Cp4.1LG16g08470 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g08470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pectinesterase
Location	Cp4.1LG16 : 8041521 .. 8054475 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAGATTTTGTTCATATTAAAAGGCACTAGAAACTTATATTATCCTCATGGTCCCATCATATTGTATTTTCGGCCCATACTTAAGATCCAACTCGGCCCAATAAGAAAAGGGGATAGGCCCAATAAGAAAGGGGGAATAGGCCCAAACTATAGCGGCCGACTTGAGGGGCCCGGCCCAACCGTCGTCTCCAAAATCTTCTTCTTCTCTCTGTTTACCAGCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGGTGTGTTTCTCGAGAGCTACGTTTTTCTTTCAATTTCGAAATTGTAAGATTACTCGGTTGGAATGGTTTTCTGTGAACTTATCATAATTCCAGTTTTTGGTGGGTTAATTTTAGAGTCTTAATGTGCGGGACTTAGCTTGATTCCAGTTATTTTCTCATTGTTAGGGCTTTGTTGTTGTTCCCTGAGTTCTTATAACTGATTTTGAAATTCCATTGAATTCTTAACTTATCATTCGAGTATTTTGATGGAGCAGATGGCAGCAATGAATTGGCCGTAGTTGAATACATGGATGAGATGTATAAGTTTTATAAGCTTGGTTGATTGAAGTTCATCGCAAATTTGAACTTATGATGACTGTACCATGGAAGGAACTTCACCTCTATGATCATAGCATGTAAATATGGAGAGATTTTGGCCTCAGAGGTAAATTATTTGTTTTTTTTCCTTTCTTTCACACGTGTGTACTATCCTTGAAAAACTCTTTTTGAAAGCAAGACTTGAGGATGTGACACAGAGTAGCTTGTTTAGGCTATAGGGCCCAAGAGTGCTGGAGAACTGACATCATACCTCACACTATAGTACATTTTGAGATATTTTTTTTAGACATTTTGAAGGCGAGTAGACATACAATTTTGTGCATAGTCTGTCGAGTACTTGATTGACATCAAACTTGGTGAGGTTTCATCTTTCATATAGACGGACTTAATTCTCAAGTAGCATGTCAAAACTCATCGAAATCCTGATTTCTGAGGTTATGGCCCGGGGCTCTACTCGACCTTCTTCGAGTTTGTCTTTGATACTCATGTCACCTTGTTGTCTCGAACCTTACATATGCATATGCCTCACTTAGCTTGAATGCATTCTCTTTGCGTATGCCTCGGGTGTTAACCTCGAAAGTCGGAGTTCCATAGGGAATTTGACGAGCTTTCATATTTCATAAAACCCCATGCCCAAATTCCCTCTGGAACCCCGACTTTTGAGGTTAAGGCACGGGGCCTTACTCGGCCCTTCAACAAGTCTATCTATGACGCTTATGTCTACTACTCATTGTCCCTATGTTTCTTATGTCTTGTTTTCTATTCAATGCACACGTTATATGGTGTGTTAGATGCGTTGTCCCTATTTTGCTTCAGTCTCATTTCCTCTTCAATGCACACGTTATATGGTGTGTTGGATGATGCACCGTCTCTGTTGGTCGCATCGTGACACTTTGAACCACATGTCCAAATTCTCTCTGGAACCTCAACTTTCGAGGTTAAGGCCCGGGACCCTACCCGTCCCTTCAACAAGCATATCTTTGACACCCATGTCTATTAGTCATTGTCCCTGCCTCTTTCTATTCAATACACACATTATATGGTGTGTTGGATGCATTGTCCCTATCTTGCTTATGCTTTGTTTTCTTTTCAATATGGTTTGTTGGATGATGCATCATCCGACACTTCAAAATCTTCTTTTCATTTACTAGGTAGAATAGTTAAAAGTCAAAAGGACCTAAATTCACTATGGAACCCCGAATTTTGAAGTTAAGGTTGGGGCCCTACCCGACCCTTCAACAAGATTATCTGTGACGTTCATGTCTATTACTTGTTGTCCCTATCTTGTTTATGCCTCGTTTTCTATTTATATGGTGCATTGGATGCATTGTCCCTATCTTTTTGTTTCCTTTTCAATGTAAACATTATATGTTTCCTTTTCCTTTAGAACCGGGGGCCCTACTCACCCTTCAGCAAGCATATCTGTGACACTCATGTCTACTACTCGTTGTCTTTATCTTGTCTCGTTTTCTATCTTGCTCATGCCTCGTTTCTTCTTCAATGCACACATTATATGGTGTGTTGCCCCTTGGTCGCATCATGACATTCTTCTCTATTTGACACCTCATGTGGTTGGGTGGGCATTTCTTGAGGGTTAATGTATTGCTTGTCTCTTCATAATTGGATTGTGATGCAATCCCATCAAGATGGGATTGCTTGACGTTGCATATTAGAACTCATTAAAGCTTCGATAAAAGGAATGAGGGAAGCTCCAATAGAAAAATATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAATTAGTATTTCTCTTATGAAGAAAATGGGTAAGATTTTGTTCATATTAAAAGGCACTAGAAACTTATATTATCCTCATGGTCCCATCATATTGTATTTTCGGCCCATACTTAAGATCCAACTCGGCCCAATAAGAAAAGGGGATAGGCCCAATAAGAAAGGGGGAATAGGCCCAAACTATAGCGGCCGACTTGAGGGGCCCGGCCCAACCGTCGTCTCCAAAATCTTCTTCTTCTCTCTGTTTACCAGCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGGTGTGTTTCTCGAGAGCTACGTTTTTCTTTCAATTTCGAAATTGTAAGATTACTCGGTTGGAATGGTTTTCTGTGAACTTATCATAATTCCAGTTTTTGGTGGGTTAATTTTAGAGTCTTAATGTGCGGGACTTAGCTTGATTCCAGTTATTTTCTCATTGTTAGGGCTTTGTTGTTGTTCCCTGAGTTCTTATAACTGATTTTGAAATTCCATTGAATTCTTAACTTATCATTCGAGTATTTTGATGGAGCAGATGGCAGCAATGAATTGGCCGTAGTTGAATACATGGATGAGATGTATAAGTTTTATAAGCTTGGTTGATTGAAGTTCATCGCAAATTTGAACTTATGATGACTGTACCATGGAAGGAACTTCACCTCTATGATCATAGCATGTAAATATGGAGAGATTTTGGCCTCAGAGGTAAATTATTTGTTTTTTTTCCTTTCTTTCACACGTGTGTACTATCCTTGAAAAACTCTTTTTGAAAGCAAGACTTGAGGATGTGACACAGAGTAGCTTGTTTAGGCTATAGGGCCCAAGAGTGCTGGAGAACTGACATCATACCTCACACTATAGTACATTTTGAGATATTTTTTTTAGACATTTTGAAGGCGAGTAGACATACAATTTTGTGCATAGTCTGTCGAGTACTTGATTGACATCAAACTTGGTGAGGTTTCATCTTTCATATAGACGGACTTAATTCTCAAGTAGCATGTCAAAACTCATCGAAATCCTGATTTCTGAGGTTATGGCCCGGGGCTCTACTCGACCTTCTTCGAGTTTGTCTTTGATACTCATGTCACCTTGTTGTCTCGAACCTTACATATGCATATGCCTCACTTAGCTTGAATGCATTCTCTTTGCGTATGCCTCGGGTGTTAACCTCGAAAGTCGGAGTTCCATAGGGAATTTGACGAGCTTTCATATTTCATAAAACCCCATGCCCAAATTCCCTCTGGAACCCCGACTTTTGAGGTTAAGGCACGGGGCCTTACTCGGCCCTTCAACAAGTCTATCTATGACGCTTATGTCTACTACTCATTGTCCCTATGTTTCTTATGTCTTGTTTTCTATTCAATGCACACGTTATATGGTGTGTTAGATGCGTTGTCCCTATTTTGCTTCAGTCTCATTTCCTCTTCAATGCACACGTTATATGGTGTGTTGGATGATGCACCGTCTCTGTTGGTCGCATCGTGACACTTTGAACCACATGTCCAAATTCTCTCTGGAACCTCAACTTTCGAGGTTAAGGCCCGGGACCCTACCCGTCCCTTCAACAAGCATATCTTTGACACCCATGTCTATTAGTCATTGTCCCTGCCTCTTTCTATTCAATACACACATTATATGGTGTGTTGGATGCATTGTCCCTATCTTGCTTATGCTTTGTTTTCTTTTCAATATGGTTTGTTGGATGATGCATCATCCGACACTTCAAAATCTTCTTTTCATTTACTAGGTAGAATAGTTAAAAGTCAAAAGGACCTAAATTCACTATGGAACCCCGAATTTTGAAGTTAAGGTTGGGGCCCTACCCGACCCTTCAACAAGATTATCTGTGACGTTCATGTCTATTACTTGTTGTCCCTATCTTGTTTATGCCTCGTTTTCTATTTATATGGTGCATTGGATGCATTGTCCCTATCTTTTTGTTTCCTTTTCAATGTAAACATTATATGTTTCCTTTTCCTTTAGAACCGGGGGCCCTACTCACCCTTCAGCAAGCATATCTGTGACACTCATGTCTACTACTCGTTGTCTTTATCTTGTCTCGTTTTCTATCTTGCTCATGCCTCGTTTCTTCTTCAATGCACACATTATATGGTGTGTTGCCCCTTGGTCGCATCATGACATTCTTCTCTATTTGACACCTCATGTGGTTGGGTGGGCATTTCTTGAGGGTTAATGTATTGCTTGTCTCTTCATAATTGGATTGTGATGCAATCCCATCAAGATGGGATTGCTTGACGTTGCATATTAGAACTCATTAAAGCTTCGATAAAAGGAATGAGGGAAGCTCCAATAGAAAAATATTGGAGGGGAAAAATACTTCGAAGATAACTTGTTCCCACTCAATAGTCAAGAATTCTTGACGGTATCGAGTTGAACAATCTGTTTTTTTTTAATACTGCCAAAGAATTTGTTACCATATAGTATTCATCTCGACTTGGTGATAAATAAAGCATCCGCACTTTTTTTGGTCTTCACGTGATCGGATGAGCGTCACTTGAGAGTAATCCCTTGTCTATCTTGCATATCGGGGTCACAACCTACTTTCCCTCACTCAAATACAACCTACTTTTCCTNTCTTCACGTGATCGGATGAGCGTCACTTGAGAGTAATCCCTTGTCTATCTTGCATATCGGGGTCACAACCTACTTTCCCTCACTCAAATACAACCTACTTTTCCTCACTTAAATACGATTGTAACACTGCATGCCCAAATTTCCTTTGGAACAAGCCTGGGCCCTACTCACCTTTAAGCAAGCCTATCAAGCCTATATGTGACGCTCATGTCTCGTTGTCTCTATCTTGCTTATATCTCGTTTTCTATCTTGCTCATGTCTCGTTTAAATACGATTGTAATACTTCAACTGCATGCCCAAATTTCCTTTGGAACCGGCTTGGGCCCTACTCACTCTTCAGCAAGCCTATCAAGCCTATCTGTGACGCTCATGTCTCGTTGTCTCTATCTTGCTTATGTCTCGTTTTCTATTTTGCTCATGTCTCGTTTTCTATCTTGCTCATACCCCCTTATCTTTTCAATGTAAATGGTATATGGTTTGTTGGATGATGCATCATCCTCTTCCCATCATGACACTTCAATTGCATGCCCAAATTTCCTTTGGAACCGGCCCGAGGTCCTACTCACCCTTCAACAAGCCTATCTGTGATGCTCATGTCTCATTGTCTCTATCTTGCTCATGTCTCGTTTTCTATCTTGCTCATGCCTCTTCAATGCACACCTAATGACATTCTTCTATTGGTCGCATCATGACATTCTTTTATATTGACACTTCATGTGGCCGCACTCATGTCTCGTTTTCTATCTTGCTCATGCCTCTTCAATGCACACATAATGACACTCTTCTATTGGTCGCGTCATGACATTCTTCTGTATTGACACCTCATGTGGCCGTGGGCACTTCTTAAACGTTACTATTTTGCTTGTCTCTTCATAATATGGTTGTGACGTTAATATGGGTGTATTGGATTGTGATGGTTGTGGCATAATCCCATCGTGGGTTGTGACATTTGCACTGTCCTCCAAGCTTGGTCTTCACGTGATTGGATGTCCCTTGTCTATCTTGCGTGTGGGGTCACAACCTACTTTTCCTCACTCAAATACGATTGTGACACGAAACTCCACAATGATACAACAACCTACTTTTCCTCACTCAAATACGATTGTGACACGAAACTCCACAATGATATGATATTGTCCACTACTTCAATGGTGCGATATTGTCCACTACTTCAATAGTACGATATTGTCCACTACTTCAATGGTATGATATTGTCCAAAAACCTCGTACCAATGGAAATAGCTTCCTTGATTATAAACCTATGATCAAATAGTTTCGTTGATTATAAATTCATGATCAAATAGCTTCCTTGATTATAAATCCATGATCAAATAGCTTCCTTGATTATCAACCCATGATCAAATATCTTCCTTTATTATAAACCCAACCCATCAAATATCTTCCTTTGATTATAAACCCAACCCATCAAANATTATAAATCCAGAATCAAATAGCTTCCTTGATTATAAACCCAGAATCAAATAGCTTCCTTGATTATAAACCATGATCAAATATCTTCCTTGATTATAAACCCATGATCAAATAGCTTCCTTGATTATAAACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATAAAATGTTATTTTAAAATTATATTTTTGTTTGTTTGGAGGAAATAGTCTTCCACCAGATACGGAAAGGTAAAACGAATTCACAAATATTAGGTGGGTTCTTATGGTTCACAGTGGGACCCATCACCCTATATAATCCCTACCTTCTCCATGCAATTCAACGTACTCATTCACCCATCCTTATTTTAAAAATAAAATAAATCGCTTCAAGAAAACAACAAAAAATATGAATATTGCTCTCACAACATTGCTCATCTTCCTGGCAGCTTTTGCACCCATCTCTTCTGCTACAACAGAGGTTCCTGCAGAGAAGTCGCAGTTAGAAGCTTGGTTTTCCGGACATGTGAAGCCCTTAGCCGACCGCAAGGCCGAGCTTGATCCCGCCCTTGTGGCCGCTGAAGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATAGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCAAAATTGACATTCGATGGAGATTCCAAAAAATACGGCACCGTGTACAGTGGAACTTTGACCGTCGAGGCTGAGTATTTTGTTGCTGCCAATCTCGTGATCGAGGTAATTTGTTAATTAAATGCATTTTAGGATTAATTGGGTATCGTTTTCTAATCAATTTTTGAATAAAATCAGAACACTTCTCCAAGACCGGATGCGAGAAAAGGAGGTCCGGCACTGGCGGCGAGAATCAGAGGGAATAAAGCCGCAATTTACAATTGCAAATTCCTAGGGTTCCAAGACACCCTGTGCGACGACGACGGGATGCATGTGTACAAGGATTGCATCATTGAAGGCACTGTGGACTTCATCTTCGGGAAGGCAACGTCCCTGTATTTGAACAGTCAGCTGAATGTGCTGGGAGAAGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGGTATGTGTTTGCGCATTGCAGCGTTACAGGCACTGGCGGGCCGAACACTTATTTGGCAAGATCCTGGAGGCCTTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTCGGAGAATTTAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTGTAAAATTCAGCAAACAGCTGAGTGAAGCACAAGCGAAACCCTTCATCAACCTTGATTACGTGCAGGCCCAAAAGTGGTTGCTTCCTCCTCCCAAACTATAGGCTTTCACAGTTGCAGGAAGAGTGGCAGTCGATTGGGTTGATCATTAATTACCTCATTCACATTCTTTCTTTTTTCTTTTCTTTTCCCCTTAACAATAACATGTCTGTAACCTCATCCTTTCATATTGAATTGTAATGAGATGAAATAAATAAAATTCTATTTCATGGACACTACAAACCTGCTGTATCCAAACCGATTAAACGCAGACTAAACTCTTTGTTATAATGAATTTGACATTGTAATAACATATCAGATCAAACGAATTCAAATCCCTCTGCTCGATCATCAACCACAAAAGCGTGCAGCTGGCCATGAATCTGAACCCAACTACAGCCAGGGCTCTTTTTCGCTCCTCTAGACTTCATAAGTTCCCTAATCCTGTTTACCTCATCCCATCTTCCTGTTTCTGCATACATGTTTGAAAGAAGAATATAGTATCCACAATGCTGAGGCTTTAGCTCAAATAAATGCTCTGCTGCCTTACACCCTAGTTCAACGTTTCCGTAAATTCGACAAGCACCAAGTAGAGCTCCCCAAATATTTGAATCGGGCGCTATCGGTAGTCGCCGAATCAGCTCTGCTGCCTCTTCTACGAAACCAGCACGGCCGAGTAGATCAACCAGACATGTATAGTGCATTTCGGTGGGTTCAAGATGTTGATCCAACATCTCGCTGAAGTATTGCCAACCACGTTCAACTAGTCCTCCATGACTACAAGCTGACAGAACTGCAATATATGAAACTAAATCATATTGCACTTTATCATCCCTCATTGCTTCAAACATATTAATTGCAGATTCCAACTCTCCTATCATTCCATATCCTAAAATCATAGTATTCCAAGATGCTACATCTTTGAATAGAATTTGATTGAAGATCTTACAAGCAAGATCAATTCTTCCACATTTTGTATAAAAGTCCAATAGGGAGTTTGAGACAAATAGATGAGAGTTAAGATGATTTCTTAATGCAACACCATGAATCTCTTTACCTTGCTTGACTGCGGCTAGGTTTGCACAAGCTGATATGACCCCCATAAAGGAAACGACATCAGGCTTTTTACCAAGCAGCCTCATTTCTGAGAACAAATTCAGAGACTCCAAGCAATCGTTTGTTTCAGAATATCCTGTAATTAATATGTTATAAGAAACTTCATCTTTATGGGACGTGTTGAACACATTTCGAGCAGAACGAAAGCAACCACATTTCGCATACATGTCGGTCAGAGCATTGGTTACAAACAAATCAGATGTTAGTCCTAAACGAACGCCCATGGCATGTATTTCTTTGCCAGGACCAAGGTGACCCAAACGTGCACAAGCAGGAAGAACATTGGTAAAGGTCACTGCATTAGGGCGTTCTCCACTCTCTTGCAATAGTATTACAAATCTTATTGCTTCCAACGCGACCCCATTTAGCGCATAATTAGCGATCATAGTGTTCCAAGAAACTATATTCCTTCTATCCATGCTGTGGAATATGCTAGATGCCTCAGTTGAATGACCAGACTTGGCATACATATCGATCAGGGAATTGGCAGTGAAAAGATCAGTTTCTGTTCCCATTCTCATACTGAACCCATGAATTTCTTTTCCTGCTTTGAAACATTCAAGCTCAACAAACACAGGAAGAATGCTCGAAATGGTGACCGAGTTCGGTTTAGTTCCTGCATCGATCATCGTCCTAAAAACATCCAAGGCATCCCAGAAATGACCCTTAAAAGTTAGACCATTGATGATTGAATTCCATGAGACTTCATTCTTCTCAATTATCTCATCAAAAACTTGCCATGAAGCTTTCACACTCCCACATTTCCCATACGCATCGACAAGTGCATTGCAAGAGGTTACCAAAGAATCCAAACCAACTTTCACAATGTAACAATGAATTCGTCTTGTCATCTCCTCGTCTTCAAGGCCAGCAGAAATCGGCAAAAGACTGATAACACTCACCAAATTTGGTTGAATTCCGGACCTCAAAGTCATCCAAAAGTAATAGTTACGAGCCTCCCTATAATCCCCATTAACTGAAAGGAGCCCAATAACCGTATTCCACGAGACGACATCTCTCTCAGACATTTCATCGAACACCTTCGTAGCATCATTTAAGAACCCACAATTCCCATACAGCATCAGCAGCGTATTGCCAACATAGACATCAGAATCAAAACCCAACTTAAACACAACCCCATGAACCTCCATACCTTTGCAAATATCAAGCGAATCAGAACATATCTTGAGAACAAAAGGAAATGTATGGTCATCGAGTTGAACACCGAGTCGAACCATCCTGTTGTACGTCTGCAACCCATCAAGCGTCCCATTCCACTTAATATCTGGACCTTGATAAAGGGAGGGGAGTTTAGAGTAATTAGAGGGGAAATGAAGGGTATATTAGAAAATATATATATATATATTTTTTGTTTGGAGGAAATAGTCGTCCACTAGAGACGGAAAGCTAAAACTAATCCAGAAATGTTAGGGAGGTTCTTATGGTTCACAGTGGGCCCCATCACCCAATATAATCCCTACCTTCTCCATGCAATTCAACGTACTCATCCACCCATCCTTATTTTAAAAATAAAATAAATCCCTTCAAGAAAACAACAGAAATATGAACATTCCTCTCACAACATTGCTCATCTTCCTCGCAGCTTTTGCACCCATCTCTTCTGCTACAACAGAGGTTCCTGCAGAGAAGTCGCAGTTAGAAGCTTGGTTTTCCGGGCATGTGAAGCCCTTAGCCGACCGCAAGGCCGAGCTTGATCCCGCCCTTGTGGCCGCTGAAGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATTGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCGAAATTGACATTTGATGGAGATGCCAAAAAATACGGTACCGTTTACAGTGGAACTTTGACCGTGGAGGCTGATTATTTTGTTGCTGCCAATCTGGTGCTCGAGGTAATTTGTGAATTAAATGCGAACACTTCTCCTTCTTCTGATCAATTTTTGAATAAAAAACAGAACACTTCTCCTTCTGATCAATTTTTGAATGAATAAAAACAGAACACTTCTCCAAGACCGCATGCCGGAAAAGGAGGTCCGGCATTGGCAGCGAGAATCAGAGGGAATAAAGCCGCAGTTTACAATTGCAAATTCATAGGGTTCCAAGACACCCTGTGCGACGACGACGGGCTGCATGTGTACAAGGATTGCTTCATTGAAGGCACCGTGGACTTCATCTTCGGGAAGGCAACGGCCCTGTATTTGAACAGTCAGCTGAATGTGGTGGGAGTCGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGATATGTGTTTGCGCATTGCAGCATTACAGGCACTGGCGGGCCGAACACTTATTTGGGAAGATCTTGGAGGCCCTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTTGGAGAATACAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTATAAAATTCAGCAGACAGCTGAGTGAAGCACAAGCAAAACCCTTCATCAACCTTGATTACGTGCAGGCTCAAAAGTGGCTGCTTCCTCCTCCCAAACTATAGGCTTTCATAGTTGCAGGGAGAGTGGCAGTATTCGATCGAGTGGCAGTATTCGATCGAGTGGCAGTATTCTCACATACACCAAATACCTCTCCGCAACCGCAATCGATCGGGTTGATCATTAATTACCTCATTCACATTCTTTCTTTTTTCCCCTTTTACAATATCGTTTCCCATGACCTTATTCTCAATTATTGTCGTCAAATTATACGACATCGTATTGTAGTATGATAGACAGTTTTGTTTGAGAATAATATATGGATCATTTTACTTAATTGGTATGTTTTTCATTACATTTTGAACAGAGACATAAAACTATCACTATAAAACTAAGATTAAAACTAAGATTAAAAGAGTACATAAAAAAATTTAAAATCAATACAAAAATTGATAGGTAAATTTTAGACCT

