Cp4.1LG16g09330 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g09330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPhytoene synthase
LocationCp4.1LG16 : 8547559 .. 8548969 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCTTCTATTTCCCTTACACCAAACCCTCGTATAGTCATTGGAGAATGCAAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCTACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGCGAGGCAATCTCGGGCCAACCATTCTTCCCAACCGTATAAGACGCTGCATTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGGTAAGGGGAAAACAGATCACATTTTTTAAGCGAACCCATTTCGGAAAGCCCACGAAAGTGAGGAGTAAGTTTTGAGTTTTTGTTGGTGCAGTTTGGTGTAGGAGAACAGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGGTGCAGTGAGCTGAGAGAAGCTTTCCTGTTTTTTATATGTGTCTTGCTGGCTTGGGCTCATACTTGTTGTGCGTGTTTGTTTTGTTTTCTGAAAGCAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACTAGAAAGTGTCGATATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGAGTAAGCTATTCTTTTTCTTTCTCTATATCTTACTTCTATTGTTCATGCAACTAAATATTGCGTTTTGAACTTGTTTCAGTGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGGGTTATGTGACAATGATATATTGTCGATGAGAGTGACTGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGCCCAGCCGTTGGCCGGTATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATTGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCTTTCACTGA

mRNA sequence

ATGACTTCTTCTATTTCCCTTACACCAAACCCTCGTATAGTCATTGGAGAATGCAAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCTACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGCGAGGCAATCTCGGGCCAACCATTCTTCCCAACCGTATAAGACGCTGCATTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGTTTGGTGTAGGAGAACAGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACTAGAAAGTGTCGATATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGATGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGGGTTATGTGACAATGATATATTGTCGATGAGAGTGACTGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGCCCAGCCGTTGGCCGGTATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATTGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCTTTCACTGA

Coding sequence (CDS)

ATGACTTCTTCTATTTCCCTTACACCAAACCCTCGTATAGTCATTGGAGAATGCAAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCTACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGCGAGGCAATCTCGGGCCAACCATTCTTCCCAACCGTATAAGACGCTGCATTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGTTTGGTGTAGGAGAACAGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACTAGAAAGTGTCGATATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGATGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGGGTTATGTGACAATGATATATTGTCGATGAGAGTGACTGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGCCCAGCCGTTGGCCGGTATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATTGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCTTTCACTGA

Protein sequence

MTSSISLTPNPRIVIGECKGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVARQSRANHSSQPYKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPSLLFH
Homology
[Close]
BLAST of Cp4.1LG16g09330 vs. Swiss-Prot
Match: PSY1_SOLLC (Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2)

HSP 1 Score: 448.4 bits (1152), Expect = 8.0e-125
Identity = 222/373 (59.52%), Postives = 281/373 (75.34%), Query Frame = 1 

Query: 6   SLTPNPRIVIGECKGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIV 65
           +L  N RI  G  K + +  R    R  ++A P+  +T+     S+Q +    L    +V
Sbjct: 38  NLVSNERINRGGGK-QTNNGRKFSVRSAILATPSGERTMT----SEQMVYDVVLRQAALV 97

Query: 66  ARQSRANHSSQPYKTLHL--HPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWA 125
            RQ R+ +  +    + +  +   L EAY+ C ++CAEYA+TF LGT+LMT ER+RAIWA
Sbjct: 98  KRQLRSTNELEVKPDIPIPGNLGLLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWA 157

Query: 126 IYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMK 185
           IYVWCRRTDELVDGPNA+Y+ P  LDRWE RL+D+F G P+D+LD ALS TVS FP+D++
Sbjct: 158 IYVWCRRTDELVDGPNASYITPAALDRWENRLEDVFNGRPFDMLDGALSDTVSNFPVDIQ 217

Query: 186 PFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTAS 245
           PF+DMIEGMRMD RK RY +F+ELYLYCYYVAGTVGLMSVP+MGIAP+S  +++++Y A+
Sbjct: 218 PFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAA 277

Query: 246 LHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIK 305
           L LGI NQLTNILRDVGEDA RGRVYLPQDELAQ GL D DI + RVTDKWR FMK+QI 
Sbjct: 278 LALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIH 337

Query: 306 RARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLT 365
           RAR +F +AEKG ++L   SR+PVW+SL+LYRKIL+ IE NDYNNFTKRAYV +SKKL+ 
Sbjct: 338 RARKFFDEAEKGVTELSSASRFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSKKLIA 397

Query: 366 LPLAYTKAISAPS 377
           LP+AY K++  P+
Sbjct: 398 LPIAYAKSLVPPT 405

[Close]
BLAST of Cp4.1LG16g09330 vs. Swiss-Prot
Match: PSY_CAPAN (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 PE=1 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.2e-123
Identity = 213/344 (61.92%), Postives = 269/344 (78.20%), Query Frame = 1 

Query: 31  RGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVARQSRANHSSQPYKTLHLHPSF--L 90
           R  ++A P    T+     S++ +    L    +V RQ R+       K + +  +   L
Sbjct: 74  RSAIVATPAGEMTMS----SERMVYDVVLRQAALVKRQLRSTDELDVKKDIPIPGTLGLL 133

Query: 91  EEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVL 150
            EAY+ C ++CAEYA+TFYLGT+LMT ER++AIWAIYVWCRRTDELVDGPNA+++ P  L
Sbjct: 134 SEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPAAL 193

Query: 151 DRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELY 210
           DRWE+RL+D+F G P+D+LDAALS TVSKFP+D++PF+DMIEGMRMD RK RY +F+ELY
Sbjct: 194 DRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFDELY 253

Query: 211 LYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRV 270
           LYCYYVAGTVGLMSVP+MGIAP+S  +++++Y A+L LGI NQLTNILRDVGEDA RGRV
Sbjct: 254 LYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRV 313

Query: 271 YLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSRWPVW 330
           YLPQDELAQ GL D DI + RVTDKWR FMK+QI+RAR +F +AEKG ++L   SRWPV 
Sbjct: 314 YLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEAEKGVTELSAASRWPVL 373

Query: 331 SSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAI 373
           +SL+LYR+IL+ IE NDYNNFTKRAYV + KKL+ LP+AY K++
Sbjct: 374 ASLLLYRRILDEIEANDYNNFTKRAYVSKPKKLIALPIAYAKSL 413

[Close]
BLAST of Cp4.1LG16g09330 vs. Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-123
Identity = 205/292 (70.21%), Postives = 250/292 (85.62%), Query Frame = 1 

Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNP 145
           S L EAY+ C ++CAEYA+TFYLGT+LMT ERQ+AIWAIYVWCRRTDELVDGPNA+++ P
Sbjct: 131 SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 190

Query: 146 EVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFE 205
             LDRWE RL+++F+G P+D+LDAAL+ TV+KFP+D++PFKDMIEGMRMD RK RY +F+
Sbjct: 191 TALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFD 250

Query: 206 ELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQL-TNILRDVGEDAL 265
           ELYLYCYYVAGTVGLMSVPVMGIAP+S  S++++Y A+L LGI NQ   NILRDVGEDA 
Sbjct: 251 ELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDAR 310

Query: 266 RGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSR 325
           RGR+YLPQDELAQ GL D DI + RVTDKWR FMK QIKRAR +F +AEKG  +L+K SR
Sbjct: 311 RGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASR 370

Query: 326 WPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPS 377
           WPVW+SL+LYR+IL+ IE NDY+NFTKRAYV ++KK+L LP+AY +A+  PS
Sbjct: 371 WPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGPS 422

[Close]
BLAST of Cp4.1LG16g09330 vs. Swiss-Prot
Match: PSY_MAIZE (Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 5.8e-123
Identity = 202/291 (69.42%), Postives = 250/291 (85.91%), Query Frame = 1 

Query: 88  LEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEV 147
           L+EAY+ C +IC EYA+TFYLGT+LMT+ER+RAIWAIYVWCRRTDELVDGPNA Y+ P  
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 148 LDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEEL 207
           LDRWE+RL+D+F G PYD+LDAALS T+S+FP+D++PF+DMIEGMR D RK RY++F+EL
Sbjct: 175 LDRWEKRLEDLFTGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNFDEL 234

Query: 208 YLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGR 267
           Y+YCYYVAGTVGLMSVPVMGIA +S  +++++Y+A+L LGI NQLTNILRDVGEDA RGR
Sbjct: 235 YMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDARRGR 294

