Cp4.1LG15g07020 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g07020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG15 : 7488928 .. 7491933 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGTAGTTCAGAGCTTCTCGATTTGAGACCCAAACTCAAGCCCCATTGCGTATTGAAGATCCATGAAAGCACACCAACACGGGTTCGGGCTTGTGCTTCTTCTGGATTTGGAAGAGGCATTTTGTCAAACATATTATGTGTTGCTTTTTGTCGATGTTGAGTACGGCATGTACGGCATCGTCACGGGTTCGGGTTCGGGCAAGTACGGCATCGTCTTATGCGCCTGCACACCATGTAAGAATTCTAATGATCAATCCATGTAGGAATGATCAAAAGGGGGTAATTCAGTTTTTGAGTGAGATAATGTCAAATTTTTCATTATGATACTTGTCTAGATGCATTTACATACACCTCTTTGATTCTTCGGCATTATATCGATTTGGGTTTTGATTCTTGACATTTAGGAATGCTAGTCTGGCACCTCTTTGATTCTTGAGCATTATAGTAAAGAGAGGTCAGAGGAAGCCATGAATTTGCTTGAAGAAATGGTTGAGAAGCGGATTGAGGCAACTATATACACATACACCATTCCAATAGTTTCATTATGTGATGGCTCGTCGTTCTAGTGAGGCAGTAGAGCTTCACTAATCAGTTTGTGGTTGCAATTGGTCTATATCACAAGATGTTGGCTGATGGATTGGTTCCGACATCTGATGAGGTTGTCTGGACAGTGTTTCTTGTGTCGGATAGGGAAATTATTATAGGTTTATAATCAAGCCTTTTGGTCCAAAACAAAGCTATAAGACTTTAGACTCAAAGTGGACAATATCATACTATGGTCGAGAGTCAAATGGAAAATTTGATTTATTTGATTCCAAGTTTGAAGCTTCTTCATGTCATGGAATCAAGAAATTGCACTCTCAATTTCCAGACACATATTATGTTGGCTGACGAGGTTGTTTGGACAGTGGTTCACTTACTTATTTGAACAACCAGTGTTTTCAATCTTCCAATATAATTATGGACCTTGGTATTACGGGATCCGATATGTCAACCAAGTTAAGGATTGAAGACTATTGCGAGTGAGTCCCGATCATGGGTTTATGCTCAAAGTGGAAAATATCATACCATTGTGTAGAGTCTGTTCATCTAACATTTCCATCCTTAAATGCTCTCAAATGCTCTCAAAGGTATATGTTCATATCACATTTCAAACTCTGCAATGTTCTCAGATGTGCACACTGTCGATAACCATATATATTTTGAAACTTTTTTGCAGAATATGTTGATAGCAATCATTCAGTGGACTCATGAGGCAATTTGAGGCTTCTGGGGTGAAGTGATCATTCCCTTGGCAGGTAAGCTTTCCAGCAGATATTGATTTGGGACAGTAAGGACATGTTTAGCTGATGGGTAATCTTCCTCCTCCCTCCTTAATAATTGTGTCATCGTTAATTGTATTATTGTCCTTCTCTTTCATGTATTATATTGAGGGGCCCTGATTAAAGTCATCTTTAATGCAAAATATTCCTCCTGAACCTTGTCTTGTCCCTTGATTCTCGCTTCCCCTGTCCCATTCAAAAGCCATGAACAAAATATAACTTATGGAAAATATTGAGGGAAGAATAATTTAGAGTTACTTACGGTGTCTATGTAATATGTTTTAAGGTTTATTTAGTGCCTCCTCTTTGTGAGTGAGTGAGGGAAGAATAAGCGGAGTTTAACGTATTAATAAGCGGAGGAAAATAAACTTAGGATTTCAAGAACCAAGTTACTTTACCGTTCTATATAGTTTAGAATGCACGCTTATTGATAAGGTAAGGAATCACTACAAGAGGAATAAGATTCGGATTATCTTGTTGATCGAATATCGAATATCTCAAGGCAAGAACACTTGTTTGAGATTTGAATCACGTGAATGATTCTTGTTGATCAAATATCTCGAGGCAAGAACACTTGTTTGAGATTTGAATCACTCTACAAGCAAGATTGATTGTGTCGAACTACATGCAACTTAGAATTGCAAATTTGGCTAAAGCACAAATGCTCTTTACTATATTTTCCGCAAATACAACATACATGACTTTATATAGCCTCAAAATGAAACTATTAGTCTAACTTACTCTAAATTGTATAACATGGAACTTCATTCTTCTTCAATGTGGCATGAATTGAAATATTTTTTGATAATTTCAACAATATTTTTTTCACATCTTTATTTAAGCATATTGTATGATTGATGTCTCTTGGTTCATATTACTTATAATCATTCAAGCAAGACATAATCGATCTTGCTTGTGGAATGACTCAAAACTCAATCTATTGTTCTTGTCTTGAGACATTCGATCAATGAAATAATTCAAATCTTACTGTGTAGCGATTCCTTGTCACAAATGCTGCATCTTCTTTTCAGCCACGACTGTACTAAATGACACAAACCATTACCTAACCTATTATTCCTCAAGCTTCCTTCCAAACGCTACCATCCATCATTGGTTTGGACTTGTTACACACATTTTCTTTCAATCAAAACCCCTTTTCCCTAATATATTCACCAACCCAACTCTCACTAGAGCAGCATTAAACTCTTGCTATTTGGATTTGCTTTCAAGGCAGCTGATTCTCCTCTGTATGATAAGACCAAAACATTCTAATCCTATTATAAGTACACATTCTCCAGCAGTTGCAGCAGCTTAAACTCGACCGTCGTCATCGACCCTTTTGAGCGTTATGCAGATGAGTAGGCATAGTAGTGAGCCCGCCATTGTTGGTACCTCCATAGCTTTGTTACAAGAAAGGTTCAGGCAGTTGCAGAAAGATAAGGTAAGGAGGGAGAAGAAGGAGGTTGTTAAGCTGTTATCCGATTCAAATAGCTTGTCAACCTCAAGAGACTTGGCCTTCAATTCCCTCTCACTTGGCCTGAATTTGGGTAATGCCGGTAAGCAAGTTGATAGCCATGAAGGCAGGTTGATGCCTGGTGACACCAAGGTGATACCCATTACGTTCAGAAGTTATGATACTCCTGATGTTGATGTTGATGTTGATACCACCCTTCATCTA

mRNA sequence

ATGGGAATTACGGCATGTACGGCATCGTCACGGGTTCGGGTTCGGGCAAGTACGGCATCGTCTTATGCGCCTGCACACCATATGAGTAGGCATAGTAGTGAGCCCGCCATTGTTGGTACCTCCATAGCTTTGTTACAAGAAAGGTTCAGGCAGTTGCAGAAAGATAAGGTAAGGAGGGAGAAGAAGGAGGTTGTTAAGCTGTTATCCGATTCAAATAGCTTGTCAACCTCAAGAGACTTGGCCTTCAATTCCCTCTCACTTGGCCTGAATTTGGGTAATGCCGGTAAGCAAGTTGATAGCCATGAAGGCAGGTTGATGCCTGGTGACACCAAGGTGATACCCATTACGTTCAGAAGTTATGATACTCCTGATGTTGATGTTGATGTTGATACCACCCTTCATCTA

Coding sequence (CDS)

ATGGGAATTACGGCATGTACGGCATCGTCACGGGTTCGGGTTCGGGCAAGTACGGCATCGTCTTATGCGCCTGCACACCATATGAGTAGGCATAGTAGTGAGCCCGCCATTGTTGGTACCTCCATAGCTTTGTTACAAGAAAGGTTCAGGCAGTTGCAGAAAGATAAGGTAAGGAGGGAGAAGAAGGAGGTTGTTAAGCTGTTATCCGATTCAAATAGCTTGTCAACCTCAAGAGACTTGGCCTTCAATTCCCTCTCACTTGGCCTGAATTTGGGTAATGCCGGTAAGCAAGTTGATAGCCATGAAGGCAGGTTGATGCCTGGTGACACCAAGGTGATACCCATTACGTTCAGAAGTTATGATACTCCTGATGTTGATGTTGATGTTGATACCACCCTTCATCTA

Protein sequence

MGITACTASSRVRVRASTASSYAPAHHMSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTSRDLAFNSLSLGLNLGNAGKQVDSHEGRLMPGDTKVIPITFRSYDTPDVDVDVDTTLHL
BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: A0A0A0K617_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272125 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-24
Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 1

Query: 28  MSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSL------------S 87
           M RH+SEP +VGTSIALLQERFRQLQK+K RRE+KE++ LL +SN +            S
Sbjct: 1   MGRHNSEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSS 60

Query: 88  TSRDLAFNSLSLGLNL-GNAGKQV--DSHEGRLMPGDTK------VIPITFRSYDTPDVD 136
           TSRDL  NSLSLGLNL  NAGKQV  D HE R MPGDTK       +  TFRS+D+P   
Sbjct: 61  TSRDLDSNSLSLGLNLENNAGKQVDIDIHEARSMPGDTKFELGNSFMVSTFRSFDSP--- 120

BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: G7KEN3_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_5g097300 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-09
Identity = 54/123 (43.90%), Postives = 70/123 (56.91%), Query Frame = 1

Query: 28  MSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTS---------R 87
           M R  ++P +V +SIALLQERFRQL+K K RRE K++++LLS  N+ S S         R
Sbjct: 1   MGRQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLLRLLSTENNTSASTQRLVVPNNR 60

Query: 88  DLAFNSLSLGLNLGNAGKQVDSHEGRLMPGDTKVIP------ITFRSYDTPDVDVDVDTT 136
               +SLSLGLNL    KQ D      M  +T + P       T R++DT     DVDT+
Sbjct: 61  QTHHDSLSLGLNL--TSKQGDK---STMKSNTSLSPWSQGASSTSRNFDTS----DVDTS 114

BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: I3SBI7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06
Identity = 49/131 (37.40%), Postives = 63/131 (48.09%), Query Frame = 1

Query: 28  MSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNS-------------- 87
           M R   +P +V +SIALLQERFRQL+K K +RE KE+V+LLS S S              
Sbjct: 1   MGRQDDDPTMVNSSIALLQERFRQLEKVKQKREGKELVRLLSSSESQRNTSSSMYNPASQ 60

Query: 88  ------LSTSRDLAFNSLSLGLNLGNAGKQVDSHEGRLMPGDTKVI---PITFRSYDTPD 136
                 L   R +  + LSLGLNL       D +     P  + +      T R +D   
Sbjct: 61  QSMGVRLPPHRSIIHDPLSLGLNLATKQGDHDHNNTMKSPQSSNLWSKGASTSRKFDNYS 120

BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: I1JJQ3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G305500 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1

Query: 28  MSRHSSEPA---IVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTS------- 87
           M R  ++P+    V +SIALLQERFRQL+K K RRE K+++KLLS  ++ S+        
Sbjct: 1   MGRQGNDPSPTTTVNSSIALLQERFRQLEKVKERREGKQLLKLLSSESTSSSQNSQQQQQ 60

Query: 88  -------RDLAFNSLSLGLNLGNAGKQVDSHEGRLM--PGDTKVIP---ITFRSYDTPDV 136
                  R    +SLSLGLN     KQ D H    M  P  + + P    T R++DT   
Sbjct: 61  PRLVAPHRPTLHDSLSLGLNF--TSKQGDHHNTINMKSPPSSNLWPHGASTSRNFDTS-- 120

BLAST of Cp4.1LG15g07020 vs. TrEMBL
Match: A0A0B2SHZ1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_025986 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1

Query: 28  MSRHSSEPA---IVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTS------- 87
           M R  ++P+    V +SIALLQERFRQL+K K RRE K+++KLLS  ++ S+        
Sbjct: 1   MGRQGNDPSPTTTVNSSIALLQERFRQLEKVKERREGKQLLKLLSSESTSSSQNSQQQQQ 60

Query: 88  -------RDLAFNSLSLGLNLGNAGKQVDSHEGRLM--PGDTKVIP---ITFRSYDTPDV 136
                  R    +SLSLGLN     KQ D H    M  P  + + P    T R++DT   
Sbjct: 61  PRLVAPHRPTLHDSLSLGLNF--TSKQGDHHNTINMKSPPSSNLWPHGASTSRNFDTS-- 120

BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|700189136|gb|KGN44369.1| (hypothetical protein Csa_7G272125 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-23
Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 1

Query: 28  MSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSL------------S 87
           M RH+SEP +VGTSIALLQERFRQLQK+K RRE+KE++ LL +SN +            S
Sbjct: 1   MGRHNSEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSS 60

Query: 88  TSRDLAFNSLSLGLNL-GNAGKQV--DSHEGRLMPGDTK------VIPITFRSYDTPDVD 136
           TSRDL  NSLSLGLNL  NAGKQV  D HE R MPGDTK       +  TFRS+D+P   
Sbjct: 61  TSRDLDSNSLSLGLNLENNAGKQVDIDIHEARSMPGDTKFELGNSFMVSTFRSFDSP--- 120

BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|357495321|ref|XP_003617949.1| (hypothetical protein MTR_5g097300 [Medicago truncatula])

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-09
Identity = 54/123 (43.90%), Postives = 70/123 (56.91%), Query Frame = 1

Query: 28  MSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTS---------R 87
           M R  ++P +V +SIALLQERFRQL+K K RRE K++++LLS  N+ S S         R
Sbjct: 1   MGRQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLLRLLSTENNTSASTQRLVVPNNR 60

Query: 88  DLAFNSLSLGLNLGNAGKQVDSHEGRLMPGDTKVIP------ITFRSYDTPDVDVDVDTT 136
               +SLSLGLNL    KQ D      M  +T + P       T R++DT     DVDT+
Sbjct: 61  QTHHDSLSLGLNL--TSKQGDK---STMKSNTSLSPWSQGASSTSRNFDTS----DVDTS 114

BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|502099857|ref|XP_004491576.1| (PREDICTED: uncharacterized protein LOC101505296 [Cicer arietinum])

HSP 1 Score: 65.5 bits (158), Expect = 8.3e-08
Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 1

Query: 28  MSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTSRDLAFN---- 87
           M    ++P +V +SIALLQERFRQL+K K RRE K++V+LLS  N+    R +  N    
Sbjct: 1   MGGQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLVRLLSSQNNTIQQRLVDPNHRPL 60

Query: 88  ----SLSLGLNLGNAGKQVDSHEGRLMPGDTKVIP------ITFRSYDTPDVDVDVDTTL 136
               SLSLGLNL N  KQ D H+  +    + + P       T R++D      DVDT+L
Sbjct: 61  YDHDSLSLGLNLTN--KQSD-HQNNMKLSSSSLSPWSQGESSTSRNFDNYS---DVDTSL 116

BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|571442465|ref|XP_006575737.1| (PREDICTED: uncharacterized protein LOC102666892 [Glycine max])

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1

Query: 28  MSRHSSEPA---IVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNSLSTS------- 87
           M R  ++P+    V +SIALLQERFRQL+K K RRE K+++KLLS  ++ S+        
Sbjct: 1   MGRQGNDPSPTTTVNSSIALLQERFRQLEKVKERREGKQLLKLLSSESTSSSQNSQQQQQ 60

Query: 88  -------RDLAFNSLSLGLNLGNAGKQVDSHEGRLM--PGDTKVIP---ITFRSYDTPDV 136
                  R    +SLSLGLN     KQ D H    M  P  + + P    T R++DT   
Sbjct: 61  PRLVAPHRPTLHDSLSLGLNF--TSKQGDHHNTINMKSPPSSNLWPHGASTSRNFDTS-- 120

BLAST of Cp4.1LG15g07020 vs. NCBI nr
Match: gi|388499126|gb|AFK37629.1| (unknown [Lotus japonicus])

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 49/131 (37.40%), Postives = 63/131 (48.09%), Query Frame = 1

Query: 28  MSRHSSEPAIVGTSIALLQERFRQLQKDKVRREKKEVVKLLSDSNS-------------- 87
           M R   +P +V +SIALLQERFRQL+K K +RE KE+V+LLS S S              
Sbjct: 1   MGRQDDDPTMVNSSIALLQERFRQLEKVKQKREGKELVRLLSSSESQRNTSSSMYNPASQ 60

Query: 88  ------LSTSRDLAFNSLSLGLNLGNAGKQVDSHEGRLMPGDTKVI---PITFRSYDTPD 136
                 L   R +  + LSLGLNL       D +     P  + +      T R +D   
Sbjct: 61  QSMGVRLPPHRSIIHDPLSLGLNLATKQGDHDHNNTMKSPQSSNLWSKGASTSRKFDNYS 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K617_CUCSA7.5e-2459.69Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272125 PE=4 SV=1[more]
G7KEN3_MEDTR2.4e-0943.90Uncharacterized protein OS=Medicago truncatula GN=MTR_5g097300 PE=4 SV=1[more]
I3SBI7_LOTJA1.4e-0637.40Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
I1JJQ3_SOYBN1.4e-0640.77Uncharacterized protein OS=Glycine max GN=GLYMA_02G305500 PE=4 SV=1[more]
A0A0B2SHZ1_GLYSO1.4e-0640.77Uncharacterized protein OS=Glycine soja GN=glysoja_025986 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700189136|gb|KGN44369.1|1.1e-2359.69hypothetical protein Csa_7G272125 [Cucumis sativus][more]
gi|357495321|ref|XP_003617949.1|3.4e-0943.90hypothetical protein MTR_5g097300 [Medicago truncatula][more]
gi|502099857|ref|XP_004491576.1|8.3e-0842.62PREDICTED: uncharacterized protein LOC101505296 [Cicer arietinum][more]
gi|571442465|ref|XP_006575737.1|2.0e-0640.77PREDICTED: uncharacterized protein LOC102666892 [Glycine max][more]
gi|388499126|gb|AFK37629.1|2.0e-0637.40unknown [Lotus japonicus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g07020.1Cp4.1LG15g07020.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 42..62
scor
NoneNo IPR availablePANTHERPTHR34570FAMILY NOT NAMEDcoord: 30..135
score: 1.8

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g07020CmaCh19G008690Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g07020CmoCh11G018330Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g07020CmoCh19G008820Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g07020Bhi05G001279Wax gourdcpewgoB0326
The following gene(s) are paralogous to this gene:

None