BLAST of Cp4.1LG16g08970 vs. Swiss-Prot
Match:
RBM12_MOUSE (RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3)
HSP 1 Score: 119.0 bits (297), Expect = 7.1e-26
Identity = 75/210 (35.71%), Postives = 111/210 (52.86%), Query Frame = 1
Query: 43 VRLRGLPFDCMETDVVEFFHGL--DVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNR 102
V + G+PF ME DV EFFHGL D V +L H G+ G G P AL+RNR
Sbjct: 306 VSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHV-GRNNGNGLVKFLSPQDTFEALKRNR 365
Query: 103 QNMGRRYVEVFRSNRQEYYKAVANEVFDASGGS------PRRTAPRSKLTDEVKDSAEHT 162
M +RYVEV + +++ A + F S G P +T PRSK K S +
Sbjct: 366 MLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKRSRSRS 425
Query: 163 G-----VLRLRGLPYSAGKDDILDFFKDFILSEDSIHLTLNSEGRPSGEAFVEFSNEQDS 222
+ L+GLP+ A ++DFFK + EDSI++ G+ +GE FVEF N+ D
Sbjct: 426 PHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADY 485
Query: 223 KAAMSKDRMTLGSRYIELFPSSHEELDEAL 240
KAA+ + + +G+R+I++ P + + + E +
Sbjct: 486 KAALCRHKQYMGNRFIQVHPITKKGMLEKI 514
BLAST of Cp4.1LG16g08970 vs. Swiss-Prot
Match:
HNRPF_MACFA (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3)
HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 71/199 (35.68%), Postives = 115/199 (57.79%), Query Frame = 1
Query: 42 VVRLRGLPFDCMETDVVEFFHGLDVVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFAL 101
VV+LRGLP+ C DV F + D + F++ + G+ +GE F LG V AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 102 QRNRQNMGRRYVEVFRSNRQEYYKAVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGV 161
+++R++MG RY+EVF+S+R E + + + P S DSA + G
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVL------------KHSGPNSA------DSA-NDGF 131
Query: 162 LRLRGLPYSAGKDDILDFFKDFILSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKD 221
+RLRGLP+ K++I+ FF + + I L ++ EG+ +GEAFV+F++++ ++ A+ K
Sbjct: 132 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 191
Query: 222 RMTLGSRYIELFPSSHEEL 236
+ +G RYIE+F SS EE+
Sbjct: 192 KERIGHRYIEVFKSSQEEV 191
BLAST of Cp4.1LG16g08970 vs. Swiss-Prot
Match:
HNRPF_HUMAN (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3)
HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 71/199 (35.68%), Postives = 115/199 (57.79%), Query Frame = 1
Query: 42 VVRLRGLPFDCMETDVVEFFHGLDVVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFAL 101
VV+LRGLP+ C DV F + D + F++ + G+ +GE F LG V AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 102 QRNRQNMGRRYVEVFRSNRQEYYKAVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGV 161
+++R++MG RY+EVF+S+R E + + + P S DSA + G
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVL------------KHSGPNSA------DSA-NDGF 131
Query: 162 LRLRGLPYSAGKDDILDFFKDFILSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKD 221
+RLRGLP+ K++I+ FF + + I L ++ EG+ +GEAFV+F++++ ++ A+ K
Sbjct: 132 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 191
Query: 222 RMTLGSRYIELFPSSHEEL 236
+ +G RYIE+F SS EE+
Sbjct: 192 KERIGHRYIEVFKSSQEEV 191
BLAST of Cp4.1LG16g08970 vs. Swiss-Prot
Match:
RBM12_PONAB (RNA-binding protein 12 OS=Pongo abelii GN=RBM12 PE=2 SV=1)
HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25
Identity = 77/224 (34.38%), Postives = 115/224 (51.34%), Query Frame = 1
Query: 35 SQPPPFPV------VRLRGLPFDCMETDVVEFFHGL--DVVDILFVHKNGKFTGEGFCVL 94
S P P+ V + G+PF ME DV +FFHGL D V +L H G+ G G
Sbjct: 292 SSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHV-GRNNGNGLVKF 351
