Bhi05G001279 (gene) Wax gourd

Overview
NameBhi05G001279
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 50637637 .. 50638451 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTCGCTTCCCCTGGCCCTCTTTACAACCCTATTCAAAAGCCATGAAAAAATAAATCTTTGTTGTGAAAGGAATTGCAAGCGTCCTAAAACACAGGTAAATGCTGCATCTTCTTCTAACCCAAGGCTGTTCTAAATGACAAAAAAAATGACACAAACCATTACCTAACCTTTTATTCCTCAAGCTTCCTTCCAAACACTACCATCCATTTTTGGTTTGGACTTGTTGCATACATTTGCTTTCCATCAAGTCCTTTTCCCTAAAATATTCACCAACTCAACCCTCTCTAGACCAGCCTTTAAACTCTTGCTGTTTGGATTTTCTTGCAAGGTAGCTGATTCTCCTCTGTATCACATCACTAATTATCAATCAGAAAAGACTCCATTCCCCTATTCTAATGATAAGAGCAAAACATTCTAATCCTAATATCCTATAAGTACACATTCTCCAAAACTGTAGACTTCACACTATAAGCAGTTGCAGCTTAAACTCGACCATTGTCACCGACCCTTGAAAGTGTTCTGCAGATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTATTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGAAGCTTCTTAACCTACTATCCGAATCAAATATGGTTGATACCTCGATAATGCATTTAGAAACCAACGGCTCATCAACCTCAAGAGATTTGGACTCTAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGCAAGCTGATATTCATGAAGCCAGATTGATACCTGGTGACGCCAA

mRNA sequence

ATTCTCGCTTCCCCTGGCCCTCTTTACAACCCTATTCAAAAGCCATGAAAAAATAAATCTTTGTTGTGAAAGGAATTGCAAGCGTCCTAAAACACAGATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTATTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGAAGCTTCTTAACCTACTATCCGAATCAAATATGGTTGATACCTCGATAATGCATTTAGAAACCAACGGCTCATCAACCTCAAGAGATTTGGACTCTAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGCAAGCTGATATTCATGAAGCCAGATTGATACCTGGTGACGCCAA

Coding sequence (CDS)

ATTCTCGCTTCCCCTGGCCCTCTTTACAACCCTATTCAAAAGCCATGAAAAAATAAATCTTTGTTGTGAAAGGAATTGCAAGCGTCCTAAAACACAGATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTATTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGAAGCTTCTTAACCTACTATCCGAATCAAATATGGTTGATACCTCGATAATGCATTTAGAAACCAACGGCTCATCAACCTCAAGAGATTTGGACTCTAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGCAAGCTGATATTCATGAAGCCAGATTGATACCTGGTGACGCCAA

Protein sequence

FSLPLALFTTLFKSHEKINLCCERNCKRPKTQMGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMVDTSIMHLETNGSSTSRDLDSNSLSLGLNLQNAGKQADIHEARLIPGDA
Homology
[Close]
BLAST of Bhi05G001279 vs. TrEMBL
Match: tr|A0A0A0K617|A0A0A0K617_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-32
Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMVDTSIMHLETNGSS 92
           MGRH+SEPTMVGTSIALLQERFRQLQK+KQRRE+K+LLNLL ESN VD SIMHLE NGSS
Sbjct: 1   MGRHNSEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSS 60

Query: 93  TSRDLDSNSLSLGLNLQ-NAGKQA--DIHEARLIPGD 127
           TSRDLDSNSLSLGLNL+ NAGKQ   DIHEAR +PGD
Sbjct: 61  TSRDLDSNSLSLGLNLENNAGKQVDIDIHEARSMPGD 97

[Close]
BLAST of Bhi05G001279 vs. TrEMBL
Match: tr|A0A2P6S1J5|A0A2P6S1J5_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0156651 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-10
Identity = 50/94 (53.19%), Postives = 59/94 (62.77%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMVDTSIMHLETNGSS 92
           MGRHSS+P MV +SIALLQERFRQLQK K+RRE+++LL  LSE+  V  S  H E    S
Sbjct: 1   MGRHSSDPIMVSSSIALLQERFRQLQKVKERREEQQLLQFLSETERVAPSTRHFEPARPS 60

Query: 93  TSRDL----------DSNSLSLGLNLQNAGKQAD 117
              D+            +SLSLGLNLQ   KQ D
Sbjct: 61  FQSDMVLPLRPCTPAADSSLSLGLNLQ--PKQVD 92

[Close]
BLAST of Bhi05G001279 vs. TrEMBL
Match: tr|A0A2P4LI66|A0A2P4LI66_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_18427 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.1e-09
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMV------DTSIMHL 92
           MGR S++PTMV +SIALLQERFRQL+K K+RRE+K+LLNL +E+  +      + S +  
Sbjct: 1   MGRQSNDPTMVSSSIALLQERFRQLEKVKERREEKELLNLFAETERIMPTTHFEPSKLSF 60

Query: 93  ETNGSSTSRDLDSNSLSLGLNLQNAGKQADIHEAR------LIPGDA 128
           +   ++ +R    +S SL LNLQ   KQAD+   +      L P DA
Sbjct: 61  QPQMTTPNRSTHRDSPSLELNLQT--KQADVQAMKRPTLTDLWPNDA 105

[Close]
BLAST of Bhi05G001279 vs. TrEMBL
Match: tr|A0A2K3JNM7|A0A2K3JNM7_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g035147 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLL-SESNMVDTSIMHLETNGS 92
           MGR  ++PTMV +SIALLQERFRQL+K K+RRE K+LL LL SESN + +    +  N  
Sbjct: 1   MGRQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLLTLLSSESNTLASQQRLVVPNNK 60

Query: 93  STSRDLDSNSLSLGLNLQNAGKQADIH 119
            T  D    SLSLGLNL    KQ D++
Sbjct: 61  QTHHD----SLSLGLNL--TSKQGDMN 81

[Close]
BLAST of Bhi05G001279 vs. TrEMBL
Match: tr|G7KEN3|G7KEN3_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11418701 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMVDTSIMHLETNGSS 92
           MGR  ++PTMV +SIALLQERFRQL+K K+RRE K+LL LLS  N    S   L      
Sbjct: 1   MGRQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLLRLLSTENNTSASTQRLVV---P 60

Query: 93  TSRDLDSNSLSLGLNLQNAGKQAD 117
            +R    +SLSLGLNL    KQ D
Sbjct: 61  NNRQTHHDSLSLGLNL--TSKQGD 79

[Close]
BLAST of Bhi05G001279 vs. NCBI nr
Match: KGN44369.1 (hypothetical protein Csa_7G272125 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-32
Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMVDTSIMHLETNGSS 92
           MGRH+SEPTMVGTSIALLQERFRQLQK+KQRRE+K+LLNLL ESN VD SIMHLE NGSS
Sbjct: 1   MGRHNSEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSS 60

Query: 93  TSRDLDSNSLSLGLNLQ-NAGKQA--DIHEARLIPGD 127
           TSRDLDSNSLSLGLNL+ NAGKQ   DIHEAR +PGD
Sbjct: 61  TSRDLDSNSLSLGLNLENNAGKQVDIDIHEARSMPGD 97

[Close]
BLAST of Bhi05G001279 vs. NCBI nr
Match: PRQ52543.1 (hypothetical protein RchiOBHm_Chr2g0156651 [Rosa chinensis])

HSP 1 Score: 73.9 bits (180), Expect = 4.3e-10
Identity = 50/94 (53.19%), Postives = 59/94 (62.77%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMVDTSIMHLETNGSS 92
           MGRHSS+P MV +SIALLQERFRQLQK K+RRE+++LL  LSE+  V  S  H E    S
Sbjct: 1   MGRHSSDPIMVSSSIALLQERFRQLQKVKERREEQQLLQFLSETERVAPSTRHFEPARPS 60

Query: 93  TSRDL----------DSNSLSLGLNLQNAGKQAD 117
              D+            +SLSLGLNLQ   KQ D
Sbjct: 61  FQSDMVLPLRPCTPAADSSLSLGLNLQ--PKQVD 92

[Close]
BLAST of Bhi05G001279 vs. NCBI nr
Match: XP_023916992.1 (uncharacterized protein LOC112028527 [Quercus suber] >POF04971.1 hypothetical protein CFP56_18427 [Quercus suber])

HSP 1 Score: 70.1 bits (170), Expect = 6.2e-09
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMV------DTSIMHL 92
           MGR S++PTMV +SIALLQERFRQL+K K+RRE+K+LLNL +E+  +      + S +  
Sbjct: 1   MGRQSNDPTMVSSSIALLQERFRQLEKVKERREEKELLNLFAETERIMPTTHFEPSKLSF 60

Query: 93  ETNGSSTSRDLDSNSLSLGLNLQNAGKQADIHEAR------LIPGDA 128
           +   ++ +R    +S SL LNLQ   KQAD+   +      L P DA
Sbjct: 61  QPQMTTPNRSTHRDSPSLELNLQT--KQADVQAMKRPTLTDLWPNDA 105

[Close]
BLAST of Bhi05G001279 vs. NCBI nr
Match: PNX55627.1 (hypothetical protein L195_g049257 [Trifolium pratense] >PNX79163.1 hypothetical protein L195_g035147, partial [Trifolium pratense] >PNX89392.1 hypothetical protein L195_g045511 [Trifolium pratense])

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-08
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLL-SESNMVDTSIMHLETNGS 92
           MGR  ++PTMV +SIALLQERFRQL+K K+RRE K+LL LL SESN + +    +  N  
Sbjct: 1   MGRQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLLTLLSSESNTLASQQRLVVPNNK 60

Query: 93  STSRDLDSNSLSLGLNLQNAGKQADIH 119
            T  D    SLSLGLNL    KQ D++
Sbjct: 61  QTHHD----SLSLGLNL--TSKQGDMN 81

[Close]
BLAST of Bhi05G001279 vs. NCBI nr
Match: XP_003617949.1 (uncharacterized protein LOC11418701 [Medicago truncatula] >AET00908.1 hypothetical protein MTR_5g097300 [Medicago truncatula])

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-08
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 0 

Query: 33  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKKLLNLLSESNMVDTSIMHLETNGSS 92
           MGR  ++PTMV +SIALLQERFRQL+K K+RRE K+LL LLS  N    S   L      
Sbjct: 1   MGRQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLLRLLSTENNTSASTQRLVV---P 60

Query: 93  TSRDLDSNSLSLGLNLQNAGKQAD 117
            +R    +SLSLGLNL    KQ D
Sbjct: 61  NNRQTHHDSLSLGLNL--TSKQGD 79

The following BLAST results are available for this feature:
BLAST of Bhi05G001279 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G001279 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G001279 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K617|A0A0A0K617_CUCSA2.0e-3284.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1[more]
tr|A0A2P6S1J5|A0A2P6S1J5_ROSCH2.8e-1053.19Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0156651 PE=4... [more]
tr|A0A2P4LI66|A0A2P4LI66_QUESU4.1e-0944.86Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_18427 PE=4 SV=1[more]
tr|A0A2K3JNM7|A0A2K3JNM7_TRIPR1.2e-0854.02Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g035147 PE=4 SV=1[more]
tr|G7KEN3|G7KEN3_MEDTR1.2e-0853.57Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11418701 PE=4 SV=1[more]
BLAST of Bhi05G001279 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44369.13.0e-3284.54hypothetical protein Csa_7G272125 [Cucumis sativus][more]
PRQ52543.14.3e-1053.19hypothetical protein RchiOBHm_Chr2g0156651 [Rosa chinensis][more]
XP_023916992.16.2e-0944.86uncharacterized protein LOC112028527 [Quercus suber] >POF04971.1 hypothetical pr... [more]
PNX55627.11.8e-0854.02hypothetical protein L195_g049257 [Trifolium pratense] >PNX79163.1 hypothetical ... [more]
XP_003617949.11.8e-0853.57uncharacterized protein LOC11418701 [Medicago truncatula] >AET00908.1 hypothetic... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001279Bhi05M001279mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67
NoneNo IPR availablePANTHERPTHR34570:SF6SUBFAMILY NOT NAMEDcoord: 33..120
NoneNo IPR availablePANTHERPTHR34570FAMILY NOT NAMEDcoord: 33..120

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi05G001279CmaCh19G008690Cucurbita maxima (Rimu)cmawgoB0652
Bhi05G001279CmoCh11G018330Cucurbita moschata (Rifu)cmowgoB0116
Bhi05G001279Cp4.1LG15g07020Cucurbita pepo (Zucchini)cpewgoB0326
Bhi05G001279Cla015677Watermelon (97103) v1wgowmB272
Bhi05G001279Cla97C02G029210Watermelon (97103) v2wgowmbB241
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G001279Wax gourdwgowgoB070
Bhi05G001279Cucumber (Gy14) v1cgywgoB208
Bhi05G001279Cucumber (Gy14) v1cgywgoB145
Bhi05G001279Cucumber (Gy14) v2cgybwgoB536
Bhi05G001279Cucumber (Gy14) v2cgybwgoB641
Bhi05G001279Cucurbita maxima (Rimu)cmawgoB0115
Bhi05G001279Cucurbita maxima (Rimu)cmawgoB0678
Bhi05G001279Cucurbita moschata (Rifu)cmowgoB0653
Bhi05G001279Cucurbita moschata (Rifu)cmowgoB0674
Bhi05G001279Cucurbita pepo (Zucchini)cpewgoB0349
Bhi05G001279Cucurbita pepo (Zucchini)cpewgoB0852
Bhi05G001279Wild cucumber (PI 183967)cpiwgoB566
Bhi05G001279Wild cucumber (PI 183967)cpiwgoB681
Bhi05G001279Cucumber (Chinese Long) v3cucwgoB579
Bhi05G001279Cucumber (Chinese Long) v3cucwgoB695
Bhi05G001279Cucumber (Chinese Long) v2cuwgoB561
Bhi05G001279Cucumber (Chinese Long) v2cuwgoB670
Bhi05G001279Bottle gourd (USVL1VR-Ls)lsiwgoB064
Bhi05G001279Bottle gourd (USVL1VR-Ls)lsiwgoB118
Bhi05G001279Melon (DHL92) v3.6.1medwgoB108
Bhi05G001279Melon (DHL92) v3.6.1medwgoB212
Bhi05G001279Melon (DHL92) v3.5.1mewgoB107
Bhi05G001279Melon (DHL92) v3.5.1mewgoB212
Bhi05G001279Watermelon (Charleston Gray)wcgwgoB266
Bhi05G001279Watermelon (97103) v2wgowmbB256
Bhi05G001279Silver-seed gourdcarwgoB0251
Bhi05G001279Silver-seed gourdcarwgoB0429
Bhi05G001279Silver-seed gourdcarwgoB1253