mRNA sequence

ATGGGCACTAGAAACTTATATTATCCTCATGGTCCCATCATATTGTATTTTCGGCCCATACTTAAGATCCAACTCGGCCCAATAAGAAAAGGGGATAGGCCCAATAAGAAAGGGGGAATAGGCCCAAACTATAGCGGCCGACTTGAGGGGCCCGGCCCAACCGTCGTCTCCAAAATCTTCTTCTTCTCTCTGTTTACCAGCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGATGGCAGCAATGAATTGGCCGTAGTTGAATACATGGATGAGATCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGGTGTGTTTCTCGAGAGCTACGAAATAGTCTTCCACCAGATACGGAAAGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATAGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCAAAATTGACATTCGATGGAGATTCCAAAAAATACGGCACCGTGTACAGTGGAACTTTGACCGTCGAGGCTGAGTATTTTGTTGCTGCCAATCTCGTGATCGAGAACACTTCTCCAAGACCGGATGCGAGAAAAGGAGGTCCGGCACTGGCGGCGAGAATCAGAGGGAATAAAGCCGCAATTTACAATTGCAAATTCCTAGGGTTCCAAGACACCCTGTGCGACGACGACGGGATGCATGTGTACAAGGATTGCATCATTGAAGGCACTGTGGACTTCATCTTCGGGAAGGCAACGTCCCTGTATTTGAACAGTCAGCTGAATGTGCTGGGAGAAGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGGTATGTGTTTGCGCATTGCAGCGTTACAGGCACTGGCGGGCCGAACACTTATTTGGCAAGATCCTGGAGGCCTTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTCGGAGAATTTAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTGTAAAATTCAGCAAACAGCTGAGTGAAGCACAAGCGAAACCCTTCATCAACCTTGATTACGTGCAGGCCCAAAATATCCACAATGCTGAGGCTTTAGCTCAAATAAATGCTCTGCTGCCTTACACCCTAGTTCAACGTTTCCGTAAATTCGACAAGCACCAAGTAGAGCTCCCCAAATATTTGAATCGGGCGCTATCGGTAGTCGCCGAATCAGCTCTGCTGCCTCTTCTACGAAACCAGCACGGCCGAGTAGATCAACCAGACATGTATAGTGCATTTCGGTTTGCACAAGCTGATATGACCCCCATAAAGGAAACGACATCAGGCTTTTTACCAAGCAGCCTCATTTCTGAGAACAAATTCAGAGACTCCAAGCAATCGTTTGTTTCAGAATATCCTCATCAGCAGCGTATTGCCAACATAGACATCAGAATCAAAACCCAACTTAAACACAACCCCATGAACCTCCATACCTTTGCAAATATCAAGCGAATCAGAACATATCTTGAGAACAAAAGGAAATGTATGGTCATCGAGTTGAACACCGAGTCGAACCATCCTGTTGTACGTCTGCAACCCATCAAGCGTCCCATTCCACTTAATATCTGGACCTTGATAAAGGGAGGGGAGTTTAGAGTAATTAGAGGGGAAATGAAGGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATTGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCGAAATTGACATTTGATGGAGATGCCAAAAAATACGGTACCGTTTACAGTGGAACTTTGACCGTGGAGGCTGATTATTTTGTTGCTGCCAATCTGGTGCTCGAGAACACTTCTCCAAGACCGCATGCCGGAAAAGGAGGTCCGGCATTGGCAGCGAGAATCAGAGGGAATAAAGCCGCAGTTTACAATTGCAAATTCATAGGGTTCCAAGACACCCTGTGCGACGACGACGGGCTGCATGTGTACAAGGATTGCTTCATTGAAGGCACCGTGGACTTCATCTTCGGGAAGGCAACGGCCCTGTATTTGAACAGTCAGCTGAATGTGGTGGGAGTCGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGATATGTGTTTGCGCATTGCAGCATTACAGGCACTGGCGGGCCGAACACTTATTTGGGAAGATCTTGGAGGCCCTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTTGGAGAATACAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTATAAAATTCAGCAGACAGCTGAGTGAAGCACAAGCAAAACCCTTCATCAACCTTGATTACGTGCAGGCTCAAAAGTGGCTGCTTCCTCCTCCCAAACTATAGGCTTTCATAGTTGCAGGGAGAGTGGCAGTATTCGATCGAGTGGCAGTATTCGATCGAGTGGCAGTATTCTCACATACACCAAATACCTCTCCGCAACCGCAATCGATCGGGTTGATCATTAATTACCTCATTCACATTCTTTCTTTTTTCCCCTTTTACAATATCGTTTCCCATGACCTTATTCTCAATTATTGTCGTCAAATTATACGACATCGTATTGTAGTATGATAGACAGTTTTGTTTGAGAATAATATATGGATCATTTTACTTAATTGGTATGTTTTTCATTACATTTTGAACAGAGACATAAAACTATCACTATAAAACTAAGATTAAAACTAAGATTAAAAGAGTACATAAAAAAATTTAAAATCAATACAAAAATTGATAGGTAAATTTTAGACCT

Coding sequence (CDS)

ATGGGCACTAGAAACTTATATTATCCTCATGGTCCCATCATATTGTATTTTCGGCCCATACTTAAGATCCAACTCGGCCCAATAAGAAAAGGGGATAGGCCCAATAAGAAAGGGGGAATAGGCCCAAACTATAGCGGCCGACTTGAGGGGCCCGGCCCAACCGTCGTCTCCAAAATCTTCTTCTTCTCTCTGTTTACCAGCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGATGGCAGCAATGAATTGGCCGTAGTTGAATACATGGATGAGATCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGGTGTGTTTCTCGAGAGCTACGAAATAGTCTTCCACCAGATACGGAAAGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATAGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCAAAATTGACATTCGATGGAGATTCCAAAAAATACGGCACCGTGTACAGTGGAACTTTGACCGTCGAGGCTGAGTATTTTGTTGCTGCCAATCTCGTGATCGAGAACACTTCTCCAAGACCGGATGCGAGAAAAGGAGGTCCGGCACTGGCGGCGAGAATCAGAGGGAATAAAGCCGCAATTTACAATTGCAAATTCCTAGGGTTCCAAGACACCCTGTGCGACGACGACGGGATGCATGTGTACAAGGATTGCATCATTGAAGGCACTGTGGACTTCATCTTCGGGAAGGCAACGTCCCTGTATTTGAACAGTCAGCTGAATGTGCTGGGAGAAGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGGTATGTGTTTGCGCATTGCAGCGTTACAGGCACTGGCGGGCCGAACACTTATTTGGCAAGATCCTGGAGGCCTTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTCGGAGAATTTAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTGTAAAATTCAGCAAACAGCTGAGTGAAGCACAAGCGAAACCCTTCATCAACCTTGATTACGTGCAGGCCCAAAATATCCACAATGCTGAGGCTTTAGCTCAAATAAATGCTCTGCTGCCTTACACCCTAGTTCAACGTTTCCGTAAATTCGACAAGCACCAAGTAGAGCTCCCCAAATATTTGAATCGGGCGCTATCGGTAGTCGCCGAATCAGCTCTGCTGCCTCTTCTACGAAACCAGCACGGCCGAGTAGATCAACCAGACATGTATAGTGCATTTCGGTTTGCACAAGCTGATATGACCCCCATAAAGGAAACGACATCAGGCTTTTTACCAAGCAGCCTCATTTCTGAGAACAAATTCAGAGACTCCAAGCAATCGTTTGTTTCAGAATATCCTCATCAGCAGCGTATTGCCAACATAGACATCAGAATCAAAACCCAACTTAAACACAACCCCATGAACCTCCATACCTTTGCAAATATCAAGCGAATCAGAACATATCTTGAGAACAAAAGGAAATGTATGGTCATCGAGTTGAACACCGAGTCGAACCATCCTGTTGTACGTCTGCAACCCATCAAGCGTCCCATTCCACTTAATATCTGGACCTTGATAAAGGGAGGGGAGTTTAGAGTAATTAGAGGGGAAATGAAGGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATTGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCGAAATTGACATTTGATGGAGATGCCAAAAAATACGGTACCGTTTACAGTGGAACTTTGACCGTGGAGGCTGATTATTTTGTTGCTGCCAATCTGGTGCTCGAGAACACTTCTCCAAGACCGCATGCCGGAAAAGGAGGTCCGGCATTGGCAGCGAGAATCAGAGGGAATAAAGCCGCAGTTTACAATTGCAAATTCATAGGGTTCCAAGACACCCTGTGCGACGACGACGGGCTGCATGTGTACAAGGATTGCTTCATTGAAGGCACCGTGGACTTCATCTTCGGGAAGGCAACGGCCCTGTATTTGAACAGTCAGCTGAATGTGGTGGGAGTCGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGATATGTGTTTGCGCATTGCAGCATTACAGGCACTGGCGGGCCGAACACTTATTTGGGAAGATCTTGGAGGCCCTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTTGGAGAATACAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTATAAAATTCAGCAGACAGCTGAGTGAAGCACAAGCAAAACCCTTCATCAACCTTGATTACGTGCAGGCTCAAAAGTGGCTGCTTCCTCCTCCCAAACTATAG

Protein sequence

MGTRNLYYPHGPIILYFRPILKIQLGPIRKGDRPNKKGGIGPNYSGRLEGPGPTVVSKIFFFSLFTSVEGVLSGKEDWTARRAVVPQRQLRIRDGSNELAVVEYMDEIVEGVLSGKEDWTARRAVVPQRQLRIRGVFLESYEIVFHQIRKEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKNMPKLTFDGDSKKYGTVYSGTLTVEAEYFVAANLVIENTSPRPDARKGGPALAARIRGNKAAIYNCKFLGFQDTLCDDDGMHVYKDCIIEGTVDFIFGKATSLYLNSQLNVLGEGGLGVIAAHSREKEDDPSGYVFAHCSVTGTGGPNTYLARSWRPWSRVVFAYTTIADILHPEGWDDMNNPAFDKTVFFGEFKCSGPGAETSKRVKFSKQLSEAQAKPFINLDYVQAQNIHNAEALAQINALLPYTLVQRFRKFDKHQVELPKYLNRALSVVAESALLPLLRNQHGRVDQPDMYSAFRFAQADMTPIKETTSGFLPSSLISENKFRDSKQSFVSEYPHQQRIANIDIRIKTQLKHNPMNLHTFANIKRIRTYLENKRKCMVIELNTESNHPVVRLQPIKRPIPLNIWTLIKGGEFRVIRGEMKEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPKL

Homology

[Close]

BLAST of Cp4.1LG16g08470 vs. Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.5e-97
Identity = 165/299 (55.18%), Postives = 220/299 (73.58%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           ++ V   G G+FKT+T+AI SVPAGNTKRV+I +  G YKEK+TI+RN+PFITL G P  
Sbjct: 66  IINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAARIRGNK 762
           MP +T+DG A KYGTV S +L + +DYF+A N+V++NT+P P    KG  AL+ RI GN 
Sbjct: 126 MPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNF 185

Query: 763 AAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVI 822
           AA YNCKF GFQDT+CDD G H +KDC++EGT DFIFG  T++YL +QL+VVG  G+ VI
Sbjct: 186 AAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVG-DGIRVI 245

Query: 823 AAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDM 882
           AAH+ +  ++ SGY F HC +TGTGG   YLGR+W    +VV+AYT +  +++P GW + 
Sbjct: 246 AAHAGKSAEEKSGYSFVHCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQEN 305

Query: 883 NNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPKL 941
             PA DKTVF+GEYKCSGPG+  +KR+ F++ + + +A  F++L Y+Q  KWLLPPP L
Sbjct: 306 KTPAHDKTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPPAL 361

[Close]

BLAST of Cp4.1LG16g08470 vs. Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 356.7 bits (914), Expect = 7.9e-97
Identity = 164/299 (54.85%), Postives = 220/299 (73.58%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           ++ V   G G+FKT+T+AI SVPAGNTKRV+I +  G Y+EK+TI+RN+PFITL G P  
Sbjct: 66  IINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAARIRGNK 762
           MP +T+DG A KYGTV S +L + +DYF+A N+V++NT+P P    KG  AL+ RI GN 
Sbjct: 126 MPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNF 185

