Cp4.1LG16g08770 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g08770
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Gibberellin-regulated family protein
Location	Cp4.1LG16 : 8228701 .. 8229765 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCACAACACAAAAAGAAAAACCCTCTTCAAAGGCCAAAGCATTGCACTAAACCCATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCTCTGCCCTCATGCTTCTTTCATCCACACACATTCAGGTAAATACAAAATTTTATCCTTTTTTTATTTATTTTTAATTCTTAATGAATTTCTCAATAAAAAATGAAACATTTTGAATATTCAAACAAAATGTTAATTAATAAATCTTTTTAAACAAAATAAAATCATCTTTTAGGTAAGTTTAAATAAAAAATAAATAATTGTAATAATAAACGTGGCGGTGACGTGGCGGTAACTTTGGCGGTTCACAATTAAATAATCGAGATGTGTTGATAAAAAGTGGACCGGCCGATGAAGCGGCGAGAAATAATGGGCGAATTTTCCCTGTCCCGCAGGCCGCCGTTAGCATTGAAACAGCAGTAGCGTCGTCAAAGATGTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGGTATTTTCTGTTCCCCTTTCAATGGTCCAGTCGGAACTATAATCTTAAGCTCTCTACATTTTTTTTGTTTTGGCCTTCTGCGGCGGCGTTTCAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTATTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCGAAATGCCCCTAGTTCATTTATTTCTCCCTTTTAAATGCTTTCCTGGGCAACAACCTCTTATTTCGACTCAAATGATGGTGTTTATGTTGATTAATGTAAGTTTATTTCGACACGAGTTTAGACAAGTATTAATGAAATTTAAACTTAATATTATTAAAATTAGCTCGTAAAATTGTTCCAATGCGTTTCTAATCAAAATGAGTCAAATACATTAAATAAAAAATTTAGGGGAAATATGACGTAACAATACAAATTTAGAGATAATTTTTTAATTTTATTTTTCTATTAGTTTGGAAATAATTGG

mRNA sequence

TGCACAACACAAAAAGAAAAACCCTCTTCAAAGGCCAAAGCATTGCACTAAACCCATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCTCTGCCCTCATGCTTCTTTCATCCACACACATTCAGGCCGCCGTTAGCATTGAAACAGCAGTAGCGTCGTCAAAGATGTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTATTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCGAAATGCCCCTAGTTCATTTATTTCTCCCTTTTAAATGCTTTCCTGGGCAACAACCTCTTATTTCGACTCAAATGATGGTGTTTATGTTGATTAATGTAAGTTTATTTCGACACGAGTTTAGACAAGTATTAATGAAATTTAAACTTAATATTATTAAAATTAGCTCGTAAAATTGTTCCAATGCGTTTCTAATCAAAATGAGTCAAATACATTAAATAAAAAATTTAGGGGAAATATGACGTAACAATACAAATTTAGAGATAATTTTTTAATTTTATTTTTCTATTAGTTTGGAAATAATTGG

Coding sequence (CDS)

ATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCTCTGCCCTCATGCTTCTTTCATCCACACACATTCAGGCCGCCGTTAGCATTGAAACAGCAGTAGCGTCGTCAAAGATGTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTATTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCGAAATGCCCCTAG

Protein sequence

MATLSTFLLLCSALMLLSSTHIQAAVSIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

Homology

[Close]

BLAST of Cp4.1LG16g08770 vs. Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.3e-31
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 1


Query: 34  SSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCP 93
           ++++YG ++G L P++C  +CT RCS TS+KKPCM FC+KCCAKCLCVP GTYGNKQ CP
Sbjct: 38  NNQLYGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCP 97

Query: 94  CYNNWKTKRGGPKCP 109
           CYNNWKTKRGGPKCP
Sbjct: 98  CYNNWKTKRGGPKCP 112

[Close]

BLAST of Cp4.1LG16g08770 vs. Swiss-Prot
Match: GASA6_ARATH (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.9e-28
Identity = 64/108 (59.26%), Postives = 76/108 (70.37%), Query Frame = 1


Query: 1   MATLSTFLLLCSALMLLSSTHIQAAVSIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MA L T  LL + L     T +   +S E A    + YG   GSL+  +CGG+CT RCS 
Sbjct: 1   MAKLITSFLLLTILF----TFVCLTMSKE-AEYHPESYG--PGSLKSYQCGGQCTRRCSN 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           T + KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++GGPKCP
Sbjct: 61  TKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Cp4.1LG16g08770 vs. Swiss-Prot
Match: GASA5_ARATH (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-27
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 43  GSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           G L+P++C  +C+ RCSATS KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 103 GGPKCP 109
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Cp4.1LG16g08770 vs. Swiss-Prot
Match: GASAC_ARATH (Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.1e-26
Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = 1


Query: 16  LLSSTHIQAAVSIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKC 75
           LL +T       +E+   +  ++  G +GSL+PEEC   C  RCSATS +KPC+ FC KC
Sbjct: 13  LLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKPCLFFCNKC 72

Query: 76  CAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           C KCLCVP GTYG+K+ CPCYNNW TK GGPKCP
Sbjct: 73  CNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of Cp4.1LG16g08770 vs. Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.4e-26
Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 1


Query: 45  LRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGG 104
           LRP +C  RCT RCSATS KKPCM FC+KCCA CLCVP G YGNKQ CPCYNNWKT+ G 
Sbjct: 33  LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGK 92

Query: 105 PKCP 109
           PKCP
Sbjct: 93  PKCP 96

[Close]

BLAST of Cp4.1LG16g08770 vs. TrEMBL
Match: F4YF97_CAMSI (Gibberellin induced protein OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-34
Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 1


Query: 9   LLCSALML-LSSTHIQAAVSIETAV----ASSKMYGGTQGSLRPEECGGRCTVRCSATSF 68
           +LC  LML L + ++QA+  ++  V     +++MYG TQGSLRP+ECG RCT RC+ T++
Sbjct: 9   ILCFVLMLGLLAENLQASFELQLQVFQLQGNNQMYGVTQGSLRPQECGARCTGRCAKTAY 68

Query: 69  KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           KKPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 69  KKPCMSFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 113

[Close]

BLAST of Cp4.1LG16g08770 vs. TrEMBL
Match: A0A067JQ68_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25966 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-33
Identity = 72/115 (62.61%), Postives = 84/115 (73.04%), Query Frame = 1


Query: 1   MATLSTFLLLCSALMLLSSTHIQAAVSIETAVAS-------SKMYGGTQGSLRPEECGGR 60
           M    + ++LC AL++L       A +    +AS       + MYG TQGSLRP+ECG R
Sbjct: 1   MGRAISIVMLCFALIMLVLLEENQAFNTAGILASQPQGKGKNAMYGATQGSLRPQECGPR 60

Query: 61  CTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           CT RCSAT++KKPCM FC+KCCAKCLCVPPGTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 61  CTTRCSATAYKKPCMFFCQKCCAKCLCVPPGTYGNKQYCPCYNNWKTKRGGPKCP 115

[Close]

BLAST of Cp4.1LG16g08770 vs. TrEMBL
Match: A9XNT4_9MYRT (Gibberellin induced protein (Fragment) OS=Sonneratia ovata PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 1   MATLSTFLLLCSA---LMLLSSTHIQAAVSIETAVAS-----SKMYGGTQGSLRPEECGG 60
           MA L++ L+L +A   ++LL  T   ++V     +       +KMYG ++GSLRP+ECG 
Sbjct: 2   MAKLASILILFAAFLFVLLLDETKASSSVVAANELQLQGRDINKMYGISEGSLRPQECGP 61

Query: 61  RCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           RCT RCSATSFKKPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 62  RCTRRCSATSFKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 117

[Close]

BLAST of Cp4.1LG16g08770 vs. TrEMBL
Match: M5WL91_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020764mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-33
Identity = 69/105 (65.71%), Postives = 80/105 (76.19%), Query Frame = 1


Query: 4   LSTFLLLCSALMLLSSTHIQAAVSIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSF 63
           LS F+L  +ALML+              +  +  YG TQGSLRP+ECG RCT RCSAT++
Sbjct: 5   LSIFMLCVAALMLV--------------LLEANQYGTTQGSLRPQECGPRCTTRCSATAY 64

Query: 64  KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           KKPC+ FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 65  KKPCLFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 95

[Close]

BLAST of Cp4.1LG16g08770 vs. TrEMBL
Match: A9XNT2_9MYRT (Gibberellin induced protein (Fragment) OS=Sonneratia alba PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-33
Identity = 73/116 (62.93%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 1   MATLSTFLLLCSA---LMLLSSTHIQAAVSIETAVAS-----SKMYGGTQGSLRPEECGG 60
           MA L++ L+L +A   ++LL  T   ++V     +       +KMYG ++GSLRP+ECG 
Sbjct: 2   MAKLASILILFAAFLFVLLLEETEASSSVVAANELQLQGRDINKMYGISEGSLRPQECGP 61

Query: 61  RCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           RCT RCSATS+KKPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 62  RCTRRCSATSYKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 117

[Close]

BLAST of Cp4.1LG16g08770 vs. TAIR10
Match: AT1G74670.1 (AT1G74670.1 Gibberellin-regulated family protein)

HSP 1 Score: 124.0 bits (310), Expect = 5.6e-29
Identity = 64/108 (59.26%), Postives = 76/108 (70.37%), Query Frame = 1


Query: 1   MATLSTFLLLCSALMLLSSTHIQAAVSIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MA L T  LL + L     T +   +S E A    + YG   GSL+  +CGG+CT RCS 
Sbjct: 1   MAKLITSFLLLTILF----TFVCLTMSKE-AEYHPESYG--PGSLKSYQCGGQCTRRCSN 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           T + KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++GGPKCP
Sbjct: 61  TKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Cp4.1LG16g08770 vs. TAIR10
Match: AT3G02885.1 (AT3G02885.1 GAST1 protein homolog 5)

HSP 1 Score: 123.2 bits (308), Expect = 9.5e-29
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 43  GSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           G L+P++C  +C+ RCSATS KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 103 GGPKCP 109
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Cp4.1LG16g08770 vs. TAIR10
Match: AT2G30810.1 (AT2G30810.1 Gibberellin-regulated family protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.3e-27
Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = 1


Query: 16  LLSSTHIQAAVSIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKC 75
           LL +T       +E+   +  ++  G +GSL+PEEC   C  RCSATS +KPC+ FC KC
Sbjct: 13  LLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKPCLFFCNKC 72

Query: 76  CAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           C KCLCVP GTYG+K+ CPCYNNW TK GGPKCP
Sbjct: 73  CNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of Cp4.1LG16g08770 vs. TAIR10
Match: AT3G10185.1 (AT3G10185.1 Gibberellin-regulated family protein)

HSP 1 Score: 114.0 bits (284), Expect = 5.8e-26
Identity = 60/110 (54.55%), Postives = 71/110 (64.55%), Query Frame = 1


Query: 1   MAT-LSTFLLLCSALMLLSSTHIQAAVSIETAVASSKMYGGTQGSLRPE-ECGGRCTVRC 60
           MAT LS  +     L LL S H+   +++            T+ ++ P  ECG RC  RC
Sbjct: 1   MATKLSIIVFSIVVLHLLLSAHMHFLINVCAECE-------TKSAIPPLLECGPRCGDRC 60

Query: 61  SATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           S T +KKPC+ FC KCC KCLCVPPGTYGNKQ+CPCYNNWKTK GGPKCP
Sbjct: 61  SNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Cp4.1LG16g08770 vs. TAIR10
Match: AT5G15230.1 (AT5G15230.1 GAST1 protein homolog 4)

HSP 1 Score: 104.8 bits (260), Expect = 3.5e-23
Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 1


Query: 7   FLLLCSALMLLSSTHIQAAVSIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKP 66
           FLL    L +L +  +  A S      S K YG   GSL+  +C   C  RC  T + K 
Sbjct: 9   FLLTLIVLFMLQT--MVMASSGSNVKWSQKRYG--PGSLKRTQCPSECDRRCKKTQYHKA 68

Query: 67  CMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           C+ FC KCC KCLCVPPG YGNKQ+C CYNNWKT+ GGPKCP
Sbjct: 69  CITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of Cp4.1LG16g08770 vs. NCBI nr
Match: gi|330318577|gb|AEC10958.1| (gibberellin induced protein [Camellia sinensis])

HSP 1 Score: 152.1 bits (383), Expect = 5.4e-34
Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 1


Query: 9   LLCSALML-LSSTHIQAAVSIETAV----ASSKMYGGTQGSLRPEECGGRCTVRCSATSF 68
           +LC  LML L + ++QA+  ++  V     +++MYG TQGSLRP+ECG RCT RC+ T++
Sbjct: 9   ILCFVLMLGLLAENLQASFELQLQVFQLQGNNQMYGVTQGSLRPQECGARCTGRCAKTAY 68

Query: 69  KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           KKPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 69  KKPCMSFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 113

[Close]

BLAST of Cp4.1LG16g08770 vs. NCBI nr
Match: gi|802765576|ref|XP_012090061.1| (PREDICTED: protein GAST1-like [Jatropha curcas])

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-33
Identity = 72/115 (62.61%), Postives = 84/115 (73.04%), Query Frame = 1


Query: 1   MATLSTFLLLCSALMLLSSTHIQAAVSIETAVAS-------SKMYGGTQGSLRPEECGGR 60
           M    + ++LC AL++L       A +    +AS       + MYG TQGSLRP+ECG R
Sbjct: 1   MGRAISIVMLCFALIMLVLLEENQAFNTAGILASQPQGKGKNAMYGATQGSLRPQECGPR 60

Query: 61  CTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           CT RCSAT++KKPCM FC+KCCAKCLCVPPGTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 61  CTTRCSATAYKKPCMFFCQKCCAKCLCVPPGTYGNKQYCPCYNNWKTKRGGPKCP 115

[Close]

BLAST of Cp4.1LG16g08770 vs. NCBI nr
Match: gi|743904029|ref|XP_011045379.1| (PREDICTED: protein GAST1-like [Populus euphratica])

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-33
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 1


Query: 1   MATLSTFLLLCSALMLLSSTHIQAAVSIETAVASSK--------MYGGTQGSLRPEECGG 60
           M   S  +LLCS L+L      QA   ++T +++S+        MYG TQGSLRP+EC  
Sbjct: 1   MGKSSIAILLCSLLVLFLLGQNQA---LKTPISASQPQRQGNHAMYGATQGSLRPQECAP 60

Query: 61  RCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           RCT RCSAT++KKPC+ FC+KCCAKCLCVPPGTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 61  RCTTRCSATAYKKPCLFFCQKCCAKCLCVPPGTYGNKQSCPCYNNWKTKRGGPKCP 113

[Close]

BLAST of Cp4.1LG16g08770 vs. NCBI nr
Match: gi|146454674|gb|ABQ42003.1| (gibberellin induced protein [Sonneratia ovata])

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-33
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 1   MATLSTFLLLCSA---LMLLSSTHIQAAVSIETAVAS-----SKMYGGTQGSLRPEECGG 60
           MA L++ L+L +A   ++LL  T   ++V     +       +KMYG ++GSLRP+ECG 
Sbjct: 2   MAKLASILILFAAFLFVLLLDETKASSSVVAANELQLQGRDINKMYGISEGSLRPQECGP 61

Query: 61  RCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           RCT RCSATSFKKPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 62  RCTRRCSATSFKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 117

[Close]

BLAST of Cp4.1LG16g08770 vs. NCBI nr
Match: gi|720094011|ref|XP_010246225.1| (PREDICTED: protein GAST1-like [Nelumbo nucifera])

HSP 1 Score: 149.4 bits (376), Expect = 3.5e-33
Identity = 70/109 (64.22%), Postives = 81/109 (74.31%), Query Frame = 1


Query: 6   TFLLLCSALMLLSSTHIQAAVSI------ETAVASSKMYGGTQGSLRPEECGGRCTVRCS 65
           T +L    +ML+    +QAA +       E   A+  MYG TQGSL+P+EC  RCT RCS
Sbjct: 7   TLMLCLVTMMLILLIEVQAAKTTTEPPAAEPQSATFHMYGATQGSLQPQECAPRCTARCS 66

Query: 66  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           AT++KKPCM FC+KCCAKCLCVPPGTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 67  ATAYKKPCMFFCQKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 115

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g08770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GAST1_SOLLC	4.3e-31	72.00	Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1	[more]
GASA6_ARATH	9.9e-28	59.26	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1	[more]
GASA5_ARATH	1.7e-27	74.24	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1	[more]
GASAC_ARATH	4.1e-26	56.38	Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12 PE=3 SV=1	[more]
RSI1_SOLLC	5.4e-26	76.56	Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g08770 vs. TrEMBL


Match Name	E-value	Identity	Description
F4YF97_CAMSI	3.8e-34	66.67	Gibberellin induced protein OS=Camellia sinensis PE=2 SV=1	[more]
A0A067JQ68_JATCU	1.1e-33	62.61	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25966 PE=4 SV=1	[more]
A9XNT4_9MYRT	1.9e-33	63.79	Gibberellin induced protein (Fragment) OS=Sonneratia ovata PE=4 SV=1	[more]
M5WL91_PRUPE	3.2e-33	65.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020764mg PE=4 SV=1	[more]
A9XNT2_9MYRT	3.2e-33	62.93	Gibberellin induced protein (Fragment) OS=Sonneratia alba PE=4 SV=1	[more]

BLAST of Cp4.1LG16g08770 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74670.1	5.6e-29	59.26	Gibberellin-regulated family protein	[more]
AT3G02885.1	9.5e-29	74.24	GAST1 protein homolog 5	[more]
AT2G30810.1	2.3e-27	56.38	Gibberellin-regulated family protein	[more]
AT3G10185.1	5.8e-26	54.55	Gibberellin-regulated family protein	[more]
AT5G15230.1	3.5e-23	51.96	GAST1 protein homolog 4	[more]

BLAST of Cp4.1LG16g08770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|330318577\|gb\|AEC10958.1\|	5.4e-34	66.67	gibberellin induced protein [Camellia sinensis]	[more]
gi\|802765576\|ref\|XP_012090061.1\|	1.6e-33	62.61	PREDICTED: protein GAST1-like [Jatropha curcas]	[more]
gi\|743904029\|ref\|XP_011045379.1\|	2.7e-33	62.93	PREDICTED: protein GAST1-like [Populus euphratica]	[more]
gi\|146454674\|gb\|ABQ42003.1\|	2.7e-33	63.79	gibberellin induced protein [Sonneratia ovata]	[more]
gi\|720094011\|ref\|XP_010246225.1\|	3.5e-33	64.22	PREDICTED: protein GAST1-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003854	GASA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g08770.1	Cp4.1LG16g08770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 49..108 score: 1.3
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 3..108 score: 6.3
None	No IPR available	PANTHER	PTHR23201:SF8	SUBFAMILY NOT NAMED	coord: 3..108 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g08770	CmaCh20G001000	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g08770	Carg06888	Silver-seed gourd	carcpeB0733

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g08770	Silver-seed gourd	carcpeB0654
Cp4.1LG16g08770	Silver-seed gourd	carcpeB1273
Cp4.1LG16g08770	Cucumber (Chinese Long) v3	cpecucB0333
Cp4.1LG16g08770	Cucumber (Chinese Long) v3	cpecucB0348
Cp4.1LG16g08770	Wax gourd	cpewgoB0354
Cp4.1LG16g08770	Wax gourd	cpewgoB0375
Cp4.1LG16g08770	Cucurbita pepo (Zucchini)	cpecpeB287
Cp4.1LG16g08770	Cucurbita pepo (Zucchini)	cpecpeB305
Cp4.1LG16g08770	Cucurbita pepo (Zucchini)	cpecpeB310
Cp4.1LG16g08770	Cucumber (Gy14) v1	cgycpeB0315
Cp4.1LG16g08770	Cucurbita maxima (Rimu)	cmacpeB125
Cp4.1LG16g08770	Cucurbita maxima (Rimu)	cmacpeB627
Cp4.1LG16g08770	Cucurbita moschata (Rifu)	cmocpeB053
Cp4.1LG16g08770	Cucurbita moschata (Rifu)	cmocpeB102
Cp4.1LG16g08770	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g08770	Cucurbita moschata (Rifu)	cmocpeB576
Cp4.1LG16g08770	Wild cucumber (PI 183967)	cpecpiB268
Cp4.1LG16g08770	Wild cucumber (PI 183967)	cpecpiB283
Cp4.1LG16g08770	Cucumber (Chinese Long) v2	cpecuB281
Cp4.1LG16g08770	Bottle gourd (USVL1VR-Ls)	cpelsiB227
Cp4.1LG16g08770	Bottle gourd (USVL1VR-Ls)	cpelsiB246
Cp4.1LG16g08770	Watermelon (Charleston Gray)	cpewcgB255
Cp4.1LG16g08770	Watermelon (Charleston Gray)	cpewcgB276
Cp4.1LG16g08770	Watermelon (97103) v1	cpewmB287
Cp4.1LG16g08770	Melon (DHL92) v3.5.1	cpemeB278
Cp4.1LG16g08770	Cucumber (Gy14) v2	cgybcpeB037
Cp4.1LG16g08770	Cucumber (Gy14) v2	cgybcpeB755
Cp4.1LG16g08770	Melon (DHL92) v3.6.1	cpemedB324