CmaCh20G000310 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G000310
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPhytoene synthase
LocationCma_Chr20 : 140674 .. 142255 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAATCTTTTTTCTCAAATAATCTGTACTATGACTTCTTCTATTTCCCTTACACCAAACCCTCGTATAGTCATTGGAGACTGCGAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCAACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGAAAGGCAATCTCGGGCCAACCATTCTTCCCAACCGTGTAAGACGCTGCAGTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGGTAAGGGGAAAAGAAATCACATTTTTTAAGCGAACCCATTTCGGAAAACCCACCAAAGTGAGGAGTATGTTTTGAGTTTTTGTTGGTGCAGTTTGGTGTAGGAGAACAGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGGTGCAGTGAGCTGAGAGAAGCTTTCCTGTTTTTTATGTCTTGCTGGCTTGGGCTCAATACTTGTTGTGCGTGTTTGTTTTGTTTTCTGAAAGCAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACCAGAAAGTGTCGATATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAGCTTACCAATATTCTAAGAGATGTGGGAGAGGAGTAAGCTATTCTTTTCTTTCTCTATCTCTTACTTCTATTGTTCATGCAACTAAATATTGCGTTTTGAACTTGTTTCAGTGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGAGTTATGTGACAACGATATATTGTCGATGAGAGTGACTGATAAATGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGCCCAGCCGTTGGCCGATATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATAGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCATTCACTGACTGCACATCCAGCAACTTAGGCACTTAGGCATGCGTTGCCGCATCCAAACAGATTACAAAACATTTCTCCCAATGGTTTATGAGGAAATTTAAGTTCGAATTCTAAAAAGATCCAAAATTCCTCCCATTATTGGTTACTTACACA

mRNA sequence

CCCAATCTTTTTTCTCAAATAATCTGTACTATGACTTCTTCTATTTCCCTTACACCAAACCCTCGTATAGTCATTGGAGACTGCGAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCAACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGAAAGGCAATCTCGGGCCAACCATTCTTCCCAACCGTGTAAGACGCTGCAGTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGTTTGGTGTAGGAGAACAGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACCAGAAAGTGTCGATATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAGCTTACCAATATTCTAAGAGATGTGGGAGAGGATGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGAGTTATGTGACAACGATATATTGTCGATGAGAGTGACTGATAAATGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGCCCAGCCGTTGGCCGATATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATAGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCATTCACTGACTGCACATCCAGCAACTTAGGCACTTAGGCATGCGTTGCCGCATCCAAACAGATTACAAAACATTTCTCCCAATGGTTTATGAGGAAATTTAAGTTCGAATTCTAAAAAGATCCAAAATTCCTCCCATTATTGGTTACTTACACA

Coding sequence (CDS)

ATGACTTCTTCTATTTCCCTTACACCAAACCCTCGTATAGTCATTGGAGACTGCGAAGGGAAGCGATCCAGAGTTAGAGTTATAATGAGCAGAGGTGGGGTAATTGCAGCCCCCACAAGCCCCCAGACATTGAAGTTTCCAACTTTGTCCAAACAAGGCATTCCTTTGGCCGATTTGCACGTCGATGAGATCGTTGAAAGGCAATCTCGGGCCAACCATTCTTCCCAACCGTGTAAGACGCTGCAGTTACATCCTTCATTTCTGGAAGAAGCTTACGAGAGTTGCAGGAAAATCTGCGCAGAATATGCCCAGACCTTCTACTTGGGAACTTTACTGATGACGAAGGAGAGGCAGAGAGCAATTTGGGCAATATATGTTTGGTGTAGGAGAACAGATGAACTTGTGGACGGCCCCAATGCTGCATACATGAACCCAGAAGTTCTTGACCGATGGGAAGAACGTTTGCAAGACATATTTGAAGGGTGCCCTTATGACGTGCTGGACGCTGCTTTGAGTCACACGGTGTCCAAATTTCCCTTAGACATGAAGCCTTTCAAAGACATGATTGAGGGCATGAGAATGGACACCAGAAAGTGTCGATATGACAGTTTTGAAGAGCTGTATTTGTATTGTTACTACGTGGCTGGAACTGTGGGCCTAATGAGTGTGCCTGTTATGGGAATTGCACCCGATTCTTCGCTTTCTTCTCAAACTATTTACACTGCTTCCCTCCACTTGGGAATTGGAAATCAGCTTACCAATATTCTAAGAGATGTGGGAGAGGATGCTTTGAGAGGGAGGGTATATCTTCCTCAAGATGAGCTTGCACAGTTCGAGTTATGTGACAACGATATATTGTCGATGAGAGTGACTGATAAATGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTTTATTTCAAACAGGCAGAAAAGGGAGCCTCTCAGCTAGACAAGCCCAGCCGTTGGCCGATATGGTCGTCCTTGATGCTGTACCGAAAAATATTGGAAGCAATAGAAGAAAACGATTACAACAACTTCACAAAGCGAGCTTACGTAGGGAGGTCGAAGAAACTTCTCACACTGCCTCTTGCTTACACCAAAGCTATATCGGCACCCAGTCTACTCATTCACTGA

