Carg16354 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAACAAGATCATCTTCTTCCTTTTTCCCTCTCTCTTCCTCCTGCAGGCTGTTTCTGCCGTTGAGTACACCGTCACCAACGACGCGATCGGAACTCCGGGCGGTATCCGCTTCGACAACGAAATCGGAGTGGATTACAGCCGGCAGATATTGGCAGCTGCCACTGATTTTATTTGGAACATTTTCCGACAAAACTTCGATGATGATCGGAAGAATGTGCAAAAGGTCAGCCTGTTCATTGATAGAAACTATGACGGAGTGGCGTTTGCTAGCAACGACAAAATTCATGTCGGTGCTGACTATATTGCTAACTATGACGGGGACTTGAAGAAGGAAATAACAGGTATTAATATATTTTAATTTTATGTCAAATAAATTTGTTCATTAATTTAAAAATTTTTCTTTCAAAATGTAAAATTAAACCTTTAAACTTTTTAAATATTGAGAGTTTTGAGAATTTATTAAATTAAAATATAAATTTAAGGATTTTGACAAAAGTATCCCTATTTTAGATTTTGGCTAATTTTTAAAATTTTTTATAATAATTTTAAATTTAAAAAAATAAAAAATATTATAGGTTAGTTTTAGATAAAATTAATTAATATTTTATTTAAAAATACACTTATTCTAAAGTCTAAAAAATATCCATTATCTTTAAAATAAAAATTTATTATACCTTTAAATTTTTAAAAAATCTTAAAAAACACATTTTAAACTTTTAAAGATAATTTATGAAAATAGATTTAAAAAGTACTCATAAATTTAAAAAAAAACATTAACATATGTAAACTTTTTAGAAAAAAGTTTAAATTATTTTTACTATTAATATATTTAAAATTGAAGAAAAAATAATCTATAAAATGTAAATAAATAGTTTACGGCCATTTATGAGATGTACATAGATAATTTTCATCACGGTAAGAATTAAATATTTTAAATAAATATCTGAGAAGGTAAATATTACTTTTGAGAGTTTGATGTATATTTTGATTTTTTAATTTAAAAAATAACGTGTATTAATGAAAGTTTTTATAAATATTTATAAAAGAAAATAATAACTATTTCCATTCCAAATTAATAATAATAATAATAATAAATAAATAAACAAACAAATAAATAAATAAATTTATTTATTTATTTGTTTGAGAACAGGAGTGCTATACCACGAAATGACCCATATTTGGCAATGGAACGGGAACCCAAGTGCACCGGGCGGGCTGATCGAAGGGATCGCGGACTACGTACGGCTTAAGTCGGGGTATATTCCGGGGCACTGGGTGGGGCCGGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCCAGATTTTTGGACTATTTAGAGGGGCTGAGAAGTGGGTTCGTTGCAGAGCTGAACCGGTGGCTCAAAAATGGCTACTCCGCCGATTACTTCCTGCAGTTGCTCGGAAAGCCGGTGGATCAGCTCTGGGCAGATTACAAGGCCGCGTTCGGAAATTAG ATGGCTTCCAACAAGATCATCTTCTTCCTTTTTCCCTCTCTCTTCCTCCTGCAGGCTGTTTCTGCCGTTGAGTACACCGTCACCAACGACGCGATCGGAACTCCGGGCGGTATCCGCTTCGACAACGAAATCGGAGTGGATTACAGCCGGCAGATATTGGCAGCTGCCACTGATTTTATTTGGAACATTTTCCGACAAAACTTCGATGATGATCGGAAGAATGTGCAAAAGGTCAGCCTGTTCATTGATAGAAACTATGACGGAGTGGCGTTTGCTAGCAACGACAAAATTCATGTCGGTGCTGACTATATTGCTAACTATGACGGGGACTTGAAGAAGGAAATAACAGGAGTGCTATACCACGAAATGACCCATATTTGGCAATGGAACGGGAACCCAAGTGCACCGGGCGGGCTGATCGAAGGGATCGCGGACTACGTACGGCTTAAGTCGGGGTATATTCCGGGGCACTGGGTGGGGCCGGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCCAGATTTTTGGACTATTTAGAGGGGCTGAGAAGTGGGTTCGTTGCAGAGCTGAACCGGTGGCTCAAAAATGGCTACTCCGCCGATTACTTCCTGCAGTTGCTCGGAAAGCCGGTGGATCAGCTCTGGGCAGATTACAAGGCCGCGTTCGGAAATTAG ATGGCTTCCAACAAGATCATCTTCTTCCTTTTTCCCTCTCTCTTCCTCCTGCAGGCTGTTTCTGCCGTTGAGTACACCGTCACCAACGACGCGATCGGAACTCCGGGCGGTATCCGCTTCGACAACGAAATCGGAGTGGATTACAGCCGGCAGATATTGGCAGCTGCCACTGATTTTATTTGGAACATTTTCCGACAAAACTTCGATGATGATCGGAAGAATGTGCAAAAGGTCAGCCTGTTCATTGATAGAAACTATGACGGAGTGGCGTTTGCTAGCAACGACAAAATTCATGTCGGTGCTGACTATATTGCTAACTATGACGGGGACTTGAAGAAGGAAATAACAGGAGTGCTATACCACGAAATGACCCATATTTGGCAATGGAACGGGAACCCAAGTGCACCGGGCGGGCTGATCGAAGGGATCGCGGACTACGTACGGCTTAAGTCGGGGTATATTCCGGGGCACTGGGTGGGGCCGGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCCAGATTTTTGGACTATTTAGAGGGGCTGAGAAGTGGGTTCGTTGCAGAGCTGAACCGGTGGCTCAAAAATGGCTACTCCGCCGATTACTTCCTGCAGTTGCTCGGAAAGCCGGTGGATCAGCTCTGGGCAGATTACAAGGCCGCGTTCGGAAATTAG MASNKIIFFLFPSLFLLQAVSAVEYTVTNDAIGTPGGIRFDNEIGVDYSRQILAAATDFIWNIFRQNFDDDRKNVQKVSLFIDRNYDGVAFASNDKIHVGADYIANYDGDLKKEITGVLYHEMTHIWQWNGNPSAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSRWDQGYDVTARFLDYLEGLRSGFVAELNRWLKNGYSADYFLQLLGKPVDQLWADYKAAFGN
BLAST of Carg16354 vs. NCBI nr
Match: XP_022972382.1 (uncharacterized protein LOC111470952 [Cucurbita maxima]) HSP 1 Score: 452.2 bits (1162), Expect = 1.0e-123 Identity = 214/226 (94.69%), Postives = 218/226 (96.46%), Query Frame = 0
BLAST of Carg16354 vs. NCBI nr
Match: XP_023553848.1 (uncharacterized protein LOC111811302 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 450.3 bits (1157), Expect = 3.9e-123 Identity = 214/226 (94.69%), Postives = 218/226 (96.46%), Query Frame = 0
BLAST of Carg16354 vs. NCBI nr
Match: XP_022952790.1 (uncharacterized protein LOC111455381 [Cucurbita moschata]) HSP 1 Score: 444.5 bits (1142), Expect = 2.1e-121 Identity = 213/228 (93.42%), Postives = 220/228 (96.49%), Query Frame = 0
BLAST of Carg16354 vs. NCBI nr
Match: XP_022148820.1 (uncharacterized protein LOC111017379 [Momordica charantia]) HSP 1 Score: 417.2 bits (1071), Expect = 3.7e-113 Identity = 196/226 (86.73%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of Carg16354 vs. NCBI nr
Match: XP_004136961.1 (PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus] >KGN43894.1 NtPRp27-like protein [Cucumis sativus]) HSP 1 Score: 396.7 bits (1018), Expect = 5.1e-107 Identity = 185/224 (82.59%), Postives = 204/224 (91.07%), Query Frame = 0
BLAST of Carg16354 vs. TAIR10
Match: AT2G15220.1 (Plant basic secretory protein (BSP) family protein) HSP 1 Score: 277.3 bits (708), Expect = 8.2e-75 Identity = 126/220 (57.27%), Postives = 165/220 (75.00%), Query Frame = 0
BLAST of Carg16354 vs. TAIR10
Match: AT2G15130.1 (Plant basic secretory protein (BSP) family protein) HSP 1 Score: 256.1 bits (653), Expect = 2.0e-68 Identity = 120/226 (53.10%), Postives = 163/226 (72.12%), Query Frame = 0
BLAST of Carg16354 vs. TAIR10
Match: AT2G15170.1 (Plant basic secretory protein (BSP) family protein) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10 Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Carg16354 vs. Swiss-Prot
Match: sp|C0HJG8|BSP_BOSSE (Basic secretory protease (Fragments) OS=Boswellia serrata OX=613112 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09 Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 0
BLAST of Carg16354 vs. TrEMBL
Match: tr|A0A0A0K4M0|A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G072810 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 3.4e-107 Identity = 185/224 (82.59%), Postives = 204/224 (91.07%), Query Frame = 0
BLAST of Carg16354 vs. TrEMBL
Match: tr|A0A1S3C0K2|A0A1S3C0K2_CUCME (uncharacterized protein LOC103495269 OS=Cucumis melo OX=3656 GN=LOC103495269 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 2.5e-102 Identity = 177/224 (79.02%), Postives = 198/224 (88.39%), Query Frame = 0
BLAST of Carg16354 vs. TrEMBL
Match: tr|A0A0A0K322|A0A0A0K322_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072800 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 1.2e-88 Identity = 162/230 (70.43%), Postives = 191/230 (83.04%), Query Frame = 0
BLAST of Carg16354 vs. TrEMBL
Match: tr|A0A2I4F785|A0A2I4F785_9ROSI (uncharacterized protein LOC108996194 OS=Juglans regia OX=51240 GN=LOC108996194 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 7.9e-88 Identity = 151/213 (70.89%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Carg16354 vs. TrEMBL
Match: tr|A0A0A0K7U8|A0A0A0K7U8_CUCSA (NtPRp27-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G072780 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 5.6e-86 Identity = 152/227 (66.96%), Postives = 180/227 (79.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|