Query: 763 AAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVI 822
           AA YNCKF GFQDT+CDD G H +KDC++EGT DFIFG  T++YL +QL+VVG  G+ VI
Sbjct: 186 AAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVG-DGIRVI 245

Query: 823 AAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDM 882
           AAH+ +  ++ SGY F HC +TGTGG   YLGR+W    +VV+AYT +  +++P GW + 
Sbjct: 246 AAHAGKSAEEKSGYSFVHCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQEN 305

Query: 883 NNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPKL 941
             PA DKTVF+GEYKCSGPG+  +KR+ F++ + + +A  F++L Y+Q  KWLLPPP L
Sbjct: 306 KTPAHDKTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWLLPPPAL 361

[Close]

BLAST of Cp4.1LG16g08470 vs. Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-96
Identity = 166/294 (56.46%), Postives = 215/294 (73.13%), Query Frame = 1


Query: 646 VRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKNMPK 705
           V+ +G G FKT+TEAI SV AGNT+RV+I IG GVYKEK+TI+R++PFITLYG P  MP 
Sbjct: 45  VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPV 104

Query: 706 LTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAARIRGNKAAV 765
           LTFDG A +YGTV S TL V +DYF+A N++L+N++P P    KG  AL+ RI GNKAA 
Sbjct: 105 LTFDGTAAQYGTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAF 164

Query: 766 YNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIAAH 825
           YNCKF G+QDT+CDD G H +KDC+IEGT DFIFG   +LYL +QLNVVG  G+ VI AH
Sbjct: 165 YNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVG-DGIRVITAH 224

Query: 826 SREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMNNP 885
           + +   + SGY F HC +TGT G   YLGRSW    +VV+AYT ++ +++P GW +    
Sbjct: 225 AGKSAAEKSGYSFVHCKVTGT-GTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREA 284

Query: 886 AFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
             DKTVF+GEYKC+G G+   KR+K+++ + + +AK FI+L Y+Q   WLLPPP
Sbjct: 285 GRDKTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWLLPPP 336

[Close]

BLAST of Cp4.1LG16g08470 vs. Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.5e-87
Identity = 150/297 (50.51%), Postives = 201/297 (67.68%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           ++ V   G  +FKT+ EAI S+P GN  RV+I +  GVY EK+TI+  +PFITL G P  
Sbjct: 66  IITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNKA 762
              LT+ G A +YGTV S TL V A+YF AA+L ++NT+P P  G  G ALA RI  +KA
Sbjct: 126 ETVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKA 185

Query: 763 AVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIA 822
           A Y+C+F GFQDTLCDD G H +KDC+IEGT DFIFG+  +LYLN+QL+ VG  GL VI 
Sbjct: 186 AFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVG-DGLRVIT 245

Query: 823 AHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMN 882
           A  R+   + +GY F HC +TGT G   YLGRSW    +VV+A+T +  +++P GW +  
Sbjct: 246 AQGRQSATEQNGYTFVHCKVTGT-GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENL 305

Query: 883 NPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPK 940
           N  +DKTVF+GEYKC GPG+   KR+ +++ + + +  PF+ L Y++   WLLPPPK
Sbjct: 306 NRGYDKTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWLLPPPK 360

[Close]

BLAST of Cp4.1LG16g08470 vs. Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.1e-85
Identity = 148/296 (50.00%), Postives = 200/296 (67.57%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           V+ V  +G GDFKT+  AI S+P  N  RV+I +  G+Y EK+T++  +P++TL G P  
Sbjct: 66  VIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNKA 762
              LT+ G A KYGTV S TL V A  F+AANL + NTSP P  G  G ALA RI G+KA
Sbjct: 126 ETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKA 185

Query: 763 AVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIA 822
           A YNC+F GFQDTLCDD G H +K+C+IEGT DFIFG+  +LYL +QL+ VG  GL VIA
Sbjct: 186 AFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAVG-DGLRVIA 245

Query: 823 AHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMN 882
           AH+R+   + +GY F HC +TG  G   YLGR+W    +VV++YT ++ +++P GW +  
Sbjct: 246 AHNRQSTTEQNGYSFVHCKVTGV-GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENR 305

Query: 883 NPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
             A DKTVF+GEY C+GPG+  +KR+  ++ +   +A  F+ L Y++  KWLLPPP
Sbjct: 306 VRAHDKTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLLPPP 359

[Close]

BLAST of Cp4.1LG16g08470 vs. TrEMBL
Match: A0A0A0KEH2_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_6G428030 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.0e-132
Identity = 224/303 (73.93%), Postives = 259/303 (85.48%), Query Frame = 1


Query: 638 KEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLY 697
           +E +TV+KV +DG+G+FKTVTEAIASVPA N KRVVIWIG GVYKEKL I+RN+PF+TLY
Sbjct: 64  EENATVIKVMSDGTGNFKTVTEAIASVPADNKKRVVIWIGVGVYKEKLKIDRNKPFVTLY 123

Query: 698 GS-PKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAA 757
           GS PKNMPKLTFDGDA KYGTVYS TL VEADYF AANL++EN+SPRP    KG  ALAA
Sbjct: 124 GSDPKNMPKLTFDGDAAKYGTVYSATLIVEADYFTAANLIIENSSPRPDGVRKGAQALAA 183

Query: 758 RIRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGV 817
           R  G KAA+YNCKF+GFQDTLCDDDGLH YKDCFI+GTVDFIFGK T+LYLN+QL+V G 
Sbjct: 184 RFMGTKAAIYNCKFLGFQDTLCDDDGLHFYKDCFIQGTVDFIFGKGTSLYLNTQLDVAGD 243

Query: 818 GGLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHP 877
           GGL VI AHSRE+E D SGY F HCSITGTGG NTYLGR+W P SRVVFAYTTIADI+HP
Sbjct: 244 GGLAVITAHSREQEADTSGYSFVHCSITGTGGKNTYLGRAWMPRSRVVFAYTTIADIIHP 303

Query: 878 EGWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLL 937
           EGW+DM +  FDKTV FGEYKCSGPGA ++ R+ + +QL++ + KPF+ L+YVQ++KWLL
Sbjct: 304 EGWNDMKHAGFDKTVMFGEYKCSGPGAVSTGRVAYGKQLTDVEVKPFLGLEYVQSEKWLL 363

Query: 938 PPP 939
           PPP
Sbjct: 364 PPP 366

[Close]

BLAST of Cp4.1LG16g08470 vs. TrEMBL
Match: A0A0A0KEY2_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_6G428540 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 220/302 (72.85%), Postives = 260/302 (86.09%), Query Frame = 1


Query: 638 KEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLY 697
           +E +TV+KVR DGSGDFKT+TEAI SVPA NTKRVVIWIG GVYKEKL I+RN+PF+TLY
Sbjct: 65  EENATVIKVRGDGSGDFKTITEAIESVPACNTKRVVIWIGGGVYKEKLKIDRNKPFVTLY 124

Query: 698 GSPKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAG-KGGPALAAR 757
           GSP NMP LTFDGDA KYGTVYS TLTVEADYF AANL++EN+SPRP    KG  ALAAR
Sbjct: 125 GSPNNMPNLTFDGDASKYGTVYSATLTVEADYFTAANLIIENSSPRPDGKRKGEQALAAR 184

Query: 758 IRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVG 817
           I GNK A+YNCKFIGFQDTLCDD GLH+YKDCFI+GTVDFIFG  T+LYLN+QL+VV  G
Sbjct: 185 IWGNKVAIYNCKFIGFQDTLCDDRGLHLYKDCFIQGTVDFIFGGGTSLYLNTQLDVVVDG 244

Query: 818 GLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPE 877
           GLGVIAAHSRE+E + SG+ F HCSITGTGG NTYLGR+WRP SRVVFAYTT+ADI+HP+
Sbjct: 245 GLGVIAAHSREQESECSGFSFVHCSITGTGGRNTYLGRAWRPRSRVVFAYTTMADIIHPK 304

Query: 878 GWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLP 937
           GW+DM+N  +DKTV FGEYKCSG G+  SKR+++ +QLS+ + + F++L+Y+++  WLLP
Sbjct: 305 GWNDMDNFGYDKTVSFGEYKCSGLGSNFSKRVQYGKQLSDEKVQQFVSLEYLKSDTWLLP 364

Query: 938 PP 939
           PP
Sbjct: 365 PP 366

[Close]

BLAST of Cp4.1LG16g08470 vs. TrEMBL
Match: A0A0A0KI78_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_6G428290 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 5.6e-126
Identity = 211/297 (71.04%), Postives = 252/297 (84.85%), Query Frame = 1


Query: 642 TVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPK 701
           T+VKV +DG+GDFKTVTEAIASVP  N  RVVIWIGEGVYKEKLTIE+N+PFITL G+PK
Sbjct: 69  TIVKVMSDGTGDFKTVTEAIASVPVNNKNRVVIWIGEGVYKEKLTIEKNKPFITLCGTPK 128