Protein sequence

MTSSISLTPNPRIVIGDCEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPSLLIH
Homology
[Close]
BLAST of CmaCh20G000310 vs. Swiss-Prot
Match: PSY1_SOLLC (Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2)

HSP 1 Score: 444.9 bits (1143), Expect = 8.9e-124
Identity = 222/374 (59.36%), Postives = 282/374 (75.40%), Query Frame = 1 

Query: 6   SLTPNPRIVIGDCEGKRSRV-RVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEI 65
           +L  N RI  G   GK++   R    R  ++A P+  +T+     S+Q +    L    +
Sbjct: 38  NLVSNERINRGG--GKQTNNGRKFSVRSAILATPSGERTMT----SEQMVYDVVLRQAAL 97

Query: 66  VERQSRANHSSQ--PCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIW 125
           V+RQ R+ +  +  P   +  +   L EAY+ C ++CAEYA+TF LGT+LMT ER+RAIW
Sbjct: 98  VKRQLRSTNELEVKPDIPIPGNLGLLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIW 157

Query: 126 AIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDM 185
           AIYVWCRRTDELVDGPNA+Y+ P  LDRWE RL+D+F G P+D+LD ALS TVS FP+D+
Sbjct: 158 AIYVWCRRTDELVDGPNASYITPAALDRWENRLEDVFNGRPFDMLDGALSDTVSNFPVDI 217

Query: 186 KPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTA 245
           +PF+DMIEGMRMD RK RY +F+ELYLYCYYVAGTVGLMSVP+MGIAP+S  +++++Y A
Sbjct: 218 QPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNA 277

Query: 246 SLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKEQI 305
           +L LGI NQLTNILRDVGEDA RGRVYLPQDELAQ  L D DI + RVTDKWR FMK+QI
Sbjct: 278 ALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQI 337

Query: 306 KRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLL 365
            RAR +F +AEKG ++L   SR+P+W+SL+LYRKIL+ IE NDYNNFTKRAYV +SKKL+
Sbjct: 338 HRARKFFDEAEKGVTELSSASRFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSKKLI 397

Query: 366 TLPLAYTKAISAPS 377
            LP+AY K++  P+
Sbjct: 398 ALPIAYAKSLVPPT 405

[Close]
BLAST of CmaCh20G000310 vs. Swiss-Prot
Match: PSY_CAPAN (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 PE=1 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 9.8e-123
Identity = 211/344 (61.34%), Postives = 269/344 (78.20%), Query Frame = 1 

Query: 31  RGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVERQSRANHSSQPCKTLQLHPSF--L 90
           R  ++A P    T+     S++ +    L    +V+RQ R+       K + +  +   L
Sbjct: 74  RSAIVATPAGEMTMS----SERMVYDVVLRQAALVKRQLRSTDELDVKKDIPIPGTLGLL 133

Query: 91  EEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVL 150
            EAY+ C ++CAEYA+TFYLGT+LMT ER++AIWAIYVWCRRTDELVDGPNA+++ P  L
Sbjct: 134 SEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPAAL 193

Query: 151 DRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELY 210
           DRWE+RL+D+F G P+D+LDAALS TVSKFP+D++PF+DMIEGMRMD RK RY +F+ELY
Sbjct: 194 DRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFDELY 253

Query: 211 LYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGRV 270
           LYCYYVAGTVGLMSVP+MGIAP+S  +++++Y A+L LGI NQLTNILRDVGEDA RGRV
Sbjct: 254 LYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRV 313

Query: 271 YLPQDELAQFELCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSRWPIW 330
           YLPQDELAQ  L D DI + RVTDKWR FMK+QI+RAR +F +AEKG ++L   SRWP+ 
Sbjct: 314 YLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEAEKGVTELSAASRWPVL 373

Query: 331 SSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAI 373
           +SL+LYR+IL+ IE NDYNNFTKRAYV + KKL+ LP+AY K++
Sbjct: 374 ASLLLYRRILDEIEANDYNNFTKRAYVSKPKKLIALPIAYAKSL 413

[Close]
BLAST of CmaCh20G000310 vs. Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.9e-122
Identity = 203/292 (69.52%), Postives = 249/292 (85.27%), Query Frame = 1 

Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNP 145
           S L EAY+ C ++CAEYA+TFYLGT+LMT ERQ+AIWAIYVWCRRTDELVDGPNA+++ P
Sbjct: 131 SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 190

Query: 146 EVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFE 205
             LDRWE RL+++F+G P+D+LDAAL+ TV+KFP+D++PFKDMIEGMRMD RK RY +F+
Sbjct: 191 TALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFD 250

Query: 206 ELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQL-TNILRDVGEDAL 265
           ELYLYCYYVAGTVGLMSVPVMGIAP+S  S++++Y A+L LGI NQ   NILRDVGEDA 
Sbjct: 251 ELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDAR 310

Query: 266 RGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSR 325
           RGR+YLPQDELAQ  L D DI + RVTDKWR FMK QIKRAR +F +AEKG  +L+K SR
Sbjct: 311 RGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASR 370

Query: 326 WPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAPS 377
           WP+W+SL+LYR+IL+ IE NDY+NFTKRAYV ++KK+L LP+AY +A+  PS
Sbjct: 371 WPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGPS 422

[Close]
BLAST of CmaCh20G000310 vs. Swiss-Prot
Match: PSY_MAIZE (Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 6.4e-122
Identity = 203/315 (64.44%), Postives = 259/315 (82.22%), Query Frame = 1 

Query: 64  IVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWA 123
           +++RQ R        + + +  + L+EAY+ C +IC EYA+TFYLGT+LMT+ER+RAIWA
Sbjct: 91  LLKRQLRTPVLDARPQDMDMPRNGLKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWA 150

Query: 124 IYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMK 183
           IYVWCRRTDELVDGPNA Y+ P  LDRWE+RL+D+F G PYD+LDAALS T+S+FP+D++
Sbjct: 151 IYVWCRRTDELVDGPNANYITPTALDRWEKRLEDLFTGRPYDMLDAALSDTISRFPIDIQ 210

Query: 184 PFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTAS 243
           PF+DMIEGMR D RK RY++F+ELY+YCYYVAGTVGLMSVPVMGIA +S  +++++Y+A+
Sbjct: 211 PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAA 270

Query: 244 LHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKEQIK 303
           L LGI NQLTNILRDVGEDA RGR+YLPQDELAQ  L D DI    VT++WR FMK QIK
Sbjct: 271 LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 330

Query: 304 RARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLT 363
           RAR +F++AE+G ++L + SRWP+W+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KKLL 
Sbjct: 331 RARMFFEEAERGVNELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLA 390

Query: 364 LPLAYTKAISAPSLL 379
           LP+AY K++  P  L
Sbjct: 391 LPVAYGKSLLLPCSL 405

[Close]
BLAST of CmaCh20G000310 vs. Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 8.3e-122
Identity = 210/348 (60.34%), Postives = 268/348 (77.01%), Query Frame = 1 

Query: 31  RGGVIAAPTSPQTLKFPTLSKQGIPLADLHVDEIVERQSRANHSSQPCKTLQLHPS---F 90
           R  ++A P    T+     S+Q +    L    +V+ Q++++  S   K   + P     
Sbjct: 69  RSSLVANPAGEATIS----SEQKVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTVYL 128

Query: 91  LEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYVWCRRTDELVDGPNAAYMNPEV 150
           L++AY+ C ++CAEYA+TFYLGTLLMT ER+RAIWAIYVWCRRTDELVDG NA+++ P  
Sbjct: 129 LKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSA 188

Query: 151 LDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEEL 210
           LDRWE RL+D+F G PYD+ DAALS TVS+FP+D++PF DM+EGMRMD +K RY +F+EL
Sbjct: 189 LDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDEL 248

Query: 211 YLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGNQLTNILRDVGEDALRGR 270
           YLYCYYVAGTVGLMSVPVMGIAP+S   ++++Y A+L LGI NQLTNILRDVGEDA RGR
Sbjct: 249 YLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDARRGR 308

Query: 271 VYLPQDELAQFELCDNDILSMRVTDKWREFMKEQIKRARFYFKQAEKGASQLDKPSRWPI 330
           +YLPQDELA+  L D D+ + +VTDKWR FMK QIKRAR +F+QAEKG ++L + SRWP+
Sbjct: 309 IYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASRWPV 368

Query: 331 WSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTKAISAP 376
           W+SL+LYR+IL+ IE NDYNNFTKRAYV + K+L  LPLAY K++  P
Sbjct: 369 WASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAYGKSLLIP 412

[Close]
BLAST of CmaCh20G000310 vs. TrEMBL
Match: A0A0A0KZ43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280510 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 8.2e-177
Identity = 304/385 (78.96%), Postives = 341/385 (88.57%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP P + IG+C+GK    R ++I + GGV AAP S +TLKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 61  LHVDEIVERQSRANH--SSQPCKT-LQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIVERQS  NH    + CK  ++   SFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEGCKRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEGCPYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWR 300
           + T+Y+A+LHLGIGNQLTNILRDVGEDA+RGRVYLPQDEL QF LCD DIL MRV+D+WR
Sbjct: 241 THTVYSAALHLGIGNQLTNILRDVGEDAMRGRVYLPQDELTQFGLCDEDILRMRVSDEWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWP+WSSLMLYR+ILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYREILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLIH 381
           GRSKK L LPLAYTK+IS P+L+ +
Sbjct: 361 GRSKKFLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of CmaCh20G000310 vs. TrEMBL
Match: F8U9A7_CUCME (Phytoene synthase OS=Cucumis melo GN=PSY2 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 7.0e-176
Identity = 307/385 (79.74%), Postives = 339/385 (88.05%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP     IG+C+G     R + I + GG+IAAP S +TLK  TLSKQGIPL  
Sbjct: 1   MSSCVFVTPKSLTFIGECKGNVFPKRFKTIRNGGGIIAAPRSSETLKLQTLSKQGIPLDH 60

Query: 61  LHVDEIVERQSRANH--SSQPCKT-LQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIVERQS  NH    + CK  ++  PSFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEWCKKKMKFQPSFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEG PYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGRPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWR 300
           + TIY+A+LHLGIGNQLTNILRDVGEDA RGRVYLPQDELAQF LCD DIL MRV+DKWR
Sbjct: 241 THTIYSAALHLGIGNQLTNILRDVGEDATRGRVYLPQDELAQFGLCDADILRMRVSDKWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWP+WSSLMLYRKILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLIH 381
           GRSKKLL LPLAYTK+IS P+L+ +
Sbjct: 361 GRSKKLLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of CmaCh20G000310 vs. TrEMBL
Match: B9GLH2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s04490g PE=4 SV=2)

HSP 1 Score: 543.5 bits (1399), Expect = 2.0e-151
Identity = 268/381 (70.34%), Postives = 312/381 (81.89%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           M S+ SL+  P     + +   S+  V  +R  VIAAP       FP L K GIP  DL 
Sbjct: 1   MCSTFSLSAKPCTGADNGKFLHSKSLVTRARAEVIAAPKRSSQRAFPRLLKHGIPHTDLQ 60

Query: 61  VDEIVERQSRANHSSQP--CKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQ 120
           V EIVERQS+AN  S+   C+  + HP+FLEEAYE CR ICAEYA+TFYLGT LMT+ERQ
Sbjct: 61  VHEIVERQSQANSLSKQDICRKPEFHPAFLEEAYERCRNICAEYAKTFYLGTRLMTEERQ 120

Query: 121 RAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKF 180
           +A WAIYVWCRRTDELVDGPNA  M+  VLDRWEERLQDIF+G PYD+LDAAL+ T+SKF
Sbjct: 121 KATWAIYVWCRRTDELVDGPNAVLMSTAVLDRWEERLQDIFDGRPYDMLDAALTDTISKF 180

Query: 181 PLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQT 240
           PLD+KPF+DMIEGMRMDTRK RYD+F+ELYLYCYYVAGTVGLMSVPVMGIA +S  S+Q+
Sbjct: 181 PLDIKPFRDMIEGMRMDTRKFRYDNFQELYLYCYYVAGTVGLMSVPVMGIAAESEASAQS 240

Query: 241 IYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFM 300
           IY A+L+LGIGNQLTNILRDVGEDALRGRVYLPQDELAQF LCD D+ + +VTD WREFM
Sbjct: 241 IYNAALYLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDQDVFARKVTDGWREFM 300

Query: 301 KEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRS 360
           KEQI RARFYF  AE+GAS+L+K SRWP+WSSL++Y+KIL+AIE+NDY+NFTKRAYVGR+
Sbjct: 301 KEQIIRARFYFNLAEEGASKLEKASRWPVWSSLLVYQKILDAIEDNDYDNFTKRAYVGRT 360

Query: 361 KKLLTLPLAYTKAISAPSLLI 380
           KKLLTLPLAYTKA S   L++
Sbjct: 361 KKLLTLPLAYTKAQSMSRLIL 381

[Close]
BLAST of CmaCh20G000310 vs. TrEMBL
Match: B9SM48_RICCO (Phytoene synthase, chloroplast, putative OS=Ricinus communis GN=RCOM_0878400 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 5.0e-150
Identity = 263/382 (68.85%), Postives = 311/382 (81.41%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           M+S+ SL   P I   D +   ++  V  ++  VI AP    T  FP L  Q I   D+H
Sbjct: 1   MSSTFSLAAKPCIKGNDSKFLHAKSVVTRAKAQVITAPKQSDTSAFPQLLTQRILHTDIH 60

Query: 61  VDEIVERQSRAN---HSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKER 120
           V +IVERQS+A+       PC+  + HP FLEEAY  C+ ICAEYA+TFYLGTLLMT+ER
Sbjct: 61  VRQIVERQSQADCLLAQQDPCRKPEFHPLFLEEAYARCKNICAEYAKTFYLGTLLMTEER 120

Query: 121 QRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSK 180
           Q+AIWAIYVWCRRTDELVDGPNA YM+  VLDRWEERLQ+IF+G PYD+LDAAL+ TV +
Sbjct: 121 QKAIWAIYVWCRRTDELVDGPNAGYMSSAVLDRWEERLQNIFDGQPYDMLDAALTDTVFR 180

Query: 181 FPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQ 240
           FPLD+KPF DMIEGMRMDT+KCRY+ FEELY YCYYVAGTVGLMSVPVMGIAP++ +S+Q
Sbjct: 181 FPLDIKPFMDMIEGMRMDTKKCRYEDFEELYRYCYYVAGTVGLMSVPVMGIAPEACVSAQ 240

Query: 241 TIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREF 300
           TIY+A+L+LGIGNQLTNILRDVGEDA+RGRVYLPQDELAQF L D D+   +VTD+WREF
Sbjct: 241 TIYSAALNLGIGNQLTNILRDVGEDAMRGRVYLPQDELAQFGLRDEDVFGGKVTDRWREF 300

Query: 301 MKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGR 360
           MKEQI RAR+YF  AE+GASQLDK SRWP+WS L+LYR+IL+AIE+NDY+N TKRAYVGR
Sbjct: 301 MKEQITRARYYFNLAEEGASQLDKASRWPVWSCLILYREILDAIEDNDYDNLTKRAYVGR 360

Query: 361 SKKLLTLPLAYTKAISAPSLLI 380
           +KKLLTLPLAYTKA S PSL++
Sbjct: 361 TKKLLTLPLAYTKAQSPPSLIL 382

[Close]
BLAST of CmaCh20G000310 vs. TrEMBL
Match: A0A0K1L5A0_MALDO (Phytoene synthase OS=Malus domestica GN=PSY4 PE=2 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 6.6e-150
Identity = 262/382 (68.59%), Postives = 317/382 (82.98%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGK-RSRVRVIMS-RGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M S+IS     +  IG+  G+ R R+ ++ + +  VI AP       FP LS QG PLAD
Sbjct: 1   MCSTISFAG--KTYIGESNGRIRRRISMVTAAKAQVITAPKQRSRPVFPELSIQGFPLAD 60

Query: 61  LHVDEIVERQS--RANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKE 120
           LHV EIV+RQS  R+       +  Q +PSFLEEAYE C+ +CAEYA+TFYLGTLLMT+E
Sbjct: 61  LHVQEIVQRQSQTRSVDGEGGRRRPQFNPSFLEEAYERCKNLCAEYAKTFYLGTLLMTEE 120

Query: 121 RQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVS 180
           RQ+AIWAIYVWCRRTDELVDGPN+ YM+ EVLDRWE+RL+D+FEG PYD+LDAAL+HTV 
Sbjct: 121 RQKAIWAIYVWCRRTDELVDGPNSDYMSSEVLDRWEQRLEDVFEGRPYDMLDAALTHTVF 180

Query: 181 KFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSS 240
            FPLD+KPF+DMIEGMRMDT+KCRY +F+ELYLYCYYVAGTVGLMSVP+MGIAPDS +S+
Sbjct: 181 NFPLDIKPFRDMIEGMRMDTQKCRYHNFQELYLYCYYVAGTVGLMSVPIMGIAPDSRIST 240

Query: 241 QTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWRE 300
           Q+ Y ++L+LGIGNQLTNILRDVGEDA+RGRVYLPQDELAQF LCDND+ S +VTD+WR 
Sbjct: 241 QSTYDSALYLGIGNQLTNILRDVGEDAMRGRVYLPQDELAQFGLCDNDVFSRKVTDQWRA 300

Query: 301 FMKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVG 360
           FMK+QIKRARFYF  AE+GASQLDK SRWP+WSSL++YR IL+AIE+NDY+N TKRAYV 
Sbjct: 301 FMKKQIKRARFYFNVAEEGASQLDKASRWPVWSSLLIYRNILDAIEDNDYDNLTKRAYVK 360

Query: 361 RSKKLLTLPLAYTKAISAPSLL 379
           R+KKLL LPLAYT+++S  +L+
Sbjct: 361 RAKKLLMLPLAYTRSLSTHTLM 380

[Close]
BLAST of CmaCh20G000310 vs. TAIR10
Match: AT5G17230.3 (AT5G17230.3 PHYTOENE SYNTHASE)

HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-118
Identity = 197/302 (65.23%), Postives = 244/302 (80.79%), Query Frame = 1 

Query: 86  SFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRAIWAIYV---------------WCRR 145
           S L EAY+ C ++CAEYA+TFYLGTLLMT ER++AIWAIYV               WCRR
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRR 185

Query: 146 TDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPLDMKPFKDMIE 205
           TDELVDGPNA+++ P  LDRWE RL+D+F G P+D+LDAAL+ TV+++P+D++PF+DMIE
Sbjct: 186 TDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIE 245

Query: 206 GMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIYTASLHLGIGN 265
           GMRMD +K RY +F++LYLYCYYVAGTVGLMSVPVMGI P S  +++++Y A+L LGI N
Sbjct: 246 GMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIAN 305

Query: 266 QLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKEQIKRARFYFK 325
           QLTNILRDVGEDA RGRVYLPQDELAQ  L D DI + +VTDKWR FMK Q+KRAR +F 
Sbjct: 306 QLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFD 365

Query: 326 QAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKKLLTLPLAYTK 373
           +AEKG ++L   SRWP+W+SL+LYR+IL+ IE NDYNNFTKRAYVG+ KK+  LPLAY K
Sbjct: 366 EAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 425

[Close]
BLAST of CmaCh20G000310 vs. NCBI nr
Match: gi|449448822|ref|XP_004142164.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 627.9 bits (1618), Expect = 1.2e-176
Identity = 304/385 (78.96%), Postives = 341/385 (88.57%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP P + IG+C+GK    R ++I + GGV AAP S +TLKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 61  LHVDEIVERQSRANH--SSQPCKT-LQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIVERQS  NH    + CK  ++   SFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEGCKRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEGCPYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWR 300
           + T+Y+A+LHLGIGNQLTNILRDVGEDA+RGRVYLPQDEL QF LCD DIL MRV+D+WR
Sbjct: 241 THTVYSAALHLGIGNQLTNILRDVGEDAMRGRVYLPQDELTQFGLCDEDILRMRVSDEWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWP+WSSLMLYR+ILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYREILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLIH 381
           GRSKK L LPLAYTK+IS P+L+ +
Sbjct: 361 GRSKKFLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of CmaCh20G000310 vs. NCBI nr
Match: gi|659097776|ref|XP_008449808.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 624.8 bits (1610), Expect = 1.0e-175
Identity = 307/385 (79.74%), Postives = 339/385 (88.05%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M+S + +TP     IG+C+G     R + I + GG+IAAP S +TLK  TLSKQGIPL  
Sbjct: 1   MSSCVFVTPKSLTFIGECKGNVFPKRFKTIRNGGGIIAAPRSSETLKLQTLSKQGIPLDH 60

Query: 61  LHVDEIVERQSRANH--SSQPCKT-LQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTK 120
           L V+EIVERQS  NH    + CK  ++  PSFLEEAYESCRKICAEYA+TFYLGTLLMTK
Sbjct: 61  LKVEEIVERQSEGNHFLREEWCKKKMKFQPSFLEEAYESCRKICAEYAKTFYLGTLLMTK 120

Query: 121 ERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTV 180
           ERQRAIWAIYVWCRRTDELVDGPNA YMNP+VLDRWEERL+DIFEG PYD+LDAALSHTV
Sbjct: 121 ERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGRPYDLLDAALSHTV 180

Query: 181 SKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240
           SKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS
Sbjct: 181 SKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLS 240

Query: 241 SQTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWR 300
           + TIY+A+LHLGIGNQLTNILRDVGEDA RGRVYLPQDELAQF LCD DIL MRV+DKWR
Sbjct: 241 THTIYSAALHLGIGNQLTNILRDVGEDATRGRVYLPQDELAQFGLCDADILRMRVSDKWR 300

Query: 301 EFMKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYV 360
           EFMKEQIKRARFYFK AE+GASQLDK SRWP+WSSLMLYRKILEAIEENDYNNFTKRAYV
Sbjct: 301 EFMKEQIKRARFYFKLAEEGASQLDKASRWPVWSSLMLYRKILEAIEENDYNNFTKRAYV 360

Query: 361 GRSKKLLTLPLAYTKAISAPSLLIH 381
           GRSKKLL LPLAYTK+IS P+L+ +
Sbjct: 361 GRSKKLLALPLAYTKSISPPTLVFN 385

[Close]
BLAST of CmaCh20G000310 vs. NCBI nr
Match: gi|470120189|ref|XP_004296190.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 555.1 bits (1429), Expect = 9.7e-155
Identity = 268/378 (70.90%), Postives = 311/378 (82.28%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           M+S+ SL P P I   +      +  +   R  VI AP    T  FP LS QGIP+ADLH
Sbjct: 1   MSSTFSLAPKPYIRESNGNLLPPKSMLTTIRAEVITAPKQRNTRSFPELSIQGIPVADLH 60

Query: 61  VDEIVERQSRANHSSQPCKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQRA 120
           V EIV+RQS++       +  Q  PSFLEEAY+ CR ICAEYA+TFYLGTLLMT+ERQ+A
Sbjct: 61  VQEIVQRQSKSIAKVGTSRKSQFDPSFLEEAYQRCRNICAEYAKTFYLGTLLMTEERQKA 120

Query: 121 IWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKFPL 180
           IWAIYVWCRRTDELVDGPN+ +MN EVLD WEERL+DIFEG PYD+LDAAL+HTV  FPL
Sbjct: 121 IWAIYVWCRRTDELVDGPNSGHMNSEVLDSWEERLEDIFEGRPYDMLDAALTHTVLSFPL 180

Query: 181 DMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQTIY 240
           D+KPF+DMIEGMRMDTRKCRY +F+ELYLYCYYVAGTVGLMSVPVMGIAPDS  S+Q+ Y
Sbjct: 181 DIKPFRDMIEGMRMDTRKCRYQNFQELYLYCYYVAGTVGLMSVPVMGIAPDSLNSTQSTY 240

Query: 241 TASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFMKE 300
            A+L+LGIGNQLTNILRDVGEDA RGRVYLPQDELAQF LCDND+ + +VTD+WR+FMKE
Sbjct: 241 DAALYLGIGNQLTNILRDVGEDAARGRVYLPQDELAQFGLCDNDVFARKVTDQWRKFMKE 300

Query: 301 QIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRSKK 360
           QI RARFYF  AE+GASQLDK SRWP+WSSL++YR IL+AIEENDY+N TKRAYVGR+KK
Sbjct: 301 QISRARFYFNLAEEGASQLDKDSRWPVWSSLLIYRNILDAIEENDYDNLTKRAYVGRAKK 360

Query: 361 LLTLPLAYTKAISAPSLL 379
           LL LP+AYTK++  PSL+
Sbjct: 361 LLMLPMAYTKSLHTPSLI 378

[Close]
BLAST of CmaCh20G000310 vs. NCBI nr
Match: gi|566147192|ref|XP_002297643.2| (hypothetical protein POPTR_0001s04490g [Populus trichocarpa])

HSP 1 Score: 543.5 bits (1399), Expect = 2.9e-151
Identity = 268/381 (70.34%), Postives = 312/381 (81.89%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEGKRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLADLH 60
           M S+ SL+  P     + +   S+  V  +R  VIAAP       FP L K GIP  DL 
Sbjct: 1   MCSTFSLSAKPCTGADNGKFLHSKSLVTRARAEVIAAPKRSSQRAFPRLLKHGIPHTDLQ 60

Query: 61  VDEIVERQSRANHSSQP--CKTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKERQ 120
           V EIVERQS+AN  S+   C+  + HP+FLEEAYE CR ICAEYA+TFYLGT LMT+ERQ
Sbjct: 61  VHEIVERQSQANSLSKQDICRKPEFHPAFLEEAYERCRNICAEYAKTFYLGTRLMTEERQ 120

Query: 121 RAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVSKF 180
           +A WAIYVWCRRTDELVDGPNA  M+  VLDRWEERLQDIF+G PYD+LDAAL+ T+SKF
Sbjct: 121 KATWAIYVWCRRTDELVDGPNAVLMSTAVLDRWEERLQDIFDGRPYDMLDAALTDTISKF 180

Query: 181 PLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSSQT 240
           PLD+KPF+DMIEGMRMDTRK RYD+F+ELYLYCYYVAGTVGLMSVPVMGIA +S  S+Q+
Sbjct: 181 PLDIKPFRDMIEGMRMDTRKFRYDNFQELYLYCYYVAGTVGLMSVPVMGIAAESEASAQS 240

Query: 241 IYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWREFM 300
           IY A+L+LGIGNQLTNILRDVGEDALRGRVYLPQDELAQF LCD D+ + +VTD WREFM
Sbjct: 241 IYNAALYLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCDQDVFARKVTDGWREFM 300

Query: 301 KEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVGRS 360
           KEQI RARFYF  AE+GAS+L+K SRWP+WSSL++Y+KIL+AIE+NDY+NFTKRAYVGR+
Sbjct: 301 KEQIIRARFYFNLAEEGASKLEKASRWPVWSSLLVYQKILDAIEDNDYDNFTKRAYVGRT 360

Query: 361 KKLLTLPLAYTKAISAPSLLI 380
           KKLLTLPLAYTKA S   L++
Sbjct: 361 KKLLTLPLAYTKAQSMSRLIL 381

[Close]
BLAST of CmaCh20G000310 vs. NCBI nr
Match: gi|645215095|ref|XP_008238794.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Prunus mume])

HSP 1 Score: 542.3 bits (1396), Expect = 6.5e-151
Identity = 269/382 (70.42%), Postives = 312/382 (81.68%), Query Frame = 1 

Query: 1   MTSSISLTPNPRIVIGDCEG--KRSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60
           M S+ SL    +  IG+  G  +  +  V  +R  VI  P       FP LS QGIP+AD
Sbjct: 1   MRSTFSLAA--KTYIGESNGNFRHRKSMVTATRAEVITVPKQRSRPVFPELSIQGIPIAD 60

Query: 61  LHVDEIVERQSRANHSSQPC--KTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMTKE 120
           LHV EIV+RQS+     +    +  Q  PSFLEEAYE CR ICAEYA+TFYLGTLLMT+E
Sbjct: 61  LHVQEIVQRQSQTYSMDKEGGRRKPQFCPSFLEEAYERCRNICAEYAKTFYLGTLLMTEE 120

Query: 121 RQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHTVS 180
           RQ+AIWAIYVWCRRTDELVDGPN+ YM+ EVLDRWEERLQDIFEG PYD+LDAAL+HTV 
Sbjct: 121 RQKAIWAIYVWCRRTDELVDGPNSVYMSSEVLDRWEERLQDIFEGRPYDMLDAALTHTVF 180

Query: 181 KFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSLSS 240
            FPLD+KPF+DMIEGMRMDTRKCRY +F+ELYLYCYYVAGTVGLMSVPVMGIAPDS +S+
Sbjct: 181 SFPLDIKPFRDMIEGMRMDTRKCRYQNFQELYLYCYYVAGTVGLMSVPVMGIAPDSLISA 240

Query: 241 QTIYTASLHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFELCDNDILSMRVTDKWRE 300
           Q+ Y A+L+LGIGNQLTNILRDVGEDA+RGRVYLPQDELAQF L DND+ S +VTD+WRE
Sbjct: 241 QSTYDAALYLGIGNQLTNILRDVGEDAMRGRVYLPQDELAQFGLGDNDVFSRKVTDQWRE 300

Query: 301 FMKEQIKRARFYFKQAEKGASQLDKPSRWPIWSSLMLYRKILEAIEENDYNNFTKRAYVG 360
           FMKEQI RARFYF  AE+GASQLDK SRWP+WSSL++YR IL+AIE+NDY+N TKRAYV 
Sbjct: 301 FMKEQITRARFYFNLAEEGASQLDKASRWPVWSSLLIYRNILDAIEDNDYDNLTKRAYVR 360

Query: 361 RSKKLLTLPLAYTKAISAPSLL 379
           R+KKLL LPLAY++++S  SLL
Sbjct: 361 RAKKLLMLPLAYSRSLSTSSLL 380

The following BLAST results are available for this feature:
BLAST of CmaCh20G000310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSY1_SOLLC8.9e-12459.36Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2[more]
PSY_CAPAN9.8e-12361.34Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 ... [more]
PSY_CUCME2.9e-12269.52Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1[more]
PSY_MAIZE6.4e-12264.44Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1[more]
PSY_NARPS8.3e-12260.34Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1[more]
BLAST of CmaCh20G000310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ43_CUCSA8.2e-17778.96Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280510 PE=4 SV=1[more]
F8U9A7_CUCME7.0e-17679.74Phytoene synthase OS=Cucumis melo GN=PSY2 PE=4 SV=1[more]
B9GLH2_POPTR2.0e-15170.34Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s04490g PE=4 SV=2[more]
B9SM48_RICCO5.0e-15068.85Phytoene synthase, chloroplast, putative OS=Ricinus communis GN=RCOM_0878400 PE=... [more]
A0A0K1L5A0_MALDO6.6e-15068.59Phytoene synthase OS=Malus domestica GN=PSY4 PE=2 SV=1[more]
BLAST of CmaCh20G000310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17230.31.6e-11865.23 PHYTOENE SYNTHASE[more]
BLAST of CmaCh20G000310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448822|ref|XP_004142164.1|1.2e-17678.96PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus][more]
gi|659097776|ref|XP_008449808.1|1.0e-17579.74PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo][more]
gi|470120189|ref|XP_004296190.1|9.7e-15570.90PREDICTED: phytoene synthase 2, chloroplastic-like [Fragaria vesca subsp. vesca][more]
gi|566147192|ref|XP_002297643.2|2.9e-15170.34hypothetical protein POPTR_0001s04490g [Populus trichocarpa][more]
gi|645215095|ref|XP_008238794.1|6.5e-15170.42PREDICTED: phytoene synthase 2, chloroplastic-like [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002060Squ/phyt_synthse
IPR008949Isoprenoid_synthase_dom_sf
IPR019845Squalene/phytoene_synthase_CS
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
biological_process GO:0006696 ergosterol biosynthetic process
cellular_component GO:0009536 plastid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0016740 transferase activity
molecular_function GO:0004310 farnesyl-diphosphate farnesyltransferase activity
molecular_function GO:0051996 squalene synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G000310.1CmaCh20G000310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 102..357
score: 2.6
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 86..372
score: 2.0E
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 91..372
score: 6.19
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01044SQUALEN_PHYTOEN_SYN_1coord: 210..225
scor
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01045SQUALEN_PHYTOEN_SYN_2coord: 246..271
scor
NoneNo IPR availablePANTHERPTHR31480FAMILY NOT NAMEDcoord: 49..379
score: 3.9E
NoneNo IPR availablePANTHERPTHR31480:SF9SUBFAMILY NOT NAMEDcoord: 49..379
score: 3.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G000310Cucsa.153210Cucumber (Gy14) v1cgycmaB0423
CmaCh20G000310Cla003169Watermelon (97103) v1cmawmB531
CmaCh20G000310Csa4G280510Cucumber (Chinese Long) v2cmacuB549
CmaCh20G000310MELO3C014677Melon (DHL92) v3.5.1cmameB521
CmaCh20G000310ClCG02G023970Watermelon (Charleston Gray)cmawcgB489
CmaCh20G000310CSPI04G13030Wild cucumber (PI 183967)cmacpiB554
CmaCh20G000310CmoCh20G000340Cucurbita moschata (Rifu)cmacmoB550
CmaCh20G000310Lsi10G009710Bottle gourd (USVL1VR-Ls)cmalsiB500
CmaCh20G000310Cp4.1LG16g09330Cucurbita pepo (Zucchini)cmacpeB564
CmaCh20G000310MELO3C014677.2Melon (DHL92) v3.6.1cmamedB598
CmaCh20G000310CsaV3_4G023380Cucumber (Chinese Long) v3cmacucB0660
CmaCh20G000310Cla97C02G050140Watermelon (97103) v2cmawmbB577
CmaCh20G000310Bhi10G000345Wax gourdcmawgoB0693
CmaCh20G000310CsGy4G012590Cucumber (Gy14) v2cgybcmaB522
CmaCh20G000310Carg06947Silver-seed gourdcarcmaB0732
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G000310Silver-seed gourdcarcmaB1267
CmaCh20G000310Cucumber (Chinese Long) v3cmacucB0647
CmaCh20G000310Cucurbita maxima (Rimu)cmacmaB111
CmaCh20G000310Cucurbita maxima (Rimu)cmacmaB470
CmaCh20G000310Cucumber (Gy14) v1cgycmaB0398
CmaCh20G000310Cucurbita moschata (Rifu)cmacmoB538
CmaCh20G000310Cucurbita moschata (Rifu)cmacmoB555
CmaCh20G000310Wild cucumber (PI 183967)cmacpiB543
CmaCh20G000310Cucurbita pepo (Zucchini)cmacpeB567
CmaCh20G000310Cucurbita pepo (Zucchini)cmacpeB586