Cp4.1LG16g02370 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACAACAAACAAAACCCATTAACTCATTTGCGCCGCCGACCGGAGACATGTTCGCGGCGGAGACGACAGTGTCGGAAACACAAACGGGTCGAGTAAAATGGCGGCGAACAGACGGCGATTGCAGGAGCTTGTGCTCTGTCTCGACTCCGGCGAGCCGGGTCGAGCATTTTGAGGATCTGATAGCGGCCGGTGATTGGCCGGAGCTGCGAAGCAATCGGAGTGGATCGAGAAATCAGAAGAGGAAAACAGAGACATCGAAACAGAGCTCAAAAGATTGTAAAGAAGTTCAAAAATTGGATTATGTTCATGTCAGAGCACGTCGAGGCCAAGCCACCGACAGCCATAGTCTTGCCGAAAGAGTAAGAATCCGGTCGTGTTTTTAAATATATTTTTAAATTTTTTAAAATTTTAATAATATTTTTAAAAAGAAATTCAAAAATATTATTATTGTAATACCACATTTACTATATATTAAAATTATAATATATGGACAAAAACTATATATTATATCGCTCATAAAAGAAAAATTATAATTTTTTTAAAAAAATATTTAAGAATTTTCGCGTTGTTTTTTAAAGTTTATAGATCTTTTTGAAATGTGATAATAATAGTTTCGTTCACATACTAACGATATAATATATATATTAATGAAATTTTTGAAAATTTAAGAATATTGTTGAAATATTTTTTTAAGGTTTAAGGGTATTTTTTAAACAATTTTATTTTCTATCTGAGACTAAAATAAAAAGTATTTTTTTAAATATTACTGAGTATTTTTTTAAAAAATGTGGTACTAATGTACCCGTTCATATATTAATTAGTATTTTTAAAATTTTAAAGAAATTAAAGTATTAATGAAAATTTTAAAAACTCGAAGATATAATCAAAATACTTTTAAAAGTTGTAAAACTATTCGTCAAACCGTATTTATAATATATATATATATATATATATATATATTTAAATTTTTTTTTTGAATGTATGATATATATTTTTTTAATTTAAATTGAATGGATATTTTTGAAACGTGATACTAATAATTTTGTTCATACCGTAAAAGTTTTTCTTTTTTTTTAAGATTTAAAAAATATTTAAAGGTATTTTTGAAACAAAGTATCTGAAATGACGGGAATTTGCAGGTGAGGAGAGAGAAGATAAGTAAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGCAACAAAATCACTGGAAAAGTTGGAATGCTTGATGAAATTATAAACTATGTTCAATCTCTACAGCAACAAGTCGAGGTCATAAATTCATCCAAATCAATAAATTAACAATTTTTTTTTTTTTTTTCACTAAAAGTTTTGATTTTTTTTTTTTTTTTTTTTTTTTTAGTTCTTATCCATGAACTTGGCCGCTTTGAATCACGAATTCGATCTCGTCAATGGCCATGACCTCTTCGTCGAGCAGGTGAAGATTGTTCGTTTAAAAAATACTCTTGAACTTTCGAAGTTTCATTCATTCGTACCCTTAAATTCTTTAGAAATTTCAAAAAAGTCATTAATTTTTTATATATTTACGGTCCCGATAAGGGTAATTTTGAATTTTTTTGAAAATGGAGGTAAGAAGTTTTAAAGGTATTTTTATTAATTTAGCGTTAAGTATTTAACTAAGCTTAGGTTGATGTTTATTCGATTGTGTTAAAATATATATTATTTTGCGAGTAATTAATAAAATATAGGGTAAATTACAGTTTTGACCTTTGAAGTTTGAGCAACGTGATGATCGTGTTCCTATTTCTTCTAGAAACCTCATCTAGATTTAGGCAATGAGTGCATGTTCTGTGTCACTATTTGGGGGACGATAGCAGGAGATGGAAGCCAGCCCAAACGTATTGCTAGTAGATATTGTCCTCAAGGTTCTAAAATGTATATATTAGGGAGACGTTTCCACACCCTTCTAAGGAATATTTCGTTCAGTCTCTCCGGTCGATATGAGATCCCACACATCACCACTTTTTATTATAAAAAAGACGTCACGTCAAGAGACCAAACTAGATGATTTTCTGACCTCGAGAATAAGATCGTTCAATTTTAAAACCTAGAGACAAAATATCGGGATGTTCAAATTTAGAGACTAAAAATCTAAATAATTACTTAAAAAAACAATAGTTTTCATTCAACGTTCTAATAAATTTTCCGTCAAAATTTACAGGTGTTTCCGACGATAGAAATCTCACCCGAAACGGCTAATTACTCGTCCAACTTTAATGAACTCGAAATCGGCTCGAGCTCAAGCTCTTTAACAGTCCCAGAAACTTCATTTTTCAACTCATCTTCTATTACTGTAATTTCCTTTCTCAATTTCTTCTCTCAGCTTCGAATTCTTCTTTTGTTTTTTGCTTTAATGGTTTTTTTCTTCTTTTCTATAGCATTTTGAACACTCTTCAACTTGGGGAGGTGATTTACAGAGTCTTCATGGTATGAGCTTTGAAGAAGAAGGACCGCCATTGTTGTCGCCATCGAGCTTTTTAACGCAGCAATGTTCATACATTGAAGATGAAAATGAAACATTTCTAGACCAAAAACATGTTTCATTTTAACGTTAAATTAGTATTTCAGTGTCGAGTTATGGTAGAAATATTGTTTAAATGCTAATTTAGTGTCATATGTTTTATTTATATTAATAAAAATTATTATCGGGTTT CAACAACAAACAAAACCCATTAACTCATTTGCGCCGCCGACCGGAGACATGTTCGCGGCGGAGACGACAGTGTCGGAAACACAAACGGGTCGAGTAAAATGGCGGCGAACAGACGGCGATTGCAGGAGCTTGTGCTCTGTCTCGACTCCGGCGAGCCGGGTCGAGCATTTTGAGGATCTGATAGCGGCCGGTGATTGGCCGGAGCTGCGAAGCAATCGGAGTGGATCGAGAAATCAGAAGAGGAAAACAGAGACATCGAAACAGAGCTCAAAAGATTGTAAAGAAGTTCAAAAATTGGATTATGTTCATGTCAGAGCACGTCGAGGCCAAGCCACCGACAGCCATAGTCTTGCCGAAAGAGTGAGGAGAGAGAAGATAAGTAAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGCAACAAAATCACTGGAAAAGTTGGAATGCTTGATGAAATTATAAACTATGTTCAATCTCTACAGCAACAAGTCGAGGTGTTTCCGACGATAGAAATCTCACCCGAAACGGCTAATTACTCGTCCAACTTTAATGAACTCGAAATCGGCTCGAGCTCAAGCTCTTTAACAGTCCCAGAAACTTCATTTTTCAACTCATCTTCTATTACTCATTTTGAACACTCTTCAACTTGGGGAGGTGATTTACAGAGTCTTCATGGTATGAGCTTTGAAGAAGAAGGACCGCCATTGTTGTCGCCATCGAGCTTTTTAACGCAGCAATGTTCATACATTGAAGATGAAAATGAAACATTTCTAGACCAAAAACATGTTTCATTTTAACGTTAAATTAGTATTTCAGTGTCGAGTTATGGTAGAAATATTGTTTAAATGCTAATTTAGTGTCATATGTTTTATTTATATTAATAAAAATTATTATCGGGTTT ATGTTCGCGGCGGAGACGACAGTGTCGGAAACACAAACGGGTCGAGTAAAATGGCGGCGAACAGACGGCGATTGCAGGAGCTTGTGCTCTGTCTCGACTCCGGCGAGCCGGGTCGAGCATTTTGAGGATCTGATAGCGGCCGGTGATTGGCCGGAGCTGCGAAGCAATCGGAGTGGATCGAGAAATCAGAAGAGGAAAACAGAGACATCGAAACAGAGCTCAAAAGATTGTAAAGAAGTTCAAAAATTGGATTATGTTCATGTCAGAGCACGTCGAGGCCAAGCCACCGACAGCCATAGTCTTGCCGAAAGAGTGAGGAGAGAGAAGATAAGTAAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGCAACAAAATCACTGGAAAAGTTGGAATGCTTGATGAAATTATAAACTATGTTCAATCTCTACAGCAACAAGTCGAGGTGTTTCCGACGATAGAAATCTCACCCGAAACGGCTAATTACTCGTCCAACTTTAATGAACTCGAAATCGGCTCGAGCTCAAGCTCTTTAACAGTCCCAGAAACTTCATTTTTCAACTCATCTTCTATTACTCATTTTGAACACTCTTCAACTTGGGGAGGTGATTTACAGAGTCTTCATGGTATGAGCTTTGAAGAAGAAGGACCGCCATTGTTGTCGCCATCGAGCTTTTTAACGCAGCAATGTTCATACATTGAAGATGAAAATGAAACATTTCTAGACCAAAAACATGTTTCATTTTAA MFAAETTVSETQTGRVKWRRTDGDCRSLCSVSTPASRVEHFEDLIAAGDWPELRSNRSGSRNQKRKTETSKQSSKDCKEVQKLDYVHVRARRGQATDSHSLAERVRREKISKRMKYLQNLVPGCNKITGKVGMLDEIINYVQSLQQQVEVFPTIEISPETANYSSNFNELEIGSSSSSLTVPETSFFNSSSITHFEHSSTWGGDLQSLHGMSFEEEGPPLLSPSSFLTQQCSYIEDENETFLDQKHVSF
BLAST of Cp4.1LG16g02370 vs. Swiss-Prot
Match: HBI1_ARATH (Transcription factor HBI1 OS=Arabidopsis thaliana GN=HBI1 PE=1 SV=3) HSP 1 Score: 133.3 bits (334), Expect = 3.8e-30 Identity = 84/178 (47.19%), Postives = 108/178 (60.67%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. Swiss-Prot
Match: BH063_ARATH (Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.1e-29 Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.9e-27 Identity = 81/183 (44.26%), Postives = 108/183 (59.02%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. Swiss-Prot
Match: BEE2_ARATH (Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.3e-26 Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 5.6e-26 Identity = 77/138 (55.80%), Postives = 91/138 (65.94%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TrEMBL
Match: A0A124SHV3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_010887 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32 Identity = 91/166 (54.82%), Postives = 112/166 (67.47%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TrEMBL
Match: A0A0D2TUJ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G036400 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32 Identity = 86/172 (50.00%), Postives = 121/172 (70.35%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TrEMBL
Match: A0A061DZ57_THECC (Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform 6 (Fragment) OS=Theobroma cacao GN=TCM_006871 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.0e-30 Identity = 89/176 (50.57%), Postives = 113/176 (64.20%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TrEMBL
Match: A0A061DYZ2_THECC (Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform 5 OS=Theobroma cacao GN=TCM_006871 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 7.6e-30 Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TrEMBL
Match: A0A061DZ54_THECC (Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform 1 OS=Theobroma cacao GN=TCM_006871 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.9e-30 Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TAIR10
Match: AT2G18300.3 (AT2G18300.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31 Identity = 84/178 (47.19%), Postives = 108/178 (60.67%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TAIR10
Match: AT4G34530.1 (AT4G34530.1 cryptochrome-interacting basic-helix-loop-helix 1) HSP 1 Score: 129.8 bits (325), Expect = 2.3e-30 Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TAIR10
Match: AT1G68920.1 (AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 123.2 bits (308), Expect = 2.2e-28 Identity = 81/183 (44.26%), Postives = 108/183 (59.02%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TAIR10
Match: AT4G36540.1 (AT4G36540.1 BR enhanced expression 2) HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27 Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 119.4 bits (298), Expect = 3.2e-27 Identity = 77/138 (55.80%), Postives = 91/138 (65.94%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. NCBI nr
Match: gi|778669339|ref|XP_004148863.2| (PREDICTED: transcription factor bHLH78 [Cucumis sativus]) HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48 Identity = 126/203 (62.07%), Postives = 140/203 (68.97%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. NCBI nr
Match: gi|976926884|gb|KVI10728.1| (hypothetical protein Ccrd_010887 [Cynara cardunculus var. scolymus]) HSP 1 Score: 147.5 bits (371), Expect = 3.1e-32 Identity = 91/166 (54.82%), Postives = 112/166 (67.47%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. NCBI nr
Match: gi|763812321|gb|KJB79173.1| (hypothetical protein B456_013G036400 [Gossypium raimondii]) HSP 1 Score: 147.5 bits (371), Expect = 3.1e-32 Identity = 86/172 (50.00%), Postives = 121/172 (70.35%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. NCBI nr
Match: gi|802564213|ref|XP_012067265.1| (PREDICTED: transcription factor bHLH63 isoform X2 [Jatropha curcas]) HSP 1 Score: 147.1 bits (370), Expect = 4.0e-32 Identity = 96/199 (48.24%), Postives = 127/199 (63.82%), Query Frame = 1
BLAST of Cp4.1LG16g02370 vs. NCBI nr
Match: gi|590685712|ref|XP_007042174.1| (Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform 6, partial [Theobroma cacao]) HSP 1 Score: 141.0 bits (354), Expect = 2.9e-30 Identity = 89/176 (50.57%), Postives = 113/176 (64.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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