Query: 702 NMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNK 761
           N+P LTFDG A KYGTVYS TL VEADYFVAANL++ENTSPRP+  K   ALAAR RG K
Sbjct: 129 NVPTLTFDGVASKYGTVYSATLIVEADYFVAANLIIENTSPRPNGRKEAQALAARFRGTK 188

Query: 762 AAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVI 821
           +A YNCKF+GFQDTLCDDDGLH+YKDCFI+GTVDF+FGK T+LYLN++LNVVG G   VI
Sbjct: 189 SAFYNCKFLGFQDTLCDDDGLHLYKDCFIQGTVDFVFGKGTSLYLNTELNVVGEGQFAVI 248

Query: 822 AAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDM 881
            AHSRE+E D SGY F HCSITG  G +T+LGR+W P SRV+FAYT++ DI+HPEGW+DM
Sbjct: 249 TAHSREQEADASGYSFVHCSITG-NGKDTFLGRAWMPRSRVIFAYTSMIDIIHPEGWNDM 308

Query: 882 NNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
            +  FDKTV FGEYKCSGPGA ++ R+ + +QL+EA+ KP+++L++VQ+ KWLLPPP
Sbjct: 309 KHAGFDKTVMFGEYKCSGPGAVSTGRVAYGKQLTEAEVKPYLSLEFVQSAKWLLPPP 364

[Close]

BLAST of Cp4.1LG16g08470 vs. TrEMBL
Match: A0A0A0KJZ4_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_6G428040 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 9.6e-126
Identity = 210/297 (70.71%), Postives = 251/297 (84.51%), Query Frame = 1


Query: 642 TVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPK 701
           T+VKV  DG+GDFKT+TEAIASVP  N  RVVIWIGEGVYKEKLTIE+N+PFITL G+PK
Sbjct: 40  TIVKVMGDGTGDFKTITEAIASVPVNNKNRVVIWIGEGVYKEKLTIEKNKPFITLCGTPK 99

Query: 702 NMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNK 761
           N+P L+FDG A KYGTVYS TL VEADYFVAANL++ENTSPRP+  K   ALAAR RG K
Sbjct: 100 NVPTLSFDGVASKYGTVYSATLIVEADYFVAANLIIENTSPRPNGRKEAQALAARFRGTK 159

Query: 762 AAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVI 821
           +A YNCKF+GFQDTLCDDDGLH+YKDCFI+GTVDF+FGK T+LYLN++LNVVG G   VI
Sbjct: 160 SAFYNCKFLGFQDTLCDDDGLHLYKDCFIQGTVDFVFGKGTSLYLNTELNVVGEGQFAVI 219

Query: 822 AAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDM 881
            AHSRE+E D SGY F HCSITG  G +TYLGR+W P SRV+FAYT++ DI+HPEGW+DM
Sbjct: 220 TAHSREQEADASGYSFVHCSITG-NGKDTYLGRAWMPRSRVIFAYTSMIDIIHPEGWNDM 279

Query: 882 NNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
            +  FDKTV FGEYKCSGPGA ++ R+ + +QL+EA+ KP+++L++VQ+ KWLLPPP
Sbjct: 280 KHAGFDKTVMFGEYKCSGPGAVSTGRVAYGKQLTEAEVKPYLSLEFVQSAKWLLPPP 335

[Close]

BLAST of Cp4.1LG16g08470 vs. TrEMBL
Match: M5WU84_PRUPE (Pectinesterase OS=Prunus persica GN=PRUPE_ppa007761mg PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.0e-107
Identity = 180/300 (60.00%), Postives = 235/300 (78.33%), Query Frame = 1


Query: 640 GSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGS 699
           G TV+KV  DGSG FKT+T+AI S+PA NTKRV+++IGEG Y+EK+TI RN+PF+T YGS
Sbjct: 54  GQTVIKVMKDGSGQFKTITDAINSIPADNTKRVIVYIGEGEYEEKITIPRNKPFVTFYGS 113

Query: 700 PKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAARIR 759
           P NMP LTF G A+KYGTV S T+ VE+DYF+AAN++++N+SPRP     G  A+A R+ 
Sbjct: 114 PTNMPTLTFTGTAQKYGTVNSATVIVESDYFMAANVIIKNSSPRPDGKAVGAQAVALRVS 173

Query: 760 GNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGL 819
           GNK+A+YNCK IGFQDTLCDD G H +KDCFIEGTVDFI+G   +LYLN++L+VVG  GL
Sbjct: 174 GNKSALYNCKLIGFQDTLCDDKGNHFFKDCFIEGTVDFIWGSGKSLYLNNELHVVGDNGL 233

Query: 820 GVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGW 879
            VI A +R+   D +GY FAHC+ITGTG   TYLGR+WR    VVFAYT+++ +++P GW
Sbjct: 234 TVITAQARDSASDDTGYSFAHCNITGTGN-GTYLGRAWRISPMVVFAYTSMSKVINPAGW 293

Query: 880 DDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
            + N+P  D TVF+GEYKCSGPG+  + R+K+ + +++ Q KPF++LDY+Q  KWLLPPP
Sbjct: 294 SNDNHPERDNTVFYGEYKCSGPGSSVAGRVKYIKHMTDEQIKPFLSLDYIQGSKWLLPPP 352

[Close]

BLAST of Cp4.1LG16g08470 vs. TAIR10
Match: AT1G69940.1 (AT1G69940.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-98
Identity = 165/299 (55.18%), Postives = 220/299 (73.58%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           ++ V   G G+FKT+T+AI SVPAGNTKRV+I +  G YKEK+TI+RN+PFITL G P  
Sbjct: 66  IINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAARIRGNK 762
           MP +T+DG A KYGTV S +L + +DYF+A N+V++NT+P P    KG  AL+ RI GN 
Sbjct: 126 MPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNF 185

Query: 763 AAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVI 822
           AA YNCKF GFQDT+CDD G H +KDC++EGT DFIFG  T++YL +QL+VVG  G+ VI
Sbjct: 186 AAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVG-DGIRVI 245

Query: 823 AAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDM 882
           AAH+ +  ++ SGY F HC +TGTGG   YLGR+W    +VV+AYT +  +++P GW + 
Sbjct: 246 AAHAGKSAEEKSGYSFVHCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQEN 305

Query: 883 NNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPKL 941
             PA DKTVF+GEYKCSGPG+  +KR+ F++ + + +A  F++L Y+Q  KWLLPPP L
Sbjct: 306 KTPAHDKTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPPAL 361

[Close]

BLAST of Cp4.1LG16g08470 vs. TAIR10
Match: AT5G07410.1 (AT5G07410.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 356.7 bits (914), Expect = 4.4e-98
Identity = 164/299 (54.85%), Postives = 220/299 (73.58%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           ++ V   G G+FKT+T+AI SVPAGNTKRV+I +  G Y+EK+TI+RN+PFITL G P  
Sbjct: 66  IINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAARIRGNK 762
           MP +T+DG A KYGTV S +L + +DYF+A N+V++NT+P P    KG  AL+ RI GN 
Sbjct: 126 MPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNF 185

Query: 763 AAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVI 822
           AA YNCKF GFQDT+CDD G H +KDC++EGT DFIFG  T++YL +QL+VVG  G+ VI
Sbjct: 186 AAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVG-DGIRVI 245

Query: 823 AAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDM 882
           AAH+ +  ++ SGY F HC +TGTGG   YLGR+W    +VV+AYT +  +++P GW + 
Sbjct: 246 AAHAGKSAEEKSGYSFVHCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQEN 305

Query: 883 NNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPKL 941
             PA DKTVF+GEYKCSGPG+  +KR+ F++ + + +A  F++L Y+Q  KWLLPPP L
Sbjct: 306 KTPAHDKTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWLLPPPAL 361

[Close]

BLAST of Cp4.1LG16g08470 vs. TAIR10
Match: AT5G61680.1 (AT5G61680.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 354.8 bits (909), Expect = 1.7e-97
Identity = 166/294 (56.46%), Postives = 215/294 (73.13%), Query Frame = 1


Query: 646 VRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKNMPK 705
           V+ +G G FKT+TEAI SV AGNT+RV+I IG GVYKEK+TI+R++PFITLYG P  MP 
Sbjct: 45  VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPV 104

Query: 706 LTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAARIRGNKAAV 765
           LTFDG A +YGTV S TL V +DYF+A N++L+N++P P    KG  AL+ RI GNKAA 
Sbjct: 105 LTFDGTAAQYGTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAF 164

Query: 766 YNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIAAH 825
           YNCKF G+QDT+CDD G H +KDC+IEGT DFIFG   +LYL +QLNVVG  G+ VI AH
Sbjct: 165 YNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVG-DGIRVITAH 224

Query: 826 SREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMNNP 885
           + +   + SGY F HC +TGT G   YLGRSW    +VV+AYT ++ +++P GW +    
Sbjct: 225 AGKSAAEKSGYSFVHCKVTGT-GTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREA 284

Query: 886 AFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
             DKTVF+GEYKC+G G+   KR+K+++ + + +AK FI+L Y+Q   WLLPPP
Sbjct: 285 GRDKTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWLLPPP 336

