Cp4.1LG15g00540 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g00540
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG15 : 285924 .. 290274 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTTTTTATGTTTAGAAACTTGGATTTTGGTGAATCTACAGGTTTTTGATGAAGCTGAACAATGAGACAGTCTCAATCGAGCTCAAAAATGGAACTGTTGTCCATGGAACTATCACAGGTATCCTTCTTACTTTCACTCACAACCACGCACATTGATATTTTCTTAATCTTGTTAAACCCTAGATTTACCAACTTTGTAGCAGAGCTTTTTTTAACTTCCAACTTCTGTTTTGTTTTCTTCTTTGAACTCCACTGTAGTGAAAGTTGTAGAATGTTTCAGTTGGAAGGGATAGTTGGAATATGGGTTCTACTGTCAATTTGGAGTGGTTTATGATTTATCTTGAACCTTCTTGTTCTTGATAATTTGGCTTACATAGATTTTTCTCTGCTACATTGCTGCTAGAAATTTAATTAATGTTTCGTTTAAAACTGTGTGTGACTATTTTTGTTGCGATGGCTGAAGTACATTGCTACTATTAGTCACGCCAAGGTTCAGTCTGTCCGCCAGTGTACGATAATCGTTTTTCTTGCTTATGTCTCACAACTATCTCCCAACATTTGTTCCTGCAATTGTGTAGTTGTGTAAGCTAACTGAAGAGTTCTGGCAAGCGCGCGCTTGGAGAACCGCTATCCCACTCCCATTTTGAATCTTAAAAAATAGTTAGCTAGTAGATATTGTCCTCTTTGGGTTTTCCCTTTCGAGCTTCCCTTCAAAGTTTTTAAAACGCGTTTGGTAGGGAGAAGTTTCCACACCCTTATAAAGAATGCTTTGTTCTCCTCCCCAACCAGTGTGGGATCTCACAATCCACCCCCCTTCAGGGGCCTAGTGTCTTCGTTGGCACTCGTTCCCTTCTCCAATCAATGTGGGACCTCCAATCCACCCCTCTTCGGGGCTCAGCCTCCTCGCTGGCACATCGTCCGATTTCTAGCTCTGATACCATTTGTAACAGTCTAAGCCCACCACTAGCAGATAATGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCTCTCAAGGTTTTTAAAACGTGTCTTCTAGGGAGAGGTTTCCACACTCTTATAAATAATGCTTCGTTCTCCTCCTCAACTGATATGGGATCTTCAACTATCATCATTTAAAAAAAAAAAAAAAAAACTAGTATTAAACTCATAGGTTGCTAACGGGCAATTAAATTCCTTGTCATCTGAGCGTTGGGAGGATGCGGTGTTTTCTCTGTATAGTTTTTATTTTTATCATTATTAATAAACAAATCAATTTGAACTATTGACTACTGTCTACTGATGCTGAATGTCCATTCTATTTCATGGCATTATCAGTAGATTTAAACAAATCTTTTGAATGTCCTCTCACATTTATATGGACTGATTCCTACTATTCCTTCTTTCCCCTTTGTTTTGTAGGGGTTGATTCTTGATCTAATAGAATTATTTTGCTGTATCTTGATCTAATAGAATTATTTTTGGTTTATCCAGACTAATATCAATCCAACCCATTTCATGAATAAAATGTGACCAAAACCAAGTGAATATACTTCAACTTTTAACTTGAACTGTTTTTCACATGCACTAGAATGGCATGAACTTAGTCTGATTAAACACTAACTTCTGCTGAACACCAGTATTTTTGGATTTTGTTTCTCATATGCCATTCTTCGGTGCATTATGATATATGCCATCCTTGCGTTTTGGGTTTTGTCTGGGTTTTGTCTTCTTTATCGTTTGAAACGTAATAATATTTACCATCCCTAAACCCTTGCATTTAGGGTTTTTCTTCTTTATTAATTAATAAAAAAATTATATATAGTGCACATTACAAAAGAAAGGTCTTGCTTTTTTATTTTTTTGCTCCTTGCACGACATAAGACTATTGTTCCTTGAGCTTTAAAAAACACTGATTACAACAGAATATGAATATCTTTTATTTGAATAACCATTGTAAAATGTTTGCGATACATTACCAATAGAATCTATAATAGATTATTTTTTCCTTAAGAAATCCATAGAAGCACAATTCCAAAAGATTTTAGCCTTAAATTTAAGCCATCAGGCTGTGAGGGCTTCCAAGAAAAATCGTCAACCAAGCTGGGTTGGCATAAACAGAAACCAGGCTCATTGAACATGAAAGACCACCTCCTATAGAAAAAGGTCAGTGGAGGTAATGGTAATTTTGGGTTTCATCATAGGAATAGCAAAGGAACAAACCAGGGAGAGAACCCAATTTTGAAACTTTTTTTGAGCCGCTTGGGGTGTTGAGGTTTCTTTAAGTAAGTGACCACACAATCAGATTAACCTTCCTGGGGACGTTAAACTTCCAAACTGATTTAACCAAAGGAGTTTTCAGCTTTAGCAAGGTCATAGAGAGTTTAATGAAAGCGATTTAGAGGAGAAGCAGTTGAATGAATCAATGTATTCTACCAGTCTTGGCCAGCTTCTAATTGAAACGTATCAATGTGTCCTATAAAGGCTATACAACTACCAATTTCTCTATGAAAAGAGCGAGCAAGCACTCCACAATTATCCCCCAATATTACCTATGGTTTTGGTTTAGGCTTCTTTGCCTATCTTTCTGGTTTAACCCCTTGTTGCCAACCATCACTCTTCTCCCTAAGCATTTAAGAATTAGGGCGTTATTTCTCTACTTCTGGAAAGAGCCAATGGAAGGGAAGTCCAACTCCCTTTTAATGGGTGACTCAGGAGTTGGTGAATATTGATTAGATTGCATTAAGAAGTAGGATGTTATTTTCTCTACTTCTGGGAAGAGCCAATTGAAGGAAAGTCCCAACTCCCTTTTATTGGGTGCTTCCACTTAGAGTCGTTTCTCACAAGATGCCTTTATGGGAGAGTTGGGACTCAATTTCATAATTTTAGTTGGTTACCTCTTTTGTGGGAGGATTTCAACTGAGATTATAAACAATGTTTTAAAAAGCTAAAGTCAGCCTTGAGACTTTTCCACCGGTGGAGGCGTGGTGAAAGCCTCAAGGTGGTATGAAGCATAAGACTAATTTAATTAAATTTTTTTTTACCAAGTATTGATAAACAAACTTAGTAATCATAAAAAGTTAAAAAAAAAAAAAACCTATGAAGCATGACACATATGTCCGGACATGCTTTGGCCATGCGATACATGGCTAGACACACCTCTAGATAATATTTAACCCATAAAATAGGGGAAATTTTGAGATTTTCTTATAGATTGAATCTTTAAATATTGATCAATCCTAAAGTATTAGGATGACATGTTCATCCTCTTGCAGCCAACTAATCTTTTTATATGTTTTAAGGTTTCAAATATTGTTAATTGACTTAACTATGGATGTTTTTAGTGAAGCATATTTTATTTTTATGTTTAATTCACATTTTGTCTATTAAAAAAACAGACTAATATACCTATATCGACACATATTTTATATAAAAAAACATGTCCCCAAGGTGCTTGTGTCCTACTTTTTAAGAATTTGATGTGTCTCAGTGTTTATGTCATTGTCTTGTATCTGTGCTTCTTAGATCATTCATGTCAATTGCACCTAAACATAAACTCTAAAGTGATATCATTAACGTCACTATTGTTATCATTAAGAGGAATCACTGTTTGGTTGATTTTGAGTGATTCTCGTGTTTCATAGGTGTGGACATCAGCATGAATACACATTTGAAGGCTGTGAAGCTTACTCTAAAGGGTAAAAATCCAGTCACCATGGATCATTTAAGTGTGAGGGGCAACAACATCAGATATTATATTCTACCTGACAGCTTGAATCTCGAGACTTTACTTGTTGAAGAGACACCGAGGGTCAAGCCGAAGAAACCAACTGCAGGTACGTGTTGTCCTTGTATTCATGCCTATACTTATGGTCATTTTCTGCAAATCAACTTGTGTATACCGAATCATATACTACCCATTATCAAATGTGTTGCTTATGCATTTCTACACTCTACTGCAACTACAGGGAAGCCTATGGGACGTGGACGAGGACGTGGGCGTGGGCGCGGTCGTGGTCGTGGACGCTAGATTTGTTGCAGTTGTTTCAAGTTTTGAGACCGGTAGTGTAAACACTTGTATTGTAGCGAAGGATTCTGAATTTAGTGACGGTATAGCAATTCACTGCTCAATCTCATGTGTTTATTACAACGTTATCCAGTTGTTTTTCTATGATTGACGTAGCCTTACTATGTTTTTTTGATGCCTGGGGTCTGTTATTGATTTACACTCTTAATATCATCACAATGATCAAACTCTGGCATGTCTCTAGATTGGAATCTCGTCTCTTATCTTCCAACTTTGATAGACGTAGTCATGCAGTTCTTAAGTTGGTTACAATGAAAGACTATTGTGTCAAGTCATTTCTGTAA

mRNA sequence

ATGGCCAAATCCATAGAAGCACAATTCCAAAAGATTTTAGCCTTAAATTTAAGCCATCAGGCTGTGAGGGCTTCCAAGAAAAATCGTCAACCAAGCTGGCAAGGTCATAGAGAGTTTAATGAAAGCGATTTAGAGGAGAAGCAGTTGAATGAATCAATGTATTCTACCAGTCTTGGCCAGCTTCTAATTGAAACGCTATACAACTACCAATTTCTCTATGAAAAGAGCGAGCAAGCACTCCACAATTATCCCCCAATATTACCTATGCTAAAGTCAGCCTTGAGACTTTTCCACCGGTGGAGGCGTGGTGAAAGCCTCAAGGTGAGACACCGAGGGTCAAGCCGAAGAAACCAACTGCAGGTACGTGTTGTCCTTGTATTCATGCCTATACTTATGGTCATTTTCTGCAAATCAACTTGTGTATACCGAATCATATACTACCCATTATCAAATGTGTTGCTTATGCATTTCTACACTCTACTGCAACTACAGGGAAGCCTATGGGACGTGGACGAGGACGTGGGCGTGGGCGCGGTCGTGGTCGTGGACGCTAGATTTGTTGCAGTTGTTTCAAGTTTTGAGACCGGTAGTGTAAACACTTGTATTGTAGCGAAGGATTCTGAATTTAGTGACGCCTTACTATGTTTTTTTGATGCCTGGGGTCTGTTATTGATTTACACTCTTAATATCATCACAATGATCAAACTCTGGCATGTCTCTAGATTGGAATCTCGTCTCTTATCTTCCAACTTTGATAGACGTAGTCATGCAGTTCTTAAGTTGGTTACAATGAAAGACTATTGTGTCAAGTCATTTCTGTAA

Coding sequence (CDS)

ATGGCCAAATCCATAGAAGCACAATTCCAAAAGATTTTAGCCTTAAATTTAAGCCATCAGGCTGTGAGGGCTTCCAAGAAAAATCGTCAACCAAGCTGGCAAGGTCATAGAGAGTTTAATGAAAGCGATTTAGAGGAGAAGCAGTTGAATGAATCAATGTATTCTACCAGTCTTGGCCAGCTTCTAATTGAAACGCTATACAACTACCAATTTCTCTATGAAAAGAGCGAGCAAGCACTCCACAATTATCCCCCAATATTACCTATGCTAAAGTCAGCCTTGAGACTTTTCCACCGGTGGAGGCGTGGTGAAAGCCTCAAGGTGAGACACCGAGGGTCAAGCCGAAGAAACCAACTGCAGGTACGTGTTGTCCTTGTATTCATGCCTATACTTATGGTCATTTTCTGCAAATCAACTTGTGTATACCGAATCATATACTACCCATTATCAAATGTGTTGCTTATGCATTTCTACACTCTACTGCAACTACAGGGAAGCCTATGGGACGTGGACGAGGACGTGGGCGTGGGCGCGGTCGTGGTCGTGGACGCTAGATTTGTTGCAGTTGTTTCAAGTTTTGAGACCGGTAGTGTAAACACTTGTATTGTAGCGAAGGATTCTGAATTTAGTGACGCCTTACTATGTTTTTTTGATGCCTGGGGTCTGTTATTGATTTACACTCTTAATATCATCACAATGATCAAACTCTGGCATGTCTCTAGATTGGAATCTCGTCTCTTATCTTCCAACTTTGATAGACGTAGTCATGCAGTTCTTAAGTTGGTTACAATGAAAGACTATTGTGTCAAGTCATTTCTGTAA

Protein sequence

MAKSIEAQFQKILALNLSHQAVRASKKNRQPSWQGHREFNESDLEEKQLNESMYSTSLGQLLIETLYNYQFLYEKSEQALHNYPPILPMLKSALRLFHRWRRGESLKVRHRGSSRRNQLQVRVVLVFMPILMVIFCKSTCVYRIIYYPLSNVLLMHFYTLLQLQGSLWDVDEDVGVGAVVVVDARFVAVVSSFETGSVNTCIVAKDSEFSDALLCFFDAWGLLLIYTLNIITMIKLWHVSRLESRLLSSNFDRRSHAVLKLVTMKDYCVKSFL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006396 RNA processing
cellular_component GO:0005575 cellular_component
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g00540.1Cp4.1LG15g00540.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g00540CmaCh19G000490Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g00540CmoCh19G000480Cucurbita moschata (Rifu)cmocpeB481
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g00540Wax gourdcpewgoB0321
Cp4.1LG15g00540Cucurbita pepo (Zucchini)cpecpeB154
Cp4.1LG15g00540Cucurbita pepo (Zucchini)cpecpeB259
Cp4.1LG15g00540Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG15g00540Cucumber (Gy14) v1cgycpeB0507
Cp4.1LG15g00540Cucurbita maxima (Rimu)cmacpeB373
Cp4.1LG15g00540Cucurbita maxima (Rimu)cmacpeB374
Cp4.1LG15g00540Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g00540Cucurbita moschata (Rifu)cmocpeB337
Cp4.1LG15g00540Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g00540Wild cucumber (PI 183967)cpecpiB240
Cp4.1LG15g00540Wild cucumber (PI 183967)cpecpiB254
Cp4.1LG15g00540Cucumber (Chinese Long) v2cpecuB236
Cp4.1LG15g00540Cucumber (Chinese Long) v2cpecuB253
Cp4.1LG15g00540Bottle gourd (USVL1VR-Ls)cpelsiB192
Cp4.1LG15g00540Bottle gourd (USVL1VR-Ls)cpelsiB211
Cp4.1LG15g00540Bottle gourd (USVL1VR-Ls)cpelsiB203
Cp4.1LG15g00540Bottle gourd (USVL1VR-Ls)cpelsiB209
Cp4.1LG15g00540Watermelon (Charleston Gray)cpewcgB226
Cp4.1LG15g00540Watermelon (Charleston Gray)cpewcgB239
Cp4.1LG15g00540Watermelon (Charleston Gray)cpewcgB240
Cp4.1LG15g00540Watermelon (Charleston Gray)cpewcgB242
Cp4.1LG15g00540Watermelon (97103) v1cpewmB244
Cp4.1LG15g00540Watermelon (97103) v1cpewmB253
Cp4.1LG15g00540Watermelon (97103) v1cpewmB272
Cp4.1LG15g00540Melon (DHL92) v3.5.1cpemeB222
Cp4.1LG15g00540Melon (DHL92) v3.5.1cpemeB239
Cp4.1LG15g00540Cucumber (Gy14) v2cgybcpeB190
Cp4.1LG15g00540Cucumber (Gy14) v2cgybcpeB753
Cp4.1LG15g00540Silver-seed gourdcarcpeB0160
Cp4.1LG15g00540Silver-seed gourdcarcpeB1057
Cp4.1LG15g00540Cucumber (Chinese Long) v3cpecucB0294
Cp4.1LG15g00540Cucumber (Chinese Long) v3cpecucB0320