Cp4.1LG15g03820 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g03820
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	GATA transcription factor, putative
Location	Cp4.1LG15 : 5041268 .. 5047572 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATCTGCAACTAAGATCAAGATGAAGCAACCCTTTGTTGCAGCACCTTCTTCCCCATTTCTGCTTTTCGTCGTCTCGCCGGCGCTGTTTCGCCGCCGGTTTTTCTATCGTTCCGGCGACCTTGAACTGAAGTGGAGTGGAGTGGAGTGGCATCAACCGTAAAAAACCCCCAAATTCAAGGTCATTTTCCAGCCCATGTTATCTTCCTCCTTTTTCCCTATGAAAATTTAGATTCCCAATTTTCCATATCAATCTTCGATTATCCTCTTCCTGCTGCTGATTTTTTTTGTCCAACGCTTTTCACTTTCACTCTGCTTTCTTCTTCACCCTTCTGATATTTACTTGGATTTTCTAGGGTTTACTTTACTTGAATTTTTTGTTGCATTTTTCGCGATTGAATTTGGATTTGGAATCGCTTGCTTTTACTTCAATTCCAGTTTCTTTTGTGTTATTGGGCGGGGTTGATTAATTCCCCTCTCTTTTTGTTGAGCTATCCTGTTCGAAATTTGAAATCCAGGGCTTTGAATTGTCTGTTTCTCATACATAATTTTTCTGCTGACCTTTTCGATCGTCCGTCGTGTTTGGTCAATAAGTTTCTGGAATTTTTTGGTTCCTTGTTAAATTAGCGTGTTCTTGGCCTTCCTATGTAATTCTTGAAGAAATGCCGGACTCCAATTTCCAAGACGCGATGTACGGTTCCGCCGTCGTGAACAACGGTGGCCGGGTTTTGGATAGCATCCAGAACCGAGTTGGCGATGAAGGTGACGACATTACTGTCGGGGAAGAGTCCATGGACAATCCTCAGATGCGCTTCGAAGATTCTGGGGGGATGAACCGAGTCCAGGACATTGTTCCTTCGTCGTATGTTTCCGGCTCCGATTACAACCCTTTGACTGGAAACGGTGGTGCTGACCAACTTACACTGTCGTTCCGCGGGGAGGTTTACGCTTTTGACTCTGTATCGCCGGACAAGGTTTGGTTTTCAATTGGGTGTCCATACTCTTCGTAAATTATGCACTAGTTGTGTAATTCTTCTTCTACTTACTGAAGATATATTGTATTTGAAGCTGGGTTTGAGTAATTTGCGAACAATATGATGAACTTCGAACAATTTGACTCAATGCTTCGTTATGACATTCAACTTCAAGATCATTCAAATTGGGGAGGGATTTTGTAAAATGTAATATTGTTGGTTTAAAGGATTTTCTGAACTGTTATAGAATGGGTATAATTTTAAAACCCTGTTTTAGTTTCCTACAGGGACCTAACTGTGTTGTGTTGCTGTATTGTTGGAAATTTGGACGATGAATGGAAAGCTTTTTCTTTTGAAATATGATTGAAAAAGAAGAAAGGAATATGATGATAAATGAACAGATTGTGCCAGTTGAACTGAATACTACTGTTGTCAAATTAGATGTATGAAGGTTTTGGTGCGAAGTATACATATATGCCATGGCATGCCATACTATATGAAGGAGTTGTTTTGAGGTTCGAGTACATGAATACGATCACGATAGATTTAGGAAGGATTTGGTGCGAAGTATACGTATATGCCATGCCATGCCATGCCATACTATTATGAAGGAGTTGTTTTGAGGTTTGAGTACATGAATTCGAACACGAGGGGTTTTAAGTTTTTCGTGGTTAAATTTGACAGGTTCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGGATTCCTGCTGTTGGAAGCGTTCCCGTCAACCAACAGGTATACGTGCACGTTATTATTTTAATGGTGTATTGATTGAAACCATCTGGTGTTCTTGATTTCCTACCTCAGTTAACTTTTGTTCTAATTCTTACAGGGTACCAATGGCTTTCCTGTCAGGTCGGTTCAACCACAAAGAGCTGCTTCATTGAATAGGTTTAGGGAGAAGAGAAAAGAAAGGTGTTTTGAGAAGAAAATTCGTTACACCGTGCGAAAAGAAGTTGCACTCAGGTATAACTTACAATAGATGCCTGTTTATTTATTTATTAGATGGTTGAAGTTAAGTCAAGGGAGCGCTCCCTTCCTCTCCCGCTCTCACTCAGAGATCTAAGTAAAAAATTACCAAAAAGATATCCGATGAGATCCCACATCAATTGGGGAGGAGAACGAAACATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAATCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGCTGTTACATATCCTTTGCCAGACTCTCTCCTCTCTATATTCCCTCTTTGTCAGCCTTACTGACTAATACGCTTGAGTCGTGCACAAACTATGACATCATCCTACATGTCTCACCCTTTCCTCGTTTACCAGCATACACTTCAGTGATTGGGGCCTATCATTATATTAAGTAGAGTCAACAATTAGAAAACAGCAGGGATAGGATAGTGTGAAACAGCTATATTATGATTTTGTGGATCGTCTCTGATCTTGGTTGTGGTCAAATGGGATTTTCTAAAACATTAGTTTTTGAGGCAGGTAGCATTTCAATTTTAGATTTTCAGATGAGAAAAGGTGAAGGAAGTTTCTTGTAACAGCCCAATCCCACCGCTAACAGATATTGTCATTTTTGAGCTTTCCCTTCTGGCTTCCCCCTCAAAGTTTTAAAACGCATCTGTTAGGGAAAAATTTCTACACTCTTGTAAAGAGAGCTTTGTTCCCCTCTCCAACCATTGTAGGATCTCACAATCCACTCTCTTTGGGGGCCCAACGTTCATCGTTGGCACACCGCCCGATAACCAACTTCGTGAGACTGACGGTAATACGTAATGGGCCAAAGCGGACAATATCTGTTAGCGATGTGCTTGGGTTGTTACATTTCTAACGTGGGAAAAATGCTTTATTGATGTAACTTAGAGGTGTTATAGATGTTCGATGGGCCGCTCATAATATTTAAGTTTTTTTTTACTTGAAATAAAGAAAATAAGAGCTGCTAATAGAAAGGAAATTACATATCTGAAGAAGATGGAAGTTGATAGGAATAACTTTCTTTAATCTTGTGAAATATATATATTTCTAATAACTTTCAGAAAAAGAGAGATGAATTTATAACTGTGATGATATAGTGCAAAAAGCATATCTTTAGTGTACTTCGAAAGATTTCTTTTAATCAATTCAATGTTGTTTCTGTTGTATGCAATTCAACGTGATATATTCGTCTCCTTCATCATCCAGAGTATATAAACTAAGTTACTTTATTGCATTATTCCATTCTTATGGTTTGTAGTGCTCAGCATGTGACAATTCAAGAATTTAAACTAGCTCTAGTCAAATGCTCAAATCATCAAAGGACAGAAAAAATCATTTTGTTCTCGAGACATGTTCTAACAACTCTTGTCTGGATTCATCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCTAATGCAGATGAAGTGGGCTCATCTTCACTTTTGTCTCAAACGTTGGATCCTGGACACGATGATGGCTTGTTGGAAACCTCGTAAGTATTGATCGATCCTCACAAGTCCCATTTTCTAACTTTGAATGACCTTGCTGGTAGTCTGAGTCTCATCAATTTGTCACCTTACGCTTGAGTTGCGAGTTGGTTTTGCATCCAACTGGAATACCAAAATTCTAGAAGGAATAGAAAAATTCTCAATTCTCATTCATACTGGAACAAATTCAGTGATCTGTTTCCCTAATAATGTCTTTCATTATTTGTTTATGCAGATGTACACATTGTGGAACCAGTTCAAAATCTACTCCGATGATGCGTCGTGGGCCTGCTGGCCCTAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCGAATAAGGTTTGTTAATCGAGTCCTTTAGGTGATATAACATCGTCCATGAAATCGAGTCCTTTAGGTGATATAACATCGTCCATGAAATCGAGTCCTTTACAGTTGTCTTGGGCTGAAACTTGCATAATTATTTGGAGATCAGTGATGGGAGCGAAGTATGTTGTGTTTAACATTTCATTATCAAAGACCTGCGGTTTTGATTCAGGAGATTCTTACAGTTGGTTGATGATGGTTTTAAGTTAGTTTTGCAGATCAGTCTTGGTTTTTAGATTTTCATTGGTTAGGAAGGAATACCAATAGGAACCGAACCTCGAGACGGTTTCTTCCTTTGCGAGTCTTTTCCCGTATGCCAGTAGAAAGACTTGGATGCAATCGGTTGCCTTAAATATTTAACTTTGTTCTTGACTATTGAGTTCCACCACACCACCTCTTGCCTTAAAATCTGCAGTAGAGAGTTTAGTTCATAGAGTATGTTTTTTCCCACAACTTTTCGAATGAGCTTTTCGATTGCGATTCACAGAGATGCATTAGCTGTTGTAGCAAACTAAATGTTCGACGACTTGTCAATGGCCTCGAGTTCTCATTAGTGAACTTTGAATGCAATAGGGAAACCTGCAGGAAATAGTTAAGTTCATAGAGTATGTCTGTTTTTTCCCACAACTTCTCAAATGAGCTTTTTGATTGCCATTCACCGAGATATATTACCTGTTGTAGCAAACTAAATGTTCGACGACTTGTCAATGGCCTCGAGTTCTCATTAGTGAACTTTGAATGCAATAGGGAAACCTGCAGTAAATGGTTAAGTTCATAGAGTATGTCTGTTTTTTCCCACAACTTTTCAAATGAGCTTTTCGATTGCCATTCACCGAGATATATTACCTGTCGTAGCAAACTAAATGTTCGACGACTTGTCAATGGCCTCGAGTTCTCATTAGTGAACTTTGAATGCAATAGGGAAACCTGCAGTAAATAGTTAAGTTCATAGAGTATGTCTGTTTTTTCCCACAACTTCTCAAATGAGCTTTTTGATTGCCATTCACCGAGATATATTACCTGTTGTAGCAAACTAAATGTTCGACGACTTGTCAATGGCCTCGAGTTCTCATTAGTGAACTTTGAATGCAATAGGGAAACCTGCAGTAAATGGTTAAGTTCATAGAGTATGTCTGTTTTTTCCCACAACTTTTCAAATGAGCTTTTCGATTGCCATTCACCGAGATATATTACCTGTCGTAGCAAACTAAATGTTCGACGACTTGTCAATGGCCTCGAGTTCTCATTAGTGAACTTTGAATGCAATAGGGAAACCTGCAGTAAATGGTTAAGTTCATAGAGTATGTCTGTTTTTTCCCACAACTTTTCAAATGAGCTTTTCGATTGCCATTCACCGAGATATATTACCTGTCGTAGCAAACTAAATGTTCGACGACTTGTCAATGGCCTCGAGTTCTCATTAGTGAACTTTGAATGCAATAGGGAAACCTGCAGTAAATGGTTAAGTTCATAGAGTATGTCTGTTTTTTCCCACAACTTTTCGATTGCGATTCACCGTGATATATTTACCTGTTGTAGCAAACTAAATGTTCGACGACCTGTCAATGGCCTCGAGTTCTAATTAGTGAACTTTGAATGCTATAGGGAATTTTGAGGGATCTTTCCAAGGTTTCGAACACTGGCGTCCAGGAACTCTCCGTGAAGGATACCGAACAGGTAGACATTTAAACGGAGTTAAGAAAGACTCAATAGTCAAATAATATCATACTTCCATACATTTTAATACTGTTTTGGTGTCTGTTATTCCTATCCATTTTTTCGTATATCAGAGCGATGGCGAAGCTAATGAATCCGACGCTGCAGTTAGCTAATGTGGATATTCTCGCTTCTAATGGCGATAATTAGGCCATAAACCACAAAAATTGATCAACTAACTCTCTGATAAGTTCGTGCTGTGGTTGAAGTTGGATCATTTGAGTATTCCAACAAATTATATGGAAATTCATGCTATGCTCTGTGCAGTTTAGAGAGTATGAGAAGAACCATAAGCAATGGTAGAATGGGTTCCCCATTTGTCACCAATCATGTAGCTGAAAATAGATGGGATTCAGAAGGTGGGTTTCAATGGCGGCCCTTTGGTCGAAGTATGAAAGAACAAAAGCTCTGATCAAAAGGGCTGGTGAGGTGAGTTGCTGCCTCCACTTTATGATATGATCTTGTTCTTGTTCTACAATGTTTGGTTAAGATTTGTGCAATCTTCCCCATGTAAAAGGGCTGCTGTTAAGTGCTTCAGATCGCATTTTTTTTAGCTTATTTATGGCTTTGTATTTAAGGGAATTTTGTGTTGTGTTTTGATTTTGTGGAATTTTGAAAATTATAGTATTATGATCGAGTGATCTAAGTTAAGGTAGAGAGTAAAGTTGTGTTAAGTATAGAGCTTATTG

mRNA sequence

TGGATCTGCAACTAAGATCAAGATGAAGCAACCCTTTGTTGCAGCACCTTCTTCCCCATTTCTGCTTTTCGTCGTCTCGCCGGCGCTGTTTCGCCGCCGGTTTTTCTATCGTTCCGGCGACCTTGAACTGAAGTGGAGTGGAGTGGAGTGGCATCAACCGTAAAAAACCCCCAAATTCAAGAAATGCCGGACTCCAATTTCCAAGACGCGATGTACGGTTCCGCCGTCGTGAACAACGGTGGCCGGGTTTTGGATAGCATCCAGAACCGAGTTGGCGATGAAGGTGACGACATTACTGTCGGGGAAGAGTCCATGGACAATCCTCAGATGCGCTTCGAAGATTCTGGGGGGATGAACCGAGTCCAGGACATTGTTCCTTCGTCGTATGTTTCCGGCTCCGATTACAACCCTTTGACTGGAAACGGTGGTGCTGACCAACTTACACTGTCGTTCCGCGGGGAGGTTTACGCTTTTGACTCTGTATCGCCGGACAAGATGTATGAAGGTTTTGGTGCGAAGTATACATATATGCCATGGCATGCCATACTATATGAAGGAGTTGTTTTGAGGTTCGAGTACATGAATACGATCACGATAGATTTAGGAAGGATTTGGTGCGAAGTTCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGGATTCCTGCTGTTGGAAGCGTTCCCGTCAACCAACAGGGTACCAATGGCTTTCCTGTCAGGTCGGTTCAACCACAAAGAGCTGCTTCATTGAATAGGTTTAGGGAGAAGAGAAAAGAAAGGTGTTTTGAGAAGAAAATTCGTTACACCGTGCGAAAAGAAGTTGCACTCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCTAATGCAGATGAAGTGGGCTCATCTTCACTTTTGTCTCAAACGTTGGATCCTGGACACGATGATGGCTTGTTGGAAACCTCATGTACACATTGTGGAACCAGTTCAAAATCTACTCCGATGATGCGTCGTGGGCCTGCTGGCCCTAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCGAATAAGGGAATTTTGAGGGATCTTTCCAAGGTTTCGAACACTGGCGTCCAGGAACTCTCCGTGAAGGATACCGAACAGAGCGATGGCGAAGCTAATGAATCCGACGCTGCAGTTAGCTAATGTGGATATTCTCGCTTCTAATGGCGATAATTAGGCCATAAACCACAAAAATTGATCAACTAACTCTCTGATAAGTTCGTGCTGTGGTTGAAGTTGGATCATTTGAGTATTCCAACAAATTATATGGAAATTCATGCTATGCTCTGTGCAGTTTAGAGAGTATGAGAAGAACCATAAGCAATGGTAGAATGGGTTCCCCATTTGTCACCAATCATGTAGCTGAAAATAGATGGGATTCAGAAGGTGGGTTTCAATGGCGGCCCTTTGGTCGAAGTATGAAAGAACAAAAGCTCTGATCAAAAGGGCTGGTGAGGTGAGTTGCTGCCTCCACTTTATGATATGATCTTGTTCTTGTTCTACAATGTTTGGTTAAGATTTGTGCAATCTTCCCCATGTAAAAGGGCTGCTGTTAAGTGCTTCAGATCGCATTTTTTTTAGCTTATTTATGGCTTTGTATTTAAGGGAATTTTGTGTTGTGTTTTGATTTTGTGGAATTTTGAAAATTATAGTATTATGATCGAGTGATCTAAGTTAAGGTAGAGAGTAAAGTTGTGTTAAGTATAGAGCTTATTG

Coding sequence (CDS)

ATGCCGGACTCCAATTTCCAAGACGCGATGTACGGTTCCGCCGTCGTGAACAACGGTGGCCGGGTTTTGGATAGCATCCAGAACCGAGTTGGCGATGAAGGTGACGACATTACTGTCGGGGAAGAGTCCATGGACAATCCTCAGATGCGCTTCGAAGATTCTGGGGGGATGAACCGAGTCCAGGACATTGTTCCTTCGTCGTATGTTTCCGGCTCCGATTACAACCCTTTGACTGGAAACGGTGGTGCTGACCAACTTACACTGTCGTTCCGCGGGGAGGTTTACGCTTTTGACTCTGTATCGCCGGACAAGATGTATGAAGGTTTTGGTGCGAAGTATACATATATGCCATGGCATGCCATACTATATGAAGGAGTTGTTTTGAGGTTCGAGTACATGAATACGATCACGATAGATTTAGGAAGGATTTGGTGCGAAGTTCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGGATTCCTGCTGTTGGAAGCGTTCCCGTCAACCAACAGGGTACCAATGGCTTTCCTGTCAGGTCGGTTCAACCACAAAGAGCTGCTTCATTGAATAGGTTTAGGGAGAAGAGAAAAGAAAGGTGTTTTGAGAAGAAAATTCGTTACACCGTGCGAAAAGAAGTTGCACTCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCTAATGCAGATGAAGTGGGCTCATCTTCACTTTTGTCTCAAACGTTGGATCCTGGACACGATGATGGCTTGTTGGAAACCTCATGTACACATTGTGGAACCAGTTCAAAATCTACTCCGATGATGCGTCGTGGGCCTGCTGGCCCTAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCGAATAAGGGAATTTTGAGGGATCTTTCCAAGGTTTCGAACACTGGCGTCCAGGAACTCTCCGTGAAGGATACCGAACAGAGCGATGGCGAAGCTAATGAATCCGACGCTGCAGTTAGCTAA

Protein sequence

MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMNRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKYTYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGVQELSVKDTEQSDGEANESDAAVS

Homology

[Close]

BLAST of Cp4.1LG15g03820 vs. Swiss-Prot
Match: GAT24_ARATH (GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42
Identity = 110/189 (58.20%), Postives = 130/189 (68.78%), Query Frame = 1


Query: 146 EVQAVLLLLGGYEIPSGIPA-VGSVPVNQQ--GTNGFPVRSVQPQRAASLNRFREKRKER 205
           +VQAVLLLLGG E+P  +P  +GS   N +  G +G P R   PQR ASL RFREKRK R
Sbjct: 98  KVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGR 157

Query: 206 CFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSS-----SLLSQTLDPGHDDGLLE 265
            F+K IRYTVRKEVALRMQRKKGQF S+K++ D+ GS+     S  S  ++ G +    E
Sbjct: 158 NFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVE-GTETQKPE 217

Query: 266 TSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGV-QELSVKDT 325
             C HCGTS KSTPMMRRGP GPRTLCNACGL WANKG LRDLSKV      Q LS+   
Sbjct: 218 VLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPPQTPQHLSLNKN 277

[Close]

BLAST of Cp4.1LG15g03820 vs. Swiss-Prot
Match: GAT28_ARATH (GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.3e-42
Identity = 108/186 (58.06%), Postives = 123/186 (66.13%), Query Frame = 1


Query: 146 EVQAVLLLLGGYEIPSGIP-AVGSVPVNQQGTN--GFPVRSVQPQRAASLNRFREKRKER 205
           +VQAVLLLLGG E+P   P  +GS   N + ++  G P R   PQR ASL RFREKRK R
Sbjct: 102 KVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGR 161

Query: 206 CFEKKIRYTVRKEVALRMQRKKGQFISSKANADEV---GSSSLLSQTLDPGHDDGL-LET 265
            F+KKIRYTVRKEVALRMQR KGQF S+K+N DE    GSS   +QT      +    E 
Sbjct: 162 NFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEI 221

Query: 266 SCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGVQELSVKDTEQ 325
           SC HCG   KSTPMMRRGPAGPRTLCNACGL WANKG  RDLSK S    Q L +   E 
Sbjct: 222 SCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNED 281

[Close]

BLAST of Cp4.1LG15g03820 vs. Swiss-Prot
Match: GAT20_ORYSJ (GATA transcription factor 20 OS=Oryza sativa subsp. japonica GN=GATA20 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.9e-37
Identity = 98/177 (55.37%), Postives = 113/177 (63.84%), Query Frame = 1


Query: 146 EVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLNRFREKRKERCFE 205
           +VQAVLLLLGG E+  G+ +  S          FP       R ASL RFREKRKER F+
Sbjct: 146 KVQAVLLLLGGRELNPGLGSGASSSAPYSKRLNFP------HRVASLMRFREKRKERNFD 205

Query: 206 KKIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGHDDGLLE------TS 265
           KKIRY+VRKEVALRMQR +GQF SSK   DE  S    S   D   + G +E        
Sbjct: 206 KKIRYSVRKEVALRMQRNRGQFTSSKPKGDEATSELTAS---DGSPNWGSVEGRPPSAAE 265

Query: 266 CTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGVQEL-SVKD 316
           C HCG ++K+TPMMRRGP GPRTLCNACGL WANKG+LRDLSK   T +Q + SV D
Sbjct: 266 CHHCGINAKATPMMRRGPDGPRTLCNACGLMWANKGMLRDLSKAPPTPIQVVASVND 313

[Close]

BLAST of Cp4.1LG15g03820 vs. Swiss-Prot
Match: GAT17_ORYSJ (GATA transcription factor 17 OS=Oryza sativa subsp. japonica GN=GATA17 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.7e-36
Identity = 93/162 (57.41%), Postives = 109/162 (67.28%), Query Frame = 1


Query: 147 VQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLNRFREKRKERCFEK 206
           VQAVLLLLGG E+    P  GSVP     +  +  +   P R ASL RFREKRKER F+K
Sbjct: 126 VQAVLLLLGGRELA---PGSGSVP---SSSAAYSKKMNFPHRMASLMRFREKRKERNFDK 185

Query: 207 KIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGHDDGLLE------TSC 266
           KIRYTVRKEVALRMQR +GQF SSK+ A+E  +S + S    P    G +E        C
Sbjct: 186 KIRYTVRKEVALRMQRNRGQFTSSKSKAEE-ATSVITSSEGSPNW--GAVEGRPPSAAEC 245

Query: 267 THCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSK 303
            HCG S+ STPMMRRGP GPRTLCNACGL WANKG +R+++K
Sbjct: 246 HHCGISAASTPMMRRGPDGPRTLCNACGLMWANKGTMREVTK 278

[Close]

BLAST of Cp4.1LG15g03820 vs. Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-35
Identity = 97/183 (53.01%), Postives = 109/183 (59.56%), Query Frame = 1


Query: 146 EVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQ-----PQRAASLNRFREKRK 205
           +V AVL LLGG    +  P V  +   Q   N  PV   Q     PQRA SL+RFR+KR 
Sbjct: 102 KVDAVLSLLGGSTELAPGPQVMELAQQQ---NHMPVVEYQSRCSLPQRAQSLDRFRKKRN 161

Query: 206 ERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGHDDGLLETSC 265
            RCFEKK+RY VR+EVALRM R KGQF SSK       S +      D   DD   E SC
Sbjct: 162 ARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGT----DQDSAQDDAHPEISC 221

Query: 266 THCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGVQELSVKDTEQSD 324
           THCG SSK TPMMRRGP+GPRTLCNACGL WAN+G LRDLSK +      L   D   S 
Sbjct: 222 THCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDGGSV 277

[Close]

BLAST of Cp4.1LG15g03820 vs. TrEMBL
Match: A0A0A0K2L9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G064580 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 6.2e-112
Identity = 229/339 (67.55%), Postives = 258/339 (76.11%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKY 120
               NRV+D+VPS+Y+SGSDYNPLT                    +   D++        
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLT-------------------GNGGADQL-------- 120

Query: 121 TYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQ 180
                  + + G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+GS PVNQ
Sbjct: 121 ------TLSFRGEVYAFD---SVSPD------KVQAVLLLLGGYEIPSGIPAIGSAPVNQ 180

Query: 181 QGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKAN 240
           QG +GF VRSVQPQRAASL+RFREKRKERCFEKKIRY+VRKEVALRMQRKKGQFISSKA 
Sbjct: 181 QGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAI 240

Query: 241 ADEVGSSSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 300
            DEVGSSS+LSQTLD G DDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN
Sbjct: 241 GDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 297

Query: 301 KGILRDLSKVSNTGVQELSVKDTEQSDGE-ANESDAAVS 332
           KGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 301 KGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

[Close]

BLAST of Cp4.1LG15g03820 vs. TrEMBL
Match: A0A061E2X9_THECC (Zim-like 2 OS=Theobroma cacao GN=TCM_007360 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.3e-73
Identity = 177/341 (51.91%), Postives = 221/341 (64.81%), Query Frame = 1


Query: 1   MPDSNFQD-AMYGSAVVNNGGRVLDSIQNRVGDEGDDITVG-----EESMDNPQMRFEDS 60
           M +SN Q  +MYGS  +N        +Q  + +E DD+  G     EES+DNPQ+ ++++
Sbjct: 1   MANSNHQPTSMYGSGAMN--------MQQNLEEEDDDVPGGTGGGGEESVDNPQIGYQET 60

Query: 61  GGMNRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKYT 120
           GG   V  ++               N G ++ +      +Y            G G+  T
Sbjct: 61  GG---VVTVM---------------NNGMEEAS---HANIY------------GQGSDLT 120

Query: 121 YMPWHA------ILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGS 180
            +P +       + ++G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+G+
Sbjct: 121 VVPGNGGSDQLTLSFQGEVYVFD---SVSPD------KVQAVLLLLGGYEIPSGIPALGT 180

Query: 181 VPVNQQGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFI 240
           VPV Q+G   FP R++QPQRAASLNRFREKRKERCF+KKIRYTVRKEVALRMQRKKGQF 
Sbjct: 181 VPVTQRGLGDFPGRAIQPQRAASLNRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFT 240

Query: 241 SSKANADEVGS-SSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNAC 300
           SSKA +DEV S SS  S T   G D+ + ETSCTHCG SSKSTPMMRRGP GPRTLCNAC
Sbjct: 241 SSKAISDEVASASSGWSVTPGSGQDESMEETSCTHCGISSKSTPMMRRGPTGPRTLCNAC 291

Query: 301 GLKWANKGILRDLSKVSNTGVQELSVKDTEQSDGEANESDA 329
           GLKWANKG+LRDLSKVS   +Q+ S K TEQSD EAN+S+A
Sbjct: 301 GLKWANKGVLRDLSKVSTIPIQDASAKPTEQSDAEANDSEA 291

[Close]

BLAST of Cp4.1LG15g03820 vs. TrEMBL
Match: A0A0B0MJ71_GOSAR (GATA transcription factor 24-like protein OS=Gossypium arboreum GN=F383_19720 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.8e-72
Identity = 177/335 (52.84%), Postives = 213/335 (63.58%), Query Frame = 1


Query: 1   MPDSNFQD-AMYGSAVVNNGGRVLDSIQNRVGDEGDDITVG-----EESMDNPQMRFEDS 60
           M +SN Q  +MYGS   N    + +       +E DD+ VG     EES+DNPQ+ F+++
Sbjct: 1   MANSNHQPTSMYGSGAANMQRNIDE-------EEDDDVPVGAGGGGEESVDNPQIGFQEN 60

Query: 61  GGMNRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKYT 120
           G +  V                   N G D+ +      VY   S S      G   + T
Sbjct: 61  GAVVAVM------------------NNGMDEAS---HAHVYGQGSDSTSAPGNGGADQLT 120

Query: 121 YMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQQ 180
                 + ++G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+G+V V Q+
Sbjct: 121 ------LSFQGEVYVFD---SVSPD------KVQAVLLLLGGYEIPSGIPAMGTVSVTQR 180

Query: 181 GTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANA 240
           G N FP RS+QPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQF SSKA +
Sbjct: 181 GLNDFPGRSIQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFTSSKAIS 240

Query: 241 DEVGS-SSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 300
           +EV S SS  S T   G D+ + E  CTHCG SSK TPMMRRGPAGPRTLCNACGLKWAN
Sbjct: 241 EEVASASSGWSGTPGSGQDENMQEVLCTHCGISSKRTPMMRRGPAGPRTLCNACGLKWAN 292

Query: 301 KGILRDLSKVSNTGVQELSVKDTEQSDGEANESDA 329
           KG+LRDLSKVS   + + +VK  EQSD EANES+A
Sbjct: 301 KGVLRDLSKVSTVVIPDPTVKTAEQSDAEANESEA 292

[Close]

BLAST of Cp4.1LG15g03820 vs. TrEMBL
Match: A0A0D2PM93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G017800 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.4e-71
Identity = 176/336 (52.38%), Postives = 211/336 (62.80%), Query Frame = 1


Query: 1   MPDSNFQDA-MYGSAVVNNGGRVLDSIQNRVGDEGDDITVG------EESMDNPQMRFED 60
           M +SN Q   MYGS   N        +Q  + +E DD   G      EES+DNPQ+ F++
Sbjct: 1   MANSNHQRTPMYGSGAAN--------MQRNIDEEEDDDVPGGAGGGGEESVDNPQIGFQE 60

Query: 61  SGGMNRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKY 120
           +G +  V                   N G D+ +      VY   S S      G   + 
Sbjct: 61  NGAVVAVM------------------NNGMDEAS---HAHVYGQGSDSTSAPGNGGADQL 120

Query: 121 TYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQ 180
           T      + ++G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+G+V V Q
Sbjct: 121 T------LSFQGEVYVFD---SVSPD------KVQAVLLLLGGYEIPSGIPAMGTVSVTQ 180

Query: 181 QGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKAN 240
           +G + FP RS+QPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQF SSKA 
Sbjct: 181 RGLSDFPGRSIQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFTSSKAI 240

Query: 241 ADEVGS-SSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWA 300
           ++EV S SS  S T   G D+ + E  CTHCG SSK TPMMRRGPAGPRTLCNACGLKWA
Sbjct: 241 SEEVASASSGWSGTPGSGQDENIQEVLCTHCGISSKKTPMMRRGPAGPRTLCNACGLKWA 292

Query: 301 NKGILRDLSKVSNTGVQELSVKDTEQSDGEANESDA 329
           NKG+LRDLSKVS   + + +VK  EQSD EANES+A
Sbjct: 301 NKGVLRDLSKVSTVAIPDPTVKTAEQSDAEANESEA 292

[Close]

BLAST of Cp4.1LG15g03820 vs. TrEMBL
Match: A0A0D2V9Q1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G055000 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.9e-69
Identity = 173/330 (52.42%), Postives = 216/330 (65.45%), Query Frame = 1


Query: 1   MPDSNFQD-AMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMNR 60
           M +SN    ++YGS  +N      D  ++  G  G     GEES+DNPQ+ +++SGG   
Sbjct: 1   MENSNHHSTSLYGSGAMNMQRNPEDEEEDVPGGGGGG---GEESVDNPQIGYQESGG--G 60

Query: 61  VQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKYTYMPWH 120
           V  ++ +     S  N L G G    LT + +G      + S D++              
Sbjct: 61  VVTVMNNGMEEASHAN-LYGQGS--DLT-AVQG------NSSADQL-------------- 120

Query: 121 AILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGF 180
            + ++G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+ + P+ Q+G   F
Sbjct: 121 TLSFQGEVYVFD---SVSPD------KVQAVLLLLGGYEIPSGIPALAATPIAQRGMGDF 180

Query: 181 PVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGS 240
           P RS+QP RAASLNRFREKRKERCF+KKIRYTVRKEVALRMQRKKGQF S+KA +DEV S
Sbjct: 181 PGRSIQPHRAASLNRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSAKAISDEVAS 240

Query: 241 -SSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILR 300
            SS  S T   G D+ + ET C+HCG SSK TPMMRRGPAGPRTLCNACGLKWANKG+LR
Sbjct: 241 ASSGWSGTPGSGQDESMQETLCSHCGISSKKTPMMRRGPAGPRTLCNACGLKWANKGVLR 292

Query: 301 DLSKVSNTGVQELSVKDTEQSDGEANESDA 329
           DLSKVS   +Q+ +VK TEQSD EANES+A
Sbjct: 301 DLSKVSMVAIQDPTVKTTEQSDAEANESEA 292

[Close]

BLAST of Cp4.1LG15g03820 vs. TAIR10
Match: AT3G21175.1 (AT3G21175.1 ZIM-like 1)

HSP 1 Score: 175.3 bits (443), Expect = 6.4e-44
Identity = 110/189 (58.20%), Postives = 130/189 (68.78%), Query Frame = 1


Query: 146 EVQAVLLLLGGYEIPSGIPA-VGSVPVNQQ--GTNGFPVRSVQPQRAASLNRFREKRKER 205
           +VQAVLLLLGG E+P  +P  +GS   N +  G +G P R   PQR ASL RFREKRK R
Sbjct: 98  KVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGR 157

Query: 206 CFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSS-----SLLSQTLDPGHDDGLLE 265
            F+K IRYTVRKEVALRMQRKKGQF S+K++ D+ GS+     S  S  ++ G +    E
Sbjct: 158 NFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVE-GTETQKPE 217

Query: 266 TSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGV-QELSVKDT 325
             C HCGTS KSTPMMRRGP GPRTLCNACGL WANKG LRDLSKV      Q LS+   
Sbjct: 218 VLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPPQTPQHLSLNKN 277

[Close]

BLAST of Cp4.1LG15g03820 vs. TAIR10
Match: AT1G51600.1 (AT1G51600.1 ZIM-LIKE 2)

HSP 1 Score: 173.3 bits (438), Expect = 2.5e-43
Identity = 108/186 (58.06%), Postives = 123/186 (66.13%), Query Frame = 1


Query: 146 EVQAVLLLLGGYEIPSGIP-AVGSVPVNQQGTN--GFPVRSVQPQRAASLNRFREKRKER 205
           +VQAVLLLLGG E+P   P  +GS   N + ++  G P R   PQR ASL RFREKRK R
Sbjct: 102 KVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGR 161

Query: 206 CFEKKIRYTVRKEVALRMQRKKGQFISSKANADEV---GSSSLLSQTLDPGHDDGL-LET 265
            F+KKIRYTVRKEVALRMQR KGQF S+K+N DE    GSS   +QT      +    E 
Sbjct: 162 NFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEI 221

Query: 266 SCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGVQELSVKDTEQ 325
           SC HCG   KSTPMMRRGPAGPRTLCNACGL WANKG  RDLSK S    Q L +   E 
Sbjct: 222 SCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNED 281

[Close]

BLAST of Cp4.1LG15g03820 vs. TAIR10
Match: AT4G24470.3 (AT4G24470.3 GATA-type zinc finger protein with TIFY domain)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-37
Identity = 93/162 (57.41%), Postives = 103/162 (63.58%), Query Frame = 1


Query: 146 EVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQ-----PQRAASLNRFREKRK 205
           +V AVL LLGG    +  P V  +   Q   N  PV   Q     PQRA SL+RFR+KR 
Sbjct: 102 KVDAVLSLLGGSTELAPGPQVMELAQQQ---NHMPVVEYQSRCSLPQRAQSLDRFRKKRN 161

Query: 206 ERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGHDDGLLETSC 265
            RCFEKK+RY VR+EVALRM R KGQF SSK       S +      D   DD   E SC
Sbjct: 162 ARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGT----DQDSAQDDAHPEISC 221

Query: 266 THCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSK 303
           THCG SSK TPMMRRGP+GPRTLCNACGL WAN+G LRDLSK
Sbjct: 222 THCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSK 256

[Close]

BLAST of Cp4.1LG15g03820 vs. TAIR10
Match: AT1G08010.1 (AT1G08010.1 GATA transcription factor 11)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07
Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 1


Query: 243 LSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRD--- 302
           +S TL+  + DG++   CTHC T+   TP  R GP+GP+TLCNACG+++ +  ++ +   
Sbjct: 206 VSSTLEASNSDGIVR-KCTHCETTK--TPQWREGPSGPKTLCNACGVRFRSGRLVPEYRP 265

Query: 303 ---------LSKVSNTGVQELSVKDTEQSD 321
                    +   S+  + E+  KD EQ D
Sbjct: 266 ASSPTFIPAVHSNSHRKIIEMRRKDDEQFD 292

[Close]

BLAST of Cp4.1LG15g03820 vs. TAIR10
Match: AT1G08000.1 (AT1G08000.1 GATA transcription factor 10)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-07
Identity = 25/62 (40.32%), Postives = 40/62 (64.52%), Query Frame = 1


Query: 244 SQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKV 303
           S TL+    DG++   CTHC T +  TP  R+GP+GP+TLCNACG+++ +  ++ +    
Sbjct: 205 SSTLESSKSDGIVRI-CTHCETIT--TPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPA 263

Query: 304 SN 306
           S+
Sbjct: 265 SS 263

[Close]

BLAST of Cp4.1LG15g03820 vs. NCBI nr
Match: gi|659110318|ref|XP_008455164.1| (PREDICTED: GATA transcription factor 24-like isoform X2 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-113
Identity = 233/339 (68.73%), Postives = 261/339 (76.99%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMN-- 60
           MPDSNFQDAMYGS V+N+GGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM+  
Sbjct: 1   MPDSNFQDAMYGSGVMNDGGRDLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  -----RVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKY 120
                RV+D+VPS+YVSGSDYNPLT                    +   D++        
Sbjct: 61  VSVISRVEDVVPSTYVSGSDYNPLT-------------------GNGGADQL-------- 120

Query: 121 TYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQ 180
                  + + G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+GSVPVNQ
Sbjct: 121 ------TLSFRGEVYAFD---SVSPD------KVQAVLLLLGGYEIPSGIPAIGSVPVNQ 180

Query: 181 QGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKAN 240
           QG +GFPVRSVQPQRAASL+RFREKRKERCFEKKIRY+VRKEVALRMQRKKGQFISSKA 
Sbjct: 181 QGADGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAI 240

Query: 241 ADEVGSSSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 300
            DEVGSSS+LSQTLD G DDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN
Sbjct: 241 GDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 297

Query: 301 KGILRDLSKVSNTGVQELSVKDTEQSDGE-ANESDAAVS 332
           KGILRDLSKVSN  +QE S K+ EQSDGE ANES+AA++
Sbjct: 301 KGILRDLSKVSNPSIQEPSAKEIEQSDGEAANESNAAIN 297

[Close]

BLAST of Cp4.1LG15g03820 vs. NCBI nr
Match: gi|659110314|ref|XP_008455162.1| (PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-113
Identity = 233/339 (68.73%), Postives = 261/339 (76.99%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMN-- 60
           MPDSNFQDAMYGS V+N+GGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM+  
Sbjct: 1   MPDSNFQDAMYGSGVMNDGGRDLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  -----RVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKY 120
                RV+D+VPS+YVSGSDYNPLT                    +   D++        
Sbjct: 61  VSVISRVEDVVPSTYVSGSDYNPLT-------------------GNGGADQL-------- 120

Query: 121 TYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQ 180
                  + + G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+GSVPVNQ
Sbjct: 121 ------TLSFRGEVYAFD---SVSPD------KVQAVLLLLGGYEIPSGIPAIGSVPVNQ 180

Query: 181 QGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKAN 240
           QG +GFPVRSVQPQRAASL+RFREKRKERCFEKKIRY+VRKEVALRMQRKKGQFISSKA 
Sbjct: 181 QGADGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAI 240

Query: 241 ADEVGSSSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 300
            DEVGSSS+LSQTLD G DDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN
Sbjct: 241 GDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 297

Query: 301 KGILRDLSKVSNTGVQELSVKDTEQSDGE-ANESDAAVS 332
           KGILRDLSKVSN  +QE S K+ EQSDGE ANES+AA++
Sbjct: 301 KGILRDLSKVSNPSIQEPSAKEIEQSDGEAANESNAAIN 297

[Close]

BLAST of Cp4.1LG15g03820 vs. NCBI nr
Match: gi|449438218|ref|XP_004136886.1| (PREDICTED: GATA transcription factor 24 isoform X1 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 8.9e-112
Identity = 229/339 (67.55%), Postives = 258/339 (76.11%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKY 120
               NRV+D+VPS+Y+SGSDYNPLT                    +   D++        
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLT-------------------GNGGADQL-------- 120

Query: 121 TYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQ 180
                  + + G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+GS PVNQ
Sbjct: 121 ------TLSFRGEVYAFD---SVSPD------KVQAVLLLLGGYEIPSGIPAIGSAPVNQ 180

Query: 181 QGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKAN 240
           QG +GF VRSVQPQRAASL+RFREKRKERCFEKKIRY+VRKEVALRMQRKKGQFISSKA 
Sbjct: 181 QGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAI 240

Query: 241 ADEVGSSSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 300
            DEVGSSS+LSQTLD G DDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN
Sbjct: 241 GDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 297

Query: 301 KGILRDLSKVSNTGVQELSVKDTEQSDGE-ANESDAAVS 332
           KGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 301 KGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

[Close]

BLAST of Cp4.1LG15g03820 vs. NCBI nr
Match: gi|778724486|ref|XP_011658814.1| (PREDICTED: GATA transcription factor 24 isoform X2 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 8.9e-112
Identity = 229/339 (67.55%), Postives = 258/339 (76.11%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKY 120
               NRV+D+VPS+Y+SGSDYNPLT                    +   D++        
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLT-------------------GNGGADQL-------- 120

Query: 121 TYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQ 180
                  + + G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+GS PVNQ
Sbjct: 121 ------TLSFRGEVYAFD---SVSPD------KVQAVLLLLGGYEIPSGIPAIGSAPVNQ 180

Query: 181 QGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKAN 240
           QG +GF VRSVQPQRAASL+RFREKRKERCFEKKIRY+VRKEVALRMQRKKGQFISSKA 
Sbjct: 181 QGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAI 240

Query: 241 ADEVGSSSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 300
            DEVGSSS+LSQTLD G DDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN
Sbjct: 241 GDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 297

Query: 301 KGILRDLSKVSNTGVQELSVKDTEQSDGE-ANESDAAVS 332
           KGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 301 KGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

[Close]

BLAST of Cp4.1LG15g03820 vs. NCBI nr
Match: gi|700188515|gb|KGN43748.1| (hypothetical protein Csa_7G064580 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 8.9e-112
Identity = 229/339 (67.55%), Postives = 258/339 (76.11%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKMYEGFGAKY 120
               NRV+D+VPS+Y+SGSDYNPLT                    +   D++        
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLT-------------------GNGGADQL-------- 120

Query: 121 TYMPWHAILYEGVVLRFEYMNTITIDLGRIWCEVQAVLLLLGGYEIPSGIPAVGSVPVNQ 180
                  + + G V  F+   +++ D      +VQAVLLLLGGYEIPSGIPA+GS PVNQ
Sbjct: 121 ------TLSFRGEVYAFD---SVSPD------KVQAVLLLLGGYEIPSGIPAIGSAPVNQ 180

Query: 181 QGTNGFPVRSVQPQRAASLNRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKAN 240
           QG +GF VRSVQPQRAASL+RFREKRKERCFEKKIRY+VRKEVALRMQRKKGQFISSKA 
Sbjct: 181 QGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAI 240

Query: 241 ADEVGSSSLLSQTLDPGHDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 300
            DEVGSSS+LSQTLD G DDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN
Sbjct: 241 GDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWAN 297

Query: 301 KGILRDLSKVSNTGVQELSVKDTEQSDGE-ANESDAAVS 332
           KGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 301 KGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g03820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GAT24_ARATH	1.1e-42	58.20	GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2 SV=2	[more]
GAT28_ARATH	4.3e-42	58.06	GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2 SV=1	[more]
GAT20_ORYSJ	1.9e-37	55.37	GATA transcription factor 20 OS=Oryza sativa subsp. japonica GN=GATA20 PE=2 SV=1	[more]
GAT17_ORYSJ	4.7e-36	57.41	GATA transcription factor 17 OS=Oryza sativa subsp. japonica GN=GATA17 PE=2 SV=1	[more]
GAT25_ARATH	1.4e-35	53.01	GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2 SV=2	[more]

BLAST of Cp4.1LG15g03820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2L9_CUCSA	6.2e-112	67.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G064580 PE=4 SV=1	[more]
A0A061E2X9_THECC	4.3e-73	51.91	Zim-like 2 OS=Theobroma cacao GN=TCM_007360 PE=4 SV=1	[more]
A0A0B0MJ71_GOSAR	4.8e-72	52.84	GATA transcription factor 24-like protein OS=Gossypium arboreum GN=F383_19720 PE...	[more]
A0A0D2PM93_GOSRA	1.4e-71	52.38	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G017800 PE=4 SV=1	[more]
A0A0D2V9Q1_GOSRA	2.9e-69	52.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G055000 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g03820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21175.1	6.4e-44	58.20	ZIM-like 1	[more]
AT1G51600.1	2.5e-43	58.06	ZIM-LIKE 2	[more]
AT4G24470.3	1.5e-37	57.41	GATA-type zinc finger protein with TIFY domain	[more]
AT1G08010.1	2.2e-07	34.44	GATA transcription factor 11	[more]
AT1G08000.1	3.7e-07	40.32	GATA transcription factor 10	[more]

BLAST of Cp4.1LG15g03820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110318\|ref\|XP_008455164.1\|	1.2e-113	68.73	PREDICTED: GATA transcription factor 24-like isoform X2 [Cucumis melo]	[more]
gi\|659110314\|ref\|XP_008455162.1\|	1.2e-113	68.73	PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo]	[more]
gi\|449438218\|ref\|XP_004136886.1\|	8.9e-112	67.55	PREDICTED: GATA transcription factor 24 isoform X1 [Cucumis sativus]	[more]
gi\|778724486\|ref\|XP_011658814.1\|	8.9e-112	67.55	PREDICTED: GATA transcription factor 24 isoform X2 [Cucumis sativus]	[more]
gi\|700188515\|gb\|KGN43748.1\|	8.9e-112	67.55	hypothetical protein Csa_7G064580 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0043565	sequence-specific DNA binding
GO:0008270	zinc ion binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR013088	Znf_NHR/GATA
IPR010402	CCT_domain
IPR010399	Tify_dom
IPR000679	Znf_GATA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g03820.1	Cp4.1LG15g03820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 260..295 score: 1.1
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 254..307 score: 3.3
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 260..287 scor
IPR000679	Zinc finger, GATA-type	PROFILE	PS50114	GATA_ZN_FINGER_2	coord: 259..311 score: 9
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 83..104 score: 8.
IPR010399	Tify domain	PROFILE	PS51320	TIFY	coord: 79..114 score: 9
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 188..230 score: 3.3
IPR010402	CCT domain	PROFILE	PS51017	CCT	coord: 188..230 score: 13
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	G3DSA:3.30.50.10		coord: 258..301 score: 9.1
None	No IPR available	PANTHER	PTHR10071	TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR	coord: 14..105 score: 3.2E-100coord: 148..305 score: 3.2E
None	No IPR available	PANTHER	PTHR10071:SF186	SUBFAMILY NOT NAMED	coord: 14..105 score: 3.2E-100coord: 148..305 score: 3.2E
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 257..306 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG15g03820	Cucsa.218190	Cucumber (Gy14) v1	cgycpeB0597
Cp4.1LG15g03820	CmaCh11G016740	Cucurbita maxima (Rimu)	cmacpeB116
Cp4.1LG15g03820	CmaCh19G004830	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g03820	CmoCh19G005010	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g03820	CmoCh11G014550	Cucurbita moschata (Rifu)	cmocpeB095
Cp4.1LG15g03820	Cla012926	Watermelon (97103) v1	cpewmB237
Cp4.1LG15g03820	Csa7G064580	Cucumber (Chinese Long) v2	cpecuB263
Cp4.1LG15g03820	MELO3C018614	Melon (DHL92) v3.5.1	cpemeB220
Cp4.1LG15g03820	ClCG09G016150	Watermelon (Charleston Gray)	cpewcgB218
Cp4.1LG15g03820	CSPI07G05820	Wild cucumber (PI 183967)	cpecpiB265
Cp4.1LG15g03820	Lsi03G006960	Bottle gourd (USVL1VR-Ls)	cpelsiB208
Cp4.1LG15g03820	MELO3C018614.2	Melon (DHL92) v3.6.1	cpemedB259
Cp4.1LG15g03820	CsaV3_7G006810	Cucumber (Chinese Long) v3	cpecucB0328
Cp4.1LG15g03820	Bhi05G000761	Wax gourd	cpewgoB0334
Cp4.1LG15g03820	CsGy7G005510	Cucumber (Gy14) v2	cgybcpeB916
Cp4.1LG15g03820	Carg23065	Silver-seed gourd	carcpeB1031
Cp4.1LG15g03820	Carg22805	Silver-seed gourd	carcpeB0401

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG15g03820	Cp4.1LG04g07180	Cucurbita pepo (Zucchini)	cpecpeB269

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g03820	Cucurbita maxima (Rimu)	cmacpeB719
Cp4.1LG15g03820	Cucurbita moschata (Rifu)	cmocpeB672
Cp4.1LG15g03820	Wild cucumber (PI 183967)	cpecpiB258
Cp4.1LG15g03820	Cucumber (Chinese Long) v2	cpecuB258
Cp4.1LG15g03820	Bottle gourd (USVL1VR-Ls)	cpelsiB207
Cp4.1LG15g03820	Watermelon (Charleston Gray)	cpewcgB228
Cp4.1LG15g03820	Watermelon (97103) v1	cpewmB248
Cp4.1LG15g03820	Cucumber (Gy14) v2	cgybcpeB911
Cp4.1LG15g03820	Silver-seed gourd	carcpeB0526
Cp4.1LG15g03820	Cucumber (Chinese Long) v3	cpecucB0323
Cp4.1LG15g03820	Wax gourd	cpewgoB0311
Cp4.1LG15g03820	Wax gourd	cpewgoB0317
Cp4.1LG15g03820	Cucurbita pepo (Zucchini)	cpecpeB260
Cp4.1LG15g03820	Cucumber (Gy14) v1	cgycpeB0594