Cp4.1LG16g07480 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTCCATTTCATAACAAACTAAAATTTTGCGAGTCCCATTGGCGCGGTAAACAGAACGAACAACGGAGGAGCCATGGAGGATCACCGAAAACAGAACGCAGAACGGCTCCGGAAGAAGAGTAATAAGATCTCTCTCGAGGACTACCTCGATTTCTTCTCCTCCGACAAGCAACTATTCCTCCCTGTCGCTTATCTCAATCAGGTCCTGATCTACATTGTTTTTTTTTTTTTTTTTTTCTCACTGATTTCTCTANTTTTTTTTTTTTTGTTCTCACTGATTTCTCTATGACGATCTGTTTGGATTTCGTTTCGAACTACTTGCCTGTTGATTTTTTAACCGATGCTTCTGTTTAACTCGATGCGCAGATCATTCGCATGCATGGCTACATGAATATCAAAGGTCTGAAGGTGAGTTTGCCGAACCGATACGTTTGTTTAATTTGCTTGGTTGAAAATTAATCATAATAACCTTTGTTTGCATCTCTTACGCAATGTTCACCAATTGGTTTCTAGTTTGAACTTATTGCTTTGAAAAATTAGAGAACGTTTACTCAAATTGATTGAAATTCCTTATCAATTTTGTTCTATGTTTGGGACTTAATATGGATCCTCTGTTGTGCGTTCCAAATTAGAGAACGTTTACGTAATGTTCTAAATTAATTTAGCATAAAAGAGTGAGAAGAGTGCGGAAAATGAGATTAGAAAACGATGCTGCTCAGCAGCTGAAGTAATTTGATGTCTCCTCACTCCTAGTCTAATAGGAACCGATTAATTACATTCACATCCTCTCTCTCTTGCTTAGAATGTAGTGAAGGATGCCGTAGGTACAATTAATCTGGTCAATCTCTCTCGGTCCACACTCAAAGAGAGCATCTCATCATCCGCGTCCATTACGCTTGAGGACGTAATCTCGGACCTCAAAAACCTCGAATGGCAAGAATGCAGTGTGACATCTGTTCTGAATTTCAGTTCCTGGAATCAGAATAACTCCGATCCGAGTCCGGACCGCGAGGAGCCGACTAGTGCCTCAAAGAAGTCAGGAAAGAAATTACGAGTATCGAGTGAATGTTATAGTCAAGAAGTCGAGGCAGTTGATGGAGTCTCCTCGTCTTGTGCCTCGAAGAAGTCGGGAAGTGAATCTCAGAGTAAGAGAAAGAAAACAGCTGCTTAAAAGTGGTGAGAAAGATGGTTCACTTCACTTGATTTGGTACCTTCTTTTTGTTTTCTGTTTTACTGTAATGGAGTTAAATCAAATATGAAACTGTTCCTCAGTGATTTCTTCTTTTTCTGGGCAACAATGGTCGTTTCTGTTATTGTTCTACATTCGCGTCCTTTTGGAGTTTGGACTGGAGTAATCCTTGACTCTTCTGTTTAATCCTTCGACGCACAGCAGCAACAGGTGACTTCTGATCTCTGAATTGCCTTAAAATCTTTCGTTCCCTTTTGAAGATAGTTGTTAATAGATAAACCACTGGAAAAATCAGCAACACTGCAACATTGATGTACGGAAATACAGGATGGGCAGCGTTTGGACTGTTGGAGGCGGATTCCGCGGAGCTTTTTGAATCGGAGGCCTTGAT CAGTCCATTTCATAACAAACTAAAATTTTGCGAGTCCCATTGGCGCGGTAAACAGAACGAACAACGGAGGAGCCATGGAGGATCACCGAAAACAGAACGCAGAACGGCTCCGGAAGAAGAGTAATAAGATCTCTCTCGAGGACTACCTCGATTTCTTCTCCTCCGACAAGCAACTATTCCTCCCTGTCGCTTATCTCAATCAGATCATTCGCATGCATGGCTACATGAATATCAAAGGTCTGAAGAATGTAGTGAAGGATGCCGTAGGTACAATTAATCTGGTCAATCTCTCTCGGTCCACACTCAAAGAGAGCATCTCATCATCCGCGTCCATTACGCTTGAGGACGTAATCTCGGACCTCAAAAACCTCGAATGGCAAGAATGCAGTGTGACATCTGTTCTGAATTTCAGTTCCTGGAATCAGAATAACTCCGATCCGAGTCCGGACCGCGAGGAGCCGACTAGTGCCTCAAAGAAGTCAGGAAAGAAATTACGAGTATCGAGTGAATGTTATAGTCAAGAAGTCGAGGCAGTTGATGGAGTCTCCTCGTCTTGTGCCTCGAAGAAGTCGGGAAGTGAATCTCAGAGTAAGAGAAAGAAAACAGCTGCTTAAAAGTGGTGAGAAAGATGGTTCACTTCACTTGATTTGGTACCTTCTTTTTGTTTTCTGTTTTACTGTAATGGAGTTAAATCAAATATGAAACTGTTCCTCAGTGATTTCTTCTTTTTCTGGGCAACAATGGTCGTTTCTGTTATTGTTCTACATTCGCGTCCTTTTGGAGTTTGGACTGGAGTAATCCTTGACTCTTCTGTTTAATCCTTCGACGCACAGCAGCAACAGGTGACTTCTGATCTCTGAATTGCCTTAAAATCTTTCGTTCCCTTTTGAAGATAGTTGTTAATAGATAAACCACTGGAAAAATCAGCAACACTGCAACATTGATGTACGGAAATACAGGATGGGCAGCGTTTGGACTGTTGGAGGCGGATTCCGCGGAGCTTTTTGAATCGGAGGCCTTGAT ATGGAGGATCACCGAAAACAGAACGCAGAACGGCTCCGGAAGAAGAGTAATAAGATCTCTCTCGAGGACTACCTCGATTTCTTCTCCTCCGACAAGCAACTATTCCTCCCTGTCGCTTATCTCAATCAGATCATTCGCATGCATGGCTACATGAATATCAAAGGTCTGAAGAATGTAGTGAAGGATGCCGTAGGTACAATTAATCTGGTCAATCTCTCTCGGTCCACACTCAAAGAGAGCATCTCATCATCCGCGTCCATTACGCTTGAGGACGTAATCTCGGACCTCAAAAACCTCGAATGGCAAGAATGCAGTGTGACATCTGTTCTGAATTTCAGTTCCTGGAATCAGAATAACTCCGATCCGAGTCCGGACCGCGAGGAGCCGACTAGTGCCTCAAAGAAGTCAGGAAAGAAATTACGAGTATCGAGTGAATGTTATAGTCAAGAAGTCGAGGCAGTTGATGGAGTCTCCTCGTCTTGTGCCTCGAAGAAGTCGGGAAGTGAATCTCAGAGTAAGAGAAAGAAAACAGCTGCTTAA MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWNQNNSDPSPDREEPTSASKKSGKKLRVSSECYSQEVEAVDGVSSSCASKKSGSESQSKRKKTAA
BLAST of Cp4.1LG16g07480 vs. TrEMBL
Match: K4DCH2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.8e-18 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. TrEMBL
Match: V4L939_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10009758mg PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.8e-17 Identity = 55/138 (39.86%), Postives = 91/138 (65.94%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. TrEMBL
Match: A5AUR9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003394 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17 Identity = 67/154 (43.51%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. TrEMBL
Match: A0A0B0PK16_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_00109 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. TrEMBL
Match: A0A061DS97_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_001700 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.1e-17 Identity = 69/168 (41.07%), Postives = 100/168 (59.52%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. TAIR10
Match: AT1G06320.1 (AT1G06320.1 unknown protein) HSP 1 Score: 87.4 bits (215), Expect = 9.6e-18 Identity = 50/126 (39.68%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. NCBI nr
Match: gi|985470270|ref|XP_015380948.1| (PREDICTED: uncharacterized protein LOC102610754 [Citrus sinensis]) HSP 1 Score: 100.5 bits (249), Expect = 3.1e-18 Identity = 50/98 (51.02%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. NCBI nr
Match: gi|723748304|ref|XP_010313869.1| (PREDICTED: uncharacterized protein LOC101257540 isoform X2 [Solanum lycopersicum]) HSP 1 Score: 100.1 bits (248), Expect = 4.0e-18 Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. NCBI nr
Match: gi|970067822|ref|XP_015061023.1| (PREDICTED: uncharacterized protein LOC107007069 isoform X2 [Solanum pennellii]) HSP 1 Score: 99.8 bits (247), Expect = 5.3e-18 Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. NCBI nr
Match: gi|460412831|ref|XP_004251801.1| (PREDICTED: uncharacterized protein LOC101257540 isoform X1 [Solanum lycopersicum]) HSP 1 Score: 99.4 bits (246), Expect = 6.9e-18 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of Cp4.1LG16g07480 vs. NCBI nr
Match: gi|970067820|ref|XP_015061022.1| (PREDICTED: uncharacterized protein LOC107007069 isoform X1 [Solanum pennellii]) HSP 1 Score: 99.0 bits (245), Expect = 9.0e-18 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |