Cp4.1LG15g01930 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g01930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ribosome maturation factor rimM
Location	Cp4.1LG15 : 1623514 .. 1624940 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGGAAAAAATATGGAAAACAAGACAAAATGTTATAATTGCCTTTTAGTGAGCAAACATCGCCTTTCTCTCTCTACCTCTCTCTCTCTACAATGCAAAGGCAATCTCTAGGCTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCCAAATCCGATCAACTTCCGGCCGACGATCCAAAGCGCAAGAAGCATTCTCCATCTTCTTCCTCAATTGTCATCTACGACGGACAAGACGACGAGAAAGTCTCTAAATCTTTCCGATTCTCATTTCCATCGCCTTCTCCTCCGCGGCAGGAGAACCTCGTTCACGCCATCCCTATCCTTACCATTATCTGCTTCCTCATCCTTTACATCTTCTCGCACACTCCTTCGCAGTCAGGTACCTTCAATCGCTCCTTATTTCGCTTTACTTTCAATCTAATCGATCGTCTAGGTTAATATTCTGTTTCGATTTTTTCAGATTTGGCTCAGTTTCATGGATTCAAACATCCTTCTGAACAATTAGGTATAATGTAGTAGAGGATTTTGCTAATTGAGGCATTCTCTGTGTAATTTCTGTAATTGAACCTTTGGATTTGGTGTTTTACTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTGTGCCGAAGCAAGGCAACATTCTGGCGATTCAGAGTTTCCGTAACCTAAAAGAGATCGTAAAATCATCCTCTCATAAATCTCGCTCTCCGAGGAAACTCGCGGATTTCTAAACTCCGCATTTCCGATCATCTGAACTTCCGGTAAAATCTCACTGACCTCGTTTTCGCCGTACGGCTTCACTCGCCGCCGCGTGTGCTTCTGTACATCAAATACTCCGCCGGATCAAATCGTCTTTATTCCATTTCCTTTTAGTTTTCCAAGTTTTTTTGTCGGCGCTTCTGTAACTTCCGTTTAGATACTATAATCTTAAATCTAAACAAAGAATGAGTAAATAAATAGTTGATCAGAAAACAGAACCAGTTACCGAAGCACCGATAGATAGTTCACGTGAACTTCCGACGCCGGCGCGGCGGATACGAAAGTGGAATCCAGCTGGAGCATATTTACTGCTATTTTCGATTTTCCGAATCGGACCGTTACAGAATTGGGAGAAGGGCCAATACGCCAGTTGGAAAATACTGGCGTAGCTGCGGGAGTCAGGTTCTTTCTTCCTATCAAATTTACTTTTAGGCCCTCTATCTATTGCCTATTTATCTTTAGGCCCTCCGTCTATTGCCTATTTATCTTTAGGCCCTCCGTCTACTGCCTATTTATCTTTAGGCCCTCTGACTATTGCCTATTTATTTTTGGAAATTTTGGGTGATCGGGACATCTTGCCCCGTTTTATTATTCATTTCTTCCAAATTTTCTATCAAAATTTTCTATTTATTTTTGTTAGGATCAAAGTTTCGATCTCA

mRNA sequence

CAAATGGAAAAAATATGGAAAACAAGACAAAATGTTATAATTGCCTTTTAGTGAGCAAACATCGCCTTTCTCTCTCTACCTCTCTCTCTCTACAATGCAAAGGCAATCTCTAGGCTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCCAAATCCGATCAACTTCCGGCCGACGATCCAAAGCGCAAGAAGCATTCTCCATCTTCTTCCTCAATTGTCATCTACGACGGACAAGACGACGAGAAAGTCTCTAAATCTTTCCGATTCTCATTTCCATCGCCTTCTCCTCCGCGGCAGGAGAACCTCGTTCACGCCATCCCTATCCTTACCATTATCTGCTTCCTCATCCTTTACATCTTCTCGCACACTCCTTCGCAGTCAGATTTGGCTCAGTTTCATGGATTCAAACATCCTTCTGAACAATTAGAAATCAAAGCCGATGGAGACGAACTTATTGTGCCGAAGCAAGGCAACATTCTGGCGATTCAGAGTTTCCGTAACCTAAAAGAGATCGTAAAATCATCCTCTCATAAATCTCGCTCTCCGAGGAAACTCGCGGATTTCTAAACTCCGCATTTCCGATCATCTGAACTTCCGGTAAAATCTCACTGACCTCGTTTTCGCCGTACGGCTTCACTCGCCGCCGCGTGTGCTTCTGTACATCAAATACTCCGCCGGATCAAATCGTCTTTATTCCATTTCCTTTTAGTTTTCCAAGTTTTTTTGTCGGCGCTTCTGTAACTTCCGTTTAGATACTATAATCTTAAATCTAAACAAAGAATGAGTAAATAAATAGTTGATCAGAAAACAGAACCAGTTACCGAAGCACCGATAGATAGTTCACGTGAACTTCCGACGCCGGCGCGGCGGATACGAAAGTGGAATCCAGCTGGAGCATATTTACTGCTATTTTCGATTTTCCGAATCGGACCGTTACAGAATTGGGAGAAGGGCCAATACGCCAGTTGGAAAATACTGGCGTAGCTGCGGGAGTCAGGTTCTTTCTTCCTATCAAATTTACTTTTAGGCCCTCTATCTATTGCCTATTTATCTTTAGGCCCTCCGTCTATTGCCTATTTATCTTTAGGCCCTCCGTCTACTGCCTATTTATCTTTAGGCCCTCTGACTATTGCCTATTTATTTTTGGAAATTTTGGGTGATCGGGACATCTTGCCCCGTTTTATTATTCATTTCTTCCAAATTTTCTATCAAAATTTTCTATTTATTTTTGTTAGGATCAAAGTTTCGATCTCA

Coding sequence (CDS)

ATGCAAAGGCAATCTCTAGGCTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCCAAATCCGATCAACTTCCGGCCGACGATCCAAAGCGCAAGAAGCATTCTCCATCTTCTTCCTCAATTGTCATCTACGACGGACAAGACGACGAGAAAGTCTCTAAATCTTTCCGATTCTCATTTCCATCGCCTTCTCCTCCGCGGCAGGAGAACCTCGTTCACGCCATCCCTATCCTTACCATTATCTGCTTCCTCATCCTTTACATCTTCTCGCACACTCCTTCGCAGTCAGATTTGGCTCAGTTTCATGGATTCAAACATCCTTCTGAACAATTAGAAATCAAAGCCGATGGAGACGAACTTATTGTGCCGAAGCAAGGCAACATTCTGGCGATTCAGAGTTTCCGTAACCTAAAAGAGATCGTAAAATCATCCTCTCATAAATCTCGCTCTCCGAGGAAACTCGCGGATTTCTAA

Protein sequence

MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDEKVSKSFRFSFPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIKADGDELIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF

Homology

[Close]

BLAST of Cp4.1LG15g01930 vs. TrEMBL
Match: A0A0A0LE94_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901050 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-71
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSD+ PADD KRKKHSPSSSSI+ Y GQDD+K SKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIKADGDE 120
           FPSPSPPRQE LVHAIPILTIICFLILYIFSH+PSQSDLAQFHGFKHPS+QLEIKADGDE
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120

Query: 121 LIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
           LI+PK+GNILAIQSFRNLKEI KS S KSR PRKLADF
Sbjct: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 158

[Close]

BLAST of Cp4.1LG15g01930 vs. TrEMBL
Match: W9R3C9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017755 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30
Identity = 83/167 (49.70%), Postives = 106/167 (63.47%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRK-----KHSPSSSSIVIYDGQDDEKVSK 60
           MQRQSLGSPVSKLHGHG   +   L  DDPKRK         S+SS   Y  +DD K +K
Sbjct: 1   MQRQSLGSPVSKLHGHGGQKEESLLVEDDPKRKDLVASSSCSSTSSTADYGYEDDSKAAK 60

Query: 61  SFRFSFPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIK 120
             R S  SP P R +  +H IP+LT++CFLIL++FSHTPSQSD+AQF GFK P+ +++  
Sbjct: 61  PRRLS-SSPPPLRPDRCIHLIPVLTLLCFLILFLFSHTPSQSDMAQFKGFKWPANRIDSA 120

Query: 121 ----ADGDELIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
                D       ++ ++LAI+S RNL+EI K +  KSR  RK ADF
Sbjct: 121 ENEIGDIGRFSELRKSDVLAIRSLRNLQEIRKQAP-KSRYHRKFADF 165

[Close]

BLAST of Cp4.1LG15g01930 vs. TrEMBL
Match: A0A061GDU2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_016575 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.6e-28
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
           MQRQSLGSP SKLH HG G +S Q  A+DPKR+        ++I D   D K SK  R S
Sbjct: 1   MQRQSLGSPSSKLHIHG-GEESSQ--AEDPKRR--------VIIDDDDADRKDSKPRRLS 60

Query: 61  FP---SPS-----PPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQL 120
           F    SPS     PP+ E  +H IP+LT++CFLILY+ SH+PSQSDLA F+GFKH S+ L
Sbjct: 61  FSPTSSPSSSLTSPPKPEKFIHLIPVLTLLCFLILYLSSHSPSQSDLAHFNGFKHSSKHL 120

Query: 121 EIK--ADGDELIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
           + +  +D    I  ++G++LAI+S RNL+E+ K    KSR  RK+ADF
Sbjct: 121 DSREISDVGRFIELRRGDVLAIRSLRNLQELDKYVP-KSRPHRKIADF 156

[Close]

BLAST of Cp4.1LG15g01930 vs. TrEMBL
Match: A0A067LDV1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02954 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.2e-27
Identity = 79/164 (48.17%), Postives = 102/164 (62.20%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDE-KVSKSFRF 60
           MQRQSLGSPVSKL+ HG   K D L +D          + S+  YD      K +K  RF
Sbjct: 1   MQRQSLGSPVSKLNSHGGAPKEDTLMSD----------TLSLPAYDDDGGHRKATKPRRF 60

Query: 61  SF----PSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIK 120
           S     PS SP + E LVH IPILT +CFL+LY+ SH+PSQSDL+QF+GFK   + ++  
Sbjct: 61  SMSSSSPSSSPSKPEKLVHFIPILTFLCFLVLYLVSHSPSQSDLSQFNGFKQSLKHIDSV 120

Query: 121 ADGDELIVPKQGNILAIQSFRNLKEIV-KSSSHKSRSPRKLADF 159
            D       ++G++LA QS RNL+EI  K +S KSR+ RK+ADF
Sbjct: 121 TDVSGFSELRRGDVLARQSLRNLREIADKRASAKSRAHRKIADF 154

[Close]

BLAST of Cp4.1LG15g01930 vs. TrEMBL
Match: A0A067KAS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19359 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.9e-27
Identity = 83/168 (49.40%), Postives = 102/168 (60.71%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDE--KVSKSFR 60
           MQRQSLGSPV+KLH HG  A  D L           P S S   YD  DDE  K +K  R
Sbjct: 1   MQRQSLGSPVTKLHSHGGAATDDSL----------MPDSLSFPDYDDDDDEHRKAAKPRR 60

Query: 61  FSFPSPS-----PPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLE 120
           FS  S S       + E LVH IP+LT +CFLILY+ SH+PSQSDLAQFHGFK  ++ ++
Sbjct: 61  FSMSSSSLSSSSTSKPEKLVHFIPVLTFLCFLILYLVSHSPSQSDLAQFHGFKRSTKLID 120

Query: 121 IK--ADGDELIVPKQGNILAIQSFRNLKEIV-KSSSHKSRSPRKLADF 159
               +D       ++ + LAI+S RNL+EI  K +S KSRS RK+ADF
Sbjct: 121 STQISDVSGFSELRRADSLAIRSLRNLREIADKRASPKSRSNRKIADF 158

[Close]

BLAST of Cp4.1LG15g01930 vs. TAIR10
Match: AT2G35470.1 (AT2G35470.1 unknown protein)

HSP 1 Score: 107.5 bits (267), Expect = 7.9e-24
Identity = 78/168 (46.43%), Postives = 98/168 (58.33%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVI-YDGQDDEKVSKSFRF 60
           MQR SL S  SKLH +G G K D    DD K    SPSSSS  + YD  + +        
Sbjct: 1   MQRISLDSSASKLHSYG-GRKDDTYDIDDLKPASSSPSSSSSAVDYDDHELKDFKPRRLS 60

Query: 61  SFPSP---SPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIK- 120
           S  SP   +  +QE LVH IPILT+ICF+ILY+ S+ PSQSDLAQF+GF  PS+ LE   
Sbjct: 61  SLQSPFVTTNQKQEKLVHFIPILTLICFIILYLTSYAPSQSDLAQFNGFMRPSKHLESSD 120

Query: 121 ADGDELIVPKQGNILAIQ-SFRNLKE----IVKSSSHKSRSPRKLADF 159
            +GDE+    + + L+I+ S RNL+E      KS   +  S RK ADF
Sbjct: 121 ENGDEISGFIRADTLSIRSSVRNLQETESFTTKSLPRRRTSHRKTADF 167

[Close]

BLAST of Cp4.1LG15g01930 vs. NCBI nr
Match: gi|449436838|ref|XP_004136199.1| (PREDICTED: uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 1.6e-71
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSD+ PADD KRKKHSPSSSSI+ Y GQDD+K SKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIKADGDE 120
           FPSPSPPRQE LVHAIPILTIICFLILYIFSH+PSQSDLAQFHGFKHPS+QLEIKADGDE
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120

Query: 121 LIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
           LI+PK+GNILAIQSFRNLKEI KS S KSR PRKLADF
Sbjct: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 158

[Close]

BLAST of Cp4.1LG15g01930 vs. NCBI nr
Match: gi|778687861|ref|XP_011652641.1| (PREDICTED: uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 4.0e-70
Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSD+ PADD KRKKHSPSSSSI+ Y GQDD+K SKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQL-EIKADGD 120
           FPSPSPPRQE LVHAIPILTIICFLILYIFSH+PSQSDLAQFHGFKHPS+QL EIKADGD
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLAEIKADGD 120

Query: 121 ELIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
           ELI+PK+GNILAIQSFRNLKEI KS S KSR PRKLADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 159

[Close]

BLAST of Cp4.1LG15g01930 vs. NCBI nr
Match: gi|659132077|ref|XP_008466005.1| (PREDICTED: uncharacterized protein LOC103503567 isoform X2 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 139/159 (87.42%), Postives = 146/159 (91.82%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSD+ PADD KRKKHSPSSSSI+ Y GQDD+K SKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIKA-DGD 120
           FPSPSPPRQE LVHAIPILTIICFLILYIFSH+PSQSDLAQFHGFK PS+QLEIKA DG 
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLEIKADDGH 120

Query: 121 ELIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
           ELI+PK+GNILAIQSFRNLKEI KS S KSR PRKLADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 159

[Close]

BLAST of Cp4.1LG15g01930 vs. NCBI nr
Match: gi|659132075|ref|XP_008466004.1| (PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 4.2e-67
Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSD+ PADD KRKKHSPSSSSI+ Y GQDD+K SKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQL-EIKA-DG 120
           FPSPSPPRQE LVHAIPILTIICFLILYIFSH+PSQSDLAQFHGFK PS+QL EIKA DG
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLAEIKADDG 120

Query: 121 DELIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
            ELI+PK+GNILAIQSFRNLKEI KS S KSR PRKLADF
Sbjct: 121 HELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 160

[Close]

BLAST of Cp4.1LG15g01930 vs. NCBI nr
Match: gi|703100515|ref|XP_010096940.1| (hypothetical protein L484_017755 [Morus notabilis])

HSP 1 Score: 139.4 bits (350), Expect = 5.3e-30
Identity = 83/167 (49.70%), Postives = 106/167 (63.47%), Query Frame = 1


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDQLPADDPKRK-----KHSPSSSSIVIYDGQDDEKVSK 60
           MQRQSLGSPVSKLHGHG   +   L  DDPKRK         S+SS   Y  +DD K +K
Sbjct: 1   MQRQSLGSPVSKLHGHGGQKEESLLVEDDPKRKDLVASSSCSSTSSTADYGYEDDSKAAK 60

Query: 61  SFRFSFPSPSPPRQENLVHAIPILTIICFLILYIFSHTPSQSDLAQFHGFKHPSEQLEIK 120
             R S  SP P R +  +H IP+LT++CFLIL++FSHTPSQSD+AQF GFK P+ +++  
Sbjct: 61  PRRLS-SSPPPLRPDRCIHLIPVLTLLCFLILFLFSHTPSQSDMAQFKGFKWPANRIDSA 120

Query: 121 ----ADGDELIVPKQGNILAIQSFRNLKEIVKSSSHKSRSPRKLADF 159
                D       ++ ++LAI+S RNL+EI K +  KSR  RK ADF
Sbjct: 121 ENEIGDIGRFSELRKSDVLAIRSLRNLQEIRKQAP-KSRYHRKFADF 165

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g01930 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG15g01930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE94_CUCSA	1.1e-71	89.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901050 PE=4 SV=1	[more]
W9R3C9_9ROSA	3.7e-30	49.70	Uncharacterized protein OS=Morus notabilis GN=L484_017755 PE=4 SV=1	[more]
A0A061GDU2_THECC	2.6e-28	50.60	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_016575 PE=4 SV=1	[more]
A0A067LDV1_JATCU	2.2e-27	48.17	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02954 PE=4 SV=1	[more]
A0A067KAS9_JATCU	2.9e-27	49.40	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19359 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g01930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35470.1	7.9e-24	46.43	unknown protein	[more]

BLAST of Cp4.1LG15g01930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436838\|ref\|XP_004136199.1\|	1.6e-71	89.24	PREDICTED: uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus]	[more]
gi\|778687861\|ref\|XP_011652641.1\|	4.0e-70	88.68	PREDICTED: uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus]	[more]
gi\|659132077\|ref\|XP_008466005.1\|	1.7e-68	87.42	PREDICTED: uncharacterized protein LOC103503567 isoform X2 [Cucumis melo]	[more]
gi\|659132075\|ref\|XP_008466004.1\|	4.2e-67	86.88	PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo]	[more]
gi\|703100515\|ref\|XP_010096940.1\|	5.3e-30	49.70	hypothetical protein L484_017755 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g01930.1	Cp4.1LG15g01930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35297	FAMILY NOT NAMED	coord: 2..158 score: 1.6
None	No IPR available	PANTHER	PTHR35297:SF2	SUBFAMILY NOT NAMED	coord: 2..158 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG15g01930	Cucsa.312900	Cucumber (Gy14) v1	cgycpeB0817
Cp4.1LG15g01930	CmaCh19G002200	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g01930	CmaCh02G016270	Cucurbita maxima (Rimu)	cmacpeB615
Cp4.1LG15g01930	CmoCh02G016710	Cucurbita moschata (Rifu)	cmocpeB564
Cp4.1LG15g01930	CmoCh19G002350	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g01930	Cla016235	Watermelon (97103) v1	cpewmB235
Cp4.1LG15g01930	Csa3G901050	Cucumber (Chinese Long) v2	cpecuB239
Cp4.1LG15g01930	MELO3C003431	Melon (DHL92) v3.5.1	cpemeB232
Cp4.1LG15g01930	ClCG09G011720	Watermelon (Charleston Gray)	cpewcgB216
Cp4.1LG15g01930	CSPI03G46480	Wild cucumber (PI 183967)	cpecpiB243
Cp4.1LG15g01930	MELO3C003431.2	Melon (DHL92) v3.6.1	cpemedB271
Cp4.1LG15g01930	CsaV3_3G048920	Cucumber (Chinese Long) v3	cpecucB0298
Cp4.1LG15g01930	Bhi05G000303	Wax gourd	cpewgoB0319
Cp4.1LG15g01930	CsGy3G043930	Cucumber (Gy14) v2	cgybcpeB332
Cp4.1LG15g01930	Carg24537	Silver-seed gourd	carcpeB1344
Cp4.1LG15g01930	Carg08853	Silver-seed gourd	carcpeB1094

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG15g01930	Cp4.1LG05g00240	Cucurbita pepo (Zucchini)	cpecpeB273

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g01930	Cucurbita pepo (Zucchini)	cpecpeB231
Cp4.1LG15g01930	Cucurbita pepo (Zucchini)	cpecpeB285
Cp4.1LG15g01930	Cucumber (Gy14) v1	cgycpeB0848
Cp4.1LG15g01930	Cucurbita maxima (Rimu)	cmacpeB349
Cp4.1LG15g01930	Cucurbita maxima (Rimu)	cmacpeB819
Cp4.1LG15g01930	Cucurbita moschata (Rifu)	cmocpeB310
Cp4.1LG15g01930	Cucurbita moschata (Rifu)	cmocpeB773
Cp4.1LG15g01930	Wild cucumber (PI 183967)	cpecpiB245
Cp4.1LG15g01930	Cucumber (Chinese Long) v2	cpecuB241
Cp4.1LG15g01930	Bottle gourd (USVL1VR-Ls)	cpelsiB190
Cp4.1LG15g01930	Bottle gourd (USVL1VR-Ls)	cpelsiB218
Cp4.1LG15g01930	Watermelon (Charleston Gray)	cpewcgB227
Cp4.1LG15g01930	Watermelon (97103) v1	cpewmB249
Cp4.1LG15g01930	Melon (DHL92) v3.5.1	cpemeB240
Cp4.1LG15g01930	Cucumber (Gy14) v2	cgybcpeB334
Cp4.1LG15g01930	Melon (DHL92) v3.6.1	cpemedB281
Cp4.1LG15g01930	Silver-seed gourd	carcpeB1335
Cp4.1LG15g01930	Cucumber (Chinese Long) v3	cpecucB0300