CmaCh19G004830 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G004830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	GATA transcription factor 28
Location	Cma_Chr19 : 5772608 .. 5777536 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGACTCCAATTTCCAAGACGCGATGTACGGTTCCGCCGTCGTGAACAACGGTGGCCGGGTTTTGGATAGCATTCAGAACCGAGTTGGCGATGAAGGTGACGACATTACTGTGGGGGAAGAGTCCATGGACAATCCTCAGATGCGCTTCGAAGATTCCGGGGGAATGAACCGAGTCCAGGACATTGTTCCTTCATCGTATGTTTCCGGCTCCGATTACAACCCTTTGACTGGAAACGGTGGTGCTGACCAACTTACGCTGTCGTTCCGCGGAGAGGTTTACGCTTTTGACTCTGTATCGCCGGACAAGGTTTGGTTTTCAATTGGGTGTCGATAGTCTTCGTAAATTATGCACTAGTTGTGTAATTCTTCTTCTACTTACTGAAGATATATAGTCTTTGAAGCTGGGTTTGGGTAATTTGCGAACAATATGATGAACTTTGAACAATTTGACTCAATGCTTCGTTATGACATTCAACTTCAAGCTCATTCAAATTGGGGAGGGATTTTGTAAAGTAATATTGTTGGTTTAAAGGATTTTCTGAATTGTTAGAGTGGGTATAATTTTAAAACCCTGTTTTAGTTTCCTACAGGGACCTAATTGTGTTGTGTTGCTGTATTGTTGGAACATTTGGATGATGAATGGGAAGTTTTTTCTTTTGAAATATGATTGAAAAAGAAGAAAGGAATATGATGATAAATGAACCGATTGTGCCAGTTGAACTGAATACTGCTGTTGTCAAATTAGATGTAGGAAGGATTTTGTGCGAAGTATACATATATGCCATGCCATGCCATACTATATGAAGGAGTTTTTTTGAGGTTCGAGTACATGAATACGATCACGATAGATTTAGGAAGGATTTGGTACGAAGTATACATATATGCCATGCCATACTATATGAAGGAGTTGTTTTGAGGTTCGAGTACATGAACACGAACACGAGGGGTTTTAAGTTTTTTGTGGTTAAATTTGACAGGTGCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGGATTCCTGCTGTTGGAAGTGTTCCCGTCAACCAACAGGTATACGTGCACATTATTATTTTAATGGTGTATTGATTGAAACCATCTGGTGTTCTTGATTTCCTACCTCGGTTAACTTTTGTTCTAATTCTTTCAGGGTACCAATGGCTTTCCTGTCAGGTCGGTTCAACCACAAAGAGCTGCTTCATTGAGTAGGTTTAGAGAGAAGAGAAAAGAAAGGTGTTTTGAGAAGAAAATTCGTTACACCGTGCGAAAAGAAGTTGCACTCAGGTATAACTTATAAATAGATACCTGTTTATTTATTTATTAGACGGTTGAAGTTAAGTCAAGGGAGCATAGAGAGATCCCTTCCTCTCCCGCTCTCACTCAGAGATCAAGTAAAAAATTACCAAAAAGATATCATGTGAGATCCCACATTGATTGGGGAGGAGAACAAAACATTCTTTATAAGGGTGTCGAAACTTTTCCCTAGCAGACGTGTTTTAAAAATTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGAACAATATCTGCTAGCGGTGGGCTTGGGCGGTTACATATCCTTTGCCAGACCCTCTCTCCTCTCTATATTCCCTCTCTGTCAGCCTTACTAACTAATATGCTTGAGTCGTGCACAAACTATGTCATCATCCTACATGTCTCACCCTTTCCTCGTTTACCAGCATACACTTCAGTGATTGGGGCCTATCAGTATATTAAGTAGAATCAACAACTAGAAAACAGCAGGGATAGGATAGTGTGAAACAGCTATATTATGATTTTGTGGATCGTCTCTGATCTTGGTTGTGGTCAAATGGGATTTTCTAAAACATTAGTTTTTGAGGCAGGTTGCATTTCAATTTTAGATCTTCAGATGAGAAAAGGTGAAGGAAGTTTCTTGTAACAACCCAAGCCCACCGCTAAATAATATTGTCCTTTTTGGGTTTTCCGTTCTGGCTTCTCCTCAAAGTTTTAAAACGCGTCTCTTAGGGAAAAATTTCTACACTCTTGTAAATAGCGCTTTGTTCCCCTCTCCAACCAATGTAGGATCTCACAATCCACTCTCCTTAGGGGCCCAACGTTCATCGCTGGCACACTGCCCGATAACCGACTTCATGAGGCTGACGGTAATACGTAACGGGCCAAAGCGGACAATAACTGTTAGCGGTGGGCTTGGGTTGTTATTTCTAATGTGGGAAAAATGTTTTATTGATGTATCTTAGAGGTGTTATAGATGTTCGATGGGCTGCTCATAATATTTAAGTTTTTTTTACTTGAAATGAAGAAAATAAGAGCTGCTAATAGAAAGGAAATTACATATCTGAAGAAGATGGAAGTTGATTGGAATAACTTTCTTTAATCTTGTGCATATATATATATATATATATTTCTAATAACTTTCAGAAAAAGAAAGATGAATTTATAACTGTGATGATATAGTCCAAAAAGCATATCTTAGTGTACTTCGAAAGATATCTTCTAATCTATTCAATGTTGTTTCTGTTGTATGCAATTCAATGTGATATATTCGTCTCCTTCATCATCCAGAGTATATAAACTAAGTTACTTTATTGCATTATTCCATTCTTATTGTTTGTAGTGCTCAGCATTTGACAATTCAAGAATTTAAACTAGCTCTAGTCAAATGCTCAAATCATCAAAGGACAGAAAAAATCATTTTGTTCTCGAGACATGTTCTAACAACTCTTGTCTGGATTCATCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCTAATGCAGATGAAGTGGGCTCATCTTCACTTTTGTCTCAAACATTGGATCCTGGACAAGATGATGGCTTGTTGGAAACCTCGTAAGTATTGATCGATCCTCACAAGTCCCATTTTCTAACTTTGAATGACCCTGCTGGTAGTCTGAGGCTCATCAATTTGTAACCTTACGCTTGAGTTGCGAGTTGGTTTTGCATCTAACTGGAATACCAAAATTCTAGAAGGAATAGAAAAATTATCAATTCTCATTCATACTGGAACAAATTCAATGATCTGTTTTACTAATAATGTCTTTCATTATTTGTTTATGCAGATGTACACATTGTGGAACCAGTTCAAAATCTACTCCGATGATGCGTCGTGGGCCTGCTGGCCCTAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCCAATAAGGTTTGTTAATCGAGTCCTTTAGGTGATATAACATCGTCCATGAAATCGAGTCCTTTACAGTTGTCTTGGGCTGAAGCCTGCATAATTATTTGGAGATAAGTGATGTGAGCGAAGTATGTTGTTTAACATTTCATTATCAAAGACACCTGTGCTAGGCTTGTGGGTTTGATTTAGGAGATGCTTTCAGCTGGTTGATGATGGTTTTAAGTTAGTTTTGTAGATCATTCTTGGTTTATAGATTTTCATTGGTTAGGAAGGAATACCAATAGGAACCGAACCTCGAGGCGGTTTCTTCCTTTGTGAATCTTTTCCTGTATGCCAGTAGAAAGACTTGGATGCAATCGGTTGCCCGAGATATTTAACTTCGTTCTTGACTATTGAGTTCCACCACACCACCTCTTGCCTTAAAATCTGCAGTAGATAGCCAAGTTCATAAAGTATATCTGTTTTATCCCACAACTTTTCAAATGAGCTTTTCTATTGCGATTCACAGAGATACATTAGCTGTTGTAGCAAACTAAATGTTTGACGACTTGTCAATGGCCTCGAGTTCTCATTAGTGATCTTCGAATGCAATAGGGAAATCTGCAGTAGATAGATAAGTTCATAGAGTATGTCTGTTTTTTACCACAACTTTCGAGTGAGCTTTTCGATTGCGGTTCACAGAGATATATTAGCTGTTGTAACAAACTAAATGTTCGACGACTTATCAATGGCCTCGAGTTCTCATTAGTGAACTCTGAATGCAATAGGGAAACCTGCAGTAAATAGTTAATTCCATAGGTGTATGTCTGTTTTTTCCCACAACTTTTCGTTTGCGATTCACCGAGATATATTACCTGTTGTAGCAAACTAAATGTTCGATGACTTGTCAATGGCCTCGAGTTCTAATTAGTGAACTTTGAATGGAATAGGGAATTTTGAGGGATCTTTCCAAGGTTTCGAACTCGGGCGTTCAAGAACTCTCCGTGAAGGATACCGAACAGGTAGACATTTAAACAGAGTTAAGAAAGACTCAATAGTTAAATAATATCATACTTCCATACATTTTAATACTGTTTTGGTGTCTGTTATTGCTATCCATCTTTTCCTATATCAGAGCGATGGCGAAGCTAATGAATCCGACGCTGCAGTTAGCTAATGTGGATATTCTCGCTTCTAATGGCGATAATTAGGCCATAAACCACAAAAATTGATCAACTAACTCTCTGATAAGTTCGTGCTGTGGTTGAAGTTGGATCATTTGAGTATTCCAACAAATTATATGGAAATTCATGCTATGCTCTGTGCAGTTTAGAGAGTATAAGAAATAAGCAATGGTAGAATGGGTTCCCCATTTGTCACCAATCATGTAGCTGAAAATAGATGGGATTCAGAAGGTGGGTTTCAATGGCGGCCTTTTGGTCGAAGTATCAAAGAACAAAAGCTCTGATCAAAGGGCTGGTGAGGTGAGTTGCTGCCTCCACTTTAGGATATGATCTTATTCTTGTTCTACAATGTTTGGTTAAGATTTGTGCAATCTTTTCCCCATGTAAATGGGCAGTTAAGTGCTTCAGATCACATTTTTTTTAGCTTATTTATGGCTTAGAAGTGAAGGTAAATAATTTGTAGTGTAATTTCTGGCCTCTTTGTTACTTTGTATTTAAGGGAATTTTGTGTTGTGTTTTGATTTTGTGAAATTTTGAAAATTATAGTATTATGATCGAGTGATCAAGTTAT

mRNA sequence

ATGCCGGACTCCAATTTCCAAGACGCGATGTACGGTTCCGCCGTCGTGAACAACGGTGGCCGGGTTTTGGATAGCATTCAGAACCGAGTTGGCGATGAAGGTGACGACATTACTGTGGGGGAAGAGTCCATGGACAATCCTCAGATGCGCTTCGAAGATTCCGGGGGAATGAACCGAGTCCAGGACATTGTTCCTTCATCGTATGTTTCCGGCTCCGATTACAACCCTTTGACTGGAAACGGTGGTGCTGACCAACTTACGCTGTCGTTCCGCGGAGAGGTTTACGCTTTTGACTCTGTATCGCCGGACAAGGTGCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGGATTCCTGCTGTTGGAAGTGTTCCCGTCAACCAACAGGGTACCAATGGCTTTCCTGTCAGGTCGGTTCAACCACAAAGAGCTGCTTCATTGAGTAGGTTTAGAGAGAAGAGAAAAGAAAGGTGTTTTGAGAAGAAAATTCGTTACACCGTGCGAAAAGAAGTTGCACTCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCTAATGCAGATGAAGTGGGCTCATCTTCACTTTTGTCTCAAACATTGGATCCTGGACAAGATGATGGCTTGTTGGAAACCTCATGTACACATTGTGGAACCAGTTCAAAATCTACTCCGATGATGCGTCGTGGGCCTGCTGGCCCTAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCCAATAAGGGAATTTTGAGGGATCTTTCCAAGGTTTCGAACTCGGGCGTTCAAGAACTCTCCGTGAAGGATACCGAACAGAGCGATGGCGAAGCTAATGAATCCGACGCTGCAGTTAGCTAATGTGGATATTCTCGCTTCTAATGGCGATAATTAGGCCATAAACCACAAAAATTGATCAACTAACTCTCTGATAAGTTCGTGCTGTGGTTGAAGTTGGATCATTTGAGTATTCCAACAAATTATATGGAAATTCATGCTATGCTCTGTGCAGTTTAGAGAGTATAAGAAATAAGCAATGGTAGAATGGGTTCCCCATTTGTCACCAATCATGTAGCTGAAAATAGATGGGATTCAGAAGGTGGGTTTCAATGGCGGCCTTTTGGTCGAAGTATCAAAGAACAAAAGCTCTGATCAAAGGGCTGGTGAGGTGAGTTGCTGCCTCCACTTTAGGATATGATCTTATTCTTGTTCTACAATGTTTGGTTAAGATTTGTGCAATCTTTTCCCCATGTAAATGGGCAGTTAAGTGCTTCAGATCACATTTTTTTTAGCTTATTTATGGCTTAGAAGTGAAGGTAAATAATTTGTAGTGTAATTTCTGGCCTCTTTGTTACTTTGTATTTAAGGGAATTTTGTGTTGTGTTTTGATTTTGTGAAATTTTGAAAATTATAGTATTATGATCGAGTGATCAAGTTAT

Coding sequence (CDS)

ATGCCGGACTCCAATTTCCAAGACGCGATGTACGGTTCCGCCGTCGTGAACAACGGTGGCCGGGTTTTGGATAGCATTCAGAACCGAGTTGGCGATGAAGGTGACGACATTACTGTGGGGGAAGAGTCCATGGACAATCCTCAGATGCGCTTCGAAGATTCCGGGGGAATGAACCGAGTCCAGGACATTGTTCCTTCATCGTATGTTTCCGGCTCCGATTACAACCCTTTGACTGGAAACGGTGGTGCTGACCAACTTACGCTGTCGTTCCGCGGAGAGGTTTACGCTTTTGACTCTGTATCGCCGGACAAGGTGCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGGATTCCTGCTGTTGGAAGTGTTCCCGTCAACCAACAGGGTACCAATGGCTTTCCTGTCAGGTCGGTTCAACCACAAAGAGCTGCTTCATTGAGTAGGTTTAGAGAGAAGAGAAAAGAAAGGTGTTTTGAGAAGAAAATTCGTTACACCGTGCGAAAAGAAGTTGCACTCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCTAATGCAGATGAAGTGGGCTCATCTTCACTTTTGTCTCAAACATTGGATCCTGGACAAGATGATGGCTTGTTGGAAACCTCATGTACACATTGTGGAACCAGTTCAAAATCTACTCCGATGATGCGTCGTGGGCCTGCTGGCCCTAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCCAATAAGGGAATTTTGAGGGATCTTTCCAAGGTTTCGAACTCGGGCGTTCAAGAACTCTCCGTGAAGGATACCGAACAGAGCGATGGCGAAGCTAATGAATCCGACGCTGCAGTTAGCTAA

Protein sequence

MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMNRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGEANESDAAVS

Homology

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BLAST of CmaCh19G004830 vs. Swiss-Prot
Match: GAT24_ARATH (GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 9.6e-54
Identity = 141/279 (50.54%), Postives = 175/279 (62.72%), Query Frame = 1


Query: 18  NGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMNR-VQDIVPSSYVSGSDYNP 77
           NG   +   QN +  + +D  +     +N  M     GGM+  V+  +PS   + +D   
Sbjct: 8   NGRMHIGVAQNPMHVQYEDHGLHHIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRG 67

Query: 78  LTGNGG---ADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPA-VGSVPVNQQ 137
              + G    DQLTLSF+G+VY FD VSP+KVQAVLLLLGG E+P  +P  +GS   N +
Sbjct: 68  EVVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNR 127

Query: 138 --GTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKA 197
             G +G P R   PQR ASL RFREKRK R F+K IRYTVRKEVALRMQRKKGQF S+K+
Sbjct: 128 VLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKS 187

Query: 198 NADEVGSS-----SLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNAC 257
           + D+ GS+     S  S  ++ G +    E  C HCGTS KSTPMMRRGP GPRTLCNAC
Sbjct: 188 SNDDSGSTGSDWGSNQSWAVE-GTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNAC 247

Query: 258 GLKWANKGILRDLSKVSNSGV-QELSVKDTEQSDGEANE 284
           GL WANKG LRDLSKV      Q LS+   E ++ EA++
Sbjct: 248 GLMWANKGTLRDLSKVPPPQTPQHLSLNKNEDANLEADQ 285

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BLAST of CmaCh19G004830 vs. Swiss-Prot
Match: GAT28_ARATH (GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-52
Identity = 132/241 (54.77%), Postives = 158/241 (65.56%), Query Frame = 1


Query: 53  DSGGMNR-VQDIVPSSYVSGSDYNPLTGNGGA---DQLTLSFRGEVYAFDSVSPDKVQAV 112
           ++GGM+  V+  +PS   + +D      + G+   DQLTLSF+G+VY FDSV P+KVQAV
Sbjct: 47  NAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAV 106

Query: 113 LLLLGGYEIPSGIP-AVGSVPVNQQGTN--GFPVRSVQPQRAASLSRFREKRKERCFEKK 172
           LLLLGG E+P   P  +GS   N + ++  G P R   PQR ASL RFREKRK R F+KK
Sbjct: 107 LLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKK 166

Query: 173 IRYTVRKEVALRMQRKKGQFISSKANADEV---GSSSLLSQTLDPGQDDGL-LETSCTHC 232
           IRYTVRKEVALRMQR KGQF S+K+N DE    GSS   +QT      +    E SC HC
Sbjct: 167 IRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHC 226

Query: 233 GTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGEA 283
           G   KSTPMMRRGPAGPRTLCNACGL WANKG  RDLSK S    Q L +   E ++ E 
Sbjct: 227 GIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLET 286

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BLAST of CmaCh19G004830 vs. Swiss-Prot
Match: GAT20_ORYSJ (GATA transcription factor 20 OS=Oryza sativa subsp. japonica GN=GATA20 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.7e-48
Identity = 129/260 (49.62%), Postives = 155/260 (59.62%), Query Frame = 1


Query: 32  DEGDDITVGEESM--DNPQMRFEDSGGMNRVQDIVPSSYVSGSDYNP----LTGNGG--- 91
           +E D++   EE M  D      E  GG    +  VP    + +  +P    L  +G    
Sbjct: 67  EEEDELEEEEEEMEEDEDAQHHEGVGG----EVAVPMDAEAAAQLDPHGGMLAASGAVQP 126

Query: 92  --ADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVR 151
             ++QLTLSF+GEVY FDSVSPDKVQAVLLLLGG E+  G+ +  S          FP  
Sbjct: 127 MASNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELNPGLGSGASSSAPYSKRLNFP-- 186

