ClCG02G000560 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G000560
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionChitinase 1, putative
LocationCG_Chr02 : 606745 .. 607554 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGAATACATCGGAGCAACAGGCATTCCGATCACCTTCAATAGCGTGCCGATCTTCGATGACATCGACTTCCATTTCATCCTCAGCTTCGCCATTGATGCCGATCCCTCCGCCATTCCTCAAAATGGGAAGTTCTCCCCCTACTGGGAGCCCTCCCTAACCCCAGAATCAGTTGCAGCCATTAAAGCCCAACACCCCAATGTCAAAACCCTAGCCAGCCTCTCCGGTTGGAGCCTTGACGACACCGTCCTCCGGTGGAACAACCCTCCAAACCCTAACCTCTGGATCTCCAATGCCTTCTCCACTCTCCAAGCCCTCGTCGTCAAATACCACCTCGATGGCATCGACATCGACTACGAGAACTTCCCGAAACACGACTCCAACTTCGCGTTCTGCATTGGCGAGCTCATAACCCTATTGAAGAATCAAAGCGTGATATCGGTAGCCACAATTGCGCCATTTTACTCGACAGTTCCGCCATACTTGGAGCTCTTTCATGGCTATGGGGAGGTGATTGATTTTGTGAACTACCAATTTTATACTGACAAAGTGAAAACTGCGGAGGCATATTTGAAGACATTTGAGCTTCGAGCTAAGCAGTTCGGACGAGTGAAGTTGTTACCGAGCTATGAGGTGAACGGAAGAGGGATTCAAGGAGATGCTTTTTTTGAAGCTTTGAGTTTGTTGGATGAAAATGGATTTGATGTTAATGGAGTCATGATCTTCTCCGCAGATGCTTCCTTGTCCAATGACTTCCATTTTGAGACCAAATCTCAACAATTCTTGCTGAACTCAACTACCTCATAA

mRNA sequence

ATGATGGAATACATCGGAGCAACAGGCATTCCGATCACCTTCAATAGCGTGCCGATCTTCGATGACATCGACTTCCATTTCATCCTCAGCTTCGCCATTGATGCCGATCCCTCCGCCATTCCTCAAAATGGGAAGTTCTCCCCCTACTGGGAGCCCTCCCTAACCCCAGAATCAGTTGCAGCCATTAAAGCCCAACACCCCAATGTCAAAACCCTAGCCAGCCTCTCCGGTTGGAGCCTTGACGACACCGTCCTCCGGTGGAACAACCCTCCAAACCCTAACCTCTGGATCTCCAATGCCTTCTCCACTCTCCAAGCCCTCGTCGTCAAATACCACCTCGATGGCATCGACATCGACTACGAGAACTTCCCGAAACACGACTCCAACTTCGCGTTCTGCATTGGCGAGCTCATAACCCTATTGAAGAATCAAAGCGTGATATCGGTAGCCACAATTGCGCCATTTTACTCGACAGTTCCGCCATACTTGGAGCTCTTTCATGGCTATGGGGAGGTGATTGATTTTGTGAACTACCAATTTTATACTGACAAAGTGAAAACTGCGGAGGCATATTTGAAGACATTTGAGCTTCGAGCTAAGCAGTTCGGACGAGTGAAGTTGTTACCGAGCTATGAGGTGAACGGAAGAGGGATTCAAGGAGATGCTTTTTTTGAAGCTTTGAGTTTGTTGGATGAAAATGGATTTGATGTTAATGGAGTCATGATCTTCTCCGCAGATGCTTCCTTGTCCAATGACTTCCATTTTGAGACCAAATCTCAACAATTCTTGCTGAACTCAACTACCTCATAA

Coding sequence (CDS)

ATGATGGAATACATCGGAGCAACAGGCATTCCGATCACCTTCAATAGCGTGCCGATCTTCGATGACATCGACTTCCATTTCATCCTCAGCTTCGCCATTGATGCCGATCCCTCCGCCATTCCTCAAAATGGGAAGTTCTCCCCCTACTGGGAGCCCTCCCTAACCCCAGAATCAGTTGCAGCCATTAAAGCCCAACACCCCAATGTCAAAACCCTAGCCAGCCTCTCCGGTTGGAGCCTTGACGACACCGTCCTCCGGTGGAACAACCCTCCAAACCCTAACCTCTGGATCTCCAATGCCTTCTCCACTCTCCAAGCCCTCGTCGTCAAATACCACCTCGATGGCATCGACATCGACTACGAGAACTTCCCGAAACACGACTCCAACTTCGCGTTCTGCATTGGCGAGCTCATAACCCTATTGAAGAATCAAAGCGTGATATCGGTAGCCACAATTGCGCCATTTTACTCGACAGTTCCGCCATACTTGGAGCTCTTTCATGGCTATGGGGAGGTGATTGATTTTGTGAACTACCAATTTTATACTGACAAAGTGAAAACTGCGGAGGCATATTTGAAGACATTTGAGCTTCGAGCTAAGCAGTTCGGACGAGTGAAGTTGTTACCGAGCTATGAGGTGAACGGAAGAGGGATTCAAGGAGATGCTTTTTTTGAAGCTTTGAGTTTGTTGGATGAAAATGGATTTGATGTTAATGGAGTCATGATCTTCTCCGCAGATGCTTCCTTGTCCAATGACTTCCATTTTGAGACCAAATCTCAACAATTCTTGCTGAACTCAACTACCTCATAA

Protein sequence

MMEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVAAIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDYENFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQFYTDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVMIFSADASLSNDFHFETKSQQFLLNSTTS
Homology
[Close]
BLAST of ClCG02G000560 vs. Swiss-Prot
Match: CHIT1_TULBA (Chitinase 1 OS=Tulipa bakeri PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 8.1e-47
Identity = 111/271 (40.96%), Postives = 161/271 (59.41%), Query Frame = 1 

Query: 3   EYIGATGIPITFNSVPIFDDIDFHFILSFAID--ADPSAIPQNGKFSPYWEPS-LTPESV 62
           EYIG+    + F+ VPI  D+DFHFIL+FAID  +  S  P NG F P+W+ + L+P  V
Sbjct: 31  EYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSSPTPTNGNFKPFWDTNNLSPSQV 90

Query: 63  AAIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDID 122
           AA+K  H NVK   SL G S+    + ++ P + + W+ NA S+L  ++ +YHLDGIDID
Sbjct: 91  AAVKRTHSNVKVSLSLGGDSVGGKNVFFS-PSSVSSWVENAVSSLTRIIKQYHLDGIDID 150

Query: 123 YENFPKHDSNFAFCIGELITLLKNQSVISVATIAPF--YSTVPPYLELFHGYGEVIDFVN 182
           YE+F    + FA CIG+L+T LK   V+S  +IAPF        Y  L+  YG  ID+VN
Sbjct: 151 YEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVN 210

Query: 183 YQFYTDKVKTA-EAYLKTFELRAKQFGRVKLLPSYEVNGRG--IQGDAFFEALSLLDENG 242
           +QFY    +T+ E +LK FE ++  +   K+L S+  +  G     + FF A S+L + G
Sbjct: 211 FQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQG 270

Query: 243 FDVNGVMIFSADASL--SNDFHFETKSQQFL 264
             ++G+ ++SAD SL  +N F +E ++Q  L
Sbjct: 271 -KLHGIFVWSADDSLMSNNVFRYEMQAQSML 299

[Close]
BLAST of ClCG02G000560 vs. Swiss-Prot
Match: CHIT2_TULBA (Chitinase 2 OS=Tulipa bakeri PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.4e-46
Identity = 113/271 (41.70%), Postives = 163/271 (60.15%), Query Frame = 1 

Query: 3   EYIGATGIPITFNSVPIFDDIDFHFILSFAID--ADPSAIPQNGKFSPYWEPS-LTPESV 62
           EYIGA    + F+ VPI  ++DFHFIL+FAID  +  S  P NG F+P+W+ + L+P  V
Sbjct: 5   EYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLSPSQV 64

Query: 63  AAIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDID 122
           AAIK  + NVK   SL G S+    + +N P + + W+ NA S+L  ++ +YHLDGIDID
Sbjct: 65  AAIKRTYNNVKVSVSLGGNSVGGERVFFN-PSSVSSWVDNAVSSLTKIIKQYHLDGIDID 124

Query: 123 YENFPKHDSNFAFCIGELITLLKNQSVISVATIAPF--YSTVPPYLELFHGYGEVIDFVN 182
           YE+F    + FA CIG+L+T LK   V+S  +IAPF        Y  L+  YG  ID+VN
Sbjct: 125 YEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVN 184

Query: 183 YQFYTDKVK-TAEAYLKTFELRAKQFGRVKLLPSYEVNGRG--IQGDAFFEALSLLDENG 242
           +QFY    + + E +LK FE++   +   K+L S+  +  G     + FF+A S+L + G
Sbjct: 185 FQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKKQG 244

Query: 243 FDVNGVMIFSADASL-SND-FHFETKSQQFL 264
             ++G+ ++SAD SL SND F +E ++Q  L
Sbjct: 245 -KLHGIFVWSADDSLMSNDVFKYEMQAQSLL 273

[Close]
BLAST of ClCG02G000560 vs. Swiss-Prot
Match: RUAP_SOYBN (RuBisCO-associated protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 44/135 (32.59%), Postives = 70/135 (51.85%), Query Frame = 1 

Query: 24  DFHFILSFAIDADPSAIPQNGKFSPYWEPS-LTPESVAAIKAQHP----NVKTLASLSGW 83
           +F   LS A D D +    NGKF PYW+   +TPE +   K ++      VK L S+ G 
Sbjct: 28  EFQVTLSLARDYDGNN-STNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSI-GN 87

Query: 84  SLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDYENFPKHDSNFAFCIGELI 143
                     +  N   W+S A ++L++++  Y+LDGID+ YE+   ++++F   +G L+
Sbjct: 88  KNKQFPFTIGSDSNSEAWVSEATASLKSIIKTYNLDGIDVSYEDIAANEADFVNSVGGLV 147

Query: 144 TLLKNQSVISVATIA 154
             LK   +I+VA+ A
Sbjct: 148 RNLKQNKLITVASFA 160

[Close]
BLAST of ClCG02G000560 vs. TrEMBL
Match: A0A142BTQ6_CUCME (Chitinase 1 OS=Cucumis melo GN=cht1 PE=2 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.6e-137
Identity = 242/268 (90.30%), Postives = 253/268 (94.40%), Query Frame = 1 

Query: 2   MEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVAA 61
           MEYIGATGIP+TF++VPIFDDIDFHFILSFAIDADPSA PQNGKFSPYWEPSLTPESVAA
Sbjct: 1   MEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAA 60

Query: 62  IKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDYE 121
           IKAQHPNVK LASLSGWSLD+ VLRW NPP+PNLWISNAFSTLQ LV KYHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYE 120

Query: 122 NFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQFY 181
           NFP+H SNFAFCIGELITLLKNQSVISVATIAP+YSTV PYLELFHGYG+VIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKV T EAYLK FE+RAK+FG  KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM
Sbjct: 181 TDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLNSTTS 270
           IFSADASLSNDF FETKSQQFLLNST S
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLNSTPS 268

[Close]
BLAST of ClCG02G000560 vs. TrEMBL
Match: A0A0A0LK30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302200 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 5.5e-135
Identity = 237/265 (89.43%), Postives = 251/265 (94.72%), Query Frame = 1 

Query: 2   MEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVAA 61
           MEYIGATGIPITF++VPIFDDIDFHFILSFAIDADPSA PQNGKFSPYW+PSLTPESVAA
Sbjct: 1   MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVAA 60

Query: 62  IKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDYE 121
           IKAQHPNVK LASLSGWSLD+ VLRW NPP+PNLWISNAFSTLQ LV +YHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDYE 120

Query: 122 NFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQFY 181
           NFP+H SNFAFCIGELITLLKNQSVISVATIAP+YSTV PYLELFHGYG+VIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKV TAEAYLK F+ RAK+FG  KLLPSYEVNGRGIQGDAFFEALSLLDENGFD+NGVM
Sbjct: 181 TDKVTTAEAYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLNS 267
           IFSADASLSNDF FETKSQQFLLN+
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLNT 265

[Close]
BLAST of ClCG02G000560 vs. TrEMBL
Match: U5GGU4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s06080g PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 9.2e-114
Identity = 200/267 (74.91%), Postives = 235/267 (88.01%), Query Frame = 1 

Query: 2   MEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVAA 61
           MEYIGATG P+TFN VP+ D+IDFHFILSFAIDADPSA PQNGKFSPYW  +LTP+SVAA
Sbjct: 1   MEYIGATGQPVTFNPVPVEDNIDFHFILSFAIDADPSAKPQNGKFSPYWVDTLTPQSVAA 60

Query: 62  IKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDYE 121
           IK +HPNVK LASLSGWSL D VLRW NP NP LWI+NAF++L +L  +YHLDGIDIDYE
Sbjct: 61  IKERHPNVKALASLSGWSLGDEVLRWYNPENPQLWINNAFTSLTSLAKEYHLDGIDIDYE 120

Query: 122 NFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQFY 181
           NFP+++++FA+CIGELITLLKNQSVISVATIAPF++TV PY+ELF+ YG+VID+VN+QFY
Sbjct: 121 NFPRNNASFAYCIGELITLLKNQSVISVATIAPFHTTVLPYIELFNKYGDVIDYVNHQFY 180

Query: 182 TDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKV + + YL  F LRA QF + KLLPSYEVNGRGIQGDAFF+AL+LL+ NGFDVNGVM
Sbjct: 181 TDKVTSPKGYLAAFRLRATQFDKDKLLPSYEVNGRGIQGDAFFDALNLLEANGFDVNGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLNSTT 269
           IFSADAS SN++++E KSQ FL NST+
Sbjct: 241 IFSADASSSNNYYYERKSQAFLTNSTS 267

[Close]
BLAST of ClCG02G000560 vs. TrEMBL
Match: A0A061DJI6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_001459 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 2.7e-113
Identity = 200/268 (74.63%), Postives = 230/268 (85.82%), Query Frame = 1 

Query: 1   MMEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVA 60
           MMEYIGATG+P+ F+ VPI D IDFHFILSFA+DADPS   QNGKFS YW  +LTPESVA
Sbjct: 1   MMEYIGATGVPVRFDPVPIEDGIDFHFILSFAVDADPSGSAQNGKFSTYWADTLTPESVA 60

Query: 61  AIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDY 120
           AIK QHPNVK +ASLSGWSL D VLRW NP N  LWISNAFS+L+++  +YHLDG+DIDY
Sbjct: 61  AIKKQHPNVKVMASLSGWSLGDKVLRWYNPVNIQLWISNAFSSLKSIAEEYHLDGVDIDY 120

Query: 121 ENFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQF 180
           ENFPK +S FA+CIGELITLLKNQSVIS+ATIAPF++T  PY+ELF  YG+VIDFVNYQF
Sbjct: 121 ENFPKRNSTFAYCIGELITLLKNQSVISIATIAPFHTTTTPYIELFEKYGDVIDFVNYQF 180

Query: 181 YTDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKV+  + YL+ FELRA+QF + KLLPSYEVNGRGIQGDAFF+ALSLL+ N F VNGV
Sbjct: 181 YTDKVRKPKGYLEAFELRAEQFDKDKLLPSYEVNGRGIQGDAFFDALSLLEANEFTVNGV 240

Query: 241 MIFSADASLSNDFHFETKSQQFLLNSTT 269
           MIFSADAS SND+++E KSQ FLLNST+
Sbjct: 241 MIFSADASSSNDYYYERKSQDFLLNSTS 268

[Close]
BLAST of ClCG02G000560 vs. TrEMBL
Match: A0A0D2USV5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G120000 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-111
Identity = 195/269 (72.49%), Postives = 228/269 (84.76%), Query Frame = 1 

Query: 1   MMEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVA 60
           MMEYIGATG+P+   +VP+   IDFHFILSFAIDADPS   QNGKFSPYW  +LTPESVA
Sbjct: 1   MMEYIGATGVPVKLEAVPVEGGIDFHFILSFAIDADPSGNTQNGKFSPYWADTLTPESVA 60

Query: 61  AIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDY 120
           A+K  HPNVK L SLSGWSL D VLRW  P +   WISNAFS+L ++  +YHLDGIDIDY
Sbjct: 61  AMKKSHPNVKALTSLSGWSLGDKVLRWYTPDDTQQWISNAFSSLSSMAQQYHLDGIDIDY 120

Query: 121 ENFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQF 180
           ENFP+H+S+FA+CIGELITLLKNQSVISVATIAP++ T+ PY+ELF  YG+VIDFVNYQF
Sbjct: 121 ENFPRHNSSFAYCIGELITLLKNQSVISVATIAPYHKTIAPYIELFENYGDVIDFVNYQF 180

Query: 181 YTDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKV+  ++Y++ F++RA QF + KLLPSYEVNGRGIQGDAFF+ALSLL+ENGF VNGV
Sbjct: 181 YTDKVRKPKSYVEAFKIRAGQFDKEKLLPSYEVNGRGIQGDAFFDALSLLEENGFGVNGV 240

Query: 241 MIFSADASLSNDFHFETKSQQFLLNSTTS 270
           MIFSADAS SND+++E KSQ FLLNST S
Sbjct: 241 MIFSADASSSNDYYYERKSQDFLLNSTVS 269

[Close]
BLAST of ClCG02G000560 vs. NCBI nr
Match: gi|659121946|ref|XP_008460896.1| (PREDICTED: chitinase 2-like [Cucumis melo])

HSP 1 Score: 498.0 bits (1281), Expect = 1.0e-137
Identity = 243/269 (90.33%), Postives = 254/269 (94.42%), Query Frame = 1 

Query: 1   MMEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVA 60
           MMEYIGATGIP+TF++VPIFDDIDFHFILSFAIDADPSA PQNGKFSPYWEPSLTPESVA
Sbjct: 35  MMEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVA 94

Query: 61  AIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDY 120
           AIKAQHPNVK LASLSGWSLD+ VLRW NPP+PNLWISNAFSTLQ LV KYHLDGID+DY
Sbjct: 95  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDY 154

Query: 121 ENFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQF 180
           ENFP+H SNFAFCIGELITLLKNQSVISVATIAP+YSTV PYLELFHGYG+VIDFVNYQF
Sbjct: 155 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 214

Query: 181 YTDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKV T EAYLK FE+RAK+FG  KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV
Sbjct: 215 YTDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 274

Query: 241 MIFSADASLSNDFHFETKSQQFLLNSTTS 270
           MIFSADASLSNDF FETKSQQFLLNST S
Sbjct: 275 MIFSADASLSNDFLFETKSQQFLLNSTPS 303

[Close]
BLAST of ClCG02G000560 vs. NCBI nr
Match: gi|1004356870|gb|AMP41494.1| (chitinase 1 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 3.8e-137
Identity = 242/268 (90.30%), Postives = 253/268 (94.40%), Query Frame = 1 

Query: 2   MEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVAA 61
           MEYIGATGIP+TF++VPIFDDIDFHFILSFAIDADPSA PQNGKFSPYWEPSLTPESVAA
Sbjct: 1   MEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAA 60

Query: 62  IKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDYE 121
           IKAQHPNVK LASLSGWSLD+ VLRW NPP+PNLWISNAFSTLQ LV KYHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYE 120

Query: 122 NFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQFY 181
           NFP+H SNFAFCIGELITLLKNQSVISVATIAP+YSTV PYLELFHGYG+VIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKV T EAYLK FE+RAK+FG  KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM
Sbjct: 181 TDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLNSTTS 270
           IFSADASLSNDF FETKSQQFLLNST S
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLNSTPS 268

[Close]
BLAST of ClCG02G000560 vs. NCBI nr
Match: gi|449459274|ref|XP_004147371.1| (PREDICTED: chitinase 1-like [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 2.1e-135
Identity = 238/266 (89.47%), Postives = 252/266 (94.74%), Query Frame = 1 

Query: 1   MMEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVA 60
           MMEYIGATGIPITF++VPIFDDIDFHFILSFAIDADPSA PQNGKFSPYW+PSLTPESVA
Sbjct: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVA 60

Query: 61  AIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDY 120
           AIKAQHPNVK LASLSGWSLD+ VLRW NPP+PNLWISNAFSTLQ LV +YHLDGID+DY
Sbjct: 61  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDY 120

Query: 121 ENFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQF 180
           ENFP+H SNFAFCIGELITLLKNQSVISVATIAP+YSTV PYLELFHGYG+VIDFVNYQF
Sbjct: 121 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 180

Query: 181 YTDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKV TAEAYLK F+ RAK+FG  KLLPSYEVNGRGIQGDAFFEALSLLDENGFD+NGV
Sbjct: 181 YTDKVTTAEAYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGV 240

Query: 241 MIFSADASLSNDFHFETKSQQFLLNS 267
           MIFSADASLSNDF FETKSQQFLLN+
Sbjct: 241 MIFSADASLSNDFLFETKSQQFLLNT 266

[Close]
BLAST of ClCG02G000560 vs. NCBI nr
Match: gi|700207034|gb|KGN62153.1| (hypothetical protein Csa_2G302200 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 7.9e-135
Identity = 237/265 (89.43%), Postives = 251/265 (94.72%), Query Frame = 1 

Query: 2   MEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVAA 61
           MEYIGATGIPITF++VPIFDDIDFHFILSFAIDADPSA PQNGKFSPYW+PSLTPESVAA
Sbjct: 1   MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVAA 60

Query: 62  IKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDYE 121
           IKAQHPNVK LASLSGWSLD+ VLRW NPP+PNLWISNAFSTLQ LV +YHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDYE 120

Query: 122 NFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQFY 181
           NFP+H SNFAFCIGELITLLKNQSVISVATIAP+YSTV PYLELFHGYG+VIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKV TAEAYLK F+ RAK+FG  KLLPSYEVNGRGIQGDAFFEALSLLDENGFD+NGVM
Sbjct: 181 TDKVTTAEAYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLNS 267
           IFSADASLSNDF FETKSQQFLLN+
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLNT 265

[Close]
BLAST of ClCG02G000560 vs. NCBI nr
Match: gi|743866773|ref|XP_011032558.1| (PREDICTED: chitinase 2-like [Populus euphratica])

HSP 1 Score: 418.7 bits (1075), Expect = 7.7e-114
Identity = 199/268 (74.25%), Postives = 237/268 (88.43%), Query Frame = 1 

Query: 1   MMEYIGATGIPITFNSVPIFDDIDFHFILSFAIDADPSAIPQNGKFSPYWEPSLTPESVA 60
           MMEYIGATG P+TFN VP+ D+IDFHFILSFAIDADPSA PQNGKFSPYW  +LTP+SVA
Sbjct: 1   MMEYIGATGQPVTFNPVPVEDNIDFHFILSFAIDADPSAKPQNGKFSPYWADTLTPQSVA 60

Query: 61  AIKAQHPNVKTLASLSGWSLDDTVLRWNNPPNPNLWISNAFSTLQALVVKYHLDGIDIDY 120
           AIK +HPNVK LASLSGWSL D VLRW NP NP LWI+NAF++L +L  +YHLDGIDIDY
Sbjct: 61  AIKERHPNVKALASLSGWSLGDEVLRWYNPENPQLWINNAFTSLTSLAKEYHLDGIDIDY 120

Query: 121 ENFPKHDSNFAFCIGELITLLKNQSVISVATIAPFYSTVPPYLELFHGYGEVIDFVNYQF 180
           ENFP+++++FA+CIGELITLLKNQSVISVATIAPF++TV PY+ELF+ YG++ID+VN+QF
Sbjct: 121 ENFPRNNASFAYCIGELITLLKNQSVISVATIAPFHTTVLPYIELFNKYGDLIDYVNHQF 180

Query: 181 YTDKVKTAEAYLKTFELRAKQFGRVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKV++ + YL  F+LRA QF + KLLPSYEVNGRGIQGDAFF+AL+LL+ NGFDVNGV
Sbjct: 181 YTDKVRSPKGYLAAFQLRATQFDKDKLLPSYEVNGRGIQGDAFFDALNLLEANGFDVNGV 240

Query: 241 MIFSADASLSNDFHFETKSQQFLLNSTT 269
           MIFSADAS SN++++E  SQ FL NST+
Sbjct: 241 MIFSADASSSNNYYYERTSQAFLTNSTS 268

The following BLAST results are available for this feature:
BLAST of ClCG02G000560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHIT1_TULBA8.1e-4740.96Chitinase 1 OS=Tulipa bakeri PE=1 SV=1[more]
CHIT2_TULBA2.4e-4641.70Chitinase 2 OS=Tulipa bakeri PE=1 SV=1[more]
RUAP_SOYBN1.4e-1132.59RuBisCO-associated protein OS=Glycine max PE=2 SV=1[more]
BLAST of ClCG02G000560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A142BTQ6_CUCME2.6e-13790.30Chitinase 1 OS=Cucumis melo GN=cht1 PE=2 SV=1[more]
A0A0A0LK30_CUCSA5.5e-13589.43Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302200 PE=3 SV=1[more]
U5GGU4_POPTR9.2e-11474.91Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s06080g PE=3 SV=1[more]
A0A061DJI6_THECC2.7e-11374.63Uncharacterized protein OS=Theobroma cacao GN=TCM_001459 PE=3 SV=1[more]
A0A0D2USV5_GOSRA1.1e-11172.49Uncharacterized protein OS=Gossypium raimondii GN=B456_011G120000 PE=3 SV=1[more]
BLAST of ClCG02G000560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121946|ref|XP_008460896.1|1.0e-13790.33PREDICTED: chitinase 2-like [Cucumis melo][more]
gi|1004356870|gb|AMP41494.1|3.8e-13790.30chitinase 1 [Cucumis melo][more]
gi|449459274|ref|XP_004147371.1|2.1e-13589.47PREDICTED: chitinase 1-like [Cucumis sativus][more]
gi|700207034|gb|KGN62153.1|7.9e-13589.43hypothetical protein Csa_2G302200 [Cucumis sativus][more]
gi|743866773|ref|XP_011032558.1|7.7e-11474.25PREDICTED: chitinase 2-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0006772S_globulin
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR013781Glycoside hydrolase, catalytic domain
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006032 chitin catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0004568 chitinase activity
molecular_function GO:0008061 chitin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G000560.1ClCG02G000560.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0006772S globulinPRINTSPR005512SGLOBULINcoord: 17..36
score: 4.1E-5coord: 59..77
score: 4.
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 28..181
score: 3.1
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 113..121
scor
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 12..250
score: 2.0
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 17..261
score: 1.1
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 1..265
score: 1.1E
NoneNo IPR availablePANTHERPTHR11177:SF187SUBFAMILY NOT NAMEDcoord: 1..265
score: 1.1E