Cp4.1LG15g04580 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAACAAGATCATCTTCTTCCTTTTATCCTCTCTCTTTCTCTTTCAGGCTGTTTCTGCCGTTGAGTACACCGTCACGAACGATGCGATCGGAACCCCTGGCGGTATCTGTTTTGACAACGAAATCGGAGCGGATTACAGCCGGCAGATATTGGCAGCTGCCACTAATTTGATTTGGAACATTTTCCGACAAAGCTCCGATGATGATCGGAAGAATGTGCAGAAGGTCAGCCTGTTCATCGATAGAGACTATGATGGAGTGGCGTTTGCTAGCAACGACGAGATTCATGTCGGTGCTGACTATATTGCTAACTATGACGGGGACTTGAAGAAGGAAATAACAGGTATTAATATATTTTAATTTTATATCTAATAAATTTATTTCATAATTTTTGGATTTTTTTCTTAAAAATGTAAAATTAAACCTTTAGAATTTTTAAATATTGAGAGTTTTAAGAATTTATTAAACATAAAATATAAATTTAAGGATTTTGACAAAAATATCCCTAAATTTTAGATTTTGGCTAATTTTTAAAATTTTTGATAATAATTTTAAATTAAAAATAAAAAATAAAAAACATCCTTACATTTTCAAAAATTAAAAATATTATAGGTTAGTTTTAGATAAAATTAATTAATATTTTATTTAAAAATACACTTATTCTAAAGTCTAAAAAATATCCATTATAAAATAAAAATTTATTATACCTTTAAATTTTTTAAAAATTTTAAAAAACACATTTTTAACTTTTAAAAAATATTTAAAGATAATTTATGAAAATAGATTTCAAAAGTACTCGTAAATTAAAAAAAAAAAACATTAATATATTTAGAAAAAGGTTTAAATAATTTTTAAAATTGAAAAAAAAAATGATCTATGAAATGTAAATAATAGTTTATGTGCATCTATAAAGTGTAAAGAGATATTTTTATCCACAGTAAAAATTAAAAATTTTAAATAAATGACTGAGAAGATAAATATTACTTTTGAGAGTCAAATATATTTTTTATTTTTTAATAAAAAAATATAACAGGTATTAATCAAACTTTTAAAAATAAAAAATACTTTTAAAATATTTATAAAAATTAAAGATATTTTTGAAGCAAATAATAACTATTTCCATCCCAAATTAATAATAATAATAATAATAATAAATAAATAAATAAATAAATAAACAAATATATATATATATATATATATATATATTTTTTTTTTTTTGAGGACAGGAGTGCTATACCACGAAATGACCCATATTTGGCAATGGAACGGGAACCCAAGTGCACCGGGCGGGCTGATCGAAGGGATCGCGGACTACGTACGGCTGAAGTCGGGGTATATTCCGGGGCACTGGGTGGGGCCGGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCCAGATTTTTGGACTATTTAGAGGGGTTGAGAAGTGGGTTCGTTGCAGAGCTGAACCGGAGGCTCAAAAATGGCTACTCCGCCGATTACTTCCTGCAGTTGCTCGGAAAGCCGGTGGATCAGCTCTGGGCAGATTACAAGGCCGCGTTCGGAAATTAG ATGGCTTCCAACAAGATCATCTTCTTCCTTTTATCCTCTCTCTTTCTCTTTCAGGCTGTTTCTGCCGTTGAGTACACCGTCACGAACGATGCGATCGGAACCCCTGGCGGTATCTGTTTTGACAACGAAATCGGAGCGGATTACAGCCGGCAGATATTGGCAGCTGCCACTAATTTGATTTGGAACATTTTCCGACAAAGCTCCGATGATGATCGGAAGAATGTGCAGAAGGTCAGCCTGTTCATCGATAGAGACTATGATGGAGTGGCGTTTGCTAGCAACGACGAGATTCATGTCGGTGCTGACTATATTGCTAACTATGACGGGGACTTGAAGAAGGAAATAACAGGAGTGCTATACCACGAAATGACCCATATTTGGCAATGGAACGGGAACCCAAGTGCACCGGGCGGGCTGATCGAAGGGATCGCGGACTACGTACGGCTGAAGTCGGGGTATATTCCGGGGCACTGGGTGGGGCCGGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCCAGATTTTTGGACTATTTAGAGGGGTTGAGAAGTGGGTTCGTTGCAGAGCTGAACCGGAGGCTCAAAAATGGCTACTCCGCCGATTACTTCCTGCAGTTGCTCGGAAAGCCGGTGGATCAGCTCTGGGCAGATTACAAGGCCGCGTTCGGAAATTAG ATGGCTTCCAACAAGATCATCTTCTTCCTTTTATCCTCTCTCTTTCTCTTTCAGGCTGTTTCTGCCGTTGAGTACACCGTCACGAACGATGCGATCGGAACCCCTGGCGGTATCTGTTTTGACAACGAAATCGGAGCGGATTACAGCCGGCAGATATTGGCAGCTGCCACTAATTTGATTTGGAACATTTTCCGACAAAGCTCCGATGATGATCGGAAGAATGTGCAGAAGGTCAGCCTGTTCATCGATAGAGACTATGATGGAGTGGCGTTTGCTAGCAACGACGAGATTCATGTCGGTGCTGACTATATTGCTAACTATGACGGGGACTTGAAGAAGGAAATAACAGGAGTGCTATACCACGAAATGACCCATATTTGGCAATGGAACGGGAACCCAAGTGCACCGGGCGGGCTGATCGAAGGGATCGCGGACTACGTACGGCTGAAGTCGGGGTATATTCCGGGGCACTGGGTGGGGCCGGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCCAGATTTTTGGACTATTTAGAGGGGTTGAGAAGTGGGTTCGTTGCAGAGCTGAACCGGAGGCTCAAAAATGGCTACTCCGCCGATTACTTCCTGCAGTTGCTCGGAAAGCCGGTGGATCAGCTCTGGGCAGATTACAAGGCCGCGTTCGGAAATTAG MASNKIIFFLLSSLFLFQAVSAVEYTVTNDAIGTPGGICFDNEIGADYSRQILAAATNLIWNIFRQSSDDDRKNVQKVSLFIDRDYDGVAFASNDEIHVGADYIANYDGDLKKEITGVLYHEMTHIWQWNGNPSAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSRWDQGYDVTARFLDYLEGLRSGFVAELNRRLKNGYSADYFLQLLGKPVDQLWADYKAAFGN
BLAST of Cp4.1LG15g04580 vs. Swiss-Prot
Match: BSP_BOSSE (Basic secretory protease (Fragments) OS=Boswellia serrata PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09 Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TrEMBL
Match: A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 1.2e-106 Identity = 185/224 (82.59%), Postives = 202/224 (90.18%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TrEMBL
Match: A0A0A0K322_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072800 PE=4 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 1.3e-89 Identity = 164/230 (71.30%), Postives = 194/230 (84.35%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TrEMBL
Match: V4SBG5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029208mg PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85 Identity = 153/222 (68.92%), Postives = 179/222 (80.63%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TrEMBL
Match: A0A0A0K7U8_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072780 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 9.8e-85 Identity = 150/227 (66.08%), Postives = 180/227 (79.30%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TrEMBL
Match: A0A151U7P9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_008042 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 2.2e-84 Identity = 142/222 (63.96%), Postives = 180/222 (81.08%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TAIR10
Match: AT2G15220.1 (AT2G15220.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 273.1 bits (697), Expect = 1.6e-73 Identity = 124/220 (56.36%), Postives = 165/220 (75.00%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TAIR10
Match: AT2G15130.1 (AT2G15130.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 251.5 bits (641), Expect = 4.8e-67 Identity = 117/226 (51.77%), Postives = 163/226 (72.12%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. TAIR10
Match: AT2G15170.1 (AT2G15170.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08 Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. NCBI nr
Match: gi|449438369|ref|XP_004136961.1| (PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus]) HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106 Identity = 185/224 (82.59%), Postives = 202/224 (90.18%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. NCBI nr
Match: gi|659109990|ref|XP_008454989.1| (PREDICTED: uncharacterized protein LOC103495269 [Cucumis melo]) HSP 1 Score: 377.9 bits (969), Expect = 1.3e-101 Identity = 177/224 (79.02%), Postives = 196/224 (87.50%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. NCBI nr
Match: gi|778725010|ref|XP_011658890.1| (PREDICTED: uncharacterized protein LOC105434420 [Cucumis sativus]) HSP 1 Score: 337.4 bits (864), Expect = 1.9e-89 Identity = 164/230 (71.30%), Postives = 194/230 (84.35%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. NCBI nr
Match: gi|700188660|gb|KGN43893.1| (hypothetical protein Csa_7G072800 [Cucumis sativus]) HSP 1 Score: 337.4 bits (864), Expect = 1.9e-89 Identity = 164/230 (71.30%), Postives = 194/230 (84.35%), Query Frame = 1
BLAST of Cp4.1LG15g04580 vs. NCBI nr
Match: gi|568867323|ref|XP_006486988.1| (PREDICTED: uncharacterized protein LOC102627881 [Citrus sinensis]) HSP 1 Score: 325.9 bits (834), Expect = 5.7e-86 Identity = 154/222 (69.37%), Postives = 180/222 (81.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |