Cp4.1LG15g02030 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g02030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger family protein
LocationCp4.1LG15 : 1698361 .. 1701580 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATAGTGGGGGAAACGTAGTCCATGTGATCCCCGGGATGAGTAGCGAGAATTGGCCCGGTGAAGTTTGGGCTACCGAAGAAGAATACAGAGCTTGGAACAATGGCGGTGGTGATGGTTCCATTGATACGCCTTCTAATTCGAGTTATGATCAAAGACAATCCCAAAGCCGATCCGGAAGCGAACCCCCAAACAAGAAATCGAGAAGCTCACAGGATGTTACGTCTTCCAATCGATCAAAAGCGATTGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTTCGTGCTGGAACCTGCCCTTACATCACCAATTGCAATTTCGCTCATAGCATTGAGGAGCTCCGGCGGCCACCACATAATTGGCAGGTATTAGAATTGGTTCTTAGTTAGTATTTTGTGTTAGGAATCACGACCCTCCACACAATAGTATGATATTTAGTATGATATTGTCCACACAATAGTATGATATTTAGTATGATATTGTCTGCTTTGAGCTAGAGCCTACTCTTAGGTCTATGTAGCCGTTCGACACGTAAGTCACTTTTGATTACATCTTCCAAGCAAGCAGTTGCTTAGTTAGGATTCTCGATATGACACTCTGATACTATGTTAGGAATCATAACACTCCACCATGAGCATTGCTTTGGGCTTTCCAAAAGGCCTCATACAATAGAGATGTATTTCTTACTTATGAACTCATGATCATTAGCCAACGTGGGACTTCCTCCTGACCGTGGTCAACATTTTGTTTGGTTTAATTTTTAGAATATCAAGAGTTCCTAATTGCAATGAGTGTTGTTAGCAGGAAATTGTGGCGGCACATGAAGAAGAGAAGGTATTTTCAGAGCCAAGGGAGGAATTTCAGATACCTTCACTTGGGACATCAAATTTTGGTTCAGAGTCGCAGAGGTCATATAAAGGAAGACATTGCAAGAAGTTTTACACAGAGGAGGGCTGTCCATATGGGGATAGTTGTACGTTTCTTCATGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGACCTGGTGGCTACAGTGGCGGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGGTGGTGGTTCAGGAAATGGATCCAACAGTAAGCCTTCGAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGCCCATTTGGAAGCAAATGCCATTTTGCTCATGGAGCTGCTGGTATGTTTCTTCTATTATCAATCCTTGTGTTAATGACATAGCTCATTCTTTGCTTTGGGTTTAGGACTCCACCATGAACGTGCTAGAAACTTCTTAAATGTGGAACTTGAATGACACTATAATACTTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTACCAGACGCGTTTTCAAAAACCTTGAGGGAAAATCCGAAAGGGAAAACCCAAAGAGGGCAGTATCTGCTAGTAGTGGTCTTAGGCTGTTACAAATGATATCAAAGCCAGACACCAAACGGTGTGTGTCCTGAAAGGGGGTGGACATTGGGCGATGTGCCAGTGAGGACGCTGGCCCCATGGGGGGGGCGAGTGGATTGTGAGATTCCACATTGGTTGGAGAGGGGAACGAAGCATTCTTTACAAGGGTGTGGAAACTCTTCTTAGCGGACGCGTTTTAAGAACCTTAGGGGAAGCCCGAGAGGAAAGCCCAAAGAGGACAATATCTGTTAGTGGTAGGCTTGGGTTATTTTGTATCAAAGCCAGACACCGGGCCATGTGCCAGTGAGGAGGCTGAGCTCCAAAGGGGGGTGCACACCAGGCAGTGTGCCCGCGAGTACGTTGGGTCCCAAAGGAGATGAATTGGGGGGTATTACATCGATTGGAGAGAGGAACGAGTGTCAGCGAGAATGCTGGCCCAAAAGGGGGTAGGTTGTGGAGATCCTACACCGGTTGGAGAGCGGAATGAAGCATATTCTTTATAAGGGTGTGGAAATCTCTCCCTACCAAACGCGTTTTAAAAACCTCGAGGGAAAATCCAAAAGGGAAGTTTATATGGACGAAGTGTATAAGTCTCGATCAACATGGTTATGCCATATGCTGATTTGTTGTCATTCTCATGCACATCTAACAATGCTTCCATTTTTTCCCATGATGTTTCGTGCTTTTGTTTCTTTGAATTACTGATATTTATCTGAACGTCGATATAGCCATATGGACCGAGTTGGTTACTTGATTAGACCGATAAACATACGAACATTGTCGTGTCCCGTTGAACGAGCTGTTTAGTTTGTGGTTTAGATTTAATACTTTGAATTAACCACAGAATTACACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCAGCTCCTCCTGACCTGAAGCAGGGTGTATTGCCTAAAGCTCCTGGCGATACTCTGGTTGCTTCTGTTCCTTCACTACCTCATTCAGATGTTTATCATATTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAGAGGTCGGGTCAGCGAACTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTCGGATATATGGTGACTGGATTGACGACATCGAATAATATCATATCCAAGAAATCGTTGAACGTGAATAATGATCATCATGATGGACTTGGTCTCTTGTAAACCTTTGGCAGATGAAGATTCTGTTTGTTCGGGTTAAGTTTCGGTTGGTTCTTTTCGTATTCTCGTTCCTAACCCGCTTCACGTCCGATCTATGGTCTTTATCTGTTAGTGTTGTTGTTTATGTAGTTACTATATGTAATCCTTTTCATTGAAAGAAGAGAGAAATGTATGATTTTCACCACCTTCTCAGTTCATCATTGAGTAATTCTTCTGTGTTGTGTTATGGGAAGTCTTCAATCTTAATGTAATGGGGAACAAGAGAGGCAGCGGATGAGTGTCATGGTTATGCTTGTCTAAGACGTGTTGTCTATGAGCGTATGTCCGTTTCAAACCTCTTTTTACTTAGGTTAGATAGGTCTACTATTATTGGTGTCATTATGGAGTATATGACCGCTCACTAAAATCATGTCTACACCCGACATGACTAAAATGCCCCAAAATGTATTATAGGTGATATGACTAGTTGTCTCTTCCTCCTACTCCGGTTATATGCTATCAAAGCCGTTGTTGTTGTCTAATTGCTTTTAGCTTATAATATATATAT

mRNA sequence

ATGGATTATAGTGGGGGAAACGTAGTCCATGTGATCCCCGGGATGAGTAGCGAGAATTGGCCCGGTGAAGTTTGGGCTACCGAAGAAGAATACAGAGCTTGGAACAATGGCGGTGGTGATGGTTCCATTGATACGCCTTCTAATTCGAGTTATGATCAAAGACAATCCCAAAGCCGATCCGGAAGCGAACCCCCAAACAAGAAATCGAGAAGCTCACAGGATGAAATTGTGGCGGCACATGAAGAAGAGAAGGTATTTTCAGAGCCAAGGGAGGAATTTCAGATACCTTCACTTGGGACATCAAATTTTGGTTCAGAGTCGCAGAGGTCATATAAAGGAAGACATTGCAAGAAGTTTTACACAGAGGAGGGCTGTCCATATGGGGATAGTTGTACGTTTCTTCATGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGACCTGGTGGCTACAGTGGCGGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGGTGGTGGTTCAGGAAATGGATCCAACAGTAAGCCTTCGAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGCCCATTTGGAAGCAAATGCCATTTTGCTCATGGAGCTGCTGAATTACACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCAGCTCCTCCTGACCTGAAGCAGGGTGTATTGCCTAAAGCTCCTGGCGATACTCTGGTTGCTTCTGTTCCTTCACTACCTCATTCAGATGTTTATCATATTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAGAGGTCGGGTCAGCGAACTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTCGGATATATGGTGACTGGATTGACGACATCGAATAATATCATATCCAAGAAATCGTTGAACGTGAATAATGATCATCATGATGGACTTGGTCTCTTGTAAACCTTTGGCAGATGAAGATTCTGTTTGTTCGGGTTAAGTTTCGGTTGGTTCTTTTCGTATTCTCGTTCCTAACCCGCTTCACGTCCGATCTATGGTCTTTATCTGTTAGTGTTGTTGTTTATGTAGTTACTATATGTAATCCTTTTCATTGAAAGAAGAGAGAAATGTATGATTTTCACCACCTTCTCAGTTCATCATTGAGTAATTCTTCTGTGTTGTGTTATGGGAAGTCTTCAATCTTAATGTAATGGGGAACAAGAGAGGCAGCGGATGAGTGTCATGGTTATGCTTGTCTAAGACGTGTTGTCTATGAGCGTATGTCCGTTTCAAACCTCTTTTTACTTAGGTTAGATAGGTCTACTATTATTGGTGTCATTATGGAGTATATGACCGCTCACTAAAATCATGTCTACACCCGACATGACTAAAATGCCCCAAAATGTATTATAGGTGATATGACTAGTTGTCTCTTCCTCCTACTCCGGTTATATGCTATCAAAGCCGTTGTTGTTGTCTAATTGCTTTTAGCTTATAATATATATAT

Coding sequence (CDS)

ATGGATTATAGTGGGGGAAACGTAGTCCATGTGATCCCCGGGATGAGTAGCGAGAATTGGCCCGGTGAAGTTTGGGCTACCGAAGAAGAATACAGAGCTTGGAACAATGGCGGTGGTGATGGTTCCATTGATACGCCTTCTAATTCGAGTTATGATCAAAGACAATCCCAAAGCCGATCCGGAAGCGAACCCCCAAACAAGAAATCGAGAAGCTCACAGGATGAAATTGTGGCGGCACATGAAGAAGAGAAGGTATTTTCAGAGCCAAGGGAGGAATTTCAGATACCTTCACTTGGGACATCAAATTTTGGTTCAGAGTCGCAGAGGTCATATAAAGGAAGACATTGCAAGAAGTTTTACACAGAGGAGGGCTGTCCATATGGGGATAGTTGTACGTTTCTTCATGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGACCTGGTGGCTACAGTGGCGGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGGTGGTGGTTCAGGAAATGGATCCAACAGTAAGCCTTCGAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGCCCATTTGGAAGCAAATGCCATTTTGCTCATGGAGCTGCTGAATTACACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCAGCTCCTCCTGACCTGAAGCAGGGTGTATTGCCTAAAGCTCCTGGCGATACTCTGGTTGCTTCTGTTCCTTCACTACCTCATTCAGATGTTTATCATATTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAGAGGTCGGGTCAGCGAACTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTCGGATATATGGTGACTGGATTGACGACATCGAATAA

Protein sequence

MDYSGGNVVHVIPGMSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDEIVAAHEEEKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE
Homology
[Close]
BLAST of Cp4.1LG15g02030 vs. Swiss-Prot
Match: C3H12_ARATH (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77
Identity = 170/269 (63.20%), Postives = 187/269 (69.52%), Query Frame = 1 

Query: 64  PPNKKSRSSQDEIVAAHEEEK----------VFSEPREEFQIPSLGTSNFGSESQRSYKG 123
           PPN +      EIVAAHEEE+          V   PREEFQIPSL +S   +ES RS+KG
Sbjct: 124 PPNWQ------EIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESGRSFKG 183

Query: 124 RHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGG--------- 183
           RHCKKFYTEEGCPYG+SCTFLHDE S+NRESVAISLGPGGY  GGGGG GG         
Sbjct: 184 RHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSS 243

Query: 184 ------GGGGGSGNGSN---SKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGG 243
                 GGGGGSG+GS     KPSNWKTRICNKWE+TGYCPFG+KCHFAHGAAELHR+GG
Sbjct: 244 SNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGG 303

Query: 244 GLMETETRDSSSAPPDLKQGVL-PKAPGDTLVASVPSLPHS--DVYHIVVPSQR-STIVI 301
           GL+E E +D  S  PD KQ V  PK   DT     P +PH+    YH  V  QR S+ V 
Sbjct: 304 GLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVT 363

[Close]
BLAST of Cp4.1LG15g02030 vs. Swiss-Prot
Match: C3H56_ORYSJ (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-72
Identity = 179/376 (47.61%), Postives = 221/376 (58.78%), Query Frame = 1 

Query: 1   MDYSGGNVVHVIP---------GMSSENWPGEVWATEEEY-------------------- 60
           MDY+  N +H+IP           +++     +WATE++Y                    
Sbjct: 1   MDYT--NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGGGGSSRAGSEQ 60

Query: 61  -----RAWNNGGGDGSIDTPSNSSYDQRQ------SQSRSGSEP------------PNKK 120
                ++   GGG+G  +T  + +  +         + R+G+ P              +K
Sbjct: 61  PPPGKKSRGGGGGEGGGNTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRK 120

Query: 121 SRSSQDEIVAAHEEEKVFSEPREEFQIPSLGTSN------------FGSESQRSYKGRHC 180
              +  EIVAAHEE    +E REE QIP + +S              G  S R+YKGRHC
Sbjct: 121 PPPNWQEIVAAHEEA---TEAREEHQIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHC 180

Query: 181 KKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGG---------GGG 240
           KKFYT+EGCPYGD+CTFLHDEQSK RESVAISL P   S GGGGGGG             
Sbjct: 181 KKFYTDEGCPYGDACTFLHDEQSKARESVAISLSP---SVGGGGGGGSYNSAAAAAASAS 240

Query: 241 GGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSS 300
             +GNG   KPSNWKTRICNKWE+TGYCPFGSKCHFAHGAAELH+YGGGL++ ++RD ++
Sbjct: 241 AAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRD-AA 300

[Close]
BLAST of Cp4.1LG15g02030 vs. Swiss-Prot
Match: C3H28_ARATH (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g35430 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.0e-34
Identity = 111/300 (37.00%), Postives = 136/300 (45.33%), Query Frame = 1 

Query: 24  VWATEEEY-RAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDEIVAAHEE 83
           VWATE++Y R W                     + +  G+E P+KK+RSS          
Sbjct: 34  VWATEDDYSRVW---------------------AINSDGAESPSKKTRSSSSS------- 93

Query: 84  EKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG-DSCTFLHD----- 143
                          +G S F        K + C KF     CPY   SC F H      
Sbjct: 94  --------------EIGKSFF--------KTKLCFKFRAGT-CPYSASSCHFAHSAEELR 153

Query: 144 --------------EQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGSGNGSNSKPSNWK 203
                         E S+NRES A+SLGP G                       K  NWK
Sbjct: 154 LPPPPPPNWQETVTEASRNRESFAVSLGPRG-----------------NVAQTLKSPNWK 213

Query: 204 TRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPG 263
           TRICNKW+ TGYCPFGS CHFAHG +ELH +GGGL+E E +  +SA  D KQ    +   
Sbjct: 214 TRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQ----RGQV 252

Query: 264 DTLVASVPSLPHSDVYHIVVPSQR--STIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           DT+ + V            V SQR  S +  + +G RT +KWKGPDKISR+YGDWIDDIE
Sbjct: 274 DTVTSLVSP---------GVSSQRTSSAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

[Close]
BLAST of Cp4.1LG15g02030 vs. Swiss-Prot
Match: C3H39_ARATH (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.1e-15
Identity = 76/235 (32.34%), Postives = 108/235 (45.96%), Query Frame = 1 

Query: 81  EEEKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSK 140
           E E+     RE   +  +  +N+  + +   + + C+KF   E CPYGD C F+H++ SK
Sbjct: 154 ERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSK 213

Query: 141 NRE-------SVAISLGPGGYSGGGGGG---------GGGGGGGGSGNGSNSKPSNWKTR 200
            RE       S  IS+G                    G         NG   K   WKTR
Sbjct: 214 FREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTR 273

Query: 201 ICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDT 260
           +C K+++TG CPFG KCHFAHG AELH    G +E E  ++ ++    KQ V+   P + 
Sbjct: 274 LCMKFDITGQCPFGDKCHFAHGQAELHN-SVGRVEGEAMNAVASVN--KQAVV---PANE 333

Query: 261 LVASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDI 300
             A  P           V +  S +  +   ++   KW    KI+RIYGDWIDD+
Sbjct: 334 AFAMKPITQ--------VTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374

[Close]
BLAST of Cp4.1LG15g02030 vs. Swiss-Prot
Match: C3H39_ORYSJ (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.0e-06
Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 1 

Query: 181 WKTRICNKWELTGYCPFGSKCHFAHGAAEL 211
           +KT +CNKWE TG CP+G +C FAHG AEL
Sbjct: 269 FKTELCNKWEETGACPYGDQCQFAHGVAEL 298

[Close]
BLAST of Cp4.1LG15g02030 vs. TrEMBL
Match: A0A0A0LK26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901160 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.6e-120
Identity = 219/228 (96.05%), Postives = 223/228 (97.81%), Query Frame = 1 

Query: 75  EIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF 134
           EIVAAHEEEK V SEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF
Sbjct: 125 EIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF 184

Query: 135 LHDEQSKNRESVAISLGPGGYSGGGGGGGG-GGGGGGSGNGSNSKPSNWKTRICNKWELT 194
           LHDEQSKNRESVAISLGPGGYSGGGGGGGG GGGGGGSGNGSN+KPSNWKTRICNKWELT
Sbjct: 185 LHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWELT 244

Query: 195 GYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSL 254
           GYCPFG+KCHFAHGAAELHRYGGGLMETETRDSS+APPDLKQGVLPKAPGDTLVASVPS 
Sbjct: 245 GYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLPKAPGDTLVASVPSA 304

Query: 255 PHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           PHSDVYH+VVPSQRSTIVIQR GQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 305 PHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 352

[Close]
BLAST of Cp4.1LG15g02030 vs. TrEMBL
Match: W9R214_9ROSA (Zinc finger CCCH domain-containing protein 56 OS=Morus notabilis GN=L484_001869 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103
Identity = 197/243 (81.07%), Postives = 213/243 (87.65%), Query Frame = 1 

Query: 67  KKSRSSQDEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGC 126
           ++  ++  EIVAAHEEE+ V SEPREEFQIPS+G+S+F  E+QRSYKGRHCKKFYTEEGC
Sbjct: 119 RRPPANWQEIVAAHEEERAVSSEPREEFQIPSVGSSSFVVETQRSYKGRHCKKFYTEEGC 178

Query: 127 PYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGSGNG------SNSKPS 186
           PYGD+CTFLHDEQSKNRESVAISLGPGGY GGGGGGGGGGGGGG G G      SNSKPS
Sbjct: 179 PYGDNCTFLHDEQSKNRESVAISLGPGGYGGGGGGGGGGGGGGGGGGGTPSGANSNSKPS 238

Query: 187 NWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQ--GVL 246
           NWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGL+ETE RDSSS P + K   GV 
Sbjct: 239 NWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLVETEARDSSSVPAESKPPGGVP 298

Query: 247 PKAPGDTLVASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWID 301
           PK P DT+VASVPS+PHSDVYHI VPSQRS+IVIQR GQR +QKWKGPDKISRIYGDWID
Sbjct: 299 PKTPADTVVASVPSVPHSDVYHIGVPSQRSSIVIQRPGQRANQKWKGPDKISRIYGDWID 358

[Close]
BLAST of Cp4.1LG15g02030 vs. TrEMBL
Match: A0A059C0M6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E002711 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.3e-100
Identity = 198/267 (74.16%), Postives = 210/267 (78.65%), Query Frame = 1 

Query: 64  PPNKKSRSSQDEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTE 123
           PPN +      EIVAAHEEEK V SEPREEFQIPSLG+S F  ESQRSYKGRHCKKFYTE
Sbjct: 108 PPNWQ------EIVAAHEEEKGVASEPREEFQIPSLGSSGFSGESQRSYKGRHCKKFYTE 167

Query: 124 EGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGG-------------------- 183
           EGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGG                    
Sbjct: 168 EGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGSGGGGGGGGGGGGGGG 227

Query: 184 --------GGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYG 243
                   GGGGGGG+G GSN KPSNWKTRICNKWELTGYCPFG+KCHFAHGAAELHRYG
Sbjct: 228 GGGVGGGVGGGGGGGAGAGSNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYG 287

Query: 244 GGLMETETRDSSSAPPDLKQGVLP-KAPGDTLVASVPSLPHSDVYHIVVPSQRSTIVIQR 301
           GGL+E+E RD++SAP D KQG  P K P DT VAS  S+PH+D YHI VPSQRS I+IQR
Sbjct: 288 GGLVESEARDATSAPADPKQGGAPSKTPADTAVASAVSVPHTDAYHIGVPSQRSAIIIQR 347

[Close]
BLAST of Cp4.1LG15g02030 vs. TrEMBL
Match: A0A061GA91_THECC (Nucleic acid binding protein, putative OS=Theobroma cacao GN=TCM_015690 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.8e-100
Identity = 192/249 (77.11%), Postives = 210/249 (84.34%), Query Frame = 1 

Query: 64  PPNKKSRSSQDEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTE 123
           PPN +      EIVAAHEEEK + SEPREEFQIPSLG+S+F  E+QRSYKGRHCKKFYTE
Sbjct: 128 PPNWQ------EIVAAHEEEKGILSEPREEFQIPSLGSSSFSGETQRSYKGRHCKKFYTE 187

Query: 124 EGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGG-------GGGGGGGGGGGG---SGN 183
           EGCPYGD+CTFLHDEQSKNRESVAISLGPGGY GG       GGGGGGGGGGGG   +GN
Sbjct: 188 EGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGGGGGAAAAGGGGGGGGGGGGAAAAGN 247

Query: 184 GSNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDL 243
           GSNSKPSNWKTRICNKWELTGYCPFG+KCHFAHG AELHRYGGGL+E E +DSS+ P D 
Sbjct: 248 GSNSKPSNWKTRICNKWELTGYCPFGNKCHFAHGVAELHRYGGGLVEAEAKDSSATPSDP 307

Query: 244 KQGVLP-KAPGDTLVASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRI 301
           KQG +P K P DT+  S PS+P SDVYH+ VPSQR+++VIQR GQR HQKWKGPDKISRI
Sbjct: 308 KQGGVPSKTPADTVAVSAPSVPLSDVYHLGVPSQRTSLVIQRPGQRAHQKWKGPDKISRI 367

[Close]
BLAST of Cp4.1LG15g02030 vs. TrEMBL
Match: M5W9T6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008182mg PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.6e-96
Identity = 207/356 (58.15%), Postives = 235/356 (66.01%), Query Frame = 1 

Query: 1   MDYSGG-NVVHVIPGMS--SENWPGE--VWATEEEYRAWNNG------------------ 60
           MDY    NVV VI G S   + W  +  VWATE+EYR WNNG                  
Sbjct: 1   MDYGRETNVVQVITGNSVGGDIWSADQAVWATEDEYRVWNNGDALADTMSNSNYDQRQSQ 60

Query: 61  -----------GGDGSIDTPSNSSY--------DQRQSQSRSGSEP------------PN 120
                        +    T SN S          +   + R+G+ P              
Sbjct: 61  SRSGSEPPNKKSRNSQDATSSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIEEL 120

Query: 121 KKSRSSQDEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGC 180
           ++   +  EIVAAHEEEK V SEPREE+QIP + T  +G E+QRSYKGRHCKKFYTEEGC
Sbjct: 121 RRPPPNWQEIVAAHEEEKGVSSEPREEYQIPIVSTG-YGVETQRSYKGRHCKKFYTEEGC 180

Query: 181 PYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGSGNGSNSKPSNWKTRI 240
           PYGD+CTFLHDEQSKNRESVAISLGPGGY             GG+ NG+N+KPSNWKTRI
Sbjct: 181 PYGDNCTFLHDEQSKNRESVAISLGPGGY-------------GGAANGANNKPSNWKTRI 240

Query: 241 CNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLP-KAPGDT 300
           CNKWELTGYCPFGSKCHFAHG AELHRYGGGL+E + R+SSSAPPD KQG +P K P DT
Sbjct: 241 CNKWELTGYCPFGSKCHFAHGVAELHRYGGGLVEGDVRESSSAPPDNKQGGVPSKTPADT 300

[Close]
BLAST of Cp4.1LG15g02030 vs. TAIR10
Match: AT1G32360.1 (AT1G32360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 291.2 bits (744), Expect = 7.3e-79
Identity = 170/269 (63.20%), Postives = 187/269 (69.52%), Query Frame = 1 

Query: 64  PPNKKSRSSQDEIVAAHEEEK----------VFSEPREEFQIPSLGTSNFGSESQRSYKG 123
           PPN +      EIVAAHEEE+          V   PREEFQIPSL +S   +ES RS+KG
Sbjct: 124 PPNWQ------EIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESGRSFKG 183

Query: 124 RHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGG--------- 183
           RHCKKFYTEEGCPYG+SCTFLHDE S+NRESVAISLGPGGY  GGGGG GG         
Sbjct: 184 RHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSS 243

Query: 184 ------GGGGGSGNGSN---SKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGG 243
                 GGGGGSG+GS     KPSNWKTRICNKWE+TGYCPFG+KCHFAHGAAELHR+GG
Sbjct: 244 SNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGG 303

Query: 244 GLMETETRDSSSAPPDLKQGVL-PKAPGDTLVASVPSLPHS--DVYHIVVPSQR-STIVI 301
           GL+E E +D  S  PD KQ V  PK   DT     P +PH+    YH  V  QR S+ V 
Sbjct: 304 GLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVT 363

[Close]
BLAST of Cp4.1LG15g02030 vs. TAIR10
Match: AT2G35430.1 (AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-35
Identity = 111/300 (37.00%), Postives = 136/300 (45.33%), Query Frame = 1 

Query: 24  VWATEEEY-RAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDEIVAAHEE 83
           VWATE++Y R W                     + +  G+E P+KK+RSS          
Sbjct: 34  VWATEDDYSRVW---------------------AINSDGAESPSKKTRSSSSS------- 93

Query: 84  EKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG-DSCTFLHD----- 143
                          +G S F        K + C KF     CPY   SC F H      
Sbjct: 94  --------------EIGKSFF--------KTKLCFKFRAGT-CPYSASSCHFAHSAEELR 153

Query: 144 --------------EQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGSGNGSNSKPSNWK 203
                         E S+NRES A+SLGP G                       K  NWK
Sbjct: 154 LPPPPPPNWQETVTEASRNRESFAVSLGPRG-----------------NVAQTLKSPNWK 213

Query: 204 TRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPG 263
           TRICNKW+ TGYCPFGS CHFAHG +ELH +GGGL+E E +  +SA  D KQ    +   
Sbjct: 214 TRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQ----RGQV 252

Query: 264 DTLVASVPSLPHSDVYHIVVPSQR--STIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           DT+ + V            V SQR  S +  + +G RT +KWKGPDKISR+YGDWIDDIE
Sbjct: 274 DTVTSLVSP---------GVSSQRTSSAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

[Close]
BLAST of Cp4.1LG15g02030 vs. TAIR10
Match: AT3G19360.1 (AT3G19360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 76/235 (32.34%), Postives = 108/235 (45.96%), Query Frame = 1 

Query: 81  EEEKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSK 140
           E E+     RE   +  +  +N+  + +   + + C+KF   E CPYGD C F+H++ SK
Sbjct: 154 ERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSK 213

Query: 141 NRE-------SVAISLGPGGYSGGGGGG---------GGGGGGGGSGNGSNSKPSNWKTR 200
            RE       S  IS+G                    G         NG   K   WKTR
Sbjct: 214 FREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTR 273

Query: 201 ICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDT 260
           +C K+++TG CPFG KCHFAHG AELH    G +E E  ++ ++    KQ V+   P + 
Sbjct: 274 LCMKFDITGQCPFGDKCHFAHGQAELHN-SVGRVEGEAMNAVASVN--KQAVV---PANE 333

Query: 261 LVASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDI 300
             A  P           V +  S +  +   ++   KW    KI+RIYGDWIDD+
Sbjct: 334 AFAMKPITQ--------VTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374

[Close]
BLAST of Cp4.1LG15g02030 vs. NCBI nr
Match: gi|778687889|ref|XP_011652645.1| (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 3.6e-120
Identity = 220/230 (95.65%), Postives = 224/230 (97.39%), Query Frame = 1 

Query: 73  QDEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC 132
           Q EIVAAHEEEK V SEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC
Sbjct: 124 QQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC 183

Query: 133 TFLHDEQSKNRESVAISLGPGGYSGGGGGGGG-GGGGGGSGNGSNSKPSNWKTRICNKWE 192
           TFLHDEQSKNRESVAISLGPGGYSGGGGGGGG GGGGGGSGNGSN+KPSNWKTRICNKWE
Sbjct: 184 TFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 243

Query: 193 LTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVP 252
           LTGYCPFG+KCHFAHGAAELHRYGGGLMETETRDSS+APPDLKQGVLPKAPGDTLVASVP
Sbjct: 244 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLPKAPGDTLVASVP 303

Query: 253 SLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           S PHSDVYH+VVPSQRSTIVIQR GQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 304 SAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 353

[Close]
BLAST of Cp4.1LG15g02030 vs. NCBI nr
Match: gi|778687893|ref|XP_004136190.2| (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis sativus])

HSP 1 Score: 438.7 bits (1127), Expect = 8.0e-120
Identity = 219/228 (96.05%), Postives = 223/228 (97.81%), Query Frame = 1 

Query: 75  EIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF 134
           EIVAAHEEEK V SEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF
Sbjct: 125 EIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF 184

Query: 135 LHDEQSKNRESVAISLGPGGYSGGGGGGGG-GGGGGGSGNGSNSKPSNWKTRICNKWELT 194
           LHDEQSKNRESVAISLGPGGYSGGGGGGGG GGGGGGSGNGSN+KPSNWKTRICNKWELT
Sbjct: 185 LHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWELT 244

Query: 195 GYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSL 254
           GYCPFG+KCHFAHGAAELHRYGGGLMETETRDSS+APPDLKQGVLPKAPGDTLVASVPS 
Sbjct: 245 GYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLPKAPGDTLVASVPSA 304

Query: 255 PHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           PHSDVYH+VVPSQRSTIVIQR GQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 305 PHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 352

[Close]
BLAST of Cp4.1LG15g02030 vs. NCBI nr
Match: gi|659132047|ref|XP_008465987.1| (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 2.0e-118
Identity = 216/229 (94.32%), Postives = 221/229 (96.51%), Query Frame = 1 

Query: 73  QDEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC 132
           Q EIVAAHEEEK V SEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC
Sbjct: 124 QQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC 183

Query: 133 TFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWEL 192
           TFLHDEQSKNRESVAISLGPGGYSGGGGG   GGGGGGSGNGSN+KPSNWKTRICNKWEL
Sbjct: 184 TFLHDEQSKNRESVAISLGPGGYSGGGGG---GGGGGGSGNGSNTKPSNWKTRICNKWEL 243

Query: 193 TGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPS 252
           TGYCPFG+KCHFAHGAAELHRYGGGLMETETRDSS+APPD KQGVLPKAPGDTLVASVPS
Sbjct: 244 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 303

Query: 253 LPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           +PHSDVYH+VVPSQRSTIVIQR GQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 304 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 349

[Close]
BLAST of Cp4.1LG15g02030 vs. NCBI nr
Match: gi|659132049|ref|XP_008465989.1| (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 4.4e-118
Identity = 215/227 (94.71%), Postives = 220/227 (96.92%), Query Frame = 1 

Query: 75  EIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF 134
           EIVAAHEEEK V SEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF
Sbjct: 125 EIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTF 184

Query: 135 LHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTG 194
           LHDEQSKNRESVAISLGPGGYSGGGGG   GGGGGGSGNGSN+KPSNWKTRICNKWELTG
Sbjct: 185 LHDEQSKNRESVAISLGPGGYSGGGGG---GGGGGGSGNGSNTKPSNWKTRICNKWELTG 244

Query: 195 YCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLP 254
           YCPFG+KCHFAHGAAELHRYGGGLMETETRDSS+APPD KQGVLPKAPGDTLVASVPS+P
Sbjct: 245 YCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPSVP 304

Query: 255 HSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           HSDVYH+VVPSQRSTIVIQR GQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 305 HSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 348

[Close]
BLAST of Cp4.1LG15g02030 vs. NCBI nr
Match: gi|778687896|ref|XP_011652646.1| (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X3 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 9.8e-110
Identity = 208/230 (90.43%), Postives = 212/230 (92.17%), Query Frame = 1 

Query: 73  QDEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC 132
           Q EIVAAHEEEK V SEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC
Sbjct: 124 QQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSC 183

Query: 133 TFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWE 192
           TFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGGGGSGNGSN+KPSNWKTRICNKWE
Sbjct: 184 TFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 243

Query: 193 LTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVP 252
           LTGYCPFG+KCHFAHGAA            ETRDSS+APPDLKQGVLPKAPGDTLVASVP
Sbjct: 244 LTGYCPFGNKCHFAHGAA------------ETRDSSAAPPDLKQGVLPKAPGDTLVASVP 303

Query: 253 SLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 301
           S PHSDVYH+VVPSQRSTIVIQR GQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 304 SAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 341

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g02030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H12_ARATH1.3e-7763.20Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g323... [more]
C3H56_ORYSJ1.6e-7247.61Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN... [more]
C3H28_ARATH4.0e-3437.00Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g354... [more]
C3H39_ARATH4.1e-1532.34Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g193... [more]
C3H39_ORYSJ2.0e-0666.67Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica GN... [more]
BLAST of Cp4.1LG15g02030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK26_CUCSA5.6e-12096.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901160 PE=4 SV=1[more]
W9R214_9ROSA2.1e-10381.07Zinc finger CCCH domain-containing protein 56 OS=Morus notabilis GN=L484_001869 ... [more]
A0A059C0M6_EUCGR1.3e-10074.16Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E002711 PE=4 SV=1[more]
A0A061GA91_THECC3.8e-10077.11Nucleic acid binding protein, putative OS=Theobroma cacao GN=TCM_015690 PE=4 SV=... [more]
M5W9T6_PRUPE5.6e-9658.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008182mg PE=4 SV=1[more]
BLAST of Cp4.1LG15g02030 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G32360.17.3e-7963.20 Zinc finger (CCCH-type) family protein[more]
AT2G35430.12.2e-3537.00 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT3G19360.12.3e-1632.34 Zinc finger (CCCH-type) family protein[more]
BLAST of Cp4.1LG15g02030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778687889|ref|XP_011652645.1|3.6e-12095.65PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis sat... [more]
gi|778687893|ref|XP_004136190.2|8.0e-12096.05PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis sat... [more]
gi|659132047|ref|XP_008465987.1|2.0e-11894.32PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis mel... [more]
gi|659132049|ref|XP_008465989.1|4.4e-11894.71PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis mel... [more]
gi|778687896|ref|XP_011652646.1|9.8e-11090.43PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X3 [Cucumis sat... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g02030.1Cp4.1LG15g02030.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 176..210
score: 7.1E-17coord: 109..138
score: 3.
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 181..206
score: 5.2
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 110..137
score: 0.086coord: 180..207
score: 5.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 110..138
score: 14.098coord: 180..208
score: 15
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 178..211
score: 9.03E-10coord: 109..138
score: 1.4
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 68..299
score: 2.3
NoneNo IPR availablePANTHERPTHR12547:SF18PROTEIN TIS11coord: 68..299
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g02030Cucsa.312990Cucumber (Gy14) v1cgycpeB0817
Cp4.1LG15g02030CmaCh19G002290Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g02030CmaCh02G016210Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g02030CmoCh19G002430Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g02030CmoCh02G016660Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g02030Csa3G901160Cucumber (Chinese Long) v2cpecuB239
Cp4.1LG15g02030MELO3C003423Melon (DHL92) v3.5.1cpemeB232
Cp4.1LG15g02030ClCG09G011800Watermelon (Charleston Gray)cpewcgB216
Cp4.1LG15g02030CSPI03G46570Wild cucumber (PI 183967)cpecpiB243
Cp4.1LG15g02030LsiUNG000280Bottle gourd (USVL1VR-Ls)cpelsiB190
Cp4.1LG15g02030MELO3C003423.2Melon (DHL92) v3.6.1cpemedB271
Cp4.1LG15g02030CsaV3_3G049030Cucumber (Chinese Long) v3cpecucB0298
Cp4.1LG15g02030Bhi05G000314Wax gourdcpewgoB0319
Cp4.1LG15g02030CsGy3G044020Cucumber (Gy14) v2cgybcpeB332
Cp4.1LG15g02030Carg24529Silver-seed gourdcarcpeB1344
Cp4.1LG15g02030Carg08847Silver-seed gourdcarcpeB1094
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g02030Cp4.1LG05g00270Cucurbita pepo (Zucchini)cpecpeB273
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g02030Melon (DHL92) v3.6.1cpemedB281
Cp4.1LG15g02030Silver-seed gourdcarcpeB0703
Cp4.1LG15g02030Silver-seed gourdcarcpeB1335
Cp4.1LG15g02030Cucumber (Chinese Long) v3cpecucB0300
Cp4.1LG15g02030Cucurbita pepo (Zucchini)cpecpeB231
Cp4.1LG15g02030Cucurbita pepo (Zucchini)cpecpeB285
Cp4.1LG15g02030Cucumber (Gy14) v1cgycpeB0848
Cp4.1LG15g02030Cucurbita maxima (Rimu)cmacpeB349
Cp4.1LG15g02030Cucurbita maxima (Rimu)cmacpeB819
Cp4.1LG15g02030Cucurbita moschata (Rifu)cmocpeB310
Cp4.1LG15g02030Cucurbita moschata (Rifu)cmocpeB773
Cp4.1LG15g02030Wild cucumber (PI 183967)cpecpiB245
Cp4.1LG15g02030Cucumber (Chinese Long) v2cpecuB241
Cp4.1LG15g02030Bottle gourd (USVL1VR-Ls)cpelsiB218
Cp4.1LG15g02030Watermelon (Charleston Gray)cpewcgB227
Cp4.1LG15g02030Watermelon (97103) v1cpewmB235
Cp4.1LG15g02030Watermelon (97103) v1cpewmB249
Cp4.1LG15g02030Melon (DHL92) v3.5.1cpemeB240
Cp4.1LG15g02030Cucumber (Gy14) v2cgybcpeB334