Query: 268 VYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSRWPV 327
           +YLPQDELAQ GL D DI    VT++WR FMK QIKRAR +F++AE+G ++L + SRWPV
Sbjct: 295 IYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVNELSQASRWPV 354

Query: 328 WSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPSLL 379
           W+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KKLL LP+AY K++  P  L
Sbjct: 355 WASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAYGKSLLLPCSL 405

[Close]
BLAST of Cp4.1LG16g09330 vs. Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 7.5e-123
Identity = 212/348 (60.92%), Postives = 268/348 (77.01%), Query Frame = 1 

Query: 31  RGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVARQSRANHSSQPYKTLHLHPS---F 90
           R  ++A P    T+     S+Q +    L    +V  Q++++  S   K   + P     
Sbjct: 69  RSSLVANPAGEATIS----SEQKVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTVYL 128

Query: 91  LEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEV 150
           L++AY+ C ++CAEYA+TFYLGTLLMT ER+RAIWAIYVWCRRTDELVDG NA+++ P  
Sbjct: 129 LKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSA 188

Query: 151 LDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEEL 210
           LDRWE RL+D+F G PYD+ DAALS TVS+FP+D++PF DM+EGMRMD +K RY +F+EL
Sbjct: 189 LDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDEL 248

Query: 211 YLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGR 270
           YLYCYYVAGTVGLMSVPVMGIAP+S   ++++Y A+L LGI NQLTNILRDVGEDA RGR
Sbjct: 249 YLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDARRGR 308

Query: 271 VYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSRWPV 330
           +YLPQDELA+ GL D D+ + +VTDKWR FMK QIKRAR +F+QAEKG ++L + SRWPV
Sbjct: 309 IYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASRWPV 368

Query: 331 WSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAP 376
           W+SL+LYR+IL+ IE NDYNNFTKRAYV + K+L  LPLAY K++  P
Sbjct: 369 WASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAYGKSLLIP 412

[Close]
BLAST of Cp4.1LG16g09330 vs. TrEMBL
Match: A0A0A0KZ43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280510 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 7.5e-178
Identity = 306/385 (79.48%), Postives = 340/385 (88.31%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP P + IGECKGK    R ++I + GGV AAP S +TLKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 61  LHVDEIVARQSRANHSSQPY---KTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIV RQS  NH  +     + +    SFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEGCKRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEGCPYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWR 300
           + T+Y+A+LHLGIGNQLTNILRDVGEDA+RGRVYLPQDEL QFGLCD DIL MRV+D+WR
Sbjct: 241 THTVYSAALHLGIGNQLTNILRDVGEDAMRGRVYLPQDELTQFGLCDEDILRMRVSDEWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWPVWSSLMLYR+ILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYREILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLFH 381
           GRSKK L LPLAYTK+IS P+L+F+
Sbjct: 361 GRSKKFLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of Cp4.1LG16g09330 vs. TrEMBL
Match: F8U9A7_CUCME (Phytoene synthase OS=Cucumis melo GN=PSY2 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 1.7e-177
Identity = 310/385 (80.52%), Postives = 338/385 (87.79%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP     IGECKG     R + I + GG+IAAP S +TLK  TLSKQGIPL  
Sbjct: 1   MSSCVFVTPKSLTFIGECKGNVFPKRFKTIRNGGGIIAAPRSSETLKLQTLSKQGIPLDH 60

Query: 61  LHVDEIVARQSRANHSSQPY---KTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIV RQS  NH  +     K +   PSFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEWCKKKMKFQPSFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEG PYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGRPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWR 300
           + TIY+A+LHLGIGNQLTNILRDVGEDA RGRVYLPQDELAQFGLCD DIL MRV+DKWR
Sbjct: 241 THTIYSAALHLGIGNQLTNILRDVGEDATRGRVYLPQDELAQFGLCDADILRMRVSDKWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLFH 381
           GRSKKLL LPLAYTK+IS P+L+F+
Sbjct: 361 GRSKKLLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of Cp4.1LG16g09330 vs. TrEMBL
Match: A0A0K1L5A0_MALDO (Phytoene synthase OS=Malus domestica GN=PSY4 PE=2 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.3e-150
Identity = 264/382 (69.11%), Postives = 316/382 (82.72%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGK-RSRVRVIMS-RGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M S+IS     +  IGE  G+ R R+ ++ + +  VI AP       FP LS QG PLAD
Sbjct: 1   MCSTISFAG--KTYIGESNGRIRRRISMVTAAKAQVITAPKQRSRPVFPELSIQGFPLAD 60

Query: 61  LHVDEIVARQS--RANHSSQPYKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKE 120
           LHV EIV RQS  R+       +    +PSFLEEAYE C+ +CAEYA+TFYLGTLLMT+E
Sbjct: 61  LHVQEIVQRQSQTRSVDGEGGRRRPQFNPSFLEEAYERCKNLCAEYAKTFYLGTLLMTEE 120

Query: 121 RQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVS 180
           RQ+AIWAIYVWCRRTDELVDGPN+ YM+ EVLDRWE+RL+D+FEG PYD+LDAAL+HTV 
Sbjct: 121 RQKAIWAIYVWCRRTDELVDGPNSDYMSSEVLDRWEQRLEDVFEGRPYDMLDAALTHTVF 180

Query: 181 KFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSS 240
            FPLD+KPF+DMIEGMRMDT+KCRY +F+ELYLYCYYVAGTVGLMSVP+MGIAPDS +S+
Sbjct: 181 NFPLDIKPFRDMIEGMRMDTQKCRYHNFQELYLYCYYVAGTVGLMSVPIMGIAPDSRIST 240

Query: 241 QTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWRE 300
           Q+ Y ++L+LGIGNQLTNILRDVGEDA+RGRVYLPQDELAQFGLCDND+ S +VTD+WR 
Sbjct: 241 QSTYDSALYLGIGNQLTNILRDVGEDAMRGRVYLPQDELAQFGLCDNDVFSRKVTDQWRA 300

Query: 301 FMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVG 360
           FMK+QIKRARFYF  AE+GASQLDK SRWPVWSSL++YR IL+AIE+NDY+N TKRAYV 
Sbjct: 301 FMKKQIKRARFYFNVAEEGASQLDKASRWPVWSSLLIYRNILDAIEDNDYDNLTKRAYVK 360

Query: 361 RSKKLLTLPLAYTKAISAPSLL 379
           R+KKLL LPLAYT+++S  +L+
Sbjct: 361 RAKKLLMLPLAYTRSLSTHTLM 380

[Close]
BLAST of Cp4.1LG16g09330 vs. TrEMBL
Match: A0A097F715_9ROSA (Phytoene synthase 3 OS=Eriobotrya japonica GN=PSY3 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.7e-150
Identity = 265/382 (69.37%), Postives = 314/382 (82.20%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M S+IS     +  IGE  G+  R +  V  ++  VI AP       FP LS QGIPLAD
Sbjct: 1   MCSTISFAG--KTYIGESNGRIRRRKSMVTAAKAQVITAPKQRSRPVFPELSIQGIPLAD 60

Query: 61  LHVDEIVARQS--RANHSSQPYKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKE 120
           LHV EIV RQS  R+       +    +PSFLEEAYE C+ +CAEYA+TFYLGTLLMT+E
Sbjct: 61  LHVQEIVQRQSQTRSVDGEGSRRRPRFNPSFLEEAYERCKNLCAEYAKTFYLGTLLMTEE 120

Query: 121 RQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVS 180
           RQ+AIWAIYVWCRRTDELVDGPN+ YM+ EVLDRWE+RL+DIFEG PYD+LDAAL++TVS
Sbjct: 121 RQKAIWAIYVWCRRTDELVDGPNSGYMSSEVLDRWEQRLEDIFEGRPYDILDAALTNTVS 180

Query: 181 KFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSS 240
            FPLD+KPF+DMIEGMRMDT+KCRY +F+ELYLYCYY+AGTVGLMSVPVMGIAPDS +S+
Sbjct: 181 NFPLDIKPFRDMIEGMRMDTQKCRYQNFQELYLYCYYMAGTVGLMSVPVMGIAPDSRISA 240

Query: 241 QTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWRE 300
           Q+ Y ++L+LGIGNQLTNILRDVGEDA+RGRVYLPQDELA+FGLCDND+ S +VTDKWR 
Sbjct: 241 QSTYDSALYLGIGNQLTNILRDVGEDAMRGRVYLPQDELARFGLCDNDVFSRKVTDKWRA 300

Query: 301 FMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVG 360
           FMKEQI RARF F  AE+GASQLDK SRWPVWSSL++YR IL+AIE+NDY+N TKRAYV 
Sbjct: 301 FMKEQITRARFCFNLAEEGASQLDKASRWPVWSSLLIYRNILDAIEDNDYDNLTKRAYVQ 360

Query: 361 RSKKLLTLPLAYTKAISAPSLL 379
           R+KKLL LPLAYT+++S  +L+
Sbjct: 361 RAKKLLMLPLAYTRSLSTHNLM 380

[Close]
BLAST of Cp4.1LG16g09330 vs. TrEMBL
Match: B9GLH2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s04490g PE=4 SV=2)

HSP 1 Score: 540.4 bits (1391), Expect = 1.7e-150
Identity = 269/380 (70.79%), Postives = 308/380 (81.05%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           M S+ SL+  P       K   S+  V  +R  VIAAP       FP L K GIP  DL 
Sbjct: 1   MCSTFSLSAKPCTGADNGKFLHSKSLVTRARAEVIAAPKRSSQRAFPRLLKHGIPHTDLQ 60

Query: 61  VDEIVARQSRANHSSQP--YKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQ 120
           V EIV RQS+AN  S+    +    HP+FLEEAYE CR ICAEYA+TFYLGT LMT+ERQ
Sbjct: 61  VHEIVERQSQANSLSKQDICRKPEFHPAFLEEAYERCRNICAEYAKTFYLGTRLMTEERQ 120

Query: 121 RAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKF 180
           +A WAIYVWCRRTDELVDGPNA  M+  VLDRWEERLQDIF+G PYD+LDAAL+ T+SKF
Sbjct: 121 KATWAIYVWCRRTDELVDGPNAVLMSTAVLDRWEERLQDIFDGRPYDMLDAALTDTISKF 180

Query: 181 PLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQT 240
           PLD+KPF+DMIEGMRMDTRK RYD+F+ELYLYCYYVAGTVGLMSVPVMGIA +S  S+Q+
Sbjct: 181 PLDIKPFRDMIEGMRMDTRKFRYDNFQELYLYCYYVAGTVGLMSVPVMGIAAESEASAQS 240

Query: 241 IYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFM 300
           IY A+L+LGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCD D+ + +VTD WREFM
Sbjct: 241 IYNAALYLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDQDVFARKVTDGWREFM 300

Query: 301 KEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRS 360
           KEQI RARFYF  AE+GAS+L+K SRWPVWSSL++Y+KIL+AIE+NDY+NFTKRAYVGR+
Sbjct: 301 KEQIIRARFYFNLAEEGASKLEKASRWPVWSSLLVYQKILDAIEDNDYDNFTKRAYVGRT 360

Query: 361 KKLLTLPLAYTKAISAPSLL 379
           KKLLTLPLAYTKA S   L+
Sbjct: 361 KKLLTLPLAYTKAQSMSRLI 380

[Close]
BLAST of Cp4.1LG16g09330 vs. TAIR10
Match: AT5G17230.3 (AT5G17230.3 PHYTOENE SYNTHASE)

HSP 1 Score: 427.6 bits (1098), Expect = 8.3e-120
Identity = 199/302 (65.89%), Postives = 245/302 (81.13%), Query Frame = 1 

Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYV---------------WCRR 145
           S L EAY+ C ++CAEYA+TFYLGTLLMT ER++AIWAIYV               WCRR
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRR 185

Query: 146 TDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIE 205
           TDELVDGPNA+++ P  LDRWE RL+D+F G P+D+LDAAL+ TV+++P+D++PF+DMIE
Sbjct: 186 TDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIE 245

Query: 206 GMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGN 265
           GMRMD +K RY +F++LYLYCYYVAGTVGLMSVPVMGI P S  +++++Y A+L LGI N
Sbjct: 246 GMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIAN 305

Query: 266 QLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARFYFK 325
           QLTNILRDVGEDA RGRVYLPQDELAQ GL D DI + +VTDKWR FMK Q+KRAR +F 
Sbjct: 306 QLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFD 365

Query: 326 QAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTK 373
           +AEKG ++L   SRWPVW+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KK+  LPLAY K
Sbjct: 366 EAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 425

[Close]
BLAST of Cp4.1LG16g09330 vs. NCBI nr
Match: gi|449448822|ref|XP_004142164.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 631.3 bits (1627), Expect = 1.1e-177
Identity = 306/385 (79.48%), Postives = 340/385 (88.31%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP P + IGECKGK    R ++I + GGV AAP S +TLKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 61  LHVDEIVARQSRANHSSQPY---KTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIV RQS  NH  +     + +    SFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEGCKRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEGCPYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWR 300
           + T+Y+A+LHLGIGNQLTNILRDVGEDA+RGRVYLPQDEL QFGLCD DIL MRV+D+WR
Sbjct: 241 THTVYSAALHLGIGNQLTNILRDVGEDAMRGRVYLPQDELTQFGLCDEDILRMRVSDEWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWPVWSSLMLYR+ILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYREILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLFH 381
           GRSKK L LPLAYTK+IS P+L+F+
Sbjct: 361 GRSKKFLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of Cp4.1LG16g09330 vs. NCBI nr
Match: gi|659097776|ref|XP_008449808.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 630.2 bits (1624), Expect = 2.4e-177
Identity = 310/385 (80.52%), Postives = 338/385 (87.79%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP     IGECKG     R + I + GG+IAAP S +TLK  TLSKQGIPL  
Sbjct: 1   MSSCVFVTPKSLTFIGECKGNVFPKRFKTIRNGGGIIAAPRSSETLKLQTLSKQGIPLDH 60

Query: 61  LHVDEIVARQSRANHSSQPY---KTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIV RQS  NH  +     K +   PSFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEWCKKKMKFQPSFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEG PYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGRPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWR 300
           + TIY+A+LHLGIGNQLTNILRDVGEDA RGRVYLPQDELAQFGLCD DIL MRV+DKWR
Sbjct: 241 THTIYSAALHLGIGNQLTNILRDVGEDATRGRVYLPQDELAQFGLCDADILRMRVSDKWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLFH 381
           GRSKKLL LPLAYTK+IS P+L+F+
Sbjct: 361 GRSKKLLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of Cp4.1LG16g09330 vs. NCBI nr
Match: gi|470120189|ref|XP_004296190.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 555.4 bits (1430), Expect = 7.5e-155
Identity = 271/380 (71.32%), Postives = 313/380 (82.37%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKGKRSRVRVIMS--RGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S+ SL P P   I E  G     + +++  R  VI AP    T  FP LS QGIP+AD
Sbjct: 1   MSSTFSLAPKP--YIRESNGNLLPPKSMLTTIRAEVITAPKQRNTRSFPELSIQGIPVAD 60

Query: 61  LHVDEIVARQSRANHSSQPYKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQ 120
           LHV EIV RQS++       +     PSFLEEAY+ CR ICAEYA+TFYLGTLLMT+ERQ
Sbjct: 61  LHVQEIVQRQSKSIAKVGTSRKSQFDPSFLEEAYQRCRNICAEYAKTFYLGTLLMTEERQ 120

Query: 121 RAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKF 180
           +AIWAIYVWCRRTDELVDGPN+ +MN EVLD WEERL+DIFEG PYD+LDAAL+HTV  F
Sbjct: 121 KAIWAIYVWCRRTDELVDGPNSGHMNSEVLDSWEERLEDIFEGRPYDMLDAALTHTVLSF 180

Query: 181 PLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQT 240
           PLD+KPF+DMIEGMRMDTRKCRY +F+ELYLYCYYVAGTVGLMSVPVMGIAPDS  S+Q+
Sbjct: 181 PLDIKPFRDMIEGMRMDTRKCRYQNFQELYLYCYYVAGTVGLMSVPVMGIAPDSLNSTQS 240

Query: 241 IYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFM 300
            Y A+L+LGIGNQLTNILRDVGEDA RGRVYLPQDELAQFGLCDND+ + +VTD+WR+FM
Sbjct: 241 TYDAALYLGIGNQLTNILRDVGEDAARGRVYLPQDELAQFGLCDNDVFARKVTDQWRKFM 300

Query: 301 KEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRS 360
           KEQI RARFYF  AE+GASQLDK SRWPVWSSL++YR IL+AIEENDY+N TKRAYVGR+
Sbjct: 301 KEQISRARFYFNLAEEGASQLDKDSRWPVWSSLLIYRNILDAIEENDYDNLTKRAYVGRA 360

Query: 361 KKLLTLPLAYTKAISAPSLL 379
           KKLL LP+AYTK++  PSL+
Sbjct: 361 KKLLMLPMAYTKSLHTPSLI 378

[Close]
BLAST of Cp4.1LG16g09330 vs. NCBI nr
Match: gi|645215095|ref|XP_008238794.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Prunus mume])

HSP 1 Score: 544.7 bits (1402), Expect = 1.3e-151
Identity = 271/382 (70.94%), Postives = 311/382 (81.41%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGECKG--KRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M S+ SL    +  IGE  G  +  +  V  +R  VI  P       FP LS QGIP+AD
Sbjct: 1   MRSTFSLAA--KTYIGESNGNFRHRKSMVTATRAEVITVPKQRSRPVFPELSIQGIPIAD 60

Query: 61  LHVDEIVARQSRANHSSQP--YKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKE 120
           LHV EIV RQS+     +    +     PSFLEEAYE CR ICAEYA+TFYLGTLLMT+E
Sbjct: 61  LHVQEIVQRQSQTYSMDKEGGRRKPQFCPSFLEEAYERCRNICAEYAKTFYLGTLLMTEE 120

Query: 121 RQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVS 180
           RQ+AIWAIYVWCRRTDELVDGPN+ YM+ EVLDRWEERLQDIFEG PYD+LDAAL+HTV 
Sbjct: 121 RQKAIWAIYVWCRRTDELVDGPNSVYMSSEVLDRWEERLQDIFEGRPYDMLDAALTHTVF 180

Query: 181 KFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSS 240
            FPLD+KPF+DMIEGMRMDTRKCRY +F+ELYLYCYYVAGTVGLMSVPVMGIAPDS +S+
Sbjct: 181 SFPLDIKPFRDMIEGMRMDTRKCRYQNFQELYLYCYYVAGTVGLMSVPVMGIAPDSLISA 240

Query: 241 QTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWRE 300
           Q+ Y A+L+LGIGNQLTNILRDVGEDA+RGRVYLPQDELAQFGL DND+ S +VTD+WRE
Sbjct: 241 QSTYDAALYLGIGNQLTNILRDVGEDAMRGRVYLPQDELAQFGLGDNDVFSRKVTDQWRE 300

Query: 301 FMKEQIKRARFYFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVG 360
           FMKEQI RARFYF  AE+GASQLDK SRWPVWSSL++YR IL+AIE+NDY+N TKRAYV 
Sbjct: 301 FMKEQITRARFYFNLAEEGASQLDKASRWPVWSSLLIYRNILDAIEDNDYDNLTKRAYVR 360

Query: 361 RSKKLLTLPLAYTKAISAPSLL 379
           R+KKLL LPLAY++++S  SLL
Sbjct: 361 RAKKLLMLPLAYSRSLSTSSLL 380

[Close]
BLAST of Cp4.1LG16g09330 vs. NCBI nr
Match: gi|694315409|ref|XP_009375533.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 541.2 bits (1393), Expect = 1.5e-150
Identity = 263/371 (70.89%), Postives = 307/371 (82.75%), Query Frame = 1 

Query: 12  RIVIGECKGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVARQS 71
           R  IGE  G+  R +  V  ++  +I AP       FP LS QGIPLADLHV EIV RQS
Sbjct: 10  RTYIGESNGRIPRQKSMVTAAKAQLITAPKQRSRPVFPELSIQGIPLADLHVREIVQRQS 69

Query: 72  --RANHSSQPYKTLHLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVW 131
             R+            +PSFLEEAYE C+ +CAEYA+TFYLGTLLMT+ERQ+AIWAIYVW
Sbjct: 70  QTRSVDGEGGRHRPQFNPSFLEEAYERCKNLCAEYAKTFYLGTLLMTEERQKAIWAIYVW 129

Query: 132 CRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKD 191
           CRRTDELVDGPN+ YM+ EVLDRWE+RL+DIFEG PYD+LDAAL+HTV  FPLD+KPF+D
Sbjct: 130 CRRTDELVDGPNSGYMSSEVLDRWEQRLEDIFEGRPYDMLDAALTHTVFNFPLDIKPFRD 189

Query: 192 MIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLG 251
           MI+GMRMDT+KCRY +F+ELYLYCYYVAGTVGLMSVPVMGIAPDS +S+Q+ Y ++L+LG
Sbjct: 190 MIDGMRMDTQKCRYQNFQELYLYCYYVAGTVGLMSVPVMGIAPDSRISAQSTYDSALYLG 249

Query: 252 IGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDNDILSMRVTDKWREFMKEQIKRARF 311
           IGNQLTNILRDVGEDA+RGRVYLPQDELAQFGLCDND+ S +VTD WR FMKEQI RARF
Sbjct: 250 IGNQLTNILRDVGEDAMRGRVYLPQDELAQFGLCDNDVFSRKVTDPWRAFMKEQITRARF 309

Query: 312 YFKQAEKGASQLDKPSRWPVWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLA 371
           YF  AE+GASQLDK SRWPVWSSL++YR IL+AIEENDY+N TKRAYV R+KKLL LPLA
Sbjct: 310 YFNLAEEGASQLDKASRWPVWSSLLIYRNILDAIEENDYDNLTKRAYVKRAKKLLMLPLA 369

Query: 372 YTKAISAPSLL 379
           YT+++S  +L+
Sbjct: 370 YTRSLSTHNLM 380

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g09330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSY1_SOLLC8.0e-12559.52Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2[more]
PSY_CAPAN1.2e-12361.92Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 ... [more]
PSY_CUCME1.5e-12370.21Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1[more]
PSY_MAIZE5.8e-12369.42Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1[more]
PSY_NARPS7.5e-12360.92Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1[more]
BLAST of Cp4.1LG16g09330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ43_CUCSA7.5e-17879.48Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280510 PE=4 SV=1[more]
F8U9A7_CUCME1.7e-17780.52Phytoene synthase OS=Cucumis melo GN=PSY2 PE=4 SV=1[more]
A0A0K1L5A0_MALDO1.3e-15069.11Phytoene synthase OS=Malus domestica GN=PSY4 PE=2 SV=1[more]
A0A097F715_9ROSA1.7e-15069.37Phytoene synthase 3 OS=Eriobotrya japonica GN=PSY3 PE=4 SV=1[more]
B9GLH2_POPTR1.7e-15070.79Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s04490g PE=4 SV=2[more]
BLAST of Cp4.1LG16g09330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17230.38.3e-12065.89 PHYTOENE SYNTHASE[more]
BLAST of Cp4.1LG16g09330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448822|ref|XP_004142164.1|1.1e-17779.48PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus][more]
gi|659097776|ref|XP_008449808.1|2.4e-17780.52PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo][more]
gi|470120189|ref|XP_004296190.1|7.5e-15571.32PREDICTED: phytoene synthase 2, chloroplastic-like [Fragaria vesca subsp. vesca][more]
gi|645215095|ref|XP_008238794.1|1.3e-15170.94PREDICTED: phytoene synthase 2, chloroplastic-like [Prunus mume][more]
gi|694315409|ref|XP_009375533.1|1.5e-15070.89PREDICTED: phytoene synthase 2, chloroplastic-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR019845Squalene/phytoene_synthase_CS
IPR008949Isoprenoid_synthase_dom_sf
IPR002060Squ/phyt_synthse
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
biological_process GO:0006696 ergosterol biosynthetic process
cellular_component GO:0009536 plastid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0016740 transferase activity
molecular_function GO:0004310 farnesyl-diphosphate farnesyltransferase activity
molecular_function GO:0051996 squalene synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g09330.1Cp4.1LG16g09330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 102..357
score: 2.6
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 86..372
score: 2.9E
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 91..372
score: 8.92
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01044SQUALEN_PHYTOEN_SYN_1coord: 210..225
scor
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01045SQUALEN_PHYTOEN_SYN_2coord: 246..271
scor
NoneNo IPR availablePANTHERPTHR31480FAMILY NOT NAMEDcoord: 49..379
score: 2.2E
NoneNo IPR availablePANTHERPTHR31480:SF9SUBFAMILY NOT NAMEDcoord: 49..379
score: 2.2E