Cp4.1LG15g06140 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g06140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG15 : 6779270 .. 6780477 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATTCAATTTGAACCAATGACGGCCGCTCTTTCCGCCGGCGCAGCCTCTCCGACATCACCGGGTCACCGGCTCGGTTCGAACTTCATCGGAAAATTGAATCAATGGAAAGGCGTTGGCATTTCACAAATCTTTCGAACATTTTCGATGAGGGGAACGCTGATGCAAGCTGGTTCGTGAGCCGATGACTCTGCGACGTTCGAGATATCCGTGGAAAATGCTCTCCATGTTCTTGGAGTCTCCGATGAGGCCTCGTTCGATGATATTCTTCGTGCTAGGAAGTCGATTATGGCCGCTTGCAAGGACGACCAAGAAACAGTCGCGCAGGTAGAAGGAGTTCGATTTTTTTTACTTCGTTTGGGGAATTTTGGTATTTTAGGGATTTAAATATTGCGTTCCCTTTGATTTGAGTATTGGCATTCGAAATTGGGAAGTCCGATTGATTTGGTAATTATTCGTGTGATCTTTGTGTGTGTGTGTGTGTGTTTCTATATGCTACTAATATGATCGGCATGGAGCTTGCGAACTTTTTGAGCGAGTTAAGCTTTCCTTTTGTTTTGCCAACACTCTATAGAATGGCTATTACCACTTTAGCAACGATCTTTGAGTTTCTGGCTCCGGCGGCAATTAGATTCGAACAAATTCAGATACTTGCTACTGCATGAGGAGGCAGTTATGGTTTTGAACGAAATACCGTACATGGATTATTAGATTTATTTGCATGTAGCTTTGTAGTTTCTTTGTATTTTTTTTTACCAAAAGGAACGTGAAGCTTGGTAAGGAGTTCTGCTAGTGCTAATTCTTTGTGCTTTTTAGTTCTTACAAGATTTGGATGCAAGTAAATCTTCACAAATTTGGAGAACAATTGAAGAAATCGCACATTTTTTCTGCTTGCGAATACTGTTGAGGTTTTGTGAAATAAACTTGATGCTTGCGAATACTGCGTCTATTTCCTTTCGAATCAAAATTTATTTTTTATGCTACATGTGATATTTATTTATCCTATTTGTGTTACATATATTCATGAACTTTGACATAAATGAAGTGATTTCGTTTCTTGTGCACAAAAGTATGCTGAGAAATACAGATCTCACGTCTTGGAGCCATTGTATAGATCGTGCAATTTTCATATGATAATATTTGCAATTTTCTCTCTGCTGTTCTTCTTTGCAGGTGCAGTAGTCGGTTCTGCAGTTGAGAATTGA

mRNA sequence

ATGTTGATTCAATTTGAACCAATGACGGCCGCTCTTTCCGCCGGCGCAGCCTCTCCGACATCACCGGGTCACCGGCTCGGTTCGAACTTCATCGGAAAATTGAATCAATGGAAAGGCGTTGGCATTTCACAAATCTTTCGAACATTTTCGATGAGGGGAACGCTGATGCAAGCTGGTGCAGTAGTCGGTTCTGCAGTTGAGAATTGA

Coding sequence (CDS)

ATGTTGATTCAATTTGAACCAATGACGGCCGCTCTTTCCGCCGGCGCAGCCTCTCCGACATCACCGGGTCACCGGCTCGGTTCGAACTTCATCGGAAAATTGAATCAATGGAAAGGCGTTGGCATTTCACAAATCTTTCGAACATTTTCGATGAGGGGAACGCTGATGCAAGCTGGTGCAGTAGTCGGTTCTGCAGTTGAGAATTGA

Protein sequence

MLIQFEPMTAALSAGAASPTSPGHRLGSNFIGKLNQWKGVGISQIFRTFSMRGTLMQAGAVVGSAVEN
BLAST of Cp4.1LG15g06140 vs. NCBI nr
Match: gi|659094185|ref|XP_008447928.1| (PREDICTED: uncharacterized protein LOC103490266 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 5.1e-06
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1

Query: 12 LSAGAASPTSPGHRLGSNFIGKLNQWKGVGISQIFRTFSMRGTLMQAGA 61
          LS GAA PT P HRL S F+GK    KGV ISQ+F+T +M  TL+QAG+
Sbjct: 12 LSGGAAFPTLPAHRLVSTFLGKFTPLKGVSISQVFQTPAMTATLVQAGS 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659094185|ref|XP_008447928.1|5.1e-0659.18PREDICTED: uncharacterized protein LOC103490266 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g06140.1Cp4.1LG15g06140.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g06140CmoCh19G007640Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g06140Bhi05G001455Wax gourdcpewgoB0326
The following gene(s) are paralogous to this gene:

None