Carg18898 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18898
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WRKY transcription factor
Location	Cucurbita_argyrosperma_scaffold_162 : 329749 .. 333456 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCGTTTTTTCAACAATGTTGCTTCAGACGAGGACGACGCCGCCGGAGTTTCTTCCGGCGACCCAGAGGGGGTGGCCGAAACGGTTAGTCATTCCCAGTTTTCTTTATTTTCTCTACGGTTCCACTGCTGCGGAGTTCTGAAAATAAATAAATAAATAAATAAATAAATAAATAATAATAAATGTAAAGGAGTTTAAAACTTTTAACTGACCAAAAGACCAAAACGAACTAATAACTTTGTAAAGCATTTATGTCATTTTTGTTAGTTTAATTATAGGTTTCATAATTAAAAAAAAGAAAAAAAAGATCAGTTAACTTATATTTTGGGAAGAATGAATATATGTTCTAAAGTAAAGATATTATAAAATGAGGTTTTATTAGTAAAAGGATAATGTCCTCTAAGTATTTTAAATATGTTAGGTAATAATTTGGCAACTACCCTGGTTTAAAAAGAAATATTAAATGGTCTCATTACAAACACGTGGTTAAAACAATCATGCTAACGAAGAAAATGTGCATGATTAATTAAAATAAACTATATTTTTTTAATAAAAAAAAGCTTTTCAAAAAACATCTTTCAAATCATATCTTATTGATGAAAAGATAACACCTCAAACCCATCGTCCACCTTACCAAAAAAAAAAAAAAAAAAACATCTACTAAGAAAATGTTTCTACTCCCTTATAAAAAAAAATGTTTTGTTCCGCTCTCCAACTAATTTGGGATCTCACAATCTACCCCGTTGGCGACCCAACGTTCTCGCTGACACACTACACAGCTCAAGTCTATTGCTAGTTAGATATTGTCTGCTTTAGTCCGTTACATATTGTAGCTAATCTCACGATTTTAAATCACATATTGGTAGAAAGAGGTTTTCGCACCCTCATAGAAAAAATGTTTCATTCACATCTACCTTCTGAATTCTCTGATCTCTAACCAAAACACTCTAATTAGCCTTAAAAACTGTACCAAAAGAAGACTAGACCAAAACATCTAGCTAAGTGAAACAAATTAGTGGACAAGTTGAACCGCTGAATTAGATTTGCAATTTTTTTCCCATATGAGATTGCTAGCTTAAGTGCAACCAATCGCATGAGCTTCAACTCTTGTGTGTAGATCTCCTTTAATGGCATTCGATAAAAGGTGGTGGTGATCACTTTCCACGAGTAACTATATATAACAGTGATAGAAGAACATATCAATTATGAAATCTCACATCAATTAGAGAGAGAAACGAAACCAATCTCTACTTAACAGACCTATTTTAAAATTATGAGACGGAGAGAAACCAACCAAATGAAATCGAACCCCATCTCTAAATCTTATCCAAAAAAAAAATCAAAAGGAAAGCCAAAAGAAGGATCCTTTGGATGCCTAATGGGTGTGTCAAAGGTTTTAGGAACCGACCTATTGGAGCATCACTTCTACAAGTGTGGTCCCCATTTCTTTAATGTCTATTTCAAACAACTCTTTCATTTTATTTTTACATTTAAATATTTGGTAAGGTCTAGGAATTAGGATGTGTTTTTGGCACAATTAAACATATATTAAATGAACCCATTATAGGCTCCCCACCTAAATAAATGCCAAAGTTATATGCACTTTTTTATTAGAAATCAAATTAAATTTAATAAAATATTTTCAACTTTGAACCAAACTATTTTATTTTTTATTTTAAAAAAAAAACATATTATTTTCTTTAAGCGAAGGGTATGAGATTTTTTTTAAAAAAAAAGTATTCTCTTATATTCTTTAAACTTCAAAAAAGCATGAAATAGTTGAGTCACACCAATTTTAGGAGTGGGGAAAATAATTAAAATAACTTTGTAAATACGTCACAAAAAGATTAAAAAAAAGAGAAAGTGATGGGAGAGAAAGGGAATGGAATAATAAAAGTATAAATAAATAAACATATTAAAATATTAATAACCTAAGTACTAAAATCTTAAACCGAATCAGTTTCTTTTGGGAAAGTGTAACGCTTTTTATACACTTTTATTGGTCAAAGGATAAATAAAAAAGTGTGTATATATATAGATATATAGATATAGAGAAGAGATAAGTAGGAAGATATTTTTATTTTATTTAAAACAAAATAAATACTTATAATTAATACCAAGTTTATCACAACTTTCATGAATTTTGAAACCTCCAGTCCCCGGTAAACGGTAAAAGGCATGCATTTAAAACATTTTTTTATTTATAAAAGAAAAATACAACTATTAATCCCTCCCAATAAATAGTTGAATTCCACAAATCTGCATATCATTTGAAAGCATCTACACACATAAAAATAAACATGACAAGTGATTCGTTCAACGTCTTATAATACAGCTTATATATATACATATATTTATACTATAGTTTCAGATCTTGTAATAGTAAAATATATTGAAGCACGTCATATTCCTTTCTCTTTTGTATTCAACTATATACTAAGTTAAATTAGTACATTTCATAGCTTTAAACAATGTAACAAAAAAAAAAAAAAAAAAAAGTTAGATGTGACTAGATAACGATGAGGTATTTATAAACTTAGCTACGGGCTAATTGGATCGAGAATCTGCGAGATTTAGAGGCTTGGAGGGCAAGCAACATGTTGTGGATGCCGACAATGGGTGTCCCTTAGCAGCTACCTAGCTGCTTTTTTAGTTGACTCATTTGCTTCGACCAAATCACTAATAATATATATATATATATATATATGAAAGATGAGATTCCTAGTTGCATGTTGGAGTTCCCAATGGACTCGTCTTCCTTTAAGCCCTCCACCTTGTTCGACTTATTTGATCTCTTCTCTGCAGCTACCACCCCTCCGCCCCGGCCGCCCTCCTCCTCCTCCTCCGACCGCCTTCTTAATATTCCTTCAACTCCTTATTCCTCCTCCCTCTCTTCCTCCTCCGATGCCGGCGACCTGGATCCTTTCAACCAACACAAGTAAGTCTTGTTAATCTTGTTGGATGAAGGTTACCCATCGACTAAATCATCATGAGTTTATAATCAAGGAATATTACTTCATTGATACGAGACATTTTGCAAAGCTACTAGCACTTATGCTCAAAGTGGATAATATCATGCCACATGGGGTGGAGTCTGGTTGTTCTTAATTTTTATTGATTTTTTTGTGATATTTGGTGGTTAGGTTGAAACCCAAAAACAAGAACAAAAAAAGGGCTACACAACCCAGATTTGCGTTCATGACCAAGACCGAAATGGATCATCTGGACGACGGTTACAGGTGGCGGAAGTACGGTCAGAAAGCCGTTAAAAACAGCCCTTACCCAAGAAGCTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCCACGACCCTTCCGTCGTCGTCACCACTTACGAAGGTCAACACAATCATCAAAGCCCCATCTTGCCACGTGGATCCCTCTCACCATCAATTTCCACCTCCGCCGCCCTCCATCCACCGCCCCTTCTTTTCCAACACCAACAATACACCTACACCTACACTCCGCCACCGCCGCCGCCTATGGAGCTTGTCACGTGCGGAGGATTCGAACCGATGTTCCATTGTTTTGGAGAAGAACGGCGTCGTATTGGTGGATCCTCTCCCAGTTCTGCTTCCTTCAAAGACCATGGGCTTCTGCAAGATATGATCGTACCCACCTCCTCCTCCTCCTCCTCCTTACACATCCCCAAAGAAGAGTAA

mRNA sequence

ATGTGGCGTTTTTTCAACAATGTTGCTTCAGACGAGGACGACGCCGCCGGAGTTTCTTCCGGCGACCCAGAGGGGGTGGCCGAAACGTTCCCAATGGACTCGTCTTCCTTTAAGCCCTCCACCTTGTTCGACTTATTTGATCTCTTCTCTGCAGCTACCACCCCTCCGCCCCGGCCGCCCTCCTCCTCCTCCTCCGACCGCCTTCTTAATATTCCTTCAACTCCTTATTCCTCCTCCCTCTCTTCCTCCTCCGATGCCGGCGACCTGGATCCTTTCAACCAACACAAGTTGAAACCCAAAAACAAGAACAAAAAAAGGGCTACACAACCCAGATTTGCGTTCATGACCAAGACCGAAATGGATCATCTGGACGACGGTTACAGGTGGCGGAAGTACGGTCAGAAAGCCGTTAAAAACAGCCCTTACCCAAGAAGCTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCCACGACCCTTCCGTCGTCGTCACCACTTACGAAGGTCAACACAATCATCAAAGCCCCATCTTGCCACGTGGATCCCTCTCACCATCAATTTCCACCTCCGCCGCCCTCCATCCACCGCCCCTTCTTTTCCAACACCAACAATACACCTACACCTACACTCCGCCACCGCCGCCGCCTATGGAGCTTGTCACGTGCGGAGGATTCGAACCGATGTTCCATTGTTTTGGAGAAGAACGGCGTCGTATTGGTGGATCCTCTCCCAGTTCTGCTTCCTTCAAAGACCATGGGCTTCTGCAAGATATGATCGTACCCACCTCCTCCTCCTCCTCCTCCTTACACATCCCCAAAGAAGAGTAA

Coding sequence (CDS)

ATGTGGCGTTTTTTCAACAATGTTGCTTCAGACGAGGACGACGCCGCCGGAGTTTCTTCCGGCGACCCAGAGGGGGTGGCCGAAACGTTCCCAATGGACTCGTCTTCCTTTAAGCCCTCCACCTTGTTCGACTTATTTGATCTCTTCTCTGCAGCTACCACCCCTCCGCCCCGGCCGCCCTCCTCCTCCTCCTCCGACCGCCTTCTTAATATTCCTTCAACTCCTTATTCCTCCTCCCTCTCTTCCTCCTCCGATGCCGGCGACCTGGATCCTTTCAACCAACACAAGTTGAAACCCAAAAACAAGAACAAAAAAAGGGCTACACAACCCAGATTTGCGTTCATGACCAAGACCGAAATGGATCATCTGGACGACGGTTACAGGTGGCGGAAGTACGGTCAGAAAGCCGTTAAAAACAGCCCTTACCCAAGAAGCTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAAAAGCGAGTCGAACGATCCTCCCACGACCCTTCCGTCGTCGTCACCACTTACGAAGGTCAACACAATCATCAAAGCCCCATCTTGCCACGTGGATCCCTCTCACCATCAATTTCCACCTCCGCCGCCCTCCATCCACCGCCCCTTCTTTTCCAACACCAACAATACACCTACACCTACACTCCGCCACCGCCGCCGCCTATGGAGCTTGTCACGTGCGGAGGATTCGAACCGATGTTCCATTGTTTTGGAGAAGAACGGCGTCGTATTGGTGGATCCTCTCCCAGTTCTGCTTCCTTCAAAGACCATGGGCTTCTGCAAGATATGATCGTACCCACCTCCTCCTCCTCCTCCTCCTTACACATCCCCAAAGAAGAGTAA

Protein sequence

MWRFFNNVASDEDDAAGVSSGDPEGVAETFPMDSSSFKPSTLFDLFDLFSAATTPPPRPPSSSSSDRLLNIPSTPYSSSLSSSSDAGDLDPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLFQHQQYTYTYTPPPPPPMELVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVPTSSSSSSLHIPKEE

Homology

[Close]

BLAST of Carg18898 vs. NCBI nr
Match: XP_022930460.1 (probable WRKY transcription factor 48 [Cucurbita moschata])

HSP 1 Score: 365.2 bits (936), Expect = 2.1e-97
Identity = 246/253 (97.23%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 30  FPMDSSSFKPSTLFDLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGDL 89
           FPMDSSSFKPSTLFD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    L
Sbjct: 12  FPMDSSSFKPSTLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 71

Query: 90  DPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC 149
           DPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC
Sbjct: 72  DPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC 131

Query: 150 TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLFXX 209
           TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLFXX
Sbjct: 132 TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLFXX 191

Query: 210 XXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVPT 269
           XXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVP 
Sbjct: 192 XXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVP- 251

Query: 270 SSSSSSLHIPKEE 283
           SSSSSSLHIPKEE
Sbjct: 252 SSSSSSLHIPKEE 263

[Close]

BLAST of Carg18898 vs. NCBI nr
Match: XP_023000170.1 (probable WRKY transcription factor 48 [Cucurbita maxima])

HSP 1 Score: 357.8 bits (917), Expect = 3.3e-95
Identity = 221/253 (87.35%), Postives = 224/253 (88.54%), Query Frame = 0


Query: 30  FPMDSSSFKPSTLFDLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGDL 89
           FPMDSSSFKPSTLFDLF        XXXXXXXXXXXXXXXXXX            D GDL
Sbjct: 15  FPMDSSSFKPSTLFDLF----DLFSXXXXXXXXXXXXXXXXXXLLNIPSTPNSSSDTGDL 74

Query: 90  DPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC 149
           DPFN+HKLKPKNKN KRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC
Sbjct: 75  DPFNKHKLKPKNKNIKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC 134

Query: 150 TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLFXX 209
           TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPP LLF  
Sbjct: 135 TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPSLLFQH 194

Query: 210 XXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVPT 269
           XXXXXXXXXXXXXXX +V CGGFEPMFHCFG+ERRRIGGSSPSSASFKDHGLLQDMIVP 
Sbjct: 195 XXXXXXXXXXXXXXXEVVRCGGFEPMFHCFGQERRRIGGSSPSSASFKDHGLLQDMIVP- 254

Query: 270 SSSSSSLHIPKEE 283
           SSSSSSLHI KEE
Sbjct: 255 SSSSSSLHILKEE 262

[Close]

BLAST of Carg18898 vs. NCBI nr
Match: XP_023522245.1 (probable WRKY transcription factor 48 [Cucurbita pepo subsp. pepo] >XP_023514096.1 probable WRKY transcription factor 48 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 9.0e-85
Identity = 230/256 (89.84%), Postives = 232/256 (90.62%), Query Frame = 0


Query: 30  FPMDSSSFKPSTLFDLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGDL 89
           FPMDSSSFKPSTLFD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    L
Sbjct: 12  FPMDSSSFKPSTLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 71

Query: 90  DPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC 149
           DPFNQHKLKPK KN+KRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC
Sbjct: 72  DPFNQHKLKPKIKNEKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRC 131

Query: 150 TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHP--PPLLF 209
           TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLS SISTSAALHP       
Sbjct: 132 TTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSASISTSAALHPXXXXXXX 191

Query: 210 XXXXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIV 269
           XXXXXXXXXXXXXXXXXXLVTCGGFEPMF CFGEERRRIGGSSPSSASFKDHGLLQDMIV
Sbjct: 192 XXXXXXXXXXXXXXXXXXLVTCGGFEPMFQCFGEERRRIGGSSPSSASFKDHGLLQDMIV 251

Query: 270 P-TSSSSSSLHIPKEE 283
           P        +HIPKEE
Sbjct: 252 PXXXXXXXXVHIPKEE 267

[Close]

BLAST of Carg18898 vs. NCBI nr
Match: XP_023006474.1 (probable WRKY transcription factor 48 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 3.9e-56
Identity = 127/201 (63.18%), Postives = 143/201 (71.14%), Query Frame = 0


Query: 85  DAGDL---DPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSP 144
           D GDL    PFN+ +LK K KN+KR  +PRFAFMTK+E+DHLDDGYRWRKYGQKAVKNSP
Sbjct: 91  DDGDLREKSPFNK-QLKAKKKNQKRIREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSP 150

Query: 145 YPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALH 204
           YPRSYYRCTTAGCGVKKRVERSS DPSVVVTTYEGQH HQSPI+PRG+L  + + + A  
Sbjct: 151 YPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHIHQSPIMPRGAL--TAAAAFASP 210

Query: 205 PPPLLFXXXXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGL 264
            PPL+F                        F+  FH FGEERRRI G      SF+DHGL
Sbjct: 211 QPPLVFPQPQYTYTPAPPVDVR--------FDAAFHSFGEERRRIEG------SFQDHGL 270

Query: 265 LQDMIVPTSSSSSSLHIPKEE 283
           LQDMIVP    SS+LHIP+EE
Sbjct: 271 LQDMIVP----SSALHIPEEE 270

[Close]

BLAST of Carg18898 vs. NCBI nr
Match: XP_011657294.1 (PREDICTED: probable WRKY transcription factor 48 [Cucumis sativus] >KGN47453.1 hypothetical protein Csa_6G327430 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 118/190 (62.11%), Postives = 134/190 (70.53%), Query Frame = 0


Query: 88  DLDPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYY 147
           D  PFN+ +LK K KN+K+  +PRFAFMTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYY
Sbjct: 128 DKSPFNK-QLKAKKKNQKKGREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYY 187

Query: 148 RCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLF 207
           RCTTAGCGVKKRVERSS DPS+VVTTYEGQH HQSPI+PRG+LS +  T +    PPL+F
Sbjct: 188 RCTTAGCGVKKRVERSSDDPSIVVTTYEGQHTHQSPIMPRGALSSTAFTPSPQQQPPLVF 247

Query: 208 --XXXXXXXXXXXXXXXXXXLVTC-GGFEPMFHCFGEERRRI------GGSSPSSASFKD 267
                               +VTC GGF  +FH FGEERR I              SF+D
Sbjct: 248 SQPQQLYRNQFTYAPAPPADVVTCGGGFGHVFHSFGEERRLIXXXXXXXXXXXXXXSFQD 307

Query: 268 HGLLQDMIVP 269
           HGLLQDMIVP
Sbjct: 308 HGLLQDMIVP 316

[Close]

BLAST of Carg18898 vs. TAIR10
Match: AT5G49520.1 (WRKY DNA-binding protein 48)

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-37
Identity = 89/195 (45.64%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 107 ATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHD 166
           A + RFAF+TK+++D+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCGVKKRVERSS D
Sbjct: 204 AREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDD 263

Query: 167 PSVVVTTYEGQHNHQSPILPRGSL----SPSI--------STSAALHPPPLL-------F 226
           PS+V+TTYEGQH H  P+ PRG +    SP +        S+S ++  P  L       +
Sbjct: 264 PSIVMTTYEGQHTHPFPMTPRGHIGMLTSPILDHGATTASSSSFSIPQPRYLLTQHHQPY 323

Query: 227 XXXXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIV 283
                                  G    F  FG +  +   S+ +S+S +DHGLLQD I+
Sbjct: 324 NMYNNNSLSMINRRSSDGTFVNPGPSSSFPGFGYDMSQ--ASTSTSSSIRDHGLLQD-IL 383

[Close]

BLAST of Carg18898 vs. TAIR10
Match: AT4G18170.1 (WRKY DNA-binding protein 28)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 72/117 (61.54%), Postives = 85/117 (72.65%), Query Frame = 0


Query: 87  GDLDPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSY 146
           G+ D  ++   K K    K+  +PR +FMTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSY
Sbjct: 135 GEEDQISKKVGKTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSY 194

Query: 147 YRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPP 204
           YRCTT  C VKKRVERS  DP+VV+TTYEGQHNH  P   RGS + +   SA L  P
Sbjct: 195 YRCTTQKCNVKKRVERSFQDPTVVITTYEGQHNHPIPTNLRGSSAAAAMFSADLMTP 251

[Close]

BLAST of Carg18898 vs. TAIR10
Match: AT1G69310.1 (WRKY DNA-binding protein 57)

HSP 1 Score: 146.0 bits (367), Expect = 3.6e-35
Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 105 KRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS 164
           KR  QPRFAFMTK+++D+L+DGYRWRKYGQKAVKNSP+PRSYYRCT + C VKKRVERSS
Sbjct: 128 KRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSS 187

Query: 165 HDPSVVVTTYEGQHNHQSPILPRGSL----SPSISTSAALHPPPL 206
            DPS+V+TTYEGQH HQ+   PRG +     P   TS    PPPL
Sbjct: 188 DDPSIVITTYEGQHCHQTIGFPRGGILTAHDPHSFTSHHHLPPPL 232

[Close]

BLAST of Carg18898 vs. TAIR10
Match: AT2G47260.1 (WRKY DNA-binding protein 23)

HSP 1 Score: 138.3 bits (347), Expect = 7.4e-33
Identity = 95/187 (50.80%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 109 QPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPS 168
           + R AFMTK+E+DHL+DGYRWRKYGQKAVKNSP+PRSYYRCTTA C VKKRVERS  DPS
Sbjct: 159 EARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPS 218

Query: 169 VVVTTYEGQHNHQSPILPR--------GSLSPSISTSAALHPPPL----LFXXXXXXXXX 228
            VVTTYEGQH H SP+  R        GS   + S        P+    L          
Sbjct: 219 TVVTTYEGQHTHISPLTSRPISTGGFFGSSGAASSLGNGCFGFPIDGSTLISPQFQQLVQ 278

Query: 229 XXXXXXXXXLVTC-GGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVPTSSSSSS 283
           XXXXXXXXXL++C GG     +    E         S    KD+GLLQD +VP+      
Sbjct: 279 XXXXXXXXXLMSCFGGVNEYLNSHANEYGDDNRVKKSRVLVKDNGLLQD-VVPS------ 337

[Close]

BLAST of Carg18898 vs. TAIR10
Match: AT1G29860.1 (WRKY DNA-binding protein 71)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-32
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 111 RFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVV 170
           R AFMTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DPS+V
Sbjct: 123 RVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIV 182

Query: 171 VTTYEGQHNHQSPILPRGSLS 192
           +TTYEG+HNH  P   RG+++
Sbjct: 183 ITTYEGKHNHPIPSTLRGTVA 203

[Close]

BLAST of Carg18898 vs. Swiss-Prot
Match: sp|Q9FGZ4|WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35
Identity = 89/195 (45.64%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 107 ATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHD 166
           A + RFAF+TK+++D+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCGVKKRVERSS D
Sbjct: 204 AREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDD 263

Query: 167 PSVVVTTYEGQHNHQSPILPRGSL----SPSI--------STSAALHPPPLL-------F 226
           PS+V+TTYEGQH H  P+ PRG +    SP +        S+S ++  P  L       +
Sbjct: 264 PSIVMTTYEGQHTHPFPMTPRGHIGMLTSPILDHGATTASSSSFSIPQPRYLLTQHHQPY 323

Query: 227 XXXXXXXXXXXXXXXXXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIV 283
                                  G    F  FG +  +   S+ +S+S +DHGLLQD I+
Sbjct: 324 NMYNNNSLSMINRRSSDGTFVNPGPSSSFPGFGYDMSQ--ASTSTSSSIRDHGLLQD-IL 383

[Close]

BLAST of Carg18898 vs. Swiss-Prot
Match: sp|Q8VWJ2|WRK28_ARATH (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.9e-34
Identity = 72/117 (61.54%), Postives = 85/117 (72.65%), Query Frame = 0


Query: 87  GDLDPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSY 146
           G+ D  ++   K K    K+  +PR +FMTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSY
Sbjct: 135 GEEDQISKKVGKTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSY 194

Query: 147 YRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPP 204
           YRCTT  C VKKRVERS  DP+VV+TTYEGQHNH  P   RGS + +   SA L  P
Sbjct: 195 YRCTTQKCNVKKRVERSFQDPTVVITTYEGQHNHPIPTNLRGSSAAAAMFSADLMTP 251

[Close]

BLAST of Carg18898 vs. Swiss-Prot
Match: sp|Q9C983|WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.4e-34
Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 105 KRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSS 164
           KR  QPRFAFMTK+++D+L+DGYRWRKYGQKAVKNSP+PRSYYRCT + C VKKRVERSS
Sbjct: 128 KRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSS 187

Query: 165 HDPSVVVTTYEGQHNHQSPILPRGSL----SPSISTSAALHPPPL 206
            DPS+V+TTYEGQH HQ+   PRG +     P   TS    PPPL
Sbjct: 188 DDPSIVITTYEGQHCHQTIGFPRGGILTAHDPHSFTSHHHLPPPL 232

[Close]

BLAST of Carg18898 vs. Swiss-Prot
Match: sp|O22900|WRK23_ARATH (WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 95/187 (50.80%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 109 QPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPS 168
           + R AFMTK+E+DHL+DGYRWRKYGQKAVKNSP+PRSYYRCTTA C VKKRVERS  DPS
Sbjct: 159 EARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPS 218

Query: 169 VVVTTYEGQHNHQSPILPR--------GSLSPSISTSAALHPPPL----LFXXXXXXXXX 228
            VVTTYEGQH H SP+  R        GS   + S        P+    L          
Sbjct: 219 TVVTTYEGQHTHISPLTSRPISTGGFFGSSGAASSLGNGCFGFPIDGSTLISPQFQQLVQ 278

Query: 229 XXXXXXXXXLVTC-GGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVPTSSSSSS 283
           XXXXXXXXXL++C GG     +    E         S    KD+GLLQD +VP+      
Sbjct: 279 XXXXXXXXXLMSCFGGVNEYLNSHANEYGDDNRVKKSRVLVKDNGLLQD-VVPS------ 337

[Close]

BLAST of Carg18898 vs. Swiss-Prot
Match: sp|Q93WV4|WRK71_ARATH (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.0e-31
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 111 RFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVV 170
           R AFMTK+E+DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKRVERS  DPS+V
Sbjct: 123 RVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIV 182

Query: 171 VTTYEGQHNHQSPILPRGSLS 192
           +TTYEG+HNH  P   RG+++
Sbjct: 183 ITTYEGKHNHPIPSTLRGTVA 203

[Close]

BLAST of Carg18898 vs. TrEMBL
Match: tr|A0A0A0KD61|A0A0A0KD61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327430 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 8.4e-55
Identity = 118/190 (62.11%), Postives = 134/190 (70.53%), Query Frame = 0


Query: 88  DLDPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYY 147
           D  PFN+ +LK K KN+K+  +PRFAFMTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYY
Sbjct: 128 DKSPFNK-QLKAKKKNQKKGREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYY 187

Query: 148 RCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLF 207
           RCTTAGCGVKKRVERSS DPS+VVTTYEGQH HQSPI+PRG+LS +  T +    PPL+F
Sbjct: 188 RCTTAGCGVKKRVERSSDDPSIVVTTYEGQHTHQSPIMPRGALSSTAFTPSPQQQPPLVF 247

Query: 208 --XXXXXXXXXXXXXXXXXXLVTC-GGFEPMFHCFGEERRRI------GGSSPSSASFKD 267
                               +VTC GGF  +FH FGEERR I              SF+D
Sbjct: 248 SQPQQLYRNQFTYAPAPPADVVTCGGGFGHVFHSFGEERRLIXXXXXXXXXXXXXXSFQD 307

Query: 268 HGLLQDMIVP 269
           HGLLQDMIVP
Sbjct: 308 HGLLQDMIVP 316

[Close]

BLAST of Carg18898 vs. TrEMBL
Match: tr|A0A1S3CSP9|A0A1S3CSP9_CUCME (LOW QUALITY PROTEIN: probable WRKY transcription factor 48 OS=Cucumis melo OX=3656 GN=LOC103504515 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 119/188 (63.30%), Postives = 138/188 (73.40%), Query Frame = 0


Query: 88  DLDPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYY 147
           D  PFN+ +LK K KN+K+  +PRFAFMTK+E+DHLDDGYRWRKYGQKAVKNSPYPRSYY
Sbjct: 131 DKSPFNK-QLKAK-KNQKKXREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYY 190

Query: 148 RCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAA---LHPPP 207
           RCTTAGCGVKKRVERSS DPS+VVTTYEGQH HQSPI+PRG+LS +  T++       PP
Sbjct: 191 RCTTAGCGVKKRVERSSDDPSIVVTTYEGQHTHQSPIMPRGALSSTAYTASPQQHQQQPP 250

Query: 208 LLF---XXXXXXXXXXXXXXXXXXLVTC-GGFEPMFHCFGEERRRIGGSSPSSASFKDHG 267
           L+F                     +VTC GGF  +FH FGEERRRI   + +  SF+DHG
Sbjct: 251 LVFSSQPQQLYRNQFTYAPAPPVDVVTCGGGFGHVFHSFGEERRRIDDRT-TPDSFQDHG 310

Query: 268 LLQDMIVP 269
           LLQDMIVP
Sbjct: 311 LLQDMIVP 315

[Close]

BLAST of Carg18898 vs. TrEMBL
Match: tr|A0A068LC88|A0A068LC88_GOSHI (WRKY transcription factor 32 OS=Gossypium hirsutum OX=3635 GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.7e-44
Identity = 103/192 (53.65%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 86  AGDLDPFNQHKLKPKNKNKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRS 145
           AG+ +   +  LKP+ KN KR  +PRFAFMTK+++DHLDDGYRWRKYGQKAVKNSPYPRS
Sbjct: 144 AGNDEDKTKKPLKPQKKNPKRQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRS 203

Query: 146 YYRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQSPILPRGSL-----SPSISTSAAL 205
           YYRCTTAGCGVKKRVERSS DP++VVTTYEGQH H  PI+PRG++     S +    + +
Sbjct: 204 YYRCTTAGCGVKKRVERSSDDPTIVVTTYEGQHTHPCPIMPRGAIGIAPDSSAFGAPSFI 263

Query: 206 HPPPLLF----XXXXXXXXXXXXXXXXXXLVTCGG--FEPMFHCFGEERRRIGGSSPSSA 265
            P P+      XXXXXX            + T       P F  F +E+ R    +PS+ 
Sbjct: 264 IPQPMYINHQXXXXXXXQPYIYNSTPSLNITTASSNIIHPSFPGFLQEKPRFSNPNPSAL 323

Query: 266 SFKDHGLLQDMI 267
           S +DHGLLQD++
Sbjct: 324 SHRDHGLLQDIV 335

[Close]

BLAST of Carg18898 vs. TrEMBL
Match: tr|A0A2P5Y105|A0A2P5Y105_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11395 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 92/167 (55.09%), Postives = 109/167 (65.27%), Query Frame = 0


Query: 103 NKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVER 162
           N KR  +PRFAFMTK+++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCT AGCGVKKRVER
Sbjct: 137 NPKRQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTMAGCGVKKRVER 196

Query: 163 SSHDPSVVVTTYEGQHNHQSPILPRGSLSPSISTSAALHPPPLLFXXXXXXXXXXXXXXX 222
           SS DP++VVTTYEGQH H  PI+PRG++  +  +SA                        
Sbjct: 197 SSDDPTIVVTTYEGQHTHPCPIMPRGAIGIAPDSSA------------------------ 256

Query: 223 XXXLVTCGGFEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMIVPT 270
                +     P F  F +E+ R    +PS+ S +DHGLLQD IVPT
Sbjct: 257 ---FASSNIIHPSFPGFLQEKPRFSNPNPSALSHRDHGLLQD-IVPT 275

[Close]

BLAST of Carg18898 vs. TrEMBL
Match: tr|A0A1U8K052|A0A1U8K052_GOSHI (probable WRKY transcription factor 48 OS=Gossypium hirsutum OX=3635 GN=LOC107910567 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.0e-41
Identity = 97/175 (55.43%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 103 NKKRATQPRFAFMTKTEMDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVER 162
           N KR  +PRFAFMTK+++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVER
Sbjct: 170 NPKRQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVER 229

Query: 163 SSHDPSVVVTTYEGQHNHQSPILPRGSL-----SPSISTSAALHPPPLLF----XXXXXX 222
           SS DP++VVTTYEGQH H  PI+PRG++     S +    + + P P+      XXXXXX
Sbjct: 230 SSDDPTIVVTTYEGQHTHPCPIMPRGAIGIAPDSSAFGAPSFIIPQPMYLNHQXXXXXXX 289

Query: 223 XXXXXXXXXXXXLVTCGG--FEPMFHCFGEERRRIGGSSPSSASFKDHGLLQDMI 267
                       + T       P F  F +E+ R    +PS+ S +DHGLLQD++
Sbjct: 290 QPYIYNSTPSLNITTASSNIIHPPFPGFLQEKPRFSNPNPSALSHRDHGLLQDIV 344

The following BLAST results are available for this feature:

BLAST of Carg18898 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930460.1	2.1e-97	97.23	probable WRKY transcription factor 48 [Cucurbita moschata]	[more]
XP_023000170.1	3.3e-95	87.35	probable WRKY transcription factor 48 [Cucurbita maxima]	[more]
XP_023522245.1	9.0e-85	89.84	probable WRKY transcription factor 48 [Cucurbita pepo subsp. pepo] >XP_023514096...	[more]
XP_023006474.1	3.9e-56	63.18	probable WRKY transcription factor 48 [Cucurbita maxima]	[more]
XP_011657294.1	1.3e-54	62.11	PREDICTED: probable WRKY transcription factor 48 [Cucumis sativus] >KGN47453.1 h...	[more]

BLAST of Carg18898 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49520.1	8.5e-37	45.64	WRKY DNA-binding protein 48	[more]
AT4G18170.1	1.6e-35	61.54	WRKY DNA-binding protein 28	[more]
AT1G69310.1	3.6e-35	67.62	WRKY DNA-binding protein 57	[more]
AT2G47260.1	7.4e-33	50.80	WRKY DNA-binding protein 23	[more]
AT1G29860.1	1.7e-32	75.31	WRKY DNA-binding protein 71	[more]

BLAST of Carg18898 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FGZ4\|WRK48_ARATH	1.5e-35	45.64	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 ...	[more]
sp\|Q8VWJ2\|WRK28_ARATH	2.9e-34	61.54	WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1	[more]
sp\|Q9C983\|WRK57_ARATH	6.4e-34	67.62	Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 ...	[more]
sp\|O22900\|WRK23_ARATH	1.3e-31	50.80	WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1	[more]
sp\|Q93WV4\|WRK71_ARATH	3.0e-31	75.31	WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1	[more]

BLAST of Carg18898 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KD61\|A0A0A0KD61_CUCSA	8.4e-55	62.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327430 PE=4 SV=1	[more]
tr\|A0A1S3CSP9\|A0A1S3CSP9_CUCME	1.2e-53	63.30	LOW QUALITY PROTEIN: probable WRKY transcription factor 48 OS=Cucumis melo OX=36...	[more]
tr\|A0A068LC88\|A0A068LC88_GOSHI	6.7e-44	53.65	WRKY transcription factor 32 OS=Gossypium hirsutum OX=3635 GN=WRKY32 PE=2 SV=1	[more]
tr\|A0A2P5Y105\|A0A2P5Y105_GOSBA	1.8e-41	55.09	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11395 PE=4 SV...	[more]
tr\|A0A1U8K052\|A0A1U8K052_GOSHI	4.0e-41	55.43	probable WRKY transcription factor 48 OS=Gossypium hirsutum OX=3635 GN=LOC107910...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036576	WRKY_dom_sf
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18898-RA	Carg18898-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 123..182 e-value: 3.7E-40 score: 149.4
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 124..181 e-value: 3.7E-27 score: 94.3
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 118..183 score: 33.614
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 108..184 e-value: 2.6E-34 score: 118.7
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 115..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..111
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 57..197
None	No IPR available	PANTHER	PTHR31221:SF83	SUBFAMILY NOT NAMED	coord: 57..197

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18898	Cla021806	Watermelon (97103) v1	carwmB0700
Carg18898	Csa3G168410	Cucumber (Chinese Long) v2	carcuB0723
Carg18898	MELO3C006725	Melon (DHL92) v3.5.1	carmeB0701
Carg18898	ClCG05G006660	Watermelon (Charleston Gray)	carwcgB0680
Carg18898	CSPI03G15090	Wild cucumber (PI 183967)	carcpiB0738
Carg18898	Cucsa.252440	Cucumber (Gy14) v1	carcgyB0788
Carg18898	CmaCh17G003790	Cucurbita maxima (Rimu)	carcmaB0985
Carg18898	CmaCh06G015710	Cucurbita maxima (Rimu)	carcmaB0987
Carg18898	CmaCh08G012890	Cucurbita maxima (Rimu)	carcmaB0988
Carg18898	CmoCh08G012540	Cucurbita moschata (Rifu)	carcmoB0960
Carg18898	CmoCh17G003670	Cucurbita moschata (Rifu)	carcmoB0958
Carg18898	CmoCh14G016120	Cucurbita moschata (Rifu)	carcmoB0957
Carg18898	Cp4.1LG17g00040	Cucurbita pepo (Zucchini)	carcpeB0985
Carg18898	Cp4.1LG03g11900	Cucurbita pepo (Zucchini)	carcpeB0986
Carg18898	Cp4.1LG08g05270	Cucurbita pepo (Zucchini)	carcpeB0987
Carg18898	CsGy3G015240	Cucumber (Gy14) v2	carcgybB0700
Carg18898	CsGy6G017300	Cucumber (Gy14) v2	carcgybB0702
Carg18898	MELO3C006725.2	Melon (DHL92) v3.6.1	carmedB0714
Carg18898	CsaV3_3G015290	Cucumber (Chinese Long) v3	carcucB0741
Carg18898	Cla97C10G194390	Watermelon (97103) v2	carwmbB0733
Carg18898	Cla97C05G088270	Watermelon (97103) v2	carwmbB0734
Carg18898	Bhi01G000791	Wax gourd	carwgoB0828

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18898	Carg19612	Silver-seed gourd	carcarB316

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18898	Silver-seed gourd	carcarB085
Carg18898	Cucumber (Gy14) v1	carcgyB0787
Carg18898	Cucurbita pepo (Zucchini)	carcpeB0984
Carg18898	Wild cucumber (PI 183967)	carcpiB0741
Carg18898	Cucumber (Chinese Long) v2	carcuB0726
Carg18898	Cucumber (Chinese Long) v3	carcucB0744
Carg18898	Bottle gourd (USVL1VR-Ls)	carlsiB641
Carg18898	Melon (DHL92) v3.5.1	carmeB0700
Carg18898	Melon (DHL92) v3.6.1	carmedB0713
Carg18898	Watermelon (Charleston Gray)	carwcgB0681
Carg18898	Watermelon (97103) v1	carwmB0701
Carg18898	Watermelon (97103) v2	carwmbB0735
Carg18898	Wax gourd	carwgoB0826