Cp4.1LG16g00790 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g00790
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChitinase 1
LocationCp4.1LG16 : 1600582 .. 1602136 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTCGGACCTCGTCAGCTTCATCTCTTCCTCTTCGTCGTTGCAACGTTCAATCATTTCTGCGGTAAGTTTTAGGAACCACGACTCTCGTAATAGTATGATATATTCCTTACTTATAAACCTATGATAATTCTCGACTCCTTCCGAACAATCCTCCCCTCAAACAAAATACACTATAGAGCCTCCCTCGAGGCTTATGATGGAGCCCTCGAACAGTCTCCTCTTAATCGAGGCTTGACTCCTTTTCTGGAGTTCTCGAATGATAATTCCCGATTCCTTCCCAACAATCCTCCACTCGAACAAAATACATCATAGAGCCTCTCCTGAGGCCTATGTTGGAGCCCTCGAACAGTCTCTTCTTAATCGAGGCTCGACTCTTTCTCTGGAGTCCTCGAACAAAGTACACAAATTTTTTGACACTTGAGTCACTTTTGACTACACCTTTGAAACTCATAACTTATTTGTTTGATATTTGAGGATTCTGTTGACGTGACTAAGTTAAGGGCATGACTCTAATAACATGTTAGGAATCACGGACCTTCACAATGGTATGATATCATCTACTTTGAGCATAAGTGCTCGTGGCTTTGCTTTGGGAATTCCCAGAAGACCTCATACCAATGGAGATATATTCTTTACTTATAAACTCATGATCATTCCCTAAATTAGCCGATGTGAGACTCTCTCCTAATGATCGTAAACCTTAAAACTTTCTCTTAAAAATGTAGATGGGAAAAAAGTGATGATGGAGTACATCGGAGCGACAGGCATTCCAGTCACCTTCGACAGCGTCCCGATCTTCGATGATATCGATTTCCATTTCATCCTTAGCTTCGCCATCGACGCAGATCCCTCCGGCAATCCTCAAAATGGGAAATTCTCCAACTATTGGGAGCCCTCACTGACCCCAGAATCAGTTGCAGCCATTAAAGCCGAACACCCGAACGTCAAAGCCCTAGCGAGCCTCTCGGGTTGGAGCCTCGGTGACACCGTCCTCCGATGGCAAAACCCTCGAAACCCTAATCTCTGGATCACCAATGCCTTCTCCACTCTCAAAGCTCTTGTCATCAAATACCATCTCGACGGCATCGACATCGACTACGAAAACTTCCCAAAACACGGCTCAAACTTCGCCTTCTGCATCGGTGAGCTCATAACCCTACTTAAGAACCAAAGCGTCATCTCCGTAGCCACAATTGCGCCGTATTACTCGACGGTTTCACCTTACTTGGAGCTCTACCATGGCTATGGGGAGGTGATTGATTATGTCAACTACCAATTTTATACCGACAAAGTGAGAACGGCTAAGGCTTACTTGAAGAGATTTGAGGTTAGAGCTAAGGAGTTTGGAGAAGGGAAGTTGCTACCAAGCTATGAGGTGAATGGAAGAGGGATTCAAGGGGATGCCTTTTTTGAAGCTTTGAATTTGTTGAATGAAAATGGATTTGATATCAATGGAGTCATGATCTTCTCTGCGGATGCTTCCCTCTCCAATGGCTTCCATTTCGAAACGAGATCTCAACAGTTCTTGCTCAACTCGACCGTCTCGTGA

mRNA sequence

ATGATCGTCGGACCTCGCATTCCAGTCACCTTCGACAGCGTCCCGATCTTCGATGATATCGATTTCCATTTCATCCTTAGCTTCGCCATCGACGCAGATCCCTCCGGCAATCCTCAAAATGGGAAATTCTCCAACTATTGGGAGCCCTCACTGACCCCAGAATCAGTTGCAGCCATTAAAGCCGAACACCCGAACGTCAAAGCCCTAGCGAGCCTCTCGGGTTGGAGCCTCGGTGACACCGTCCTCCGATGGCAAAACCCTCGAAACCCTAATCTCTGGATCACCAATGCCTTCTCCACTCTCAAAGCTCTTGTCATCAAATACCATCTCGACGGCATCGACATCGACTACGAAAACTTCCCAAAACACGGCTCAAACTTCGCCTTCTGCATCGGTGAGCTCATAACCCTACTTAAGAACCAAAGCGTCATCTCCGTAGCCACAATTGCGCCGTATTACTCGACGGTTTCACCTTACTTGGAGCTCTACCATGGCTATGGGGAGGTGATTGATTATGTCAACTACCAATTTTATACCGACAAAGTGAGAACGGCTAAGGCTTACTTGAAGAGATTTGAGGTTAGAGCTAAGGAGTTTGGAGAAGGGAAGTTGCTACCAAGCTATGAGGTGAATGGAAGAGGGATTCAAGGGGATGCCTTTTTTGAAGCTTTGAATTTGTTGAATGAAAATGGATTTGATATCAATGGAGTCATGATCTTCTCTGCGGATGCTTCCCTCTCCAATGGCTTCCATTTCGAAACGAGATCTCAACAGTTCTTGCTCAACTCGACCGTCTCGTGA

Coding sequence (CDS)

ATGATCGTCGGACCTCGCATTCCAGTCACCTTCGACAGCGTCCCGATCTTCGATGATATCGATTTCCATTTCATCCTTAGCTTCGCCATCGACGCAGATCCCTCCGGCAATCCTCAAAATGGGAAATTCTCCAACTATTGGGAGCCCTCACTGACCCCAGAATCAGTTGCAGCCATTAAAGCCGAACACCCGAACGTCAAAGCCCTAGCGAGCCTCTCGGGTTGGAGCCTCGGTGACACCGTCCTCCGATGGCAAAACCCTCGAAACCCTAATCTCTGGATCACCAATGCCTTCTCCACTCTCAAAGCTCTTGTCATCAAATACCATCTCGACGGCATCGACATCGACTACGAAAACTTCCCAAAACACGGCTCAAACTTCGCCTTCTGCATCGGTGAGCTCATAACCCTACTTAAGAACCAAAGCGTCATCTCCGTAGCCACAATTGCGCCGTATTACTCGACGGTTTCACCTTACTTGGAGCTCTACCATGGCTATGGGGAGGTGATTGATTATGTCAACTACCAATTTTATACCGACAAAGTGAGAACGGCTAAGGCTTACTTGAAGAGATTTGAGGTTAGAGCTAAGGAGTTTGGAGAAGGGAAGTTGCTACCAAGCTATGAGGTGAATGGAAGAGGGATTCAAGGGGATGCCTTTTTTGAAGCTTTGAATTTGTTGAATGAAAATGGATTTGATATCAATGGAGTCATGATCTTCTCTGCGGATGCTTCCCTCTCCAATGGCTTCCATTTCGAAACGAGATCTCAACAGTTCTTGCTCAACTCGACCGTCTCGTGA

Protein sequence

MIVGPRIPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASLSNGFHFETRSQQFLLNSTVS
Homology
[Close]
BLAST of Cp4.1LG16g00790 vs. Swiss-Prot
Match: CHIT1_TULBA (Chitinase 1 OS=Tulipa bakeri PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 109/262 (41.60%), Postives = 159/262 (60.69%), Query Frame = 1 

Query: 9   VTFDSVPIFDDIDFHFILSFAID--ADPSGNPQNGKFSNYWEP-SLTPESVAAIKAEHPN 68
           V F  VPI  D+DFHFIL+FAID  +  S  P NG F  +W+  +L+P  VAA+K  H N
Sbjct: 40  VKFSDVPINPDVDFHFILAFAIDYTSGSSPTPTNGNFKPFWDTNNLSPSQVAAVKRTHSN 99

Query: 69  VKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGS 128
           VK   SL G S+G   + + +P + + W+ NA S+L  ++ +YHLDGIDIDYE+F    +
Sbjct: 100 VKVSLSLGGDSVGGKNV-FFSPSSVSSWVENAVSSLTRIIKQYHLDGIDIDYEHFKGDPN 159

Query: 129 NFAFCIGELITLLKNQSVISVATIAPY--YSTVSPYLELYHGYGEVIDYVNYQFYTDKVR 188
            FA CIG+L+T LK   V+S  +IAP+      S Y  L+  YG  IDYVN+QFY    R
Sbjct: 160 TFAECIGQLVTRLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYAYSAR 219