[Close]

BLAST of Cp4.1LG16g08470 vs. TAIR10
Match: AT5G07430.1 (AT5G07430.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 325.1 bits (832), Expect = 1.4e-88
Identity = 150/297 (50.51%), Postives = 201/297 (67.68%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           ++ V   G  +FKT+ EAI S+P GN  RV+I +  GVY EK+TI+  +PFITL G P  
Sbjct: 66  IITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNKA 762
              LT+ G A +YGTV S TL V A+YF AA+L ++NT+P P  G  G ALA RI  +KA
Sbjct: 126 ETVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKA 185

Query: 763 AVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIA 822
           A Y+C+F GFQDTLCDD G H +KDC+IEGT DFIFG+  +LYLN+QL+ VG  GL VI 
Sbjct: 186 AFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVG-DGLRVIT 245

Query: 823 AHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMN 882
           A  R+   + +GY F HC +TGT G   YLGRSW    +VV+A+T +  +++P GW +  
Sbjct: 246 AQGRQSATEQNGYTFVHCKVTGT-GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENL 305

Query: 883 NPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPK 940
           N  +DKTVF+GEYKC GPG+   KR+ +++ + + +  PF+ L Y++   WLLPPPK
Sbjct: 306 NRGYDKTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWLLPPPK 360

[Close]

BLAST of Cp4.1LG16g08470 vs. TAIR10
Match: AT5G07420.1 (AT5G07420.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 319.7 bits (818), Expect = 6.0e-87
Identity = 148/296 (50.00%), Postives = 200/296 (67.57%), Query Frame = 1


Query: 643 VVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKN 702
           V+ V  +G GDFKT+  AI S+P  N  RV+I +  G+Y EK+T++  +P++TL G P  
Sbjct: 66  VIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGA 125

Query: 703 MPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNKA 762
              LT+ G A KYGTV S TL V A  F+AANL + NTSP P  G  G ALA RI G+KA
Sbjct: 126 ETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKA 185

Query: 763 AVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIA 822
           A YNC+F GFQDTLCDD G H +K+C+IEGT DFIFG+  +LYL +QL+ VG  GL VIA
Sbjct: 186 AFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAVG-DGLRVIA 245

Query: 823 AHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMN 882
           AH+R+   + +GY F HC +TG  G   YLGR+W    +VV++YT ++ +++P GW +  
Sbjct: 246 AHNRQSTTEQNGYSFVHCKVTGV-GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENR 305

Query: 883 NPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
             A DKTVF+GEY C+GPG+  +KR+  ++ +   +A  F+ L Y++  KWLLPPP
Sbjct: 306 VRAHDKTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLLPPP 359

[Close]

BLAST of Cp4.1LG16g08470 vs. NCBI nr
Match: gi|659097432|ref|XP_008449623.1| (PREDICTED: putative pectinesterase 63 [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 1.2e-137
Identity = 230/302 (76.16%), Postives = 267/302 (88.41%), Query Frame = 1


Query: 638 KEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLY 697
           +E +TV+KVR DGSGDFKT+ EAI SVP GNTKR+VIWIG GVYKEKL I+RN+PF+TLY
Sbjct: 64  EESATVIKVRGDGSGDFKTIAEAIESVPIGNTKRIVIWIGGGVYKEKLKIDRNKPFVTLY 123

Query: 698 GSPKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAAR 757
           GSP NMP LTFDGDA KYGTVYS TL VEADYF AANLV+EN+SPRP    KG  ALAAR
Sbjct: 124 GSPNNMPNLTFDGDASKYGTVYSATLIVEADYFTAANLVIENSSPRPDGVRKGAQALAAR 183

Query: 758 IRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVG 817
           IRGNKAA+YNCKFIGFQDTLCDDDGLH+YKDCFI+GTVDFIFGK T+LYLN+QL+VVG G
Sbjct: 184 IRGNKAAIYNCKFIGFQDTLCDDDGLHLYKDCFIQGTVDFIFGKGTSLYLNTQLDVVGNG 243

Query: 818 GLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPE 877
           GLGVIAAHSR++E D SGY F HCSITGTGG NTYLGR+WRP SRVVFAYTT+ADI+HPE
Sbjct: 244 GLGVIAAHSRDQESDGSGYSFVHCSITGTGGRNTYLGRAWRPRSRVVFAYTTMADIIHPE 303

Query: 878 GWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLP 937
           GW+DMN+  +DKTV FGEYKC GPG+++S+R+K+S+QLS  + +PF++L YVQ++KWLLP
Sbjct: 304 GWNDMNHFGYDKTVLFGEYKCWGPGSKSSERVKYSKQLSYEEVEPFVSLGYVQSEKWLLP 363

Query: 938 PP 939
           PP
Sbjct: 364 PP 365

[Close]

BLAST of Cp4.1LG16g08470 vs. NCBI nr
Match: gi|778716816|ref|XP_011657599.1| (PREDICTED: putative pectinesterase 63 [Cucumis sativus])

HSP 1 Score: 480.7 bits (1236), Expect = 5.8e-132
Identity = 224/303 (73.93%), Postives = 259/303 (85.48%), Query Frame = 1


Query: 638 KEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLY 697
           +E +TV+KV +DG+G+FKTVTEAIASVPA N KRVVIWIG GVYKEKL I+RN+PF+TLY
Sbjct: 64  EENATVIKVMSDGTGNFKTVTEAIASVPADNKKRVVIWIGVGVYKEKLKIDRNKPFVTLY 123

Query: 698 GS-PKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAA 757
           GS PKNMPKLTFDGDA KYGTVYS TL VEADYF AANL++EN+SPRP    KG  ALAA
Sbjct: 124 GSDPKNMPKLTFDGDAAKYGTVYSATLIVEADYFTAANLIIENSSPRPDGVRKGAQALAA 183

Query: 758 RIRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGV 817
           R  G KAA+YNCKF+GFQDTLCDDDGLH YKDCFI+GTVDFIFGK T+LYLN+QL+V G 
Sbjct: 184 RFMGTKAAIYNCKFLGFQDTLCDDDGLHFYKDCFIQGTVDFIFGKGTSLYLNTQLDVAGD 243

Query: 818 GGLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHP 877
           GGL VI AHSRE+E D SGY F HCSITGTGG NTYLGR+W P SRVVFAYTTIADI+HP
Sbjct: 244 GGLAVITAHSREQEADTSGYSFVHCSITGTGGKNTYLGRAWMPRSRVVFAYTTIADIIHP 303

Query: 878 EGWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLL 937
           EGW+DM +  FDKTV FGEYKCSGPGA ++ R+ + +QL++ + KPF+ L+YVQ++KWLL
Sbjct: 304 EGWNDMKHAGFDKTVMFGEYKCSGPGAVSTGRVAYGKQLTDVEVKPFLGLEYVQSEKWLL 363

Query: 938 PPP 939
           PPP
Sbjct: 364 PPP 366

[Close]

BLAST of Cp4.1LG16g08470 vs. NCBI nr
Match: gi|659097434|ref|XP_008449624.1| (PREDICTED: pectinesterase PPME1-like [Cucumis melo])

HSP 1 Score: 472.6 bits (1215), Expect = 1.6e-129
Identity = 216/302 (71.52%), Postives = 258/302 (85.43%), Query Frame = 1


Query: 638 KEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLY 697
           +E +T++KV +DG+GDFKT+TEAIASVPA N KRV+I IG+G+YKEKL I+RN+PF+TLY
Sbjct: 63  EENATIIKVMSDGTGDFKTITEAIASVPADNKKRVMISIGDGIYKEKLKIDRNKPFVTLY 122

Query: 698 GSPKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHA-GKGGPALAAR 757
           GSPK MPKLTFDGDA K+GTVYS TL VEADYF AANLV+EN+SPRP    KG  ALAAR
Sbjct: 123 GSPKGMPKLTFDGDAAKFGTVYSATLIVEADYFTAANLVIENSSPRPDGVRKGAQALAAR 182

Query: 758 IRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVG 817
             G KAA+YNCKF GFQDTLCDDDGLH YKDCFI+GTVDFIFGK T+LY+N+QL+V G G
Sbjct: 183 FMGTKAAIYNCKFTGFQDTLCDDDGLHFYKDCFIQGTVDFIFGKGTSLYVNTQLDVAGDG 242

Query: 818 GLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPE 877
           GL VI AHSRE+E D SGY F HCSITGTGG NT+LGR+W P SRVVFAYTT+ADI+HPE
Sbjct: 243 GLAVITAHSREQESDGSGYSFVHCSITGTGGKNTFLGRAWMPRSRVVFAYTTMADIIHPE 302

Query: 878 GWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLP 937
           GW+DM +  FDKTV FGEYKCSGPG+ +++R+ + +QLS+A+  PF++L YVQ++KWLLP
Sbjct: 303 GWNDMKHAGFDKTVMFGEYKCSGPGSVSTERVPYGKQLSDAEVNPFLSLAYVQSEKWLLP 362

Query: 938 PP 939
           PP
Sbjct: 363 PP 364

[Close]

BLAST of Cp4.1LG16g08470 vs. NCBI nr
Match: gi|778722333|ref|XP_004140274.2| (PREDICTED: putative pectinesterase 63 [Cucumis sativus])

HSP 1 Score: 472.2 bits (1214), Expect = 2.1e-129
Identity = 220/302 (72.85%), Postives = 260/302 (86.09%), Query Frame = 1


Query: 638 KEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLY 697
           +E +TV+KVR DGSGDFKT+TEAI SVPA NTKRVVIWIG GVYKEKL I+RN+PF+TLY
Sbjct: 65  EENATVIKVRGDGSGDFKTITEAIESVPACNTKRVVIWIGGGVYKEKLKIDRNKPFVTLY 124

Query: 698 GSPKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAG-KGGPALAAR 757
           GSP NMP LTFDGDA KYGTVYS TLTVEADYF AANL++EN+SPRP    KG  ALAAR
Sbjct: 125 GSPNNMPNLTFDGDASKYGTVYSATLTVEADYFTAANLIIENSSPRPDGKRKGEQALAAR 184

Query: 758 IRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVG 817
           I GNK A+YNCKFIGFQDTLCDD GLH+YKDCFI+GTVDFIFG  T+LYLN+QL+VV  G
Sbjct: 185 IWGNKVAIYNCKFIGFQDTLCDDRGLHLYKDCFIQGTVDFIFGGGTSLYLNTQLDVVVDG 244

Query: 818 GLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPE 877
           GLGVIAAHSRE+E + SG+ F HCSITGTGG NTYLGR+WRP SRVVFAYTT+ADI+HP+
Sbjct: 245 GLGVIAAHSREQESECSGFSFVHCSITGTGGRNTYLGRAWRPRSRVVFAYTTMADIIHPK 304

Query: 878 GWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLP 937
           GW+DM+N  +DKTV FGEYKCSG G+  SKR+++ +QLS+ + + F++L+Y+++  WLLP
Sbjct: 305 GWNDMDNFGYDKTVSFGEYKCSGLGSNFSKRVQYGKQLSDEKVQQFVSLEYLKSDTWLLP 364

Query: 938 PP 939
           PP
Sbjct: 365 PP 366

[Close]

BLAST of Cp4.1LG16g08470 vs. NCBI nr
Match: gi|778716823|ref|XP_004140273.2| (PREDICTED: putative pectinesterase 63 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 8.1e-126
Identity = 211/297 (71.04%), Postives = 252/297 (84.85%), Query Frame = 1


Query: 642 TVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPK 701
           T+VKV +DG+GDFKTVTEAIASVP  N  RVVIWIGEGVYKEKLTIE+N+PFITL G+PK
Sbjct: 69  TIVKVMSDGTGDFKTVTEAIASVPVNNKNRVVIWIGEGVYKEKLTIEKNKPFITLCGTPK 128

Query: 702 NMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNK 761
           N+P LTFDG A KYGTVYS TL VEADYFVAANL++ENTSPRP+  K   ALAAR RG K
Sbjct: 129 NVPTLTFDGVASKYGTVYSATLIVEADYFVAANLIIENTSPRPNGRKEAQALAARFRGTK 188

Query: 762 AAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVI 821
           +A YNCKF+GFQDTLCDDDGLH+YKDCFI+GTVDF+FGK T+LYLN++LNVVG G   VI
Sbjct: 189 SAFYNCKFLGFQDTLCDDDGLHLYKDCFIQGTVDFVFGKGTSLYLNTELNVVGEGQFAVI 248

Query: 822 AAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDM 881
            AHSRE+E D SGY F HCSITG  G +T+LGR+W P SRV+FAYT++ DI+HPEGW+DM
Sbjct: 249 TAHSREQEADASGYSFVHCSITG-NGKDTFLGRAWMPRSRVIFAYTSMIDIIHPEGWNDM 308

Query: 882 NNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPP 939
            +  FDKTV FGEYKCSGPGA ++ R+ + +QL+EA+ KP+++L++VQ+ KWLLPPP
Sbjct: 309 KHAGFDKTVMFGEYKCSGPGAVSTGRVAYGKQLTEAEVKPYLSLEFVQSAKWLLPPP 364

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g08470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPME1_ARATH	3.5e-97	55.18	Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1	[more]
PME48_ARATH	7.9e-97	54.85	Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2	[more]
PME63_ARATH	3.0e-96	56.46	Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2	[more]
PME50_ARATH	2.5e-87	50.51	Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1	[more]
PME49_ARATH	1.1e-85	50.00	Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g08470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEH2_CUCSA	4.0e-132	73.93	Pectinesterase OS=Cucumis sativus GN=Csa_6G428030 PE=4 SV=1	[more]
A0A0A0KEY2_CUCSA	1.4e-129	72.85	Pectinesterase OS=Cucumis sativus GN=Csa_6G428540 PE=4 SV=1	[more]
A0A0A0KI78_CUCSA	5.6e-126	71.04	Pectinesterase OS=Cucumis sativus GN=Csa_6G428290 PE=4 SV=1	[more]
A0A0A0KJZ4_CUCSA	9.6e-126	70.71	Pectinesterase OS=Cucumis sativus GN=Csa_6G428040 PE=4 SV=1	[more]
M5WU84_PRUPE	2.0e-107	60.00	Pectinesterase OS=Prunus persica GN=PRUPE_ppa007761mg PE=4 SV=1	[more]

BLAST of Cp4.1LG16g08470 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69940.1	2.0e-98	55.18	Pectin lyase-like superfamily protein	[more]
AT5G07410.1	4.4e-98	54.85	Pectin lyase-like superfamily protein	[more]
AT5G61680.1	1.7e-97	56.46	Pectin lyase-like superfamily protein	[more]
AT5G07430.1	1.4e-88	50.51	Pectin lyase-like superfamily protein	[more]
AT5G07420.1	6.0e-87	50.00	Pectin lyase-like superfamily protein	[more]

BLAST of Cp4.1LG16g08470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097432\|ref\|XP_008449623.1\|	1.2e-137	76.16	PREDICTED: putative pectinesterase 63 [Cucumis melo]	[more]
gi\|778716816\|ref\|XP_011657599.1\|	5.8e-132	73.93	PREDICTED: putative pectinesterase 63 [Cucumis sativus]	[more]
gi\|659097434\|ref\|XP_008449624.1\|	1.6e-129	71.52	PREDICTED: pectinesterase PPME1-like [Cucumis melo]	[more]
gi\|778722333\|ref\|XP_004140274.2\|	2.1e-129	72.85	PREDICTED: putative pectinesterase 63 [Cucumis sativus]	[more]
gi\|778716823\|ref\|XP_004140273.2\|	8.1e-126	71.04	PREDICTED: putative pectinesterase 63 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **INTERPRO**
Term	Definition
IPR012334	Pectin_lyas_fold
IPR011050	Pectin_lyase_fold/virulence
IPR000070	Pectinesterase_cat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0005618	cell wall
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g08470.1	Cp4.1LG16g08470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 644..929 score: 3.8E-60coord: 156..441 score: 6.5
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 642..934 score: 1.31E-74coord: 154..443 score: 4.08
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 642..935 score: 1.3E-99coord: 154..446 score: 5.1
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 639..940 score: 1.7E
None	No IPR available	PANTHER	PTHR31321:SF23	PECTINESTERASE PPME1-RELATED	coord: 639..940 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g08470	Cucsa.086750	Cucumber (Gy14) v1	cgycpeB0160
Cp4.1LG16g08470	CmaCh20G001280	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g08470	Cla008601	Watermelon (97103) v1	cpewmB287
Cp4.1LG16g08470	Csa6G428030	Cucumber (Chinese Long) v2	cpecuB281
Cp4.1LG16g08470	MELO3C014537	Melon (DHL92) v3.5.1	cpemeB278
Cp4.1LG16g08470	ClCG02G022610	Watermelon (Charleston Gray)	cpewcgB255
Cp4.1LG16g08470	CSPI06G23600	Wild cucumber (PI 183967)	cpecpiB283
Cp4.1LG16g08470	Lsi10G011150	Bottle gourd (USVL1VR-Ls)	cpelsiB227
Cp4.1LG16g08470	MELO3C031057.2	Melon (DHL92) v3.6.1	cpemedB324
Cp4.1LG16g08470	CsaV3_6G038740	Cucumber (Chinese Long) v3	cpecucB0348
Cp4.1LG16g08470	Bhi10G000171	Wax gourd	cpewgoB0354
Cp4.1LG16g08470	CsGy6G022920	Cucumber (Gy14) v2	cgybcpeB755

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g08470	Cucurbita pepo (Zucchini)	cpecpeB310
Cp4.1LG16g08470	Cucurbita maxima (Rimu)	cmacpeB627
Cp4.1LG16g08470	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g08470	Cucurbita moschata (Rifu)	cmocpeB576
Cp4.1LG16g08470	Melon (DHL92) v3.6.1	cpemedB323
Cp4.1LG16g08470	Silver-seed gourd	carcpeB1273