Cp4.1LG15g09070 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTCGCCGGACTCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTATCCACTTCTACCACTCATTTCTTCACTCCCTGTGGTAAGCTCTTCTTCCCTCTCCTCCTTGCTTCCTCACCTACACTTCTTTTGCCATCCACTTTACAAGTCCCCATCGTGCCCACGGCCTACACATCCACTAAGTAATTGCACTTTACCTGGGTGCCCCTGGCCCTCACTTTTTGCTTANCGTTCTTAAAATCTTCACGTCCTTTCTTTTTTGAATTTTTTATTTTATTTTTTTTTTCCATTTTAGCTATTTATTCAACCATTTAGAAAATCCATTGATGAAGTAAATAGATAAATATTTTTATGCGAATGTGTTCAAACAAAAATTAACCCAATAAACTCTTCTGTGGTAGATGCTAGAAGTGTGGAGAGAAGGTCCAAGAAACTCCAGCTGGCGAAATACTTGGATGTAATTGGGCAAAAGGTGAGCCACGTGGATGGTGGGACCAATTCCCAACCTTACGTGAGCTCCCCGTTTACTCTCCCGCCATTCGATTCGTTGCCGGACAACGCGCCCCCTTATTGCTCCTATCCCCCAGCTACTCCTCTGCCTCCCTCCTCGCCCTTCACCTACATTTCATCGCCGCCGCCGCCGCCCTTCTATTATCTTCCCCCACTGCTCCCACCTCCCACCCCAACCTACGGCTCTCCCCCCAGCTTCACCCCGCCTTACTATTACGAGCCCAGCCCTCCAAGCTACGTTCCCAGCCCACCCTCTCCCACGGTGTTCGTGCCGAGCCCACCCGTGTTCCAGCCACCCGTCATTTACCCTCCCCCGAGCGTGCCGCCCCCTCCCCACTCCGCACCCAATATAGCCCTTTGGTGCGTGGCCAAGCCCTCCGTGCCTGACCCAATCATTCAAGAGGCCATGAACTATGCCTGCGGGACGGTGGCGGATTGCGACACCATTCTCCCCAACGGACCCTGCTTTCTGCCCAACACACTCATCGCCCACGCTTCCTACGCCTTCAATAGCTATTGGCAGAGAACCAAGGTCGGCGGCGGCACCTGTGAGTTCGGCGGTACCGCCATGCTTGTCACCGTGGATCCCAGTAAGTTTGTAATCTCCTCATTTTTTATATAATTATTAATTATAATATAGGTTGTGGAATTTCTTTTAATTAATATATTGAATATGCTTGTTTTCTTGTGGGACACGGCAGGTTATGATGGCTGCCATTTCGTTTACACGTAG ATGGATTTCGCCGGACTCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTATCCACTTCTACCACTCATTTCTTCACTCCCTGTGATGCTAGAAGTGTGGAGAGAAGGTCCAAGAAACTCCAGCTGGCGAAATACTTGGATGTAATTGGGCAAAAGGTGAGCCACGTGGATGGTGGGACCAATTCCCAACCTTACGTGAGCTCCCCGTTTACTCTCCCGCCATTCGATTCGTTGCCGGACAACGCGCCCCCTTATTGCTCCTATCCCCCAGCTACTCCTCTGCCTCCCTCCTCGCCCTTCACCTACATTTCATCGCCGCCGCCGCCGCCCTTCTATTATCTTCCCCCACTGCTCCCACCTCCCACCCCAACCTACGGCTCTCCCCCCAGCTTCACCCCGCCTTACTATTACGAGCCCAGCCCTCCAAGCTACGTTCCCAGCCCACCCTCTCCCACGGTGTTCGTGCCGAGCCCACCCGTGTTCCAGCCACCCGTCATTTACCCTCCCCCGAGCGTGCCGCCCCCTCCCCACTCCGCACCCAATATAGCCCTTTGGTGCGTGGCCAAGCCCTCCGTGCCTGACCCAATCATTCAAGAGGCCATGAACTATGCCTGCGGGACGGTGGCGGATTGCGACACCATTCTCCCCAACGGACCCTGCTTTCTGCCCAACACACTCATCGCCCACGCTTCCTACGCCTTCAATAGCTATTGGCAGAGAACCAAGGTCGGCGGCGGCACCTGTGAGTTCGGCGGTACCGCCATGCTTGTCACCGTGGATCCCAGTTATGATGGCTGCCATTTCGTTTACACGTAG ATGGATTTCGCCGGACTCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTATCCACTTCTACCACTCATTTCTTCACTCCCTGTGATGCTAGAAGTGTGGAGAGAAGGTCCAAGAAACTCCAGCTGGCGAAATACTTGGATGTAATTGGGCAAAAGGTGAGCCACGTGGATGGTGGGACCAATTCCCAACCTTACGTGAGCTCCCCGTTTACTCTCCCGCCATTCGATTCGTTGCCGGACAACGCGCCCCCTTATTGCTCCTATCCCCCAGCTACTCCTCTGCCTCCCTCCTCGCCCTTCACCTACATTTCATCGCCGCCGCCGCCGCCCTTCTATTATCTTCCCCCACTGCTCCCACCTCCCACCCCAACCTACGGCTCTCCCCCCAGCTTCACCCCGCCTTACTATTACGAGCCCAGCCCTCCAAGCTACGTTCCCAGCCCACCCTCTCCCACGGTGTTCGTGCCGAGCCCACCCGTGTTCCAGCCACCCGTCATTTACCCTCCCCCGAGCGTGCCGCCCCCTCCCCACTCCGCACCCAATATAGCCCTTTGGTGCGTGGCCAAGCCCTCCGTGCCTGACCCAATCATTCAAGAGGCCATGAACTATGCCTGCGGGACGGTGGCGGATTGCGACACCATTCTCCCCAACGGACCCTGCTTTCTGCCCAACACACTCATCGCCCACGCTTCCTACGCCTTCAATAGCTATTGGCAGAGAACCAAGGTCGGCGGCGGCACCTGTGAGTTCGGCGGTACCGCCATGCTTGTCACCGTGGATCCCAGTTATGATGGCTGCCATTTCGTTTACACGTAG MDFAGLRRLLLLLLLLLLLVSTSTTHFFTPCDARSVERRSKKLQLAKYLDVIGQKVSHVDGGTNSQPYVSSPFTLPPFDSLPDNAPPYCSYPPATPLPPSSPFTYISSPPPPPFYYLPPLLPPPTPTYGSPPSFTPPYYYEPSPPSYVPSPPSPTVFVPSPPVFQPPVIYPPPSVPPPPHSAPNIALWCVAKPSVPDPIIQEAMNYACGTVADCDTILPNGPCFLPNTLIAHASYAFNSYWQRTKVGGGTCEFGGTAMLVTVDPSYDGCHFVYT
BLAST of Cp4.1LG15g09070 vs. Swiss-Prot
Match: PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.3e-19 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. Swiss-Prot
Match: PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18 Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.6e-18 Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. Swiss-Prot
Match: ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.8e-17 Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16 Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TrEMBL
Match: A0A0A0K3M1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G239620 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-126 Identity = 238/269 (88.48%), Postives = 244/269 (90.71%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TrEMBL
Match: B9RRP6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1425890 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.3e-66 Identity = 157/260 (60.38%), Postives = 172/260 (66.15%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TrEMBL
Match: V4RMJ9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005428mg PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 8.0e-65 Identity = 170/331 (51.36%), Postives = 203/331 (61.33%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TrEMBL
Match: W9QR22_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019250 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.4e-64 Identity = 158/278 (56.83%), Postives = 176/278 (63.31%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TrEMBL
Match: A0A0D2VMW4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G159900 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 4.0e-64 Identity = 166/292 (56.85%), Postives = 191/292 (65.41%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TAIR10
Match: AT1G79480.1 (AT1G79480.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 176.0 bits (445), Expect = 3.1e-44 Identity = 115/216 (53.24%), Postives = 131/216 (60.65%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TAIR10
Match: AT5G67460.1 (AT5G67460.1 O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28 Identity = 79/163 (48.47%), Postives = 99/163 (60.74%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TAIR10
Match: AT4G13600.1 (AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 106.7 bits (265), Expect = 2.3e-23 Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TAIR10
Match: AT2G04910.1 (AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. TAIR10
Match: AT5G08000.1 (AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 3) HSP 1 Score: 95.9 bits (237), Expect = 4.1e-20 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. NCBI nr
Match: gi|659092471|ref|XP_008447077.1| (PREDICTED: putative Wiskott-Aldrich syndrome protein family member 4 [Cucumis melo]) HSP 1 Score: 473.8 bits (1218), Expect = 2.1e-130 Identity = 240/265 (90.57%), Postives = 245/265 (92.45%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. NCBI nr
Match: gi|778726065|ref|XP_011659049.1| (PREDICTED: extensin-2-like [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 2.4e-126 Identity = 238/269 (88.48%), Postives = 244/269 (90.71%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. NCBI nr
Match: gi|1000972701|ref|XP_002516415.2| (PREDICTED: extensin [Ricinus communis]) HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66 Identity = 174/325 (53.54%), Postives = 199/325 (61.23%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. NCBI nr
Match: gi|223544450|gb|EEF45970.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 260.0 bits (663), Expect = 4.7e-66 Identity = 157/260 (60.38%), Postives = 172/260 (66.15%), Query Frame = 1
BLAST of Cp4.1LG15g09070 vs. NCBI nr
Match: gi|567859150|ref|XP_006422258.1| (hypothetical protein CICLE_v10005428mg [Citrus clementina]) HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64 Identity = 170/331 (51.36%), Postives = 203/331 (61.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|