Query: 189 TA-KAYLKRFEVRAKEFGEGKLLPSYEVNGRG--IQGDAFFEALNLLNENGFDINGVMIF 248
           T+ + +LK FE ++  +  GK+L S+  +  G     + FF A ++L + G  ++G+ ++
Sbjct: 220 TSVEQFLKYFEEQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQG-KLHGIFVW 279

Query: 249 SADASL--SNGFHFETRSQQFL 261
           SAD SL  +N F +E ++Q  L
Sbjct: 280 SADDSLMSNNVFRYEMQAQSML 299

[Close]
BLAST of Cp4.1LG16g00790 vs. Swiss-Prot
Match: CHIT2_TULBA (Chitinase 2 OS=Tulipa bakeri PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.8e-45
Identity = 107/262 (40.84%), Postives = 159/262 (60.69%), Query Frame = 1 

Query: 9   VTFDSVPIFDDIDFHFILSFAID--ADPSGNPQNGKFSNYWEP-SLTPESVAAIKAEHPN 68
           V F  VPI  ++DFHFIL+FAID  +  S  P NG F+ +W+  +L+P  VAAIK  + N
Sbjct: 14  VKFSDVPINPNVDFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLSPSQVAAIKRTYNN 73

Query: 69  VKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGS 128
           VK   SL G S+G   + + NP + + W+ NA S+L  ++ +YHLDGIDIDYE+F    +
Sbjct: 74  VKVSVSLGGNSVGGERV-FFNPSSVSSWVDNAVSSLTKIIKQYHLDGIDIDYEHFKGDPN 133

Query: 129 NFAFCIGELITLLKNQSVISVATIAPY--YSTVSPYLELYHGYGEVIDYVNYQFYTDKVR 188
            FA CIG+L+T LK   V+S  +IAP+      S Y  L+  YG  IDYVN+QFY    R
Sbjct: 134 TFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYVYSSR 193

Query: 189 -TAKAYLKRFEVRAKEFGEGKLLPSYEVNGRG--IQGDAFFEALNLLNENGFDINGVMIF 248
            + + +LK FE++   +  GK+L S+  +  G     + FF+A ++L + G  ++G+ ++
Sbjct: 194 MSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKKQG-KLHGIFVW 253

Query: 249 SADASLSNG--FHFETRSQQFL 261
           SAD SL +   F +E ++Q  L
Sbjct: 254 SADDSLMSNDVFKYEMQAQSLL 273

[Close]
BLAST of Cp4.1LG16g00790 vs. Swiss-Prot
Match: RUAP_SOYBN (RuBisCO-associated protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1 

Query: 21  DFHFILSFAIDADPSGNPQNGKFSNYWEPS-LTPESVAAIKAEHP----NVKALASLSG- 80
           +F   LS A D D   N  NGKF  YW+   +TPE +   K ++      VK L S+   
Sbjct: 28  EFQVTLSLARDYD-GNNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSIGNK 87

Query: 81  -----WSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSNFAF 140
                +++G       +  N   W++ A ++LK+++  Y+LDGID+ YE+   + ++F  
Sbjct: 88  NKQFPFTIG-------SDSNSEAWVSEATASLKSIIKTYNLDGIDVSYEDIAANEADFVN 147

Query: 141 CIGELITLLKNQSVISVATIAPYYSTVSP--YLELYHGYGEVIDYV 174
            +G L+  LK   +I+VA+ A      +   Y  LY  Y    D V
Sbjct: 148 SVGGLVRNLKQNKLITVASFATSADAANNKFYNLLYAEYATFFDTV 185

[Close]
BLAST of Cp4.1LG16g00790 vs. TrEMBL
Match: A0A142BTQ6_CUCME (Chitinase 1 OS=Cucumis melo GN=cht1 PE=2 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 2.0e-129
Identity = 227/260 (87.31%), Postives = 245/260 (94.23%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           IPVTFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YWEPSLTPESVAAIKA+HPNV
Sbjct: 9   IPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAAIKAQHPNV 68

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           KALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ LV KYHLDGID+DYENFP+HGSN
Sbjct: 69  KALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYENFPRHGSN 128

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FAFCIGELITLLKNQSVISVATIAPYYSTV PYLEL+HGYG+VID+VNYQFYTDKV T +
Sbjct: 129 FAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFYTDKVTTPE 188

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
           AYLKRFE+RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LL+ENGFD+NGVMIFSADASL
Sbjct: 189 AYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVMIFSADASL 248

Query: 247 SNGFHFETRSQQFLLNSTVS 267
           SN F FET+SQQFLLNST S
Sbjct: 249 SNDFLFETKSQQFLLNSTPS 268

[Close]
BLAST of Cp4.1LG16g00790 vs. TrEMBL
Match: A0A0A0LK30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302200 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 3.2e-127
Identity = 222/257 (86.38%), Postives = 243/257 (94.55%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           IP+TFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YW+PSLTPESVAAIKA+HPNV
Sbjct: 9   IPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVAAIKAQHPNV 68

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           KALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ LV +YHLDGID+DYENFP+HGSN
Sbjct: 69  KALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDYENFPRHGSN 128

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FAFCIGELITLLKNQSVISVATIAPYYSTV PYLEL+HGYG+VID+VNYQFYTDKV TA+
Sbjct: 129 FAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFYTDKVTTAE 188

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
           AYLKRF+ RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LL+ENGFDINGVMIFSADASL
Sbjct: 189 AYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGVMIFSADASL 248

Query: 247 SNGFHFETRSQQFLLNS 264
           SN F FET+SQQFLLN+
Sbjct: 249 SNDFLFETKSQQFLLNT 265

[Close]
BLAST of Cp4.1LG16g00790 vs. TrEMBL
Match: U5GGU4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s06080g PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.7e-108
Identity = 189/257 (73.54%), Postives = 221/257 (85.99%), Query Frame = 1 

Query: 8   PVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNVK 67
           PVTF+ VP+ D+IDFHFILSFAIDADPS  PQNGKFS YW  +LTP+SVAAIK  HPNVK
Sbjct: 10  PVTFNPVPVEDNIDFHFILSFAIDADPSAKPQNGKFSPYWVDTLTPQSVAAIKERHPNVK 69

Query: 68  ALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSNF 127
           ALASLSGWSLGD VLRW NP NP LWI NAF++L +L  +YHLDGIDIDYENFP++ ++F
Sbjct: 70  ALASLSGWSLGDEVLRWYNPENPQLWINNAFTSLTSLAKEYHLDGIDIDYENFPRNNASF 129

Query: 128 AFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAKA 187
           A+CIGELITLLKNQSVISVATIAP+++TV PY+EL++ YG+VIDYVN+QFYTDKV + K 
Sbjct: 130 AYCIGELITLLKNQSVISVATIAPFHTTVLPYIELFNKYGDVIDYVNHQFYTDKVTSPKG 189

Query: 188 YLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASLS 247
           YL  F +RA +F + KLLPSYEVNGRGIQGDAFF+ALNLL  NGFD+NGVMIFSADAS S
Sbjct: 190 YLAAFRLRATQFDKDKLLPSYEVNGRGIQGDAFFDALNLLEANGFDVNGVMIFSADASSS 249

Query: 248 NGFHFETRSQQFLLNST 265
           N +++E +SQ FL NST
Sbjct: 250 NNYYYERKSQAFLTNST 266

[Close]
BLAST of Cp4.1LG16g00790 vs. TrEMBL
Match: A0A061DJI6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_001459 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.2e-107
Identity = 187/258 (72.48%), Postives = 221/258 (85.66%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           +PV FD VPI D IDFHFILSFA+DADPSG+ QNGKFS YW  +LTPESVAAIK +HPNV
Sbjct: 10  VPVRFDPVPIEDGIDFHFILSFAVDADPSGSAQNGKFSTYWADTLTPESVAAIKKQHPNV 69

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           K +ASLSGWSLGD VLRW NP N  LWI+NAFS+LK++  +YHLDG+DIDYENFPK  S 
Sbjct: 70  KVMASLSGWSLGDKVLRWYNPVNIQLWISNAFSSLKSIAEEYHLDGVDIDYENFPKRNST 129

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FA+CIGELITLLKNQSVIS+ATIAP+++T +PY+EL+  YG+VID+VNYQFYTDKVR  K
Sbjct: 130 FAYCIGELITLLKNQSVISIATIAPFHTTTTPYIELFEKYGDVIDFVNYQFYTDKVRKPK 189

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
            YL+ FE+RA++F + KLLPSYEVNGRGIQGDAFF+AL+LL  N F +NGVMIFSADAS 
Sbjct: 190 GYLEAFELRAEQFDKDKLLPSYEVNGRGIQGDAFFDALSLLEANEFTVNGVMIFSADASS 249

Query: 247 SNGFHFETRSQQFLLNST 265
           SN +++E +SQ FLLNST
Sbjct: 250 SNDYYYERKSQDFLLNST 267

[Close]
BLAST of Cp4.1LG16g00790 vs. TrEMBL
Match: A0A0D2USV5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G120000 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 6.3e-107
Identity = 186/260 (71.54%), Postives = 222/260 (85.38%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           +PV  ++VP+   IDFHFILSFAIDADPSGN QNGKFS YW  +LTPESVAA+K  HPNV
Sbjct: 10  VPVKLEAVPVEGGIDFHFILSFAIDADPSGNTQNGKFSPYWADTLTPESVAAMKKSHPNV 69

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           KAL SLSGWSLGD VLRW  P +   WI+NAFS+L ++  +YHLDGIDIDYENFP+H S+
Sbjct: 70  KALTSLSGWSLGDKVLRWYTPDDTQQWISNAFSSLSSMAQQYHLDGIDIDYENFPRHNSS 129

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FA+CIGELITLLKNQSVISVATIAPY+ T++PY+EL+  YG+VID+VNYQFYTDKVR  K
Sbjct: 130 FAYCIGELITLLKNQSVISVATIAPYHKTIAPYIELFENYGDVIDFVNYQFYTDKVRKPK 189

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
           +Y++ F++RA +F + KLLPSYEVNGRGIQGDAFF+AL+LL ENGF +NGVMIFSADAS 
Sbjct: 190 SYVEAFKIRAGQFDKEKLLPSYEVNGRGIQGDAFFDALSLLEENGFGVNGVMIFSADASS 249

Query: 247 SNGFHFETRSQQFLLNSTVS 267
           SN +++E +SQ FLLNSTVS
Sbjct: 250 SNDYYYERKSQDFLLNSTVS 269

[Close]
BLAST of Cp4.1LG16g00790 vs. NCBI nr
Match: gi|1004356870|gb|AMP41494.1| (chitinase 1 [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 2.9e-129
Identity = 227/260 (87.31%), Postives = 245/260 (94.23%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           IPVTFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YWEPSLTPESVAAIKA+HPNV
Sbjct: 9   IPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAAIKAQHPNV 68

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           KALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ LV KYHLDGID+DYENFP+HGSN
Sbjct: 69  KALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYENFPRHGSN 128

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FAFCIGELITLLKNQSVISVATIAPYYSTV PYLEL+HGYG+VID+VNYQFYTDKV T +
Sbjct: 129 FAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFYTDKVTTPE 188

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
           AYLKRFE+RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LL+ENGFD+NGVMIFSADASL
Sbjct: 189 AYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVMIFSADASL 248

Query: 247 SNGFHFETRSQQFLLNSTVS 267
           SN F FET+SQQFLLNST S
Sbjct: 249 SNDFLFETKSQQFLLNSTPS 268

[Close]
BLAST of Cp4.1LG16g00790 vs. NCBI nr
Match: gi|659121946|ref|XP_008460896.1| (PREDICTED: chitinase 2-like [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 2.9e-129
Identity = 227/260 (87.31%), Postives = 245/260 (94.23%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           IPVTFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YWEPSLTPESVAAIKA+HPNV
Sbjct: 44  IPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAAIKAQHPNV 103

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           KALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ LV KYHLDGID+DYENFP+HGSN
Sbjct: 104 KALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYENFPRHGSN 163

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FAFCIGELITLLKNQSVISVATIAPYYSTV PYLEL+HGYG+VID+VNYQFYTDKV T +
Sbjct: 164 FAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFYTDKVTTPE 223

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
           AYLKRFE+RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LL+ENGFD+NGVMIFSADASL
Sbjct: 224 AYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVMIFSADASL 283

Query: 247 SNGFHFETRSQQFLLNSTVS 267
           SN F FET+SQQFLLNST S
Sbjct: 284 SNDFLFETKSQQFLLNSTPS 303

[Close]
BLAST of Cp4.1LG16g00790 vs. NCBI nr
Match: gi|449459274|ref|XP_004147371.1| (PREDICTED: chitinase 1-like [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 4.6e-127
Identity = 222/257 (86.38%), Postives = 243/257 (94.55%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           IP+TFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YW+PSLTPESVAAIKA+HPNV
Sbjct: 10  IPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVAAIKAQHPNV 69

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           KALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ LV +YHLDGID+DYENFP+HGSN
Sbjct: 70  KALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDYENFPRHGSN 129

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FAFCIGELITLLKNQSVISVATIAPYYSTV PYLEL+HGYG+VID+VNYQFYTDKV TA+
Sbjct: 130 FAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFYTDKVTTAE 189

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
           AYLKRF+ RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LL+ENGFDINGVMIFSADASL
Sbjct: 190 AYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGVMIFSADASL 249

Query: 247 SNGFHFETRSQQFLLNS 264
           SN F FET+SQQFLLN+
Sbjct: 250 SNDFLFETKSQQFLLNT 266

[Close]
BLAST of Cp4.1LG16g00790 vs. NCBI nr
Match: gi|700207034|gb|KGN62153.1| (hypothetical protein Csa_2G302200 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 4.6e-127
Identity = 222/257 (86.38%), Postives = 243/257 (94.55%), Query Frame = 1 

Query: 7   IPVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNV 66
           IP+TFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YW+PSLTPESVAAIKA+HPNV
Sbjct: 9   IPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVAAIKAQHPNV 68

Query: 67  KALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSN 126
           KALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ LV +YHLDGID+DYENFP+HGSN
Sbjct: 69  KALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDYENFPRHGSN 128

Query: 127 FAFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAK 186
           FAFCIGELITLLKNQSVISVATIAPYYSTV PYLEL+HGYG+VID+VNYQFYTDKV TA+
Sbjct: 129 FAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFYTDKVTTAE 188

Query: 187 AYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASL 246
           AYLKRF+ RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LL+ENGFDINGVMIFSADASL
Sbjct: 189 AYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGVMIFSADASL 248

Query: 247 SNGFHFETRSQQFLLNS 264
           SN F FET+SQQFLLN+
Sbjct: 249 SNDFLFETKSQQFLLNT 265

[Close]
BLAST of Cp4.1LG16g00790 vs. NCBI nr
Match: gi|743866773|ref|XP_011032558.1| (PREDICTED: chitinase 2-like [Populus euphratica])

HSP 1 Score: 399.8 bits (1026), Expect = 3.7e-108
Identity = 189/257 (73.54%), Postives = 222/257 (86.38%), Query Frame = 1 

Query: 8   PVTFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVAAIKAEHPNVK 67
           PVTF+ VP+ D+IDFHFILSFAIDADPS  PQNGKFS YW  +LTP+SVAAIK  HPNVK
Sbjct: 11  PVTFNPVPVEDNIDFHFILSFAIDADPSAKPQNGKFSPYWADTLTPQSVAAIKERHPNVK 70

Query: 68  ALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALVIKYHLDGIDIDYENFPKHGSNF 127
           ALASLSGWSLGD VLRW NP NP LWI NAF++L +L  +YHLDGIDIDYENFP++ ++F
Sbjct: 71  ALASLSGWSLGDEVLRWYNPENPQLWINNAFTSLTSLAKEYHLDGIDIDYENFPRNNASF 130

Query: 128 AFCIGELITLLKNQSVISVATIAPYYSTVSPYLELYHGYGEVIDYVNYQFYTDKVRTAKA 187
           A+CIGELITLLKNQSVISVATIAP+++TV PY+EL++ YG++IDYVN+QFYTDKVR+ K 
Sbjct: 131 AYCIGELITLLKNQSVISVATIAPFHTTVLPYIELFNKYGDLIDYVNHQFYTDKVRSPKG 190

Query: 188 YLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLNENGFDINGVMIFSADASLS 247
           YL  F++RA +F + KLLPSYEVNGRGIQGDAFF+ALNLL  NGFD+NGVMIFSADAS S
Sbjct: 191 YLAAFQLRATQFDKDKLLPSYEVNGRGIQGDAFFDALNLLEANGFDVNGVMIFSADASSS 250

Query: 248 NGFHFETRSQQFLLNST 265
           N +++E  SQ FL NST
Sbjct: 251 NNYYYERTSQAFLTNST 267

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g00790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHIT1_TULBA2.3e-4641.60Chitinase 1 OS=Tulipa bakeri PE=1 SV=1[more]
CHIT2_TULBA9.8e-4540.84Chitinase 2 OS=Tulipa bakeri PE=1 SV=1[more]
RUAP_SOYBN1.4e-1130.12RuBisCO-associated protein OS=Glycine max PE=2 SV=1[more]
BLAST of Cp4.1LG16g00790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A142BTQ6_CUCME2.0e-12987.31Chitinase 1 OS=Cucumis melo GN=cht1 PE=2 SV=1[more]
A0A0A0LK30_CUCSA3.2e-12786.38Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302200 PE=3 SV=1[more]
U5GGU4_POPTR5.7e-10873.54Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s06080g PE=3 SV=1[more]
A0A061DJI6_THECC2.2e-10772.48Uncharacterized protein OS=Theobroma cacao GN=TCM_001459 PE=3 SV=1[more]
A0A0D2USV5_GOSRA6.3e-10771.54Uncharacterized protein OS=Gossypium raimondii GN=B456_011G120000 PE=3 SV=1[more]
BLAST of Cp4.1LG16g00790 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG16g00790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1004356870|gb|AMP41494.1|2.9e-12987.31chitinase 1 [Cucumis melo][more]
gi|659121946|ref|XP_008460896.1|2.9e-12987.31PREDICTED: chitinase 2-like [Cucumis melo][more]
gi|449459274|ref|XP_004147371.1|4.6e-12786.38PREDICTED: chitinase 1-like [Cucumis sativus][more]
gi|700207034|gb|KGN62153.1|4.6e-12786.38hypothetical protein Csa_2G302200 [Cucumis sativus][more]
gi|743866773|ref|XP_011032558.1|3.7e-10873.54PREDICTED: chitinase 2-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR013781Glycoside hydrolase, catalytic domain
IPR001579Glyco_hydro_18_chit_AS
IPR001223Glyco_hydro18_cat
IPR0006772S_globulin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0004568 chitinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g00790.1Cp4.1LG16g00790.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0006772S globulinPRINTSPR005512SGLOBULINcoord: 56..74
score: 4.7E-5coord: 14..33
score: 4.
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 23..178
score: 1.9
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 110..118
scor
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 22..221
score: 7.1
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 15..257
score: 6.41
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 8..262
score: 2.3E
NoneNo IPR availablePANTHERPTHR11177:SF187SUBFAMILY NOT NAMEDcoord: 8..262
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g00790CmaCh20G010640Cucurbita maxima (Rimu)cmacpeB565
Cp4.1LG16g00790CmoCh20G010720Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g00790Cla007806Watermelon (97103) v1cpewmB288
Cp4.1LG16g00790Csa2G302200Cucumber (Chinese Long) v2cpecuB268
Cp4.1LG16g00790MELO3C023247Melon (DHL92) v3.5.1cpemeB261
Cp4.1LG16g00790ClCG02G000560Watermelon (Charleston Gray)cpewcgB268
Cp4.1LG16g00790CSPI02G15690Wild cucumber (PI 183967)cpecpiB270
Cp4.1LG16g00790Lsi10G007220Bottle gourd (USVL1VR-Ls)cpelsiB222
Cp4.1LG16g00790MELO3C023247.2Melon (DHL92) v3.6.1cpemedB305
Cp4.1LG16g00790CsaV3_2G018250Cucumber (Chinese Long) v3cpecucB0335
Cp4.1LG16g00790Bhi10G001334Wax gourdcpewgoB0359
Cp4.1LG16g00790CsGy2G015670Cucumber (Gy14) v2cgybcpeB194
Cp4.1LG16g00790Carg24319Silver-seed gourdcarcpeB1010
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g00790Cucurbita pepo (Zucchini)cpecpeB295
Cp4.1LG16g00790Cucurbita pepo (Zucchini)cpecpeB320
Cp4.1LG16g00790Cucumber (Gy14) v1cgycpeB0665
Cp4.1LG16g00790Cucurbita maxima (Rimu)cmacpeB623
Cp4.1LG16g00790Cucurbita moschata (Rifu)cmocpeB573
Cp4.1LG16g00790Watermelon (Charleston Gray)cpewcgB274
Cp4.1LG16g00790Watermelon (97103) v1cpewmB302
Cp4.1LG16g00790Melon (DHL92) v3.5.1cpemeB268
Cp4.1LG16g00790Cucumber (Gy14) v2cgybcpeB199
Cp4.1LG16g00790Melon (DHL92) v3.6.1cpemedB312
Cp4.1LG16g00790Silver-seed gourdcarcpeB1132
Cp4.1LG16g00790Silver-seed gourdcarcpeB1472