Query: 95 GYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYKAVANEVFDASGGS------PRRTAPR 154
P AL+RNR M +RYVEV + +++ A + F + G P +T PR
Sbjct: 352 LSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPR 411
Query: 155 SKLTDEVKDSAEHTG-----VLRLRGLPYSAGKDDILDFFKDFILSEDSIHLTLNSEGRP 214
SK K S + + L+GLP+ A ++DFFK + EDSI++ G+
Sbjct: 412 SKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKA 471
Query: 215 SGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAL 240
+GE FVEF NE D KAA+ + + +G+R+I++ P + + + E +
Sbjct: 472 TGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKI 514
BLAST of Cp4.1LG16g08970 vs. Swiss-Prot
Match:
RBM12_MACMU (RNA-binding protein 12 OS=Macaca mulatta GN=RBM12 PE=2 SV=1)
HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25
Identity = 77/224 (34.38%), Postives = 115/224 (51.34%), Query Frame = 1
Query: 35 SQPPPFPV------VRLRGLPFDCMETDVVEFFHGL--DVVDILFVHKNGKFTGEGFCVL 94
S P P+ V + G+PF ME DV +FFHGL D V +L H G+ G G
Sbjct: 292 SSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHV-GRNNGNGLVKF 351
Query: 95 GYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYKAVANEVFDASGGS------PRRTAPR 154
P AL+RNR M +RYVEV + +++ A + F + G P +T PR
Sbjct: 352 LSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQSHPPPQTLPR 411
Query: 155 SKLTDEVKDSAEHTG-----VLRLRGLPYSAGKDDILDFFKDFILSEDSIHLTLNSEGRP 214
SK K S + + L+GLP+ A ++DFFK + EDSI++ G+
Sbjct: 412 SKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKA 471
Query: 215 SGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAL 240
+GE FVEF NE D KAA+ + + +G+R+I++ P + + + E +
Sbjct: 472 TGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKI 514
BLAST of Cp4.1LG16g08970 vs. TrEMBL
Match:
A0A0A0L205_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G291930 PE=4 SV=1)
HSP 1 Score: 475.3 bits (1222), Expect = 4.4e-131
Identity = 232/243 (95.47%), Postives = 237/243 (97.53%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVVEF 60
MGAKRQRIVDQGSSYYGT PGSGFMYNTSPYA V+QPPPFPVVRLRGLPFDCMETDVVEF
Sbjct: 18 MGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEF 77
Query: 61 FHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYK 120
FHGLD+VDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVE+FRSNRQEYYK
Sbjct: 78 FHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYK 137
Query: 121 AVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFIL 180
AVANEVFDA GGSPRR+APRSKL DEVKDSAEHTGVLRLRGLPYSAGKDDILDFFK F L
Sbjct: 138 AVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNL 197
Query: 181 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEALS 240
SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEA+S
Sbjct: 198 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAIS 257
Query: 241 RGR 244
RGR
Sbjct: 258 RGR 260
BLAST of Cp4.1LG16g08970 vs. TrEMBL
Match:
V4W0L4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016322mg PE=4 SV=1)
HSP 1 Score: 421.4 bits (1082), Expect = 7.5e-115
Identity = 200/244 (81.97%), Postives = 220/244 (90.16%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSP-YACVSQPPPFPVVRLRGLPFDCMETDVVE 60
MGAKRQR++DQG S+YGTPP S FMYN P Y VSQPPPFPVVRLRGLPFDC E DV E
Sbjct: 16 MGAKRQRLIDQGPSFYGTPPSSSFMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAE 75
Query: 61 FFHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYY 120
FFHGLD+VD+LFVHKN KFTGE FCVLGYPLQVDFALQRNRQNMGRRYVEVFRS RQEYY
