Cp4.1LG15g04160 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCGGCTACAGCAGTGCCTCATCTGCGACCCGATCCCTCAACTTGGCGTTTATCTTCCAAAATCGGAATCCCCTTTGTCACTTCCTTTCCTGGGAAGATCGTACTCTGTTCCCAATTCTGAGAGCTTCATCGGAATCAATGGCGGCTTCTTATCCCAAGCTCCAGCTTCGGAAGCTGGGAAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGTGCCTCGCCTCTCGGCAGCGTCTTCGGCCCTGTTTCTGAGGAGGATGCCGTCGCCTCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCTCCGTATGGAATTCGTAACTGTTGTTTTCCTATTCACTTAGTGAGAGAGGCTTTCTTATGAAATTGACGAGTTTCTACATCAAACAATAGAGATAGAGTTTTGAGAATTTGTTCAATGCTTGGTCTTGCATGTTCATTTATTTGGACTTGACTTTGTGCCTGCTTGATTTTCGTCGAAATTTGTTGGCTCGATTTGGCTCTAGCAAGTTTTGTGTTGCTTTTTTGTTGAGATTTGTTTAGGTAAATGTAAGTTGTAACAAAGATTTGAAATATTGCTACGTGTATCCAGGTTTGATGTCCGATTTGATGTTATTGAAAGTTTAGATATGGAAGAGCCAATGGCTTTCGGAAAATATAAATCATTCCATTTTTTATATGTTTAGTTCATCGGTAAGGATATGTAAGGGCTAGTTTGGTTATCTTCTATATGATTTCTGGCTCTAGCACTGAATTTGGGTTTGCCTCTTCGACGACATGCGTGAAGGTACTATGGAGGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTAAAAGCTCTAGATGTTCCAAGGAGTGAATATATAGTGTCAACAAAGTGTGGGAGATATGCTGAGGGTTTTGATTTCAGTGCTGAGAGGGTAACAAGGAGCATTGATGAGAGTTTGGCTAGGCTACAACTAGATTATGTCGATATACTGCATTGCCATGATATCGAATTTGGATCTCTTGATCAGGTTTGTTACTTTTCTTAAGAACTCATTGACCATTGAATTTTAGTTATTAACATGGTCATGTGACCTTGCATGTACAGGATTTGTTTTATAGGTTGTACAACTTTGTCCTTGAGTTCTAAAAAGCTATGAACATGGTTATTGGCATTATAATATCAAGTAAAAAGTGGATCTTCAGCCGCTAAAATTTATTTCAGGTTGTGAACGAAACGATTCCTGCACTTCAAAAGCTGAGGGAAGCTGGGAAGATTCGTTTCATTGGTATTACGGGACTTCCATTGGAAATTTTTACGTATGTGCTTGATCGAGTGCCACCTGGCTCCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACATTGTTAGATTTGCTACCTTACTTAAAGAGTAAGGAGATTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACTGATTATGGTCCCCCAGAATGGCACCCAGCTTCACCAGAATTGAAGGTACAGTTTCTCACCCCCCCCTTTCTTTCATTAGCTCCATAGTTGAATTGTGAAACTTAAAAGCTTATGCAGGGAAAGCACTTTCAGTTGACTGATGTCACGCAAAGGAAACACATTTGTTTGGGGGAGTACATTTCTCGTTCTTTACTCTTATGGCGTTTAGGTCCCATCGTGGAAACTTTATCTCTTGAAATGAAAATAATTTCTAGGTGTTGATTATAGTATGCAGTAATGACTAGTTCATTCAACCATACAAACTAACCCAAAACCATTTGTCCTAGTGCTGTGATTTTATCTTTTATTTTTTCGAACTGTGTTTTGTTTGAGCTTTGGCTTTACATTGGATTCTGATATTGTTCTCTAATTTAAATGGCTTCAGTCTGCATGCCAAGCTGCAGCTGCTCTTTGTAAAAAGAAAGGAAAACATATTTCAAAGTTAGCCCTCCAATACAGTCTGTCAAACAAAGATATTTCAACGGTTCTGGTTGGCATGAACTCTGTCAGACAGGTATCTTTCAATAATCACATTTATAGTATTCTTTGTCGATATTTCTTTCAATATCTTTCGAGTCCAATCTCCTTTTTCGAAGATCATGGCATGCCCCTATGCCATGGTGTATATACTCATTCTGTATCAATTAGTTGGTAATTTCCTGGTCCATGCTTGTACATGCCTACTTCGATGTTGAAAAAACTTGCCTCGACACCAGTGAGGAGGAAGTCCTTGTTTTCCGACATTGTTTATCTTTCATGGATAAAAAAAGTCAACCAGATTACTTTTTTATTCAACGAAAATATACCGATACAAGCAGACCACACAAGGTGGAGGGATAGGCAAAAAGATAACTTTTGTATGGAAGGAATTGGGACAGCAGAGAGCAAGTTAAATGAACTTCTTTTTGATGGATGGATAGTTCCTAAAAGATCATGAGGCTTTTTGAATTGACTTTGGATTTATGATCCTTTTTGGTTGGATATAAAATTTAATTAGAAAGAATAGTTTAAGAGGGATCGTCCCGCACCAAGACGTCAAAGGAGATTTTATGATGACAGTCCGTATCCTCTCTTATTGGCTTTGATCAAGATTATAGCAGAATTGCATAAATGGTTAGCAAGAGAGGACCAAGGAGAAAAAATGTTGGAGTTTCATGTTGCTAGTTTGAATACTAATAGTACGAGAAGCTAGTTTTTCGAAGTATAATTTTCATCCTATATTGCTACCTAGAATGTTAAAATCCTATGACCAATTGTTGAGGATTAATTGAGGATTATTGGGAGTGAGTCCCATGTTGGTTAATGTAGTGGAGGATCATGGGTTTATAAGTGAGGAATATTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACATGGTATCAGAGCCATACCCTAAACTTAGCTATGACAATAGAATCCTCAAATATCGAACAAAGATTGTGAGTCTCGAAAGTGAAGTAAAAAAATGATTGAAGTGTCAAACAAAAGGTGTACTTTGTTCGAGGGCTCCAGAGAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTTCGAGAGCTCCATAAGCCTCAGAGAGGCTTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGAGGATTATTGGGAGTGAGTCCCACATTGGTTAATTTAGTGGAGGATCATAGGTTTATAGGTTTATAAGTGAGGAATATTATCTCCATTGGTACGAGGCCTTTTGGGGAAGCCCAAAGCAAATCCACGAGAGCTTATACTCAAAGTGGATAATATCATACCATTGTGGAGAGTCGTGAATATTTATTCTCATACAATGTTAGTGTCCAAACGAGCTCCTGATTGGGCTCGTTGGATTTAAGCCCTAAAAATCAATCTCAATGAGCTGACATATAGTGTTTGTTCATAGTTTCTTCGTGACCATGCAAACTTCTTCAAAGATTGCATCATAGAATCTTAACCAAGTTGTAAAAATTTTGAAACAGGTGGAGGAAAACGTAGCTGCAGCTGAAGAACTTGCCACATTTGGGAGGGATGAGGAAACTCTATCTGAGGTTGAAGCTATCCTTCACCCTGTCAAGAATCAGACATGGCCAAGTGGAATCCAACAGAGCTGACTGCTGGTATGTCTAATTTCTTTTTAATGCTGAATGTTGAATAAAAATGAAAGAACATGCGAACAACTATCATGTATAACATGTTATGGATGTAAGGCTATCGATGCTCCAACTTTTAAATGTTCTATCAACATGTTCTTATGAATGTATATCAACTGCTATCTTTAACCTGATTCCCATTCTCTTCTGTAGCATTTTTGATAAGACTGTAGTCGTTTTACGACTGGGATGCAGTTGTCCTTTGATCCTATCTCTCCCGAATTGGAGTTTTGTTTTATGTTTTAACTGAATAAATGATTTATGAACTAATT TAGCGGCTACAGCAGTGCCTCATCTGCGACCCGATCCCTCAACTTGGCGTTTATCTTCCAAAATCGGAATCCCCTTTGTCACTTCCTTTCCTGGGAAGATCGTACTCTGTTCCCAATTCTGAGAGCTTCATCGGAATCAATGGCGGCTTCTTATCCCAAGCTCCAGCTTCGGAAGCTGGGAAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGTGCCTCGCCTCTCGGCAGCGTCTTCGGCCCTGTTTCTGAGGAGGATGCCGTCGCCTCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCTCCGTACTATGGAGGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTAAAAGCTCTAGATGTTCCAAGGAGTGAATATATAGTGTCAACAAAGTGTGGGAGATATGCTGAGGGTTTTGATTTCAGTGCTGAGAGGGTAACAAGGAGCATTGATGAGAGTTTGGCTAGGCTACAACTAGATTATGTCGATATACTGCATTGCCATGATATCGAATTTGGATCTCTTGATCAGGTTGTGAACGAAACGATTCCTGCACTTCAAAAGCTGAGGGAAGCTGGGAAGATTCGTTTCATTGGTATTACGGGACTTCCATTGGAAATTTTTACGTATGTGCTTGATCGAGTGCCACCTGGCTCCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACATTGTTAGATTTGCTACCTTACTTAAAGAGTAAGGAGATTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACTGATTATGGTCCCCCAGAATGGCACCCAGCTTCACCAGAATTGAAGTCTGCATGCCAAGCTGCAGCTGCTCTTTGTAAAAAGAAAGGAAAACATATTTCAAAGTTAGCCCTCCAATACAGTCTGTCAAACAAAGATATTTCAACGGTTCTGGTTGGCATGAACTCTGTCAGACAGGTGGAGGAAAACGTAGCTGCAGCTGAAGAACTTGCCACATTTGGGAGGGATGAGGAAACTCTATCTGAGGTTGAAGCTATCCTTCACCCTGTCAAGAATCAGACATGGCCAAGTGGAATCCAACAGAGCTGACTGCTGGTATGTCTAATTTCTTTTTAATGCTGAATGTTGAATAAAAATGAAAGAACATGCGAACAACTATCATGTATAACATGTTATGGATGTAAGGCTATCGATGCTCCAACTTTTAAATGTTCTATCAACATGTTCTTATGAATGTATATCAACTGCTATCTTTAACCTGATTCCCATTCTCTTCTGTAGCATTTTTGATAAGACTGTAGTCGTTTTACGACTGGGATGCAGTTGTCCTTTGATCCTATCTCTCCCGAATTGGAGTTTTGTTTTATGTTTTAACTGAATAAATGATTTATGAACTAATT ATGGCGGCTTCTTATCCCAAGCTCCAGCTTCGGAAGCTGGGAAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGTGCCTCGCCTCTCGGCAGCGTCTTCGGCCCTGTTTCTGAGGAGGATGCCGTCGCCTCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCTCCGTACTATGGAGGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTAAAAGCTCTAGATGTTCCAAGGAGTGAATATATAGTGTCAACAAAGTGTGGGAGATATGCTGAGGGTTTTGATTTCAGTGCTGAGAGGGTAACAAGGAGCATTGATGAGAGTTTGGCTAGGCTACAACTAGATTATGTCGATATACTGCATTGCCATGATATCGAATTTGGATCTCTTGATCAGGTTGTGAACGAAACGATTCCTGCACTTCAAAAGCTGAGGGAAGCTGGGAAGATTCGTTTCATTGGTATTACGGGACTTCCATTGGAAATTTTTACGTATGTGCTTGATCGAGTGCCACCTGGCTCCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACATTGTTAGATTTGCTACCTTACTTAAAGAGTAAGGAGATTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACTGATTATGGTCCCCCAGAATGGCACCCAGCTTCACCAGAATTGAAGTCTGCATGCCAAGCTGCAGCTGCTCTTTGTAAAAAGAAAGGAAAACATATTTCAAAGTTAGCCCTCCAATACAGTCTGTCAAACAAAGATATTTCAACGGTTCTGGTTGGCATGAACTCTGTCAGACAGGTGGAGGAAAACGTAGCTGCAGCTGAAGAACTTGCCACATTTGGGAGGGATGAGGAAACTCTATCTGAGGTTGAAGCTATCCTTCACCCTGTCAAGAATCAGACATGGCCAAGTGGAATCCAACAGAGCTGA MAASYPKLQLRKLGNTGLKTSSVGFGASPLGSVFGPVSEEDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKGLKALDVPRSEYIVSTKCGRYAEGFDFSAERVTRSIDESLARLQLDYVDILHCHDIEFGSLDQVVNETIPALQKLREAGKIRFIGITGLPLEIFTYVLDRVPPGSIDVILSYCHYSINDSTLLDLLPYLKSKEIGIISASPLAMGLLTDYGPPEWHPASPELKSACQAAAALCKKKGKHISKLALQYSLSNKDISTVLVGMNSVRQVEENVAAAEELATFGRDEETLSEVEAILHPVKNQTWPSGIQQS
BLAST of Cp4.1LG15g04160 vs. Swiss-Prot
Match: GALDH_ARATH (L-galactose dehydrogenase OS=Arabidopsis thaliana GN=LGALDH PE=1 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 2.5e-151 Identity = 263/317 (82.97%), Postives = 292/317 (92.11%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. Swiss-Prot
Match: ARA2_YEAST (D-arabinose 1-dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARA2 PE=1 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.4e-29 Identity = 90/292 (30.82%), Postives = 157/292 (53.77%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. Swiss-Prot
Match: FCDH_PSESP (D-threo-aldose 1-dehydrogenase OS=Pseudomonas sp. GN=fdh PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.8e-28 Identity = 90/302 (29.80%), Postives = 146/302 (48.34%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. Swiss-Prot
Match: AKR1_SOYBN (Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.9e-24 Identity = 83/301 (27.57%), Postives = 143/301 (47.51%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase YqkF OS=Bacillus subtilis (strain 168) GN=yqkF PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.8e-23 Identity = 83/298 (27.85%), Postives = 154/298 (51.68%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. TrEMBL
Match: E5GCR2_CUCME (L-galactose dehydrogenase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 590.1 bits (1520), Expect = 1.6e-165 Identity = 296/323 (91.64%), Postives = 309/323 (95.67%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. TrEMBL
Match: A0A0A0K290_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067450 PE=4 SV=1) HSP 1 Score: 587.8 bits (1514), Expect = 8.0e-165 Identity = 297/323 (91.95%), Postives = 307/323 (95.05%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. TrEMBL
Match: B9HN60_POPTR (L-galactose dehydrogenase family protein OS=Populus trichocarpa GN=POPTR_0009s08490g PE=4 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 1.5e-158 Identity = 280/323 (86.69%), Postives = 305/323 (94.43%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. TrEMBL
Match: A0A061DX80_THECC (NAD(P)-linked oxidoreductase superfamily protein OS=Theobroma cacao GN=TCM_006358 PE=4 SV=1) HSP 1 Score: 565.8 bits (1457), Expect = 3.3e-158 Identity = 281/318 (88.36%), Postives = 303/318 (95.28%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. TrEMBL
Match: A0A0B0NLB1_GOSAR (D-arabinose 1-dehydrogenase OS=Gossypium arboreum GN=F383_18998 PE=4 SV=1) HSP 1 Score: 565.8 bits (1457), Expect = 3.3e-158 Identity = 283/318 (88.99%), Postives = 299/318 (94.03%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. TAIR10
Match: AT4G33670.1 (AT4G33670.1 NAD(P)-linked oxidoreductase superfamily protein) HSP 1 Score: 536.2 bits (1380), Expect = 1.4e-152 Identity = 263/317 (82.97%), Postives = 292/317 (92.11%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. TAIR10
Match: AT1G04690.1 (AT1G04690.1 potassium channel beta subunit 1) HSP 1 Score: 83.2 bits (204), Expect = 3.3e-16 Identity = 64/227 (28.19%), Postives = 107/227 (47.14%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. NCBI nr
Match: gi|659110219|ref|XP_008455112.1| (PREDICTED: L-galactose dehydrogenase [Cucumis melo]) HSP 1 Score: 590.1 bits (1520), Expect = 2.3e-165 Identity = 296/323 (91.64%), Postives = 309/323 (95.67%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. NCBI nr
Match: gi|778724639|ref|XP_004136903.2| (PREDICTED: L-galactose dehydrogenase [Cucumis sativus]) HSP 1 Score: 587.8 bits (1514), Expect = 1.2e-164 Identity = 297/323 (91.95%), Postives = 307/323 (95.05%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. NCBI nr
Match: gi|224103819|ref|XP_002313206.1| (L-galactose dehydrogenase family protein [Populus trichocarpa]) HSP 1 Score: 567.0 bits (1460), Expect = 2.1e-158 Identity = 280/323 (86.69%), Postives = 305/323 (94.43%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. NCBI nr
Match: gi|743795568|ref|XP_011002821.1| (PREDICTED: L-galactose dehydrogenase-like [Populus euphratica]) HSP 1 Score: 565.8 bits (1457), Expect = 4.7e-158 Identity = 280/323 (86.69%), Postives = 304/323 (94.12%), Query Frame = 1
BLAST of Cp4.1LG15g04160 vs. NCBI nr
Match: gi|590682881|ref|XP_007041459.1| (NAD(P)-linked oxidoreductase superfamily protein [Theobroma cacao]) HSP 1 Score: 565.8 bits (1457), Expect = 4.7e-158 Identity = 281/318 (88.36%), Postives = 303/318 (95.28%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|