Query: 152 SVQPQRAASLSRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSL 211
                R ASL RFREKRKER F+KKIRY+VRKEVALRMQR +GQF SSK   DE  S   
Sbjct: 187 ----HRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKGDEATSELT 246

Query: 212 LSQTLDPGQDDGLLE------TSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGI 271
            S   D   + G +E        C HCG ++K+TPMMRRGP GPRTLCNACGL WANKG+
Sbjct: 247 AS---DGSPNWGSVEGRPPSAAECHHCGINAKATPMMRRGPDGPRTLCNACGLMWANKGM 306

Query: 272 LRDLSKVSNSGVQEL-SVKD 274
           LRDLSK   + +Q + SV D
Sbjct: 307 LRDLSKAPPTPIQVVASVND 313

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BLAST of CmaCh19G004830 vs. Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 1.9e-46
Identity = 114/205 (55.61%), Postives = 128/205 (62.44%), Query Frame = 1


Query: 82  GADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRS 141
           GA+QLT+SFRG+VY FD+V  DKV AVL LLGG    +  P V  +   Q   N  PV  
Sbjct: 80  GANQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQ---NHMPVVE 139

Query: 142 VQ-----PQRAASLSRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVG 201
            Q     PQRA SL RFR+KR  RCFEKK+RY VR+EVALRM R KGQF SSK       
Sbjct: 140 YQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYN 199

Query: 202 SSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILR 261
           S +      D  QDD   E SCTHCG SSK TPMMRRGP+GPRTLCNACGL WAN+G LR
Sbjct: 200 SGT----DQDSAQDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLR 259

Query: 262 DLSKVSNSGVQELSVKDTEQSDGEA 282
           DLSK +      L   D   S  +A
Sbjct: 260 DLSKKTEENQLALMKPDDGGSVADA 277

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BLAST of CmaCh19G004830 vs. Swiss-Prot
Match: GAT18_ORYSI (GATA transcription factor 18 OS=Oryza sativa subsp. indica GN=GATA18 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.8e-45
Identity = 121/257 (47.08%), Postives = 150/257 (58.37%), Query Frame = 1


Query: 32  DEGDDITVGEESMDNPQMRFEDSGGMNRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFR 91
           D+GDD T  +E  D+ +   E+        ++ P+   +  +       G  +QLTL F+
Sbjct: 35  DDGDDGTEEDEEEDDDEEGDEE--------ELPPAEDPAAPEPVSALLPGSPNQLTLLFQ 94

Query: 92  GEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPV----RSVQPQRA 151
           GEVY F+SV+P+KVQAVLLLLG  E+P G+     V  NQ+   G+        +  +R 
Sbjct: 95  GEVYVFESVTPEKVQAVLLLLGSCEMPPGL--ANMVLPNQRENRGYDDLLQRTDIPAKRV 154

Query: 152 ASLSRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVGSSSLLSQTLDP 211
           ASL RFREKRKER F+KKIRY VRKEVALRMQR+KGQF        E  S      +   
Sbjct: 155 ASLIRFREKRKERNFDKKIRYAVRKEVALRMQRRKGQFAGRANMEGESLSPGCELASQGS 214

Query: 212 GQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQ 271
           GQD    E+ C +CGTS K TP MRRGPAGPRTLCNACGL WANKG LR+  K       
Sbjct: 215 GQDFLSRESKCQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWANKGTLRNCPKAK----V 274

Query: 272 ELSVKDTEQSDGEANES 285
           E SV  TEQS+   + S
Sbjct: 275 ESSVVATEQSNAAVSPS 277

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BLAST of CmaCh19G004830 vs. TrEMBL
Match: A0A0A0K2L9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G064580 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 1.7e-134
Identity = 252/297 (84.85%), Postives = 270/297 (90.91%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120
               NRV+D+VPS+Y+SGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120

Query: 121 GYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKE 180
           GYEIPSGIPA+GS PVNQQG +GF VRSVQPQRAASLSRFREKRKERCFEKKIRY+VRKE
Sbjct: 121 GYEIPSGIPAIGSAPVNQQGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKE 180

Query: 181 VALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRR 240
           VALRMQRKKGQFISSKA  DEVGSSS+LSQTLD GQDDGLLETSCTHCGTSSKSTPMMRR
Sbjct: 181 VALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRR 240

Query: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGE-ANESDAAVS 290
           GPAGPRTLCNACGLKWANKGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

[Close]

BLAST of CmaCh19G004830 vs. TrEMBL
Match: W9SKI1_9ROSA (GATA transcription factor 28 OS=Morus notabilis GN=L484_014769 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 7.6e-98
Identity = 194/294 (65.99%), Postives = 236/294 (80.27%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGG-MNR 60
           MP+ N Q +MYG A +       +    +V D+ +D+T GEES+DNPQ+RF+D+   MN 
Sbjct: 1   MPEPNQQASMYGRAAM---ATTTNMQSGQVDDDDNDVTAGEESIDNPQIRFDDAAAAMNG 60

Query: 61  VQDIVPSS--YVSG-SDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYE 120
           +QD VPS+  YV G +DY P+  NGG+DQLTLSF+GEVY FD+VSPDKVQAVLLLLGGYE
Sbjct: 61  IQD-VPSNALYVPGVADYAPVAENGGSDQLTLSFQGEVYVFDAVSPDKVQAVLLLLGGYE 120

Query: 121 IPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKEVAL 180
           IPSGIPA+G+ P+ Q+G N F  + +QPQRAASL+RFREKRKERCF+KKIRY VRKEVA+
Sbjct: 121 IPSGIPAMGATPIGQRGMNQFVAKPIQPQRAASLNRFREKRKERCFDKKIRYNVRKEVAM 180

Query: 181 RMQRKKGQFISSKANADEVGS-SSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGP 240
           RMQRKKGQF S+K +++E+GS SS+ + T   GQD+ + ETSCTHCG SSKSTPMMRRGP
Sbjct: 181 RMQRKKGQFTSAKTSSEELGSASSVWNATPGSGQDENMQETSCTHCGISSKSTPMMRRGP 240

Query: 241 AGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGEANESDAAVS 290
           AGPRTLCNACGLKWANKGILRDLSKV N  VQ+ SVK+TEQSDG+AN+S A  +
Sbjct: 241 AGPRTLCNACGLKWANKGILRDLSKVLNGNVQDASVKETEQSDGDANDSAAVTT 290

[Close]

BLAST of CmaCh19G004830 vs. TrEMBL
Match: A0A061E2X9_THECC (Zim-like 2 OS=Theobroma cacao GN=TCM_007360 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92
Identity = 193/299 (64.55%), Postives = 230/299 (76.92%), Query Frame = 1


Query: 1   MPDSNFQD-AMYGSAVVNNGGRVLDSIQNRVGDEGDDITVG-----EESMDNPQMRFEDS 60
           M +SN Q  +MYGS  +N        +Q  + +E DD+  G     EES+DNPQ+ ++++
Sbjct: 1   MANSNHQPTSMYGSGAMN--------MQQNLEEEDDDVPGGTGGGGEESVDNPQIGYQET 60

Query: 61  GGM-----NRVQDIVPSS-YVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAV 120
           GG+     N +++   ++ Y  GSD   + GNGG+DQLTLSF+GEVY FDSVSPDKVQAV
Sbjct: 61  GGVVTVMNNGMEEASHANIYGQGSDLTVVPGNGGSDQLTLSFQGEVYVFDSVSPDKVQAV 120

Query: 121 LLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRY 180
           LLLLGGYEIPSGIPA+G+VPV Q+G   FP R++QPQRAASL+RFREKRKERCF+KKIRY
Sbjct: 121 LLLLGGYEIPSGIPALGTVPVTQRGLGDFPGRAIQPQRAASLNRFREKRKERCFDKKIRY 180

Query: 181 TVRKEVALRMQRKKGQFISSKANADEVGS-SSLLSQTLDPGQDDGLLETSCTHCGTSSKS 240
           TVRKEVALRMQRKKGQF SSKA +DEV S SS  S T   GQD+ + ETSCTHCG SSKS
Sbjct: 181 TVRKEVALRMQRKKGQFTSSKAISDEVASASSGWSVTPGSGQDESMEETSCTHCGISSKS 240

Query: 241 TPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGEANESDA 287
           TPMMRRGP GPRTLCNACGLKWANKG+LRDLSKVS   +Q+ S K TEQSD EAN+S+A
Sbjct: 241 TPMMRRGPTGPRTLCNACGLKWANKGVLRDLSKVSTIPIQDASAKPTEQSDAEANDSEA 291

[Close]

BLAST of CmaCh19G004830 vs. TrEMBL
Match: A0A0B0MJ71_GOSAR (GATA transcription factor 24-like protein OS=Gossypium arboreum GN=F383_19720 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.5e-90
Identity = 194/299 (64.88%), Postives = 222/299 (74.25%), Query Frame = 1


Query: 1   MPDSNFQD-AMYGSAVVNNGGRVLDSIQNRVGDEGDDITVG-----EESMDNPQMRFEDS 60
           M +SN Q  +MYGS   N    + +       +E DD+ VG     EES+DNPQ+ F+++
Sbjct: 1   MANSNHQPTSMYGSGAANMQRNIDE-------EEDDDVPVGAGGGGEESVDNPQIGFQEN 60

Query: 61  GG----MNRVQDIVPSSYV--SGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAV 120
           G     MN   D    ++V   GSD     GNGGADQLTLSF+GEVY FDSVSPDKVQAV
Sbjct: 61  GAVVAVMNNGMDEASHAHVYGQGSDSTSAPGNGGADQLTLSFQGEVYVFDSVSPDKVQAV 120

Query: 121 LLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRY 180
           LLLLGGYEIPSGIPA+G+V V Q+G N FP RS+QPQRAASL+RFREKRKERCFEKKIRY
Sbjct: 121 LLLLGGYEIPSGIPAMGTVSVTQRGLNDFPGRSIQPQRAASLNRFREKRKERCFEKKIRY 180

Query: 181 TVRKEVALRMQRKKGQFISSKANADEVGS-SSLLSQTLDPGQDDGLLETSCTHCGTSSKS 240
           TVRKEVALRMQRKKGQF SSKA ++EV S SS  S T   GQD+ + E  CTHCG SSK 
Sbjct: 181 TVRKEVALRMQRKKGQFTSSKAISEEVASASSGWSGTPGSGQDENMQEVLCTHCGISSKR 240

Query: 241 TPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGEANESDA 287
           TPMMRRGPAGPRTLCNACGLKWANKG+LRDLSKVS   + + +VK  EQSD EANES+A
Sbjct: 241 TPMMRRGPAGPRTLCNACGLKWANKGVLRDLSKVSTVVIPDPTVKTAEQSDAEANESEA 292

[Close]

BLAST of CmaCh19G004830 vs. TrEMBL
Match: A0A0D2PM93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G017800 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-89
Identity = 193/300 (64.33%), Postives = 220/300 (73.33%), Query Frame = 1


Query: 1   MPDSNFQDA-MYGSAVVNNGGRVLDSIQNRVGDEGDDITVG------EESMDNPQMRFED 60
           M +SN Q   MYGS   N        +Q  + +E DD   G      EES+DNPQ+ F++
Sbjct: 1   MANSNHQRTPMYGSGAAN--------MQRNIDEEEDDDVPGGAGGGGEESVDNPQIGFQE 60

Query: 61  SGG----MNRVQDIVPSSYV--SGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQA 120
           +G     MN   D    ++V   GSD     GNGGADQLTLSF+GEVY FDSVSPDKVQA
Sbjct: 61  NGAVVAVMNNGMDEASHAHVYGQGSDSTSAPGNGGADQLTLSFQGEVYVFDSVSPDKVQA 120

Query: 121 VLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIR 180
           VLLLLGGYEIPSGIPA+G+V V Q+G + FP RS+QPQRAASL+RFREKRKERCFEKKIR
Sbjct: 121 VLLLLGGYEIPSGIPAMGTVSVTQRGLSDFPGRSIQPQRAASLNRFREKRKERCFEKKIR 180

Query: 181 YTVRKEVALRMQRKKGQFISSKANADEVGS-SSLLSQTLDPGQDDGLLETSCTHCGTSSK 240
           YTVRKEVALRMQRKKGQF SSKA ++EV S SS  S T   GQD+ + E  CTHCG SSK
Sbjct: 181 YTVRKEVALRMQRKKGQFTSSKAISEEVASASSGWSGTPGSGQDENIQEVLCTHCGISSK 240

Query: 241 STPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGEANESDA 287
            TPMMRRGPAGPRTLCNACGLKWANKG+LRDLSKVS   + + +VK  EQSD EANES+A
Sbjct: 241 KTPMMRRGPAGPRTLCNACGLKWANKGVLRDLSKVSTVAIPDPTVKTAEQSDAEANESEA 292

[Close]

BLAST of CmaCh19G004830 vs. TAIR10
Match: AT3G21175.1 (AT3G21175.1 ZIM-like 1)

HSP 1 Score: 211.8 bits (538), Expect = 5.4e-55
Identity = 141/279 (50.54%), Postives = 175/279 (62.72%), Query Frame = 1


Query: 18  NGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMNR-VQDIVPSSYVSGSDYNP 77
           NG   +   QN +  + +D  +     +N  M     GGM+  V+  +PS   + +D   
Sbjct: 8   NGRMHIGVAQNPMHVQYEDHGLHHIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRG 67

Query: 78  LTGNGG---ADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPA-VGSVPVNQQ 137
              + G    DQLTLSF+G+VY FD VSP+KVQAVLLLLGG E+P  +P  +GS   N +
Sbjct: 68  EVVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNR 127

Query: 138 --GTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKA 197
             G +G P R   PQR ASL RFREKRK R F+K IRYTVRKEVALRMQRKKGQF S+K+
Sbjct: 128 VLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKS 187

Query: 198 NADEVGSS-----SLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNAC 257
           + D+ GS+     S  S  ++ G +    E  C HCGTS KSTPMMRRGP GPRTLCNAC
Sbjct: 188 SNDDSGSTGSDWGSNQSWAVE-GTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNAC 247

Query: 258 GLKWANKGILRDLSKVSNSGV-QELSVKDTEQSDGEANE 284
           GL WANKG LRDLSKV      Q LS+   E ++ EA++
Sbjct: 248 GLMWANKGTLRDLSKVPPPQTPQHLSLNKNEDANLEADQ 285

[Close]

BLAST of CmaCh19G004830 vs. TAIR10
Match: AT1G51600.1 (AT1G51600.1 ZIM-LIKE 2)

HSP 1 Score: 208.0 bits (528), Expect = 7.8e-54
Identity = 132/241 (54.77%), Postives = 158/241 (65.56%), Query Frame = 1


Query: 53  DSGGMNR-VQDIVPSSYVSGSDYNPLTGNGGA---DQLTLSFRGEVYAFDSVSPDKVQAV 112
           ++GGM+  V+  +PS   + +D      + G+   DQLTLSF+G+VY FDSV P+KVQAV
Sbjct: 47  NAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAV 106

Query: 113 LLLLGGYEIPSGIP-AVGSVPVNQQGTN--GFPVRSVQPQRAASLSRFREKRKERCFEKK 172
           LLLLGG E+P   P  +GS   N + ++  G P R   PQR ASL RFREKRK R F+KK
Sbjct: 107 LLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKK 166

Query: 173 IRYTVRKEVALRMQRKKGQFISSKANADEV---GSSSLLSQTLDPGQDDGL-LETSCTHC 232
           IRYTVRKEVALRMQR KGQF S+K+N DE    GSS   +QT      +    E SC HC
Sbjct: 167 IRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHC 226

Query: 233 GTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGEA 283
           G   KSTPMMRRGPAGPRTLCNACGL WANKG  RDLSK S    Q L +   E ++ E 
Sbjct: 227 GIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLET 286

[Close]

BLAST of CmaCh19G004830 vs. TAIR10
Match: AT4G24470.3 (AT4G24470.3 GATA-type zinc finger protein with TIFY domain)

HSP 1 Score: 189.5 bits (480), Expect = 2.9e-48
Identity = 110/184 (59.78%), Postives = 122/184 (66.30%), Query Frame = 1


Query: 82  GADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPAVGSVPVNQQGTNGFPVRS 141
           GA+QLT+SFRG+VY FD+V  DKV AVL LLGG    +  P V  +   Q   N  PV  
Sbjct: 80  GANQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQ---NHMPVVE 139

Query: 142 VQ-----PQRAASLSRFREKRKERCFEKKIRYTVRKEVALRMQRKKGQFISSKANADEVG 201
            Q     PQRA SL RFR+KR  RCFEKK+RY VR+EVALRM R KGQF SSK       
Sbjct: 140 YQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYN 199

Query: 202 SSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILR 261
           S +      D  QDD   E SCTHCG SSK TPMMRRGP+GPRTLCNACGL WAN+G LR
Sbjct: 200 SGT----DQDSAQDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLR 256

[Close]

BLAST of CmaCh19G004830 vs. TAIR10
Match: AT1G08000.1 (AT1G08000.1 GATA transcription factor 10)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 1


Query: 202 SQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKV 261
           S TL+  + DG++   CTHC T +  TP  R+GP+GP+TLCNACG+++ +  ++ +    
Sbjct: 205 SSTLESSKSDGIVRI-CTHCETIT--TPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPA 263

Query: 262 SN 264
           S+
Sbjct: 265 SS 263

[Close]

BLAST of CmaCh19G004830 vs. TAIR10
Match: AT1G08010.1 (AT1G08010.1 GATA transcription factor 11)

HSP 1 Score: 53.1 bits (126), Expect = 3.2e-07
Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 1


Query: 201 LSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRD--- 260
           +S TL+    DG++   CTHC T+   TP  R GP+GP+TLCNACG+++ +  ++ +   
Sbjct: 206 VSSTLEASNSDGIVR-KCTHCETTK--TPQWREGPSGPKTLCNACGVRFRSGRLVPEYRP 265

Query: 261 ---------LSKVSNSGVQELSVKDTEQSD 279
                    +   S+  + E+  KD EQ D
Sbjct: 266 ASSPTFIPAVHSNSHRKIIEMRRKDDEQFD 292

[Close]

BLAST of CmaCh19G004830 vs. NCBI nr
Match: gi|659110314|ref|XP_008455162.1| (PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo])

HSP 1 Score: 493.0 bits (1268), Expect = 3.5e-136
Identity = 256/297 (86.20%), Postives = 273/297 (91.92%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMN-- 60
           MPDSNFQDAMYGS V+N+GGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM+  
Sbjct: 1   MPDSNFQDAMYGSGVMNDGGRDLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  -----RVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120
                RV+D+VPS+YVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG
Sbjct: 61  VSVISRVEDVVPSTYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120

Query: 121 GYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKE 180
           GYEIPSGIPA+GSVPVNQQG +GFPVRSVQPQRAASLSRFREKRKERCFEKKIRY+VRKE
Sbjct: 121 GYEIPSGIPAIGSVPVNQQGADGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKE 180

Query: 181 VALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRR 240
           VALRMQRKKGQFISSKA  DEVGSSS+LSQTLD GQDDGLLETSCTHCGTSSKSTPMMRR
Sbjct: 181 VALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRR 240

Query: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGE-ANESDAAVS 290
           GPAGPRTLCNACGLKWANKGILRDLSKVSN  +QE S K+ EQSDGE ANES+AA++
Sbjct: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNPSIQEPSAKEIEQSDGEAANESNAAIN 297

[Close]

BLAST of CmaCh19G004830 vs. NCBI nr
Match: gi|659110318|ref|XP_008455164.1| (PREDICTED: GATA transcription factor 24-like isoform X2 [Cucumis melo])

HSP 1 Score: 493.0 bits (1268), Expect = 3.5e-136
Identity = 256/297 (86.20%), Postives = 273/297 (91.92%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGMN-- 60
           MPDSNFQDAMYGS V+N+GGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM+  
Sbjct: 1   MPDSNFQDAMYGSGVMNDGGRDLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  -----RVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120
                RV+D+VPS+YVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG
Sbjct: 61  VSVISRVEDVVPSTYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120

Query: 121 GYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKE 180
           GYEIPSGIPA+GSVPVNQQG +GFPVRSVQPQRAASLSRFREKRKERCFEKKIRY+VRKE
Sbjct: 121 GYEIPSGIPAIGSVPVNQQGADGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKE 180

Query: 181 VALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRR 240
           VALRMQRKKGQFISSKA  DEVGSSS+LSQTLD GQDDGLLETSCTHCGTSSKSTPMMRR
Sbjct: 181 VALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRR 240

Query: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGE-ANESDAAVS 290
           GPAGPRTLCNACGLKWANKGILRDLSKVSN  +QE S K+ EQSDGE ANES+AA++
Sbjct: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNPSIQEPSAKEIEQSDGEAANESNAAIN 297

[Close]

BLAST of CmaCh19G004830 vs. NCBI nr
Match: gi|449438218|ref|XP_004136886.1| (PREDICTED: GATA transcription factor 24 isoform X1 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.5e-134
Identity = 252/297 (84.85%), Postives = 270/297 (90.91%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120
               NRV+D+VPS+Y+SGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120

Query: 121 GYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKE 180
           GYEIPSGIPA+GS PVNQQG +GF VRSVQPQRAASLSRFREKRKERCFEKKIRY+VRKE
Sbjct: 121 GYEIPSGIPAIGSAPVNQQGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKE 180

Query: 181 VALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRR 240
           VALRMQRKKGQFISSKA  DEVGSSS+LSQTLD GQDDGLLETSCTHCGTSSKSTPMMRR
Sbjct: 181 VALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRR 240

Query: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGE-ANESDAAVS 290
           GPAGPRTLCNACGLKWANKGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

[Close]

BLAST of CmaCh19G004830 vs. NCBI nr
Match: gi|778724486|ref|XP_011658814.1| (PREDICTED: GATA transcription factor 24 isoform X2 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.5e-134
Identity = 252/297 (84.85%), Postives = 270/297 (90.91%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120
               NRV+D+VPS+Y+SGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120

Query: 121 GYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKE 180
           GYEIPSGIPA+GS PVNQQG +GF VRSVQPQRAASLSRFREKRKERCFEKKIRY+VRKE
Sbjct: 121 GYEIPSGIPAIGSAPVNQQGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKE 180

Query: 181 VALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRR 240
           VALRMQRKKGQFISSKA  DEVGSSS+LSQTLD GQDDGLLETSCTHCGTSSKSTPMMRR
Sbjct: 181 VALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRR 240

Query: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGE-ANESDAAVS 290
           GPAGPRTLCNACGLKWANKGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

[Close]

BLAST of CmaCh19G004830 vs. NCBI nr
Match: gi|700188515|gb|KGN43748.1| (hypothetical protein Csa_7G064580 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.5e-134
Identity = 252/297 (84.85%), Postives = 270/297 (90.91%), Query Frame = 1


Query: 1   MPDSNFQDAMYGSAVVNNGGRVLDSIQNRVGDEGDDITVGEESMDNPQMRFEDSGGM--- 60
           MPDSNF+DAMYGS V++NGGR L +IQNRV DE DDI  GEES+DNPQMRFEDSGGM   
Sbjct: 1   MPDSNFEDAMYGSGVMDNGGRGLGNIQNRVDDEDDDINGGEESIDNPQMRFEDSGGMSGS 60

Query: 61  ----NRVQDIVPSSYVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120
               NRV+D+VPS+Y+SGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG
Sbjct: 61  VSVINRVEDVVPSTYISGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLG 120

Query: 121 GYEIPSGIPAVGSVPVNQQGTNGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYTVRKE 180
           GYEIPSGIPA+GS PVNQQG +GF VRSVQPQRAASLSRFREKRKERCFEKKIRY+VRKE
Sbjct: 121 GYEIPSGIPAIGSAPVNQQGADGFTVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKE 180

Query: 181 VALRMQRKKGQFISSKANADEVGSSSLLSQTLDPGQDDGLLETSCTHCGTSSKSTPMMRR 240
           VALRMQRKKGQFISSKA  DEVGSSS+LSQTLD GQDDGLLETSCTHCGTSSKSTPMMRR
Sbjct: 181 VALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRR 240

Query: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNSGVQELSVKDTEQSDGE-ANESDAAVS 290
           GPAGPRTLCNACGLKWANKGILRDLSKVSN  +QE S K+ EQSDGE ANE +AA++
Sbjct: 241 GPAGPRTLCNACGLKWANKGILRDLSKVSNPSIQEPSAKEIEQSDGEAANEHNAAIN 297

The following BLAST results are available for this feature:

BLAST of CmaCh19G004830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GAT24_ARATH	9.6e-54	50.54	GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2 SV=2	[more]
GAT28_ARATH	1.4e-52	54.77	GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2 SV=1	[more]
GAT20_ORYSJ	2.7e-48	49.62	GATA transcription factor 20 OS=Oryza sativa subsp. japonica GN=GATA20 PE=2 SV=1	[more]
GAT25_ARATH	1.9e-46	55.61	GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2 SV=2	[more]
GAT18_ORYSI	2.8e-45	47.08	GATA transcription factor 18 OS=Oryza sativa subsp. indica GN=GATA18 PE=3 SV=1	[more]

BLAST of CmaCh19G004830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2L9_CUCSA	1.7e-134	84.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G064580 PE=4 SV=1	[more]
W9SKI1_9ROSA	7.6e-98	65.99	GATA transcription factor 28 OS=Morus notabilis GN=L484_014769 PE=4 SV=1	[more]
A0A061E2X9_THECC	1.6e-92	64.55	Zim-like 2 OS=Theobroma cacao GN=TCM_007360 PE=4 SV=1	[more]
A0A0B0MJ71_GOSAR	4.5e-90	64.88	GATA transcription factor 24-like protein OS=Gossypium arboreum GN=F383_19720 PE...	[more]
A0A0D2PM93_GOSRA	1.3e-89	64.33	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G017800 PE=4 SV=1	[more]

BLAST of CmaCh19G004830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21175.1	5.4e-55	50.54	ZIM-like 1	[more]
AT1G51600.1	7.8e-54	54.77	ZIM-LIKE 2	[more]
AT4G24470.3	2.9e-48	59.78	GATA-type zinc finger protein with TIFY domain	[more]
AT1G08000.1	1.9e-07	40.32	GATA transcription factor 10	[more]
AT1G08010.1	3.2e-07	34.44	GATA transcription factor 11	[more]

BLAST of CmaCh19G004830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110314\|ref\|XP_008455162.1\|	3.5e-136	86.20	PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo]	[more]
gi\|659110318\|ref\|XP_008455164.1\|	3.5e-136	86.20	PREDICTED: GATA transcription factor 24-like isoform X2 [Cucumis melo]	[more]
gi\|449438218\|ref\|XP_004136886.1\|	2.5e-134	84.85	PREDICTED: GATA transcription factor 24 isoform X1 [Cucumis sativus]	[more]
gi\|778724486\|ref\|XP_011658814.1\|	2.5e-134	84.85	PREDICTED: GATA transcription factor 24 isoform X2 [Cucumis sativus]	[more]
gi\|700188515\|gb\|KGN43748.1\|	2.5e-134	84.85	hypothetical protein Csa_7G064580 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000679	Znf_GATA
IPR010399	Tify_dom
IPR010402	CCT_domain
IPR013088	Znf_NHR/GATA

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0008270	zinc ion binding
GO:0043565	sequence-specific DNA binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004830.1	CmaCh19G004830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 218..253 score: 9.0
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 212..265 score: 2.7
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 218..245 scor
IPR000679	Zinc finger, GATA-type	PROFILE	PS50114	GATA_ZN_FINGER_2	coord: 217..269 score: 9
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 83..113 score: 1.1
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 79..114 score: 5.
IPR010399	Tify domain	PROFILE	PS51320	TIFY	coord: 79..114 score: 13
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 146..188 score: 3.2
IPR010402	CCT domain	PROFILE	PS51017	CCT	coord: 146..188 score: 13
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	G3DSA:3.30.50.10		coord: 216..259 score: 7.5
None	No IPR available	PANTHER	PTHR10071	TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR	coord: 14..264 score: 3.3E
None	No IPR available	PANTHER	PTHR10071:SF186	SUBFAMILY NOT NAMED	coord: 14..264 score: 3.3E
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 215..264 score: 3.61

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G004830	Cucsa.218190	Cucumber (Gy14) v1	cgycmaB0626
CmaCh19G004830	Cla012926	Watermelon (97103) v1	cmawmB473
CmaCh19G004830	Csa7G064580	Cucumber (Chinese Long) v2	cmacuB535
CmaCh19G004830	MELO3C018614	Melon (DHL92) v3.5.1	cmameB457
CmaCh19G004830	ClCG09G016150	Watermelon (Charleston Gray)	cmawcgB442
CmaCh19G004830	CSPI07G05820	Wild cucumber (PI 183967)	cmacpiB540
CmaCh19G004830	CmoCh19G005010	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G004830	CmoCh11G014550	Cucurbita moschata (Rifu)	cmacmoB494
CmaCh19G004830	Lsi03G006960	Bottle gourd (USVL1VR-Ls)	cmalsiB484
CmaCh19G004830	Cp4.1LG15g03820	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G004830	Cp4.1LG04g07180	Cucurbita pepo (Zucchini)	cmacpeB539
CmaCh19G004830	MELO3C018614.2	Melon (DHL92) v3.6.1	cmamedB530
CmaCh19G004830	CsaV3_7G006810	Cucumber (Chinese Long) v3	cmacucB0644
CmaCh19G004830	Cla97C09G177940	Watermelon (97103) v2	cmawmbB550
CmaCh19G004830	Bhi05G000761	Wax gourd	cmawgoB0661
CmaCh19G004830	CsGy7G005510	Cucumber (Gy14) v2	cgybcmaB951
CmaCh19G004830	Carg23065	Silver-seed gourd	carcmaB1026
CmaCh19G004830	Carg22805	Silver-seed gourd	carcmaB0401

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G004830	CmaCh11G016740	Cucurbita maxima (Rimu)	cmacmaB149

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G004830	Bottle gourd (USVL1VR-Ls)	cmalsiB483
CmaCh19G004830	Cucumber (Gy14) v2	cgybcmaB945
CmaCh19G004830	Melon (DHL92) v3.6.1	cmamedB535
CmaCh19G004830	Melon (DHL92) v3.6.1	cmamedB562
CmaCh19G004830	Silver-seed gourd	carcmaB0528
CmaCh19G004830	Cucumber (Chinese Long) v3	cmacucB0639
CmaCh19G004830	Watermelon (97103) v2	cmawmbB524
CmaCh19G004830	Wax gourd	cmawgoB0634
CmaCh19G004830	Wax gourd	cmawgoB0642
CmaCh19G004830	Cucurbita maxima (Rimu)	cmacmaB342
CmaCh19G004830	Cucumber (Gy14) v1	cgycmaB0624
CmaCh19G004830	Cucurbita moschata (Rifu)	cmacmoB530
CmaCh19G004830	Wild cucumber (PI 183967)	cmacpiB534
CmaCh19G004830	Cucumber (Chinese Long) v2	cmacuB528
CmaCh19G004830	Melon (DHL92) v3.5.1	cmameB463
CmaCh19G004830	Watermelon (Charleston Gray)	cmawcgB454