Sbjct: 76 FFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYY 135
Query: 121 KAVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFI 180
KA+ANEV D GGSP R+ PR+K DE KDSA HTG+LRLRGLP+SAGKDDI+DFFKDF+
Sbjct: 136 KAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV 195
Query: 181 LSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAL 240
LSEDSIH+T+NS+GRP+GEAFVEF+N +DSKAAM+KDRMTLGSRYIELFPSSHEE+DEAL
Sbjct: 196 LSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEAL 255
Query: 241 SRGR 244
SRGR
Sbjct: 256 SRGR 259
BLAST of Cp4.1LG16g08970 vs. TrEMBL
Match:
A0A067F1Q2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025001mg PE=4 SV=1)
HSP 1 Score: 421.4 bits (1082), Expect = 7.5e-115
Identity = 200/244 (81.97%), Postives = 220/244 (90.16%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSP-YACVSQPPPFPVVRLRGLPFDCMETDVVE 60
MGAKRQR++DQG S+YGTPP S FMYN P Y VSQPPPFPVVRLRGLPFDC E DV E
Sbjct: 16 MGAKRQRLIDQGPSFYGTPPSSSFMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAE 75
Query: 61 FFHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYY 120
FFHGLD+VD+LFVHKN KFTGE FCVLGYPLQVDFALQRNRQNMGRRYVEVFRS RQEYY
Sbjct: 76 FFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYY 135
Query: 121 KAVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFI 180
KA+ANEV D GGSP R+ PR+K DE KDSA HTG+LRLRGLP+SAGKDDI+DFFKDF+
Sbjct: 136 KAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV 195
Query: 181 LSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAL 240
LSEDSIH+T+NS+GRP+GEAFVEF+N +DSKAAM+KDRMTLGSRYIELFPSSHEE+DEAL
Sbjct: 196 LSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEAL 255
Query: 241 SRGR 244
SRGR
Sbjct: 256 SRGR 259
BLAST of Cp4.1LG16g08970 vs. TrEMBL
Match:
W9RTH9_9ROSA (Heterogeneous nuclear ribonucleoprotein F OS=Morus notabilis GN=L484_015297 PE=4 SV=1)
HSP 1 Score: 421.0 bits (1081), Expect = 9.8e-115
Identity = 200/243 (82.30%), Postives = 219/243 (90.12%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVVEF 60
MGAKRQR+V+QGSS+YGT PG FMYN + +A V QPPPFPVV+LRGLPFDC E DV EF
Sbjct: 1 MGAKRQRLVEQGSSFYGTSPGPSFMYNPATFAYVGQPPPFPVVKLRGLPFDCAEADVAEF 60
Query: 61 FHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYK 120
FHGLD+VD+LFVHK GKFTGE FCV GYPLQVDFALQRNRQNMGRRYVEVFRS RQEYYK
Sbjct: 61 FHGLDIVDVLFVHKYGKFTGEAFCVFGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYK 120
Query: 121 AVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFIL 180
A+A EVFDA GGSPRR PRSK DE KDSAEHTGVLRLRGLP+SAGKDDI+DFFKD +L
Sbjct: 121 AIAGEVFDARGGSPRRNIPRSKSYDEGKDSAEHTGVLRLRGLPFSAGKDDIIDFFKDIVL 180
Query: 181 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEALS 240
SEDSIH T+NSEGRP+GEAFVEF+N +DS+AAM+KDRMTLGSRYIELFPSSHEELDEAL+
Sbjct: 181 SEDSIHFTMNSEGRPTGEAFVEFANAEDSEAAMAKDRMTLGSRYIELFPSSHEELDEALA 240
Query: 241 RGR 244
RGR
Sbjct: 241 RGR 243
BLAST of Cp4.1LG16g08970 vs. TrEMBL
Match:
A0A061GSA0_THECC (RNA-binding family protein OS=Theobroma cacao GN=TCM_040707 PE=4 SV=1)
HSP 1 Score: 418.7 bits (1075), Expect = 4.9e-114
Identity = 197/245 (80.41%), Postives = 221/245 (90.20%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSP--YACVSQPPPFPVVRLRGLPFDCMETDVV 60
MGAKRQRI+DQG S+YGT PGS FMYN P Y VSQPPPFPVVRLRGLPFDC E DV
Sbjct: 16 MGAKRQRIIDQGPSFYGTSPGSSFMYNAPPPPYTYVSQPPPFPVVRLRGLPFDCTEADVA 75
Query: 61 EFFHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEY 120
EFFHGLD+VD+LFVHKN KFTGE FC+LGYPLQVDFALQ+NRQNMGRRYVEVFRS RQEY
Sbjct: 76 EFFHGLDIVDVLFVHKNSKFTGEAFCILGYPLQVDFALQKNRQNMGRRYVEVFRSKRQEY 135
Query: 121 YKAVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDF 180
YKA+ANEV DA GGSPRR PR+K +D+ KDSAEHTG+LRLRGLP+SAGKDDI++FFKDF
Sbjct: 136 YKAIANEVADARGGSPRRNVPRAKSSDDAKDSAEHTGILRLRGLPFSAGKDDIIEFFKDF 195
Query: 181 ILSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEA 240
+LSED+IH+ +NSEGRPSGEAFVEF+N +DSKAAM+KDRMTLGSRYIELFPSS EE+D+A
Sbjct: 196 VLSEDAIHIIMNSEGRPSGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSPEEMDDA 255
Query: 241 LSRGR 244
+SRGR
Sbjct: 256 ISRGR 260
BLAST of Cp4.1LG16g08970 vs. TAIR10
Match:
AT3G20890.1 (AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 354.4 bits (908), Expect = 5.7e-98
Identity = 181/278 (65.11%), Postives = 206/278 (74.10%), Query Frame = 1
Query: 1 MGAKRQRIVDQG--SSYYGTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVV 60
MG KRQR++DQG +YG P SGFMYN + PPPFP VRLRGLPFDC E DVV
Sbjct: 15 MGPKRQRMIDQGPPGPFYGPHPSSGFMYNPYGFVAPPPPPPFPAVRLRGLPFDCAELDVV 74
Query: 61 EFFHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEY 120
EFFHGLDVVD+LFVH+N K TGE FCVLGYPLQVDFALQ+NRQNMGRRYVEVFRS +QEY
Sbjct: 75 EFFHGLDVVDVLFVHRNNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYVEVFRSTKQEY 134
Query: 121 YKAVANEVFD------ASGG---------------------------SPRRTAPRSKLTD 180
YKA+ANEV + ASGG SPRR R++ +D
Sbjct: 135 YKAIANEVAESRVHGMASGGGGGLGGGNGSGGGGGGGGGGGRISGGSSPRRHVQRARSSD 194
Query: 181 EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFILSEDSIHLTLNSEGRPSGEAFVEFSN 240
+ K+ EHTG+LRLRGLP+SAGK+DILDFFKDF LSED +H+T+N EGRP+GEAFVEF N
Sbjct: 195 DGKEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRPTGEAFVEFRN 254
Query: 241 EQDSKAAMSKDRMTLGSRYIELFPSSHEELDEALSRGR 244
+DS+AAM KDR TLGSRYIELFPSS EEL+EALSRGR
Sbjct: 255 AEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRGR 292
BLAST of Cp4.1LG16g08970 vs. TAIR10
Match:
AT5G66010.1 (AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 211.8 bits (538), Expect = 4.6e-55
Identity = 115/249 (46.18%), Postives = 163/249 (65.46%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYY--GTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVV 60
+G+KRQR++ Q + Y GT P S + YA FPVVRLRGLPF+C + D+
Sbjct: 16 VGSKRQRMM-QSNPYLAVGTGPTS---FPPFGYA-----GGFPVVRLRGLPFNCADIDIF 75
Query: 61 EFFHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEY 120
EFF GL++VD+L V KNGKF+GE F V P+QV+ ALQR+R NMGRRYVEVFR ++Q+Y
Sbjct: 76 EFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFRCSKQDY 135
Query: 121 YKAVANE----VFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDF 180
Y AVA E ++ P R+K E K+ E+T VL++RGLPYS K I++F
Sbjct: 136 YNAVAAEEGAYEYEVRASPPPTGPSRAKRFSE-KEKLEYTEVLKMRGLPYSVNKPQIIEF 195
Query: 181 FKDFILSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEE 240
F + + + + + +G+ +GEAFVEF ++++ AM+KD+M++GSRY+ELFP++ EE
Sbjct: 196 FSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELFPTTREE 254
Query: 241 LDEALSRGR 244
A +R R
Sbjct: 256 ARRAEARSR 254
BLAST of Cp4.1LG16g08970 vs. NCBI nr
Match:
gi|449448717|ref|XP_004142112.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein F [Cucumis sativus])
HSP 1 Score: 475.3 bits (1222), Expect = 6.3e-131
Identity = 232/243 (95.47%), Postives = 237/243 (97.53%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVVEF 60
MGAKRQRIVDQGSSYYGT PGSGFMYNTSPYA V+QPPPFPVVRLRGLPFDCMETDVVEF
Sbjct: 18 MGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEF 77
Query: 61 FHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYK 120
FHGLD+VDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVE+FRSNRQEYYK
Sbjct: 78 FHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYK 137
Query: 121 AVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFIL 180
AVANEVFDA GGSPRR+APRSKL DEVKDSAEHTGVLRLRGLPYSAGKDDILDFFK F L
Sbjct: 138 AVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNL 197
Query: 181 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEALS 240
SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEA+S
Sbjct: 198 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAIS 257
Query: 241 RGR 244
RGR
Sbjct: 258 RGR 260
BLAST of Cp4.1LG16g08970 vs. NCBI nr
Match:
gi|1009118467|ref|XP_015875876.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform X2 [Ziziphus jujuba])
HSP 1 Score: 421.8 bits (1083), Expect = 8.2e-115
Identity = 199/243 (81.89%), Postives = 221/243 (90.95%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVVEF 60
M AKRQR+V+QGSS+YG PGS FMYN +PYA V QPPPFPVV+LRGLPFDC ETDV EF
Sbjct: 1 MSAKRQRVVEQGSSFYGASPGSSFMYNPTPYAYVGQPPPFPVVKLRGLPFDCTETDVAEF 60
Query: 61 FHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYK 120
FHGLD+VD+LFVHKNGKFTGE FCVLGYPLQVDFALQRNR NMGRRYVEVFRS RQEYYK
Sbjct: 61 FHGLDIVDVLFVHKNGKFTGEAFCVLGYPLQVDFALQRNRHNMGRRYVEVFRSKRQEYYK 120
Query: 121 AVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFIL 180
A+A EV DA GGSPRR+ PR+K E K++AEHTGVLRLRGLP+SAGKDDI++FFKDF+L
Sbjct: 121 AIAYEVSDARGGSPRRSIPRAKSYSEGKETAEHTGVLRLRGLPFSAGKDDIIEFFKDFVL 180
Query: 181 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEALS 240
SEDS+H T+NSEGRP+GEAFVEF+N +DSKAAM+KDRMTLGSRYIELFPSSHEELDEALS
Sbjct: 181 SEDSVHFTMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEELDEALS 240
Query: 241 RGR 244
RGR
Sbjct: 241 RGR 243
BLAST of Cp4.1LG16g08970 vs. NCBI nr
Match:
gi|1009118465|ref|XP_015875875.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform X1 [Ziziphus jujuba])
HSP 1 Score: 421.8 bits (1083), Expect = 8.2e-115
Identity = 199/243 (81.89%), Postives = 221/243 (90.95%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVVEF 60
M AKRQR+V+QGSS+YG PGS FMYN +PYA V QPPPFPVV+LRGLPFDC ETDV EF
Sbjct: 16 MSAKRQRVVEQGSSFYGASPGSSFMYNPTPYAYVGQPPPFPVVKLRGLPFDCTETDVAEF 75
Query: 61 FHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYK 120
FHGLD+VD+LFVHKNGKFTGE FCVLGYPLQVDFALQRNR NMGRRYVEVFRS RQEYYK
Sbjct: 76 FHGLDIVDVLFVHKNGKFTGEAFCVLGYPLQVDFALQRNRHNMGRRYVEVFRSKRQEYYK 135
Query: 121 AVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFIL 180
A+A EV DA GGSPRR+ PR+K E K++AEHTGVLRLRGLP+SAGKDDI++FFKDF+L
Sbjct: 136 AIAYEVSDARGGSPRRSIPRAKSYSEGKETAEHTGVLRLRGLPFSAGKDDIIEFFKDFVL 195
Query: 181 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEALS 240
SEDS+H T+NSEGRP+GEAFVEF+N +DSKAAM+KDRMTLGSRYIELFPSSHEELDEALS
Sbjct: 196 SEDSVHFTMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEELDEALS 255
Query: 241 RGR 244
RGR
Sbjct: 256 RGR 258
BLAST of Cp4.1LG16g08970 vs. NCBI nr
Match:
gi|567907621|ref|XP_006446124.1| (hypothetical protein CICLE_v10016322mg [Citrus clementina])
HSP 1 Score: 421.4 bits (1082), Expect = 1.1e-114
Identity = 200/244 (81.97%), Postives = 220/244 (90.16%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSP-YACVSQPPPFPVVRLRGLPFDCMETDVVE 60
MGAKRQR++DQG S+YGTPP S FMYN P Y VSQPPPFPVVRLRGLPFDC E DV E
Sbjct: 16 MGAKRQRLIDQGPSFYGTPPSSSFMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAE 75
Query: 61 FFHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYY 120
FFHGLD+VD+LFVHKN KFTGE FCVLGYPLQVDFALQRNRQNMGRRYVEVFRS RQEYY
Sbjct: 76 FFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYY 135
Query: 121 KAVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFI 180
KA+ANEV D GGSP R+ PR+K DE KDSA HTG+LRLRGLP+SAGKDDI+DFFKDF+
Sbjct: 136 KAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV 195
Query: 181 LSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAL 240
LSEDSIH+T+NS+GRP+GEAFVEF+N +DSKAAM+KDRMTLGSRYIELFPSSHEE+DEAL
Sbjct: 196 LSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEAL 255
Query: 241 SRGR 244
SRGR
Sbjct: 256 SRGR 259
BLAST of Cp4.1LG16g08970 vs. NCBI nr
Match:
gi|703121528|ref|XP_010102348.1| (Heterogeneous nuclear ribonucleoprotein F [Morus notabilis])
HSP 1 Score: 421.0 bits (1081), Expect = 1.4e-114
Identity = 200/243 (82.30%), Postives = 219/243 (90.12%), Query Frame = 1
Query: 1 MGAKRQRIVDQGSSYYGTPPGSGFMYNTSPYACVSQPPPFPVVRLRGLPFDCMETDVVEF 60
MGAKRQR+V+QGSS+YGT PG FMYN + +A V QPPPFPVV+LRGLPFDC E DV EF
Sbjct: 1 MGAKRQRLVEQGSSFYGTSPGPSFMYNPATFAYVGQPPPFPVVKLRGLPFDCAEADVAEF 60
Query: 61 FHGLDVVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSNRQEYYK 120
FHGLD+VD+LFVHK GKFTGE FCV GYPLQVDFALQRNRQNMGRRYVEVFRS RQEYYK
Sbjct: 61 FHGLDIVDVLFVHKYGKFTGEAFCVFGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYK 120
Query: 121 AVANEVFDASGGSPRRTAPRSKLTDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKDFIL 180
A+A EVFDA GGSPRR PRSK DE KDSAEHTGVLRLRGLP+SAGKDDI+DFFKD +L
Sbjct: 121 AIAGEVFDARGGSPRRNIPRSKSYDEGKDSAEHTGVLRLRGLPFSAGKDDIIDFFKDIVL 180
Query: 181 SEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEALS 240
SEDSIH T+NSEGRP+GEAFVEF+N +DS+AAM+KDRMTLGSRYIELFPSSHEELDEAL+
Sbjct: 181 SEDSIHFTMNSEGRPTGEAFVEFANAEDSEAAMAKDRMTLGSRYIELFPSSHEELDEALA 240
Query: 241 RGR 244
RGR
Sbjct: 241 RGR 243
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RBM12_MOUSE | 7.1e-26 | 35.71 | RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3 | [more] |
HNRPF_MACFA | 1.2e-25 | 35.68 | Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 ... | [more] |
HNRPF_HUMAN | 1.2e-25 | 35.68 | Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3 | [more] |
RBM12_PONAB | 2.7e-25 | 34.38 | RNA-binding protein 12 OS=Pongo abelii GN=RBM12 PE=2 SV=1 | [more] |
RBM12_MACMU | 2.7e-25 | 34.38 | RNA-binding protein 12 OS=Macaca mulatta GN=RBM12 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L205_CUCSA | 4.4e-131 | 95.47 | Uncharacterized protein OS=Cucumis sativus GN=Csa_4G291930 PE=4 SV=1 | [more] |
V4W0L4_9ROSI | 7.5e-115 | 81.97 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016322mg PE=4 SV=1 | [more] |
A0A067F1Q2_CITSI | 7.5e-115 | 81.97 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025001mg PE=4 SV=1 | [more] |
W9RTH9_9ROSA | 9.8e-115 | 82.30 | Heterogeneous nuclear ribonucleoprotein F OS=Morus notabilis GN=L484_015297 PE=4... | [more] |
A0A061GSA0_THECC | 4.9e-114 | 80.41 | RNA-binding family protein OS=Theobroma cacao GN=TCM_040707 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G20890.1 | 5.7e-98 | 65.11 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT5G66010.1 | 4.6e-55 | 46.18 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |