 (73.41%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DPS+VVTTY
Sbjct: 154 MTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSIVVTTY 213

Query: 61  EGQHNHQSPILPRGSLSASISTSAALHPPPLLFQHQQYTYTYTPPTPPPPPMELVTC-GG 120
           EGQH HQSPI+PRG+LS++  T +    PPL+F   Q  Y       P PP ++VTC GG
Sbjct: 214 EGQHTHQSPIMPRGALSSTAFTPSPQQQPPLVFSQPQQLYRNQFTYAPAPPADVVTCGGG 273

Query: 121 FEPMFQCFGEERRRIGG------SSPSSASFKDHGLLQDMIVPSSSSSSSSVH 167
           F  +F  FGEERR I G      S+ ++ SF+DHGLLQDMIVP        V+
Sbjct: 274 FGHVFHSFGEERRLIDGRTTTTTSTTTTDSFQDHGLLQDMIVPFPEEKEKKVN 326

[Close]
BLAST of Cp4.1LG17g00040 vs. NCBI nr
Match: gi|659134196|ref|XP_008467077.1| (PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 48 [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 5.9e-51
Identity = 109/161 (67.70%), Postives = 126/161 (78.26%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DPS+VVTTY
Sbjct: 156 MTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSIVVTTY 215

Query: 61  EGQHNHQSPILPRGSLSASISTSAA---LHPPPLLFQHQ-QYTYTYTPPTPPPPPMELVT 120
           EGQH HQSPI+PRG+LS++  T++       PPL+F  Q Q  Y       P PP+++VT
Sbjct: 216 EGQHTHQSPIMPRGALSSTAYTASPQQHQQQPPLVFSSQPQQLYRNQFTYAPAPPVDVVT 275

Query: 121 C-GGFEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVP 157
           C GGF  +F  FGEERRRI   + +  SF+DHGLLQDMIVP
Sbjct: 276 CGGGFGHVFHSFGEERRRIDDRT-TPDSFQDHGLLQDMIVP 315

[Close]
BLAST of Cp4.1LG17g00040 vs. NCBI nr
Match: gi|590662053|ref|XP_007035842.1| (WRKY DNA-binding protein 48, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-41
Identity = 99/165 (60.00%), Postives = 112/165 (67.88%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYYRCT+AGCGVKKRVERSS DP+VVVTTY
Sbjct: 192 MTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERSSDDPTVVVTTY 251

Query: 61  EGQHNHQSPILPRGSLSASISTS-------AALHPPPLLFQHQQYTYTYTPPTPPPPPME 120
           EGQH H  PI PRGS+  S  +S       A+   P   + HQQ  Y YT   P      
Sbjct: 252 EGQHTHPCPITPRGSIGISPDSSTFGAASAASFIVPQPQYLHQQQPYIYTSLPPLNITTA 311

Query: 121 LVTCGGF-EPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 158
             T   F  P F  F +ERR    + PS++S +DHGLLQD IVPS
Sbjct: 312 TATSSSFINPSFPAFLQERRV---APPSASSLRDHGLLQD-IVPS 352

[Close]
BLAST of Cp4.1LG17g00040 vs. NCBI nr
Match: gi|823164550|ref|XP_012482217.1| (PREDICTED: probable WRKY transcription factor 48 [Gossypium raimondii])

HSP 1 Score: 176.8 bits (447), Expect = 3.2e-41
Identity = 93/166 (56.02%), Postives = 112/166 (67.47%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DP++VVTTY
Sbjct: 182 MTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPTIVVTTY 241

Query: 61  EGQHNHQSPILPRGSL-----SASISTSAALHPPPLLFQHQQYTYTYTPP--TPPPPPME 120
           EGQH H  PI+PRG++     SA+    + + P P+   HQQ       P      P + 
Sbjct: 242 EGQHTHPCPIMPRGAIGIAPDSAAFGAPSFIIPQPMYLNHQQQQQQQLQPYIYNSTPSLN 301

Query: 121 LVTCGG--FEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 158
           + T       P F  F +E+ R    +PS+ S +DHGLLQD IVPS
Sbjct: 302 ITTASSNIIHPPFPGFLQEKPRFSNPNPSALSHRDHGLLQD-IVPS 346

[Close]
BLAST of Cp4.1LG17g00040 vs. NCBI nr
Match: gi|662036270|gb|AIE43866.1| (WRKY transcription factor 32 [Gossypium hirsutum])

HSP 1 Score: 176.0 bits (445), Expect = 5.5e-41
Identity = 92/166 (55.42%), Postives = 112/166 (67.47%), Query Frame = 1 

Query: 1   MTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTY 60
           MTK+++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS DP++VVTTY
Sbjct: 173 MTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPTIVVTTY 232

Query: 61  EGQHNHQSPILPRGSL-----SASISTSAALHPPPLLFQHQQYTYTYTPP--TPPPPPME 120
           EGQH H  PI+PRG++     S++    + + P P+   HQQ       P      P + 
Sbjct: 233 EGQHTHPCPIMPRGAIGIAPDSSAFGAPSFIIPQPMYINHQQQQQQQLQPYIYNSTPSLN 292

Query: 121 LVTCGG--FEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIVPS 158
           + T       P F  F +E+ R    +PS+ S +DHGLLQD IVPS
Sbjct: 293 ITTASSNIIHPSFPGFLQEKPRFSNPNPSALSHRDHGLLQD-IVPS 337

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g00040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK48_ARATH1.1e-3349.44Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=... [more]
WRK28_ARATH1.4e-3166.02Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=... [more]
WRK23_ARATH6.8e-3145.36Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=... [more]
WRKY8_ARATH2.8e-2971.08Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=1 SV=1[more]
WRK71_ARATH6.3e-2947.56Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=... [more]
BLAST of Cp4.1LG17g00040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD61_CUCSA1.3e-5263.58Uncharacterized protein OS=Cucumis sativus GN=Csa_6G327430 PE=4 SV=1[more]
A0A061EQ42_THECC1.7e-4160.00WRKY DNA-binding protein 48, putative isoform 1 OS=Theobroma cacao GN=TCM_021400... [more]
A0A0D2SBY1_GOSRA2.3e-4156.02Uncharacterized protein OS=Gossypium raimondii GN=B456_005G068100 PE=4 SV=1[more]
A0A068LC88_GOSHI3.9e-4155.42WRKY transcription factor 32 OS=Gossypium hirsutum GN=WRKY32 PE=2 SV=1[more]
A0A0A7E9J8_GOSAI5.0e-4155.42WRKY6 OS=Gossypium aridum PE=2 SV=1[more]
BLAST of Cp4.1LG17g00040 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49520.16.3e-3549.44 WRKY DNA-binding protein 48[more]
AT4G18170.17.7e-3366.02 WRKY DNA-binding protein 28[more]
AT2G47260.13.8e-3245.36 WRKY DNA-binding protein 23[more]
AT5G46350.11.6e-3071.08 WRKY DNA-binding protein 8[more]
AT1G29860.13.6e-3047.56 WRKY DNA-binding protein 71[more]
BLAST of Cp4.1LG17g00040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778714810|ref|XP_011657294.1|1.8e-5263.58PREDICTED: probable WRKY transcription factor 48 [Cucumis sativus][more]
gi|659134196|ref|XP_008467077.1|5.9e-5167.70PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 48 [Cucumis m... [more]
gi|590662053|ref|XP_007035842.1|2.5e-4160.00WRKY DNA-binding protein 48, putative isoform 1 [Theobroma cacao][more]
gi|823164550|ref|XP_012482217.1|3.2e-4156.02PREDICTED: probable WRKY transcription factor 48 [Gossypium raimondii][more]
gi|662036270|gb|AIE43866.1|5.5e-4155.42WRKY transcription factor 32 [Gossypium hirsutum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006952 defense response
biological_process GO:0051179 localization
biological_process GO:0044699 single-organism process
biological_process GO:0050896 response to stimulus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010200 response to chitin
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g00040.1Cp4.1LG17g00040.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g00040Cucsa.247040Cucumber (Gy14) v1cgycpeB0656
Cp4.1LG17g00040Cucsa.252440Cucumber (Gy14) v1cgycpeB0678
Cp4.1LG17g00040CmaCh17G003790Cucurbita maxima (Rimu)cmacpeB377
Cp4.1LG17g00040CmaCh08G012890Cucurbita maxima (Rimu)cmacpeB915
Cp4.1LG17g00040CmaCh14G015810Cucurbita maxima (Rimu)cmacpeB270
Cp4.1LG17g00040CmoCh14G016120Cucurbita moschata (Rifu)cmocpeB233
Cp4.1LG17g00040CmoCh08G012540Cucurbita moschata (Rifu)cmocpeB852
Cp4.1LG17g00040CmoCh17G003670Cucurbita moschata (Rifu)cmocpeB340
Cp4.1LG17g00040Cla021806Watermelon (97103) v1cpewmB329
Cp4.1LG17g00040Cla009235Watermelon (97103) v1cpewmB340
Cp4.1LG17g00040Csa3G168410Cucumber (Chinese Long) v2cpecuB307
Cp4.1LG17g00040MELO3C006725Melon (DHL92) v3.5.1cpemeB314
Cp4.1LG17g00040ClCG05G006660Watermelon (Charleston Gray)cpewcgB291
Cp4.1LG17g00040CSPI03G15090Wild cucumber (PI 183967)cpecpiB307
Cp4.1LG17g00040MELO3C006725.2Melon (DHL92) v3.6.1cpemedB368
Cp4.1LG17g00040MELO3C015910.2Melon (DHL92) v3.6.1cpemedB350
Cp4.1LG17g00040CsaV3_3G015290Cucumber (Chinese Long) v3cpecucB0379
Cp4.1LG17g00040CsaV3_6G028510Cucumber (Chinese Long) v3cpecucB0409
Cp4.1LG17g00040Bhi01G000791Wax gourdcpewgoB0398
Cp4.1LG17g00040CsGy6G017300Cucumber (Gy14) v2cgybcpeB789
Cp4.1LG17g00040CsGy3G015240Cucumber (Gy14) v2cgybcpeB348
Cp4.1LG17g00040Carg18898Silver-seed gourdcarcpeB0985
Cp4.1LG17g00040Carg19612Silver-seed gourdcarcpeB0394
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g00040Cp4.1LG03g11900Cucurbita pepo (Zucchini)cpecpeB337
Cp4.1LG17g00040Cp4.1LG08g05270Cucurbita pepo (Zucchini)cpecpeB343
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g00040Wax gourdcpewgoB0379
Cp4.1LG17g00040Cucurbita pepo (Zucchini)cpecpeB158
Cp4.1LG17g00040Wild cucumber (PI 183967)cpecpiB330
Cp4.1LG17g00040Cucumber (Chinese Long) v2cpecuB329
Cp4.1LG17g00040Bottle gourd (USVL1VR-Ls)cpelsiB247
Cp4.1LG17g00040Watermelon (Charleston Gray)cpewcgB297
Cp4.1LG17g00040Melon (DHL92) v3.5.1cpemeB283
Cp4.1LG17g00040Melon (DHL92) v3.6.1cpemedB331
Cp4.1LG17g00040Silver-seed gourdcarcpeB0102