Cp4.1LG15g07020 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATGTAGTTCAGAGCTTCTCGATTTGAGACCCAAACTCAAGCCCCATTGCGTATTGAAGATCCATGAAAGCACACCAACACGGGTTCGGGCTTGTGCTTCTTCTGGATTTGGAAGAGGCATTTTGTCAAACATATTATGTGTTGCTTTTTGTCGATGTTGAGTACGGCATGTACGGCATCGTCACGGGTTCGGGTTCGGGCAAGTACGGCATCGTCTTATGCGCCTGCACACCATGTAAGAATTCTAATGATCAATCCATGTAGGAATGATCAAAAGGGGGTAATTCAGTTTTTGAGTGAGATAATGTCAAATTTTTCATTATGATACTTGTCTAGATGCATTTACATACACCTCTTTGATTCTTCGGCATTATATCGATTTGGGTTTTGATTCTTGACATTTAGGAATGCTAGTCTGGCACCTCTTTGATTCTTGAGCATTATAGTAAAGAGAGGTCAGAGGAAGCCATGAATTTGCTTGAAGAAATGGTTGAGAAGCGGATTGAGGCAACTATATACACATACACCATTCCAATAGTTTCATTATGTGATGGCTCGTCGTTCTAGTGAGGCAGTAGAGCTTCACTAATCAGTTTGTGGTTGCAATTGGTCTATATCACAAGATGTTGGCTGATGGATTGGTTCCGACATCTGATGAGGTTGTCTGGACAGTGTTTCTTGTGTCGGATAGGGAAATTATTATAGGTTTATAATCAAGCCTTTTGGTCCAAAACAAAGCTATAAGACTTTAGACTCAAAGTGGACAATATCATACTATGGTCGAGAGTCAAATGGAAAATTTGATTTATTTGATTCCAAGTTTGAAGCTTCTTCATGTCATGGAATCAAGAAATTGCACTCTCAATTTCCAGACACATATTATGTTGGCTGACGAGGTTGTTTGGACAGTGGTTCACTTACTTATTTGAACAACCAGTGTTTTCAATCTTCCAATATAATTATGGACCTTGGTATTACGGGATCCGATATGTCAACCAAGTTAAGGATTGAAGACTATTGCGAGTGAGTCCCGATCATGGGTTTATGCTCAAAGTGGAAAATATCATACCATTGTGTAGAGTCTGTTCATCTAACATTTCCATCCTTAAATGCTCTCAAATGCTCTCAAAGGTATATGTTCATATCACATTTCAAACTCTGCAATGTTCTCAGATGTGCACACTGTCGATAACCATATATATTTTGAAACTTTTTTGCAGAATATGTTGATAGCAATCATTCAGTGGACTCATGAGGCAATTTGAGGCTTCTGGGGTGAAGTGATCATTCCCTTGGCAGGTAAGCTTTCCAGCAGATATTGATTTGGGACAGTAAGGACATGTTTAGCTGATGGGTAATCTTCCTCCTCCCTCCTTAATAATTGTGTCATCGTTAATTGTATTATTGTCCTTCTCTTTCATGTATTATATTGAGGGGCCCTGATTAAAGTCATCTTTAATGCAAAATATTCCTCCTGAACCTTGTCTTGTCCCTTGATTCTCGCTTCCCCTGTCCCATTCAAAAGCCATGAACAAAATATAACTTATGGAAAATATTGAGGGAAGAATAATTTAGAGTTACTTACGGTGTCTATGTAATATGTTTTAAGGTTTATTTAGTGCCTCCTCTTTGTGAGTGAGTGAGGGAAGAATAAGCGGAGTTTAACGTATTAATAAGCGGAGGAAAATAAACTTAGGATTTCAAGAACCAAGTTACTTTACCGTTCTATATAGTTTAGAATGCACGCTTATTGATAAGGTAAGGAATCACTACAAGAGGAATAAGATTCGGATTATCTTGTTGATCGAATATCGAATATCTCAAGGCAAGAACACTTGTTTGAGATTTGAATCACGTGAATGATTCTTGTTGATCAAATATCTCGAGGCAAGAACACTTGTTTGAGATTTGAATCACTCTACAAGCAAGATTGATTGTGTCGAACTACATGCAACTTAGAATTGCAAATTTGGCTAAAGCACAAATGCTCTTTACTATATTTTCCGCAAATACAACATACATGACTTTATATAGCCTCAAAATGAAACTATTAGTCTAACTTACTCTAAATTGTATAACATGGAACTTCATTCTTCTTCAATGTGGCATGAATTGAAATATTTTTTGATAATTTCAACAATATTTTTTTCACATCTTTATTTAAGCATATTGTATGATTGATGTCTCTTGGTTCATATTACTTATAATCATTCAAGCAAGACATAATCGATCTTGCTTGTGGAATGACTCAAAACTCAATCTATTGTTCTTGTCTTGAGACATTCGATCAATGAAATAATTCAAATCTTACTGTGTAGCGATTCCTTGTCACAAATGCTGCATCTTCTTTTCAGCCACGACTGTACTAAATGACACAAACCATTACCTAACCTATTATTCCTCAAGCTTCCTTCCAAACGCTACCATCCATCATTGGTTTGGACTTGTTACACACATTTTCTTTCAATCAAAACCCCTTTTCCCTAATATATTCACCAACCCAACTCTCACTAGAGCAGCATTAAACTCTTGCTATTTGGATTTGCTTTCAAGGCAGCTGATTCTCCTCTGTATGATAAGACCAAAACATTCTAATCCTATTATAAGTACACATTCTCCAGCAGTTGCAGCAGCTTAAACTCGACCGTCGTCATCGACCCTTTTGAGCGTTATGCAGATGAGTAGGCATAGTAGTGAGCCCGCCATTGTTGGTACCTCCATAGCTTTGTTACAAGAAAGGTTCAGGCAGTTGCAGAAAGATAAGGTAAGGAGGGAGAAGAAGGAGGTTGTTAAGCTGTTATCCGATTCAAATAGCTTGTCAACCTCAAGAGACTTGGCCTTCAATTCCCTCTCACTTGGCCTGAATTTGGGTAATGCCGGTAAGCAAGTTGATAGCCATGAAGGCAGGTTGATGCCTGGTGACACCAAGGTGATACCCATTACGTTCAGAAGTTATGATACTCCTGATGTTGATGTTGATGTTGATACCACCCTTCATCTA ATGGGAATTACGGCATGTACGGCATCGTCACGGGTTCGGGTTCGGGCAAGTACGGCATCGTCTTATGCGCCTGCACACCATATGAGTAGGCATAGTAGTGAGCCCGCCATTGTTGGTACCTCCATAGCTTTGTTACAAGAAAGGTTCAGGCAGTTGCAGAAAGATAAGGTAAGGAGGGAGAAGAAGGAGGTTGTTAAGCTGTTATCCGATTCAAATAGCTTGTCAACCTCAAGAGACTTGGCCTTCAATTCCCTCTCACTTGGCCTGAATTTGGGTAATGCCGGTAAGCAAGTTGATAGCCATGAAGGCAGGTTGATGCCTGGTGACACCAAGGTGATACCCATTACGTTCAGAAGTTATGATACTCCTGATGTTGATGTTGATGTTGATACCACCCTTCATCTA ATGGGAATTACGGCATGTACGGCATCGTCACGGGTTCGGGTTCGGGCAAGTACGGCATCGTCTTATGCGCCTGCACACCATATGAGTAGGCATAGTAGTGAGCCCGCCATTGTTGGTACCTCCATAGCTTTGTTACAAGAAAGGTTCAGGCAGTTGCAGAAAGATAAGGTAAGGAGGGAGAAGAAGGAGGTTGTTAAGCTGTTATCCGATTCAAATAGCTTGTCAACCTCAAGAGACTTGGCCTTCAATTCCCTCTCACTTGGCCTGAATTTGGGTAATGCCGGTAAGCAAGTTGATAGCCATGAAGGCAGGTTGATGCCTGGTGACACCAAGGTGATACCCATTACGTTCAGAAGTTATGATACTCCTGATGTTGATGTTGATGTTGATACCACCCTTCATCTA MGITACTASSRVRVRASTASSYAPAHHMSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTSRDLAFNSLSLGLNLGNAGKQVDSHEGRLMPGDTKVIPITFRSYDTPDVDVDVDTTLHL
BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: A0A0A0K617_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272125 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.5e-24 Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: G7KEN3_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_5g097300 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-09 Identity = 54/123 (43.90%), Postives = 70/123 (56.91%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: I3SBI7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06 Identity = 49/131 (37.40%), Postives = 63/131 (48.09%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: I1JJQ3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G305500 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: A0A0B2SHZ1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_025986 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|700189136|gb|KGN44369.1| (hypothetical protein Csa_7G272125 [Cucumis sativus]) HSP 1 Score: 118.2 bits (295), Expect = 1.1e-23 Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|357495321|ref|XP_003617949.1| (hypothetical protein MTR_5g097300 [Medicago truncatula]) HSP 1 Score: 70.1 bits (170), Expect = 3.4e-09 Identity = 54/123 (43.90%), Postives = 70/123 (56.91%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|502099857|ref|XP_004491576.1| (PREDICTED: uncharacterized protein LOC101505296 [Cicer arietinum]) HSP 1 Score: 65.5 bits (158), Expect = 8.3e-08 Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|571442465|ref|XP_006575737.1| (PREDICTED: uncharacterized protein LOC102666892 [Glycine max]) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1
BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|388499126|gb|AFK37629.1| (unknown [Lotus japonicus]) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 49/131 (37.40%), Postives = 63/131 (48.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |