CmoCh19G005250 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAGAAAAGTCTCAAATGGTAAAATTAAAATTTGATTTAGTAAATGTCTAAAATGCCCTTTTGGAAACGAATTTGTTTAATTGTCCTAGCGGCTATACAGCAGTGCCTCATCTGGAACCCGGTCCCTCAACTTGGCGTTTTTCTTCCAAAATCGGAATCCCCTTTGTCACTTCCTTTCCCGGGAAGATCGTACTCTGTTCCCAATTCTGAGAGCTTCATCGGAATCAATGGCGGCTTCTTATCCCAAGCTCCAGCTTCGGAAGCTGGGGAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGTGCCTCGCCTCTCGGCAGCGTCTTCGGCCCTGTTTCTGAGGAGGATGCCGTCGCCTCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCTCCGTATGGAATTCGTAACTGTTGTTTTCCTATTTACTTAGTGAGAGAGGCTTTCTTATGAAATTGACGAGTTTCTACATCAAACAATAGAGCTAGAGTTTGAGAATTTGTTCAATGCTTGGTCTTGCATGTTCATTTGTTTGGACTTGACTTTGTGCATGCTTGATTTTCGTTGAAATTTGTTGGCTCGATTTGGCTCTAGGAAGTTCTGTGTTGCTTTTTTGTTGAGATTTGTTTAGGTAAATGTAAGTTGTAACGAAGATTTGAAATATTGCTACGTGTATCCAGGTTTGATGTCTGATTTGATGTTATTGAAAGTTTAGATATGGAAGAGCCAATGGCTTTCGGAAAATATAAATCATTCCATTTTTTATATGTTTAGTTCATCGGTAAGGATATGTAAGGGCTAGTTTGGTTATCTTCTATGTGATTTCTGGCTCTAGCACTGAATTTGGGTTTGCCTCTTCGACGACATGCGTGAAGGTACTATGGAGGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTAAAAGCTCTAGATGTTCCGAGGAGTGAATATATAGTGTCAACAAAGTGTGGTAGATATGCTGAGGGTTTTGATTTCAGTGCTGAGAGGGTGACAAGGAGCATTGATGAGAGTTTGGCTAGGCTACAACTAGATTATGTCGATATACTGCATTGCCATGATATCGAATTTGGATCTCTTGATCAGGTTTGTTACTTTTCTTAAGAACTCATTGACCATTGAATTTTAGTTATTAACATGGTCATGTGACCTTGCATGGACAGGATTTGTCTTATAGGTTGTACAACTTTGTCCTTGAGTTCTAAAAAGCTATGAACATGGTTATTGGCATTATAATATCAAGTAAAAAGTGGATCTTCAGCCGCTAAAATTTATTTCAGGTTGTGAACGAAACGATTCCTGCACTTCAAAAGCTGAGGGAAGCTGGGAAGATTCGTTTCATTGGTATTACGGGACTTCCATTGGAAATTTTTACGTATGTGCTTGATCGAGTGCCACCTGGCTCCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACATTGTTAGATTTGCTACCTTACTTAAAGAGTAAGGAGATTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACTGATTATGGTCCCCCAGAATGGCACCCAGCTTCACCAGAATTGAAGGTACAGTTTCTCACCCCCCCCCCTTCCTTTCATTAGCTCCATAGTTGAATTGTGAAACTTAAAAGCTTATGCAGGGAAAGCACTTTCAGTTGACTGATGTCATGCAAAGAAAACACGTTTGTTTGGAGGAGTACATTTCTCGTTCTTTACTCTTATGGCGTTTAGGTCCCATCGTGGAAACTTTATCTCTTGAAATGAAAATAATTTCTAGGTGTTGATTATAGTATGCAGTAATGACTAGTTCATTCAACCATACAAACTAACCCAAAACCATTTGTTCTAGTGCTGTGATTTTATCTTTTATTTTTTCGAACTGTGTTTTGTTTGAGCTTTGGCTTTACATTGGATTCTGATATTGTTCTCTAATTTAAATGGCTTCAGTCTGCATGCCAAGCTGCAGCTGCTCATTGTAAAAAGAAAGGAAAACATATTTCAAAGTTAGCCCTCCAATACAGTCTGTCAAACAAAGATATTTCAACGGTTCTGGTTGGCATGAACTCTGTCAGACAGGTATCTTTCAATAATCACATTTATAGTATTCTTTGTCGATATTTCTTTCAATATCTTTCGAGTCCAATCTCCTTTTTCGAAGATCATGGCATGCCCCTATGCCATGGTGTATATACTCATTCTGTATCAATTAGTTGGTAATTTCCTGGTCCATGCTTGTACTACTCCTACTTCGTTGTTGAAAAAACTTGCCTCCACACCAATGAGGAGGAAGTTCTTGTTTTCCGACATTGTTTATCTTTCATGGATAAAAAAAGTCAACCAGATTACTTCTTTATTCAACGAAAATATACCGATACAAGCAGACCACACAAGGTGGAGGGATAGGCAAAAAGAGAACTTTTGTATGGAAGGAATTGGGACAGCAGAGAGCAAGTTAAATGAACTTCTTTTTGATGGATGGATAGTTCCTAAAAGGTCATTAGACTATTCACCTTTAGATTTATGAACTGGTTCCTTCTTTTTGGTTGGAAATAAAAATTTAATTATATAGAATAATTTTAGAGGGATCATCCCACACCATGACGTCAAAGGAGATTGATGACAGTCTGCATCCACTCTTGTTGGCTTTGATCAAGATTATAGCAGAATTGCAAAAATGGTTAGCAAGAGAGGACCAAGGAGAAAGAATGTTGGAGTTTCGTGTTGCTAGTTTGAATACTAAGTACGAGAAGCTAGTTTTTCGAAGTATAATTTTCATCCTATATTGCTACCTAGAATGTTAAAATCCTATGAGTTGACCAAATTGTTGAGGATTATTGGGAGTTGACCAAATTGTTGAGGATTATTGGGAGTGAGTCCCACGTTGGTTAATTTAGTGGAAGATCGTGGGTTTATAAGTGAGGAATATTATCTTCATTAGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTTCTAACATGGTATCAGAGCCATGCCCTAAACTTAGCCATGACAATAGAATCCTCAAATATCGAACAAAGATTGTGAGCCTCTAAAGTGAAGTCAAAAAGTGACTAAAGTGTCGAACAAAAGGTGTACTTTGTTCGAGGGCTCCAAAGAAAGGAGTCGAGCCTCGATTAAGGAGAGGTTGTTCGAGAGCTCCATAAGCCTCAAGAGAGGCTTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGAGGATTATTGGGAATGAGTCCCGCATTGGAGGATTGTTGAGGATTATTGGGAATGAGTCTCGCATTGGAGGATTGTTGAGGATTATTGGGAATGAGTCCCGCATTGGAGGATTGTTGAGGATTATTGGGAATGAGTCTCGCATTGGAGGATTGTTGAGGATTATTGGGAATGAGTCCCGCATTGGTTAATTTAATGGAGGATCATAGGTTTATAAGTGAGGAATATTATCTCCATTGGTATGAGACCTTTTGGGGAAGCCCAAAGCAAATCCATGAGAGCTTATGCTCAAAGTGGATAATATCATACCATTGTGGAGAGTCGTGAATATTTATTCTCATACAATGTTGAGCTCCCTTGGATTTAAGCCCTAAAAATCAATCTCGATGAGCTGACATATAGCGTTTGTTCATATTTTCTTCGTGACCATGCTGCAAACTTCTTCAAAGATTGCATCATAGAATCTTAACCAAGTTGTAAAAATTTTGGAACAGGTGGAGGAAAACGTAGCTGCAGCTGAAGAACTTGCCACCTTTGGTAGGGATGAGGAAACTCTATCTGAGGTTGAAGCTATCCTTCACCCTGTCAAGAATCAGACATGGCCAAGTGGAATCCAACAGAGCTGACTGCTGGTATGTCTAATTTCTTTTTAATGTTGAATGTTGAATAAAAATGAAAGAACATGCGAACAACTATCATGTATAACATGTTGATGGATGTAGGTTATCGATGCTCCAACTTTAAAATGTTCTATCAACATGTTATGAATGTATATCAACTGCTATCTTTAACCCGATTCCCATTCTCTTCTGTAGCATTTTAGATAAGACTAGTCGTTTTACGACTGGGATGTAGTTGTCCTTTGATCCTATCTCTCCCGAATTGGAGTTTTGTTTTATGTTTTAACTGAATAAATGATTTATGAACTAAATTCTCG ATGCGGCTATACAGCAGTGCCTCATCTGGAACCCGGTCCCTCAACTTGGCGTTTTTCTTCCAAAATCGGAATCCCCTTTGTCACTTCCTTTCCCGGGAAGATCGTACTCTGTTCCCAATTCTGAGAGCTTCATCGGAATCAATGGCGGCTTCTTATCCCAAGCTCCAGCTTCGGAAGCTGGGGAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGTGCCTCGCCTCTCGGCAGCGTCTTCGGCCCTGTTTCTGAGGAGGATGCCGTCGCCTCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCTCCGTACTATGGAGGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTAAAAGCTCTAGATGTTCCGAGGAGTGAATATATAGTGTCAACAAAGTGTGGTAGATATGCTGAGGGTTTTGATTTCAGTGCTGAGAGGGTGACAAGGAGCATTGATGAGAGTTTGGCTAGGCTACAACTAGATTATGTCGATATACTGCATTGCCATGATATCGAATTTGGATCTCTTGATCAGGTTGTGAACGAAACGATTCCTGCACTTCAAAAGCTGAGGGAAGCTGGGAAGATTCGTTTCATTGGTATTACGGGACTTCCATTGGAAATTTTTACGTATGTGCTTGATCGAGTGCCACCTGGCTCCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACATTGTTAGATTTGCTACCTTACTTAAAGAGTAAGGAGATTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACTGATTATGGTCCCCCAGAATGGCACCCAGCTTCACCAGAATTGAAGTCTGCATGCCAAGCTGCAGCTGCTCATTGTAAAAAGAAAGGAAAACATATTTCAAAGTTAGCCCTCCAATACAGTCTGTCAAACAAAGATATTTCAACGGTTCTGGTTGGCATGAACTCTGTCAGACAGGTGGAGGAAAACGTAGCTGCAGCTGAAGAACTTGCCACCTTTGGTAGGGATGAGGAAACTCTATCTGAGGTTGAAGCTATCCTTCACCCTGTCAAGAATCAGACATGGCCAAGTGGAATCCAACAGAGCTGACTGCTGGTATGTCTAATTTCTTTTTAATGTTGAATGTTGAATAAAAATGAAAGAACATGCGAACAACTATCATGTATAACATGTTGATGGATGTAGGTTATCGATGCTCCAACTTTAAAATGTTCTATCAACATGTTATGAATGTATATCAACTGCTATCTTTAACCCGATTCCCATTCTCTTCTGTAGCATTTTAGATAAGACTAGTCGTTTTACGACTGGGATGTAGTTGTCCTTTGATCCTATCTCTCCCGAATTGGAGTTTTGTTTTATGTTTTAACTGAATAAATGATTTATGAACTAAATTCTCG ATGCGGCTATACAGCAGTGCCTCATCTGGAACCCGGTCCCTCAACTTGGCGTTTTTCTTCCAAAATCGGAATCCCCTTTGTCACTTCCTTTCCCGGGAAGATCGTACTCTGTTCCCAATTCTGAGAGCTTCATCGGAATCAATGGCGGCTTCTTATCCCAAGCTCCAGCTTCGGAAGCTGGGGAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGTGCCTCGCCTCTCGGCAGCGTCTTCGGCCCTGTTTCTGAGGAGGATGCCGTCGCCTCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCTCCGTACTATGGAGGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTAAAAGCTCTAGATGTTCCGAGGAGTGAATATATAGTGTCAACAAAGTGTGGTAGATATGCTGAGGGTTTTGATTTCAGTGCTGAGAGGGTGACAAGGAGCATTGATGAGAGTTTGGCTAGGCTACAACTAGATTATGTCGATATACTGCATTGCCATGATATCGAATTTGGATCTCTTGATCAGGTTGTGAACGAAACGATTCCTGCACTTCAAAAGCTGAGGGAAGCTGGGAAGATTCGTTTCATTGGTATTACGGGACTTCCATTGGAAATTTTTACGTATGTGCTTGATCGAGTGCCACCTGGCTCCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACATTGTTAGATTTGCTACCTTACTTAAAGAGTAAGGAGATTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACTGATTATGGTCCCCCAGAATGGCACCCAGCTTCACCAGAATTGAAGTCTGCATGCCAAGCTGCAGCTGCTCATTGTAAAAAGAAAGGAAAACATATTTCAAAGTTAGCCCTCCAATACAGTCTGTCAAACAAAGATATTTCAACGGTTCTGGTTGGCATGAACTCTGTCAGACAGGTGGAGGAAAACGTAGCTGCAGCTGAAGAACTTGCCACCTTTGGTAGGGATGAGGAAACTCTATCTGAGGTTGAAGCTATCCTTCACCCTGTCAAGAATCAGACATGGCCAAGTGGAATCCAACAGAGCTGA
BLAST of CmoCh19G005250 vs. Swiss-Prot
Match: GALDH_ARATH (L-galactose dehydrogenase OS=Arabidopsis thaliana GN=LGALDH PE=1 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 2.0e-152 Identity = 264/317 (83.28%), Postives = 293/317 (92.43%), Query Frame = 1
BLAST of CmoCh19G005250 vs. Swiss-Prot
Match: ARA2_YEAST (D-arabinose 1-dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARA2 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 9.5e-30 Identity = 90/292 (30.82%), Postives = 158/292 (54.11%), Query Frame = 1
BLAST of CmoCh19G005250 vs. Swiss-Prot
Match: FCDH_PSESP (D-threo-aldose 1-dehydrogenase OS=Pseudomonas sp. GN=fdh PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.4e-27 Identity = 90/302 (29.80%), Postives = 145/302 (48.01%), Query Frame = 1
BLAST of CmoCh19G005250 vs. Swiss-Prot
Match: AKR1_SOYBN (Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.9e-23 Identity = 82/301 (27.24%), Postives = 143/301 (47.51%), Query Frame = 1
BLAST of CmoCh19G005250 vs. Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase YqkF OS=Bacillus subtilis (strain 168) GN=yqkF PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.6e-23 Identity = 84/299 (28.09%), Postives = 155/299 (51.84%), Query Frame = 1
BLAST of CmoCh19G005250 vs. TrEMBL
Match: E5GCR2_CUCME (L-galactose dehydrogenase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 594.0 bits (1530), Expect = 1.3e-166 Identity = 297/323 (91.95%), Postives = 310/323 (95.98%), Query Frame = 1
BLAST of CmoCh19G005250 vs. TrEMBL
Match: A0A0A0K290_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067450 PE=4 SV=1) HSP 1 Score: 591.7 bits (1524), Expect = 6.4e-166 Identity = 298/323 (92.26%), Postives = 308/323 (95.36%), Query Frame = 1
BLAST of CmoCh19G005250 vs. TrEMBL
Match: A0A061DX80_THECC (NAD(P)-linked oxidoreductase superfamily protein OS=Theobroma cacao GN=TCM_006358 PE=4 SV=1) HSP 1 Score: 570.9 bits (1470), Expect = 1.2e-159 Identity = 286/333 (85.89%), Postives = 312/333 (93.69%), Query Frame = 1
BLAST of CmoCh19G005250 vs. TrEMBL
Match: A0A0B0NLB1_GOSAR (D-arabinose 1-dehydrogenase OS=Gossypium arboreum GN=F383_18998 PE=4 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 2.2e-158 Identity = 283/318 (88.99%), Postives = 300/318 (94.34%), Query Frame = 1
BLAST of CmoCh19G005250 vs. TrEMBL
Match: B9HN60_POPTR (L-galactose dehydrogenase family protein OS=Populus trichocarpa GN=POPTR_0009s08490g PE=4 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 2.9e-158 Identity = 280/323 (86.69%), Postives = 305/323 (94.43%), Query Frame = 1
BLAST of CmoCh19G005250 vs. TAIR10
Match: AT4G33670.1 (AT4G33670.1 NAD(P)-linked oxidoreductase superfamily protein) HSP 1 Score: 540.0 bits (1390), Expect = 1.1e-153 Identity = 264/317 (83.28%), Postives = 293/317 (92.43%), Query Frame = 1
BLAST of CmoCh19G005250 vs. TAIR10
Match: AT1G04690.1 (AT1G04690.1 potassium channel beta subunit 1) HSP 1 Score: 82.8 bits (203), Expect = 4.9e-16 Identity = 64/227 (28.19%), Postives = 107/227 (47.14%), Query Frame = 1
BLAST of CmoCh19G005250 vs. NCBI nr
Match: gi|659110219|ref|XP_008455112.1| (PREDICTED: L-galactose dehydrogenase [Cucumis melo]) HSP 1 Score: 594.0 bits (1530), Expect = 1.8e-166 Identity = 297/323 (91.95%), Postives = 310/323 (95.98%), Query Frame = 1
BLAST of CmoCh19G005250 vs. NCBI nr
Match: gi|778724639|ref|XP_004136903.2| (PREDICTED: L-galactose dehydrogenase [Cucumis sativus]) HSP 1 Score: 591.7 bits (1524), Expect = 9.1e-166 Identity = 298/323 (92.26%), Postives = 308/323 (95.36%), Query Frame = 1
BLAST of CmoCh19G005250 vs. NCBI nr
Match: gi|590682881|ref|XP_007041459.1| (NAD(P)-linked oxidoreductase superfamily protein [Theobroma cacao]) HSP 1 Score: 570.9 bits (1470), Expect = 1.7e-159 Identity = 286/333 (85.89%), Postives = 312/333 (93.69%), Query Frame = 1
BLAST of CmoCh19G005250 vs. NCBI nr
Match: gi|728833166|gb|KHG12609.1| (D-arabinose 1-dehydrogenase [Gossypium arboreum]) HSP 1 Score: 566.6 bits (1459), Expect = 3.2e-158 Identity = 283/318 (88.99%), Postives = 300/318 (94.34%), Query Frame = 1
BLAST of CmoCh19G005250 vs. NCBI nr
Match: gi|255554531|ref|XP_002518304.1| (PREDICTED: L-galactose dehydrogenase [Ricinus communis]) HSP 1 Score: 566.2 bits (1458), Expect = 4.1e-158 Identity = 280/323 (86.69%), Postives = 303/323 (93.81%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |