Cp4.1LG14g06820 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG14g06820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionVesicle transport protein, Got1/SFT2-like protein
LocationCp4.1LG14 : 252233 .. 257140 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGGAATTCCAGCCGAGACGTATTTGTCGACGACGAAGAGTGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCCCTAACTCCTGTACAGGTACTTCAAACAACCACCACAGAGCTCCGCTTGTGGAAAGTCTTATGGCTTTTGCTCTAGTTTTTCTTTTTGTTCGGTTTTCATACTGTTTTGGTCTTTTGCTGATCAGAGACTTTACGGTTTTGGAGGCTGCTTGATCGGGGGCGTGGATTTCATGATTTTGGTATGAATGAACATTTAACCTACCTCTACTTCTAATGCAATTTCATATGTGTTTATGTCATATGCATCTTCTGTATATGGGGAACTTTGATGATAATTTTGGATTTGAGCCTCAAGTTACGATCTGGGTAGGATTGGTAACGGGAGGTTTTCTTTATTTCCATTATTATTTTGGAATTTAATAGGATTTATATTATCTAACTATCCACTGGTTGGTCCTTGAGGCTTCCAGAATAAATTGGAAAACACAACAAAGAAGGAAGCCGGGATTGAATTTGGATAGAAAGCTGAGGAATTTCCTTTAAGAAGGGAATACTAAAGACAAATTAAGTCGCCAGGTCAATTGGGAGATTGTTTCTACCAATCGAAAATGGGGGACTCTTGATTGGGTATAAGGAAGAAAGTAGGACATTAAATATCAAAAGGATATGGCGACTTTTACCAACTCTGATGAATCGATGGGAGAGTAAGTGGATGTTTTACAAGTAAGGGGGATTGGGTGCTACTGCTGTCAAAGTCCATGGTCTAATATTACAAAACTGAGATGATTTATTGAGGCATCCACTAGCATTGATTTGGCAAATTTAAGGAAAACCTTGTGTTTAGAGAGACTACTGGGTAGAGTAGTCATCTCTGTTGGCAAGATTTTTAAGGTTGTTTATAGCTTCACCATATAGAAAAGGATCATATCAAATGGATATGGCGGCTTTCTGACTTTGATGAATCGTGGAATGGGATTCTATCCAGTACATAAGGGAGAATACCAAGGATGTTTTATAAGTAGGGAGCGTTGGGGACTACTGTTATCAAAGTCCATGGTCCAATATTACAAAACTGAGATGATTTATAGAGGGATTGACTGGCATTGAGGTGGCAAATTGAAGGAGAACCTTATTCTATAGAGTCCGCTGGGTAGGGGAGTCATCTCTGTTGGCAAGATTTTTAAGGTGTTTGTAGCTTCACCAAATAGAAAATGACAATAAGTAAAGCATGGGAGGATGTTCTTTGAACATGACAACCACTAAGGACATAACTGATCCGGAAATGGGTATTGAGAAAGGAGTTGTCTACAGCAATCTAGAAGGAAAGAATCCCTAAGGAAGTCAACTTCTTTATGTGGACATTATGTCATGATGGTATAAATTCAGGGGAGGGATTCATAGGAGATATATGATTTAAAAATCCAGTTAGTTTGTCCTTTGTAAGCTGTGTTGCGAATCTCAACTCAATAAAATGCAGTGCACCTAGGTTCTTGACAAGTCACTCAAAGAGGATATTATCCAATTGTTATCGAGCTGCAGAATTGAGAAGAAAGCTAAAACCATATGGGTTAATGCAGTGAAGACATTCTCCTGGGGTACTAGTGAATACAGGAGTCACAAACGATAAGTTTGTTCATTATTGGATTATCACAATCAGTAAACAATGGGACAATTCGAGGGTTAGAGTTAATTGTCAATAATATAGTAAATTGCAGGCGATTGACATTCTGGAATTTTTTCTTCATCAGTGAATTTTGTATTTTGTATTTTTTTTAATCTCACGTTCTTTCCTTTAGAGTTCCATTTGGATTTTTATGATTCTAGATGAACATACCCAGCTTTATTGACTTCTATTTTGCTCGTTATCTGAAATCGTGTTTATTAAGTAAGAAATTTGATGCGTTTGCTACATTTTCTTCTTTCTGCAGTCATTGCTTGTTTTTGCTAAGCCACTCAAATTTGCTGTCCTATTTACATTTGGCAATGTTTTAGCCGTCGGAAGGTACAACCAATTAAATTAGAAAGCTGTTGTTGTTACATTCTACATGTGTCGGCAATTAAGAATTATTATTTGGAGGCGCACTTTTGTTCACTTTCACGGCATTCTGGCTTGCATCTAATACTTCTTGTTATCTTCGATCTCATATTCTTTCAAGAAGAAGTTTATTTGTGTACAAACAAAAGGAAGATAATCGAGGGGGGAAACTTTTAATGTACTTTCACTATGTTGTTCCTTTTCATTGAGGTGTTGATATTCTAAATTGCATCTTATTTGGCAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGACTGATGTTTGATTCTGTCCGTATTTATGCGACAGCTATTTACCTGGGATGTGTTGTTCTATCTCTTATATGTGCTCTTGGGGTACGTAACGATTCTGACTATATGACATTAGAAGGAAAAACAGACTTAAATTACTAAGGCATTGAGATATTCAATGAACACTCTTCAATTTATCTGTGGAACACAGTACTAATGGCGTTTCCAATTAGGTCCCTCTTCATCTGTTCCACAAGGTTTCCAAATACAGTTCTAGCATTGTTTTTCTTTAGCAAACAAAGCATGTATCGGCCTGGGATGGACTTCTGCAAACAGTTAATGCCTCATATTTAGTCTTTTAAATGAGTTTCCTTGCTATTCATTTTTCAGATCCACAATAAGATCTTGACAGTGATTGCAATGATAAGTGAGATATGTGCACTCATATGGTACGTTTACCTTTATCATTGGCATTCCTCCATTCGATTCAAATTTCATTTAAAACTAGAGGATGAAAACTTTCCCACTGGATGAAAATGTGTTCAATTATATCTTGCGAGACCTATCTTGAATCGAAACTAGATTCGGCCATGACTTCCTCGGTTTATTCTGTTCCAGGTATACTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAAATGATGAAACGATTTTGTGACACAGAACTATAGACAATGAAAGTTGCGGTGATGATTGATGATTCGGTGTCTTCAAGATATGGGACTGCCTTTTGTCTTCATTGTTTTTACATTTTAGTGAGCACAAGATCAGTTGGAGATTTTTTTTTTTTTTTTTTTTTTTGGTTGGAGTTGATTTGTCCACGAACACGTATAATCCAACGCCAGTTCAATGCTTGTGCTAAATTTCTAAATATAACATCATTCTTTTCTCCAAATTAACTCAAGGTACTTCTCTCTTTTTATATCTCAATGGGAAGTATTTTCCAGGTAAAGCCAAGTCAGAGCGTTTAGAATGGAAGTAGGGAGCCCACTCGTCATGCAATATGCTTCAGCTTATTATCTGTTGAAGCCATTAAACCACAGATCCAAAATCAGAAAAACTGAGTCATTCTCCAGGTTAGCATCAACATGTACTTTTTCTAAAGATGTTGATTTGACCCTTTACATGAAATTTCTACATTATTCCATGTTCAACTACCTCTTAATAATAAATTCAAAATGCTGAAGTCTTAGGCTAAAATATTTTTGTTCTTTTATACACATTCTTAACATTGAAAACCACAGACAACCAACATCAATGGACAAGGAAAAGGGAAAAAAAACAAGGGTAGAAATAAACAGGCTTGTTAGAAAGCCTGTCTTTCCTTTCCTGAATGTCTTGCCATCTAGCATACCTTTCAGTCAGACACATACACGTAATGATATTTCATTTAGGTTAACTGCTGGGCTGCAAACCCATAAAAATCAACAGCAAAGGAAATCAGATCAGAGCTTCGAGGTTTTGGCTATATTTTAATGGCCACTTGCCAATTAGGTTCTGAAAGTGAAATCCAGAGGTATCATGCTTGTGTGATCTGTTACGACTGAAGAATTTATTAAATATTTGTATATGACCCAAACCTTACATCATAACACCATGTGGAAAACTTTTCCACCTACCTACCCATGTGGGGGATTTTTCCTTCTTCAACTACCAAACCTTTCTCTTCCAAGTTGATGAAACTGTCTTTTTAATTATTGGCATAAACTCACTACATTCAAGGTAACACATGTCTGCTATACTATGCATATGGCCCATGTTACACATGCATTTTACCACAATGCCCTTCTCTGATAATGATGTAGGCTCTAATGCTTTAACCTTTAGTGGAGCTTGTTCTGTGGGAAATCTGATTGTGTCTTTTGAATCTTTTGGACTATATGAAACTTCTGCGAGGTTGGGGGAGGAGCAGGGGCATGGGAATCAATTGTTTGACCTGTGATTACAAAAAAGTTGGATGCTTTTTTTGCATTTTGGACAGATGGTTGGGCTATCAGTGTCTAAACGTGAAAAACAAATGCACTATGTAGAAAGAATCTCTTTGGTTTTGGTGGGGAGGGAGTGGATCTGCCTCCACTCTCTTTGAATCTTTTAGATTAATATATACATACAACAATTGAAAAGGGGTTTTGATTTCAAACCCAGATCATATGTTAAGCCTCAAGATTTTGAACAATCTTGGCTGTTTGAGGAACAGAAAAAAAACAATGAAGTGAGCTCATCCCATTAATTCTGTTTGATAGGAACACAATATATGTGTAGTGGCAAAGAAACTGTGTGATAGAGAAGAAGATAAGTTTAAAGATAATTGGATGAGTGGCTGTGGTTGCAAAACTTGAAAAATAGACAGTGCAACCAATACTGGAAATGTGGTACCTTTCTTTCTCCTTCCTTTTCTTTGTCTTTGCCTCTTGTTGCCCTCCACTTTTTGGTGTTTGTCCTCCTGATGAATGCATGTGCTCTGTTTGGCTGTTCTCTTTTTCTGGAAGCACTTGTCTTCTTTTCTCTTTTTCCAGTTTTATGGAAACTGAAACATCAAATTGTTATTAATAAACACACAC

mRNA sequence

ATGTGGAGGAATTCCAGCCGAGACGTATTTGTCGACGACGAAGAGTGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCCCTAACTCCTGTACAGAGACTTTACGGTTTTGGAGGCTGCTTGATCGGGGGCGTGGATTTCATGATTTTGGAGTCACAAACGATAAGTTTGTTCATTATTGGATTATCACAATCAGTAAACAATGGGACAATTCGAGGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGACTGATGTTTGATTCTGTCCGTATTTATGCGACAGCTATTTACCTGGGATGTGTTGTTCTATCTCTTATATGTGCTCTTGGGATCCACAATAAGATCTTGACAGTGATTGCAATGATAAGTGAGATATGTGCACTCATATGGTATACTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAAATGATGAAACGATTTTGTGACACAGAACTATAGACAATGAAAGTTGCGGTGATGATTGATGATTCGGTGTCTTCAAGATATGGGACTGCCTTTTGTCTTCATTGTTTTTACATTTTAGTGAGCACAAGATCAGTTGGAGATTTTTTTTTTTTTTTTTTTTTTTGGTTGGAGTTGATTTGTCCACGAACACGTATAATCCAACGCCAGTTCAATGCTTGTGCTAAATTTCTAAATATAACATCATTCTTTTCTCCAAATTAACTCAAGGTACTTCTCTCTTTTTATATCTCAATGGGAAGTATTTTCCAGGTAAAGCCAAGTCAGAGCGTTTAGAATGGAAGTAGGGAGCCCACTCGTCATGCAATATGCTTCAGCTTATTATCTGTTGAAGCCATTAAACCACAGATCCAAAATCAGAAAAACTGAGTCATTCTCCAGGTTAACTGCTGGGCTGCAAACCCATAAAAATCAACAGCAAAGGAAATCAGATCAGAGCTTCGAGGTTTTGGCTATATTTTAATGGCCACTTGCCAATTAGGTTCTGAAAGTGAAATCCAGAGGTATCATGCTTGTGTGATCTGTTACGACTGAAGAATTTATTAAATATTTGTATATGACCCAAACCTTACATCATAACACCATGTGGAAAACTTTTCCACCTACCTACCCATGTGGGGGATTTTTCCTTCTTCAACTACCAAACCTTTCTCTTCCAAGTTGATGAAACTGTCTTTTTAATTATTGGCATAAACTCACTACATTCAAGGTAACACATGTCTGCTATACTATGCATATGGCCCATGTTACACATGCATTTTACCACAATGCCCTTCTCTGATAATGATGTAGGCTCTAATGCTTTAACCTTTAGTGGAGCTTGTTCTGTGGGAAATCTGATTGTGTCTTTTGAATCTTTTGGACTATATGAAACTTCTGCGAGGTTGGGGGAGGAGCAGGGGCATGGGAATCAATTGTTTGACCTGTGATTACAAAAAAGTTGGATGCTTTTTTTGCATTTTGGACAGATGGTTGGGCTATCAGTGTCTAAACGTGAAAAACAAATGCACTATGTAGAAAGAATCTCTTTGGTTTTGGTGGGGAGGGAGTGGATCTGCCTCCACTCTCTTTGAATCTTTTAGATTAATATATACATACAACAATTGAAAAGGGGTTTTGATTTCAAACCCAGATCATATGTTAAGCCTCAAGATTTTGAACAATCTTGGCTGTTTGAGGAACAGAAAAAAAACAATGAAGTGAGCTCATCCCATTAATTCTGTTTGATAGGAACACAATATATGTGTAGTGGCAAAGAAACTGTGTGATAGAGAAGAAGATAAGTTTAAAGATAATTGGATGAGTGGCTGTGGTTGCAAAACTTGAAAAATAGACAGTGCAACCAATACTGGAAATGTGGTACCTTTCTTTCTCCTTCCTTTTCTTTGTCTTTGCCTCTTGTTGCCCTCCACTTTTTGGTGTTTGTCCTCCTGATGAATGCATGTGCTCTGTTTGGCTGTTCTCTTTTTCTGGAAGCACTTGTCTTCTTTTCTCTTTTTCCAGTTTTATGGAAACTGAAACATCAAATTGTTATTAATAAACACACAC

Coding sequence (CDS)

ATGTGGAGGAATTCCAGCCGAGACGTATTTGTCGACGACGAAGAGTGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCCCTAACTCCTGTACAGAGACTTTACGGTTTTGGAGGCTGCTTGATCGGGGGCGTGGATTTCATGATTTTGGAGTCACAAACGATAAGTTTGTTCATTATTGGATTATCACAATCAGTAAACAATGGGACAATTCGAGGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGACTGATGTTTGATTCTGTCCGTATTTATGCGACAGCTATTTACCTGGGATGTGTTGTTCTATCTCTTATATGTGCTCTTGGGATCCACAATAAGATCTTGACAGTGATTGCAATGATAAGTGAGATATGTGCACTCATATGGTATACTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAAATGATGAAACGATTTTGTGACACAGAACTATAG

Protein sequence

MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTISLFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL
BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2A_HUMAN (Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.6e-12
Identity = 53/143 (37.06%), Postives = 74/143 (51.75%), Query Frame = 1

Query: 12  DDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQT------ISLFIIGL 71
           DDEE G   L     D  SL+   RL  F  C + GV F IL +        I LF +  
Sbjct: 12  DDEEQG---LTAQVLDASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGGIKLFAVFY 71

Query: 72  SQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVIA 131
           +   N   +  T FL GP +Q++ MF++ R+ AT + L C + +L  AL  H K L V+ 
Sbjct: 72  TLG-NLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLF 131

Query: 132 MISEICALIWYTLSYIPFARRMV 149
            I +  ++ WY+LSYIP+AR  V
Sbjct: 132 CILQFLSMTWYSLSYIPYARDAV 150

BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2A_RAT (Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-11
Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 1

Query: 12  DDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILES------QTISLFIIGL 71
           DDEE G   L     D  SL+   RL  F  C + G+ F IL +        + LF +  
Sbjct: 12  DDEEQG---LTAQVLDASSLSFNTRLKWFVICFVAGIFFSILGTGLLWLPNGVKLFAVFY 71

Query: 72  SQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVIA 131
           +   N   +  T FL GP +Q++ MF++ R+ AT I L C+V +L  AL    K L ++ 
Sbjct: 72  TLG-NLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLF 131

Query: 132 MISEICALIWYTLSYIPFARRMV 149
            I +  ++ WY+LSYIP+AR  V
Sbjct: 132 CILQFLSMTWYSLSYIPYARDAV 150

BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2A_MOUSE (Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10
Identity = 50/143 (34.97%), Postives = 73/143 (51.05%), Query Frame = 1

Query: 12  DDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTI------SLFIIGL 71
           DDEE G   L     D  SL+   RL  F  C + G+ F  L +  +       LF +  
Sbjct: 12  DDEEQG---LTAQVLDASSLSFNTRLKWFVICFVAGIFFSFLGTGLLWLPNGMKLFAVFY 71

Query: 72  SQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVIA 131
           +   N   +  T FL GP +Q++ MF++ R+ AT I L C+V +L  AL    K L ++ 
Sbjct: 72  TLG-NLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLF 131

Query: 132 MISEICALIWYTLSYIPFARRMV 149
            I +  ++ WY+LSYIP+AR  V
Sbjct: 132 CILQFLSMTWYSLSYIPYARDAV 150

BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2B_HUMAN (Vesicle transport protein SFT2B OS=Homo sapiens GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10
Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 1

Query: 20  LLDEDSEDLCSLTPV---------QRLYGFGGCLIGGVDFMILESQTI-----SLFIIGL 79
           L  +D+ED   L+ V          R+ GF  C   G+   +L +  +      L +  +
Sbjct: 8   LSGQDTEDRSGLSEVVEASSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPRKGLHLFAV 67

Query: 80  SQSVNN-GTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVI 139
             +  N  +I  T FL GP +Q++ MF+  R+ AT + L C  L+L  A   HNK L +I
Sbjct: 68  FYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGLALI 127

Query: 140 AMISEICALIWYTLSYIPFARRMVSE 151
             I +  AL WY+LS+IPFAR  V +
Sbjct: 128 FCILQSLALTWYSLSFIPFARDAVKK 153

BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2B_MOUSE (Vesicle transport protein SFT2B OS=Mus musculus GN=Sft2d2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09
Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 1

Query: 20  LLDEDSEDLCSLTPV---------QRLYGFGGCLIGGVDFMILES-------QTISLFII 79
           L  +D+ED   L+ V          R+ GF  C   G+   +L +       + + LF +
Sbjct: 8   LSGQDTEDRSGLSEVVEASSLSWGTRIKGFIACFALGILCSVLGTLLLWVPRKGLGLFAV 67

Query: 80  GLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTV 139
             +   N  +I  T FL GP +Q++ MF+  R+ AT + L C  L+L C+  + NK L +
Sbjct: 68  FYTLG-NIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVLLCFALTL-CSAFLWNKGLAL 127

Query: 140 IAMISEICALIWYTLSYIPFARRMVSE 151
           I  I +  AL WY+LSYIP+AR  V +
Sbjct: 128 IFCILQSLALTWYSLSYIPYARDAVKK 152

BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: A0A0A0LC39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603050 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49
Identity = 115/162 (70.99%), Postives = 126/162 (77.78%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTIS- 60
           MW+  S  VFVD+E   QSLLDEDSEDLCSLT VQRLY FGGCL GGV  MIL     + 
Sbjct: 1   MWK-LSEGVFVDEER-SQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAK 60

Query: 61  -LFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHN 120
            L +  L    N   +  T FLFGP QQIR+MFDSVRI ATAIYLGCVVL+LICAL IHN
Sbjct: 61  PLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHN 120

Query: 121 KILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           KILTVIA+ISEICALIWY+LSYIPFARRMVS++M RFCDTEL
Sbjct: 121 KILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 160

BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: B7FHE2_MEDTR (Got1/SFT2-like vescicle transporter family protein OS=Medicago truncatula GN=MTR_1g026920 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-39
Identity = 91/167 (54.49%), Postives = 114/167 (68.26%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTIS- 60
           MW+     +  D+EE  +SLL E S  L SLT  QR+YGF  CLI G+  M+L     + 
Sbjct: 1   MWKKLGESLSGDNEEQEESLLGEGSGGLSSLTTTQRMYGFAACLIAGLALMLLSMIVFAK 60

Query: 61  ------LFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICA 120
                 LF  G     N   +  TAFL GP QQ+ +MFD VR++ATAIYLGCVV++LICA
Sbjct: 61  PIKFAVLFTFG-----NLSAVGSTAFLLGPAQQMEMMFDPVRVFATAIYLGCVVIALICA 120

Query: 121 LGIHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           L IH+K+LT++A+I EICAL+WY+LSYIPFARRMVSE+M R CDTEL
Sbjct: 121 LLIHSKVLTLLAIIIEICALMWYSLSYIPFARRMVSELMIRLCDTEL 162

BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: V7CXA0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G078100g PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-38
Identity = 91/165 (55.15%), Postives = 118/165 (71.52%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTISL 60
           MW  + R +   DEE G+SLL EDS  LCSL+  QR+YGF  C + GV  M+L   ++ +
Sbjct: 1   MW--NIRSLTGGDEEQGESLLGEDSGGLCSLSTTQRIYGFAACFVAGVACMLL---SMIV 60

Query: 61  FIIGLSQSV-----NNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALG 120
           F+  +  +V     N   +  T FL GP QQ+ +MFD VR++ATAIYLGCVV++LICAL 
Sbjct: 61  FVKPMKFAVLFTFGNLLAVGSTGFLLGPAQQLGMMFDPVRVFATAIYLGCVVIALICALW 120

Query: 121 IHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           IH+K+LT++A+I EI ALIWY+LSYIPFARRMVSE+M R CDTEL
Sbjct: 121 IHSKVLTIVAVIVEIGALIWYSLSYIPFARRMVSELMIRLCDTEL 160

BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: A0A059DEZ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01469 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-38
Identity = 89/165 (53.94%), Postives = 119/165 (72.12%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTISL 60
           MW+  S+ +F  +EE    +L EDS+ +CSL+P+QR+Y FG CL+ G+  M L   ++ +
Sbjct: 1   MWK-LSQSLFGGEEEGQDEVLAEDSDGICSLSPMQRVYAFGACLLVGLVCMFL---SLIV 60

Query: 61  FIIGLSQSV-----NNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALG 120
           F   +  +V     N   +  T FL G  QQ+R+MFDS R++ATAIYLGCV L+LICAL 
Sbjct: 61  FAKPIKFAVVFTCGNLLAVGSTVFLIGAAQQMRMMFDSTRVFATAIYLGCVALALICALW 120

Query: 121 IHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           IH+K+LT+IA+I EICALIWY+LSYIPFARRMVS++M R CDTEL
Sbjct: 121 IHSKVLTIIAIIIEICALIWYSLSYIPFARRMVSDLMVRLCDTEL 161

BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: A0A0S3RN16_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G190300 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.4e-38
Identity = 91/165 (55.15%), Postives = 118/165 (71.52%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTISL 60
           MW N  R + V +EE G+SLL EDS  LCSL+  QR+YGF    + GV  M+L   ++ +
Sbjct: 1   MW-NIGRSLTVGNEEEGESLLGEDSGGLCSLSTTQRIYGFAASFVAGVVCMLL---SMIV 60

Query: 61  FIIGLSQSV-----NNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALG 120
           F+  +  +V     N   +  T FL GP QQ+ +MFD VR++ATAIYLGCVV++LICAL 
Sbjct: 61  FVKPIKFAVLFTFGNLLAVGSTGFLLGPAQQLGMMFDPVRVFATAIYLGCVVIALICALW 120

Query: 121 IHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           IH+K+LT++A+I EI ALIWY+LSYIPFARRMVSE+M R CDTEL
Sbjct: 121 IHSKVLTIVAVIIEIGALIWYSLSYIPFARRMVSELMIRLCDTEL 161

BLAST of Cp4.1LG14g06820 vs. TAIR10
Match: AT5G24170.1 (AT5G24170.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-36
Identity = 83/156 (53.21%), Postives = 105/156 (67.31%), Query Frame = 1

Query: 12  DDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTISLFIIGLSQSV-- 71
           D +    S L++ SE LC+L+  QR+YGF   L  G+  M L     S+ + G+      
Sbjct: 13  DGDGTTDSFLEDGSEGLCALSTTQRMYGFAASLATGLLLMFL-----SMIVFGIPIKFAL 72

Query: 72  -----NNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVI 131
                N   I  TAFL GP QQ+ +MFD VR  AT+IY+GCVV++LICAL IH+KILTV+
Sbjct: 73  LFTFGNVLAIGSTAFLMGPEQQMSMMFDPVRFLATSIYIGCVVVALICALLIHSKILTVL 132

Query: 132 AMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           A++ EICALIWY+LSYIPFARRMVSE+M R CDTEL
Sbjct: 133 AILCEICALIWYSLSYIPFARRMVSEIMIRLCDTEL 163

BLAST of Cp4.1LG14g06820 vs. TAIR10
Match: AT5G23550.1 (AT5G23550.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26
Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 1

Query: 13  DEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTISLFI-IGLSQSVNN 72
           DEE   S + ED    C+LT  QR YGF  CL  G+   +L        +  G++ ++ N
Sbjct: 27  DEESSLSFM-EDLNRNCALTTKQRFYGFAICLSAGLTCTLLSMLVFFNPVKFGITFTLGN 86

Query: 73  GTIRG-TAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVIAMISEI 132
               G TAFL GP +Q+ +M D  RIYATA+YL  ++++L CAL + NK+LT++A+I E 
Sbjct: 87  LMALGSTAFLIGPQRQVTMMLDPARIYATALYLASIIIALFCALYVRNKLLTLLAIILEF 146

Query: 133 CALIWYTLSYIPFARRMVSEMMKRFCDTE 160
             LIWY+LSYIPFAR MVS++     DTE
Sbjct: 147 TGLIWYSLSYIPFARTMVSKIFMTCFDTE 174

BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|659082018|ref|XP_008441622.1| (PREDICTED: vesicle transport protein SFT2B [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-54
Identity = 121/167 (72.46%), Postives = 130/167 (77.84%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTIS- 60
           MW+ S   VFVDDEE  QSLLDEDSEDLCSLTPVQRLY FGGCL GGV  MIL     + 
Sbjct: 1   MWKLSD-GVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILSLLVFAK 60

Query: 61  ------LFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICA 120
                 LF  G     N   +  TAFLFGPGQQIR+MFDSVRI+ATAIYLGCVVL+LICA
Sbjct: 61  PLKFAVLFTFG-----NVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICA 120

Query: 121 LGIHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           L IHNKILTV AMISEICALIWY+LSYIPFARRMVS++M RFCDTEL
Sbjct: 121 LWIHNKILTVFAMISEICALIWYSLSYIPFARRMVSQLMVRFCDTEL 161

BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|449455944|ref|XP_004145710.1| (PREDICTED: vesicle transport protein SFT2B [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 1.8e-49
Identity = 115/162 (70.99%), Postives = 126/162 (77.78%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTIS- 60
           MW+  S  VFVD+E   QSLLDEDSEDLCSLT VQRLY FGGCL GGV  MIL     + 
Sbjct: 1   MWK-LSEGVFVDEER-SQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAK 60

Query: 61  -LFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHN 120
            L +  L    N   +  T FLFGP QQIR+MFDSVRI ATAIYLGCVVL+LICAL IHN
Sbjct: 61  PLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHN 120

Query: 121 KILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           KILTVIA+ISEICALIWY+LSYIPFARRMVS++M RFCDTEL
Sbjct: 121 KILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 160

BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|1009122809|ref|XP_015878202.1| (PREDICTED: vesicle transport protein SFT2B [Ziziphus jujuba])

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 93/167 (55.69%), Postives = 119/167 (71.26%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTIS- 60
           MW+  ++ +   D++  +S  D++S+ LCSL+  QR+YGF  CL  G+  MIL     + 
Sbjct: 1   MWQKLNQSLSGVDDDGRESFFDDESDGLCSLSATQRMYGFAACLSAGLVLMILSLIVFAK 60

Query: 61  ------LFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICA 120
                 LF  G     N   +  TAFL G GQQ+R+MFDSVRIYATAIYLGCVV++LICA
Sbjct: 61  PIKFAILFTFG-----NVLAVGSTAFLLGLGQQMRMMFDSVRIYATAIYLGCVVIALICA 120

Query: 121 LGIHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           L IH+KILT++A+ISEICAL WY+LSYIPFARRMVSE+M R+CDTEL
Sbjct: 121 LWIHSKILTIVAIISEICALFWYSLSYIPFARRMVSELMIRWCDTEL 162

BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|645258117|ref|XP_008234734.1| (PREDICTED: vesicle transport protein SFT2B [Prunus mume])

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40
Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTIS- 60
           MW   ++ +   +EE G+  LDE+S+  C+L+  QR+YGF  CL+ G+  M L     + 
Sbjct: 1   MWAKLNQSMLEGNEEGGEGFLDEESDGFCALSATQRMYGFAACLLAGLVCMFLSLIVFAK 60

Query: 61  ------LFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICA 120
                 LF  G     N   +  TAFLFGPGQQ+R+MFDSVR+YATAIYLGCVV++LICA
Sbjct: 61  PIKFAVLFTFG-----NLLAVGSTAFLFGPGQQMRMMFDSVRVYATAIYLGCVVIALICA 120

Query: 121 LGIHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           L IH+KILT+IA+I E+CALIWY+LSYIPFARR+VS +M R  DTEL
Sbjct: 121 LWIHSKILTIIAIICEVCALIWYSLSYIPFARRIVSNLMIRLFDTEL 162

BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|694321715|ref|XP_009352013.1| (PREDICTED: vesicle transport protein SFT2B [Pyrus x bretschneideri])

HSP 1 Score: 172.2 bits (435), Expect = 7.5e-40
Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 1

Query: 1   MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTIS- 60
           MW   ++    D+EE G+SLLDE+SE L +L+  QR+Y F  C + G+  M L     + 
Sbjct: 1   MWGKLNQSTLGDNEEGGESLLDEESEGLFNLSATQRMYAFAACFLAGMLCMFLSMIVFAK 60

Query: 61  ------LFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICA 120
                 LF  G     N   +  TAFLFGP +Q+R+MFD+VR++ATAIYLGCVVL+LICA
Sbjct: 61  PIKFAVLFTFG-----NLLAVGSTAFLFGPARQMRMMFDTVRVFATAIYLGCVVLALICA 120

Query: 121 LGIHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL 161
           L I +KILT+IA+I EICALIWY+LSYIPFARRMVSE+M R CDTEL
Sbjct: 121 LLIRSKILTIIAIICEICALIWYSLSYIPFARRMVSELMIRLCDTEL 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SFT2A_HUMAN6.6e-1237.06Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1[more]
SFT2A_RAT5.6e-1135.66Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1[more]
SFT2A_MOUSE2.8e-1034.97Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=1 SV=1[more]
SFT2B_HUMAN4.7e-1033.56Vesicle transport protein SFT2B OS=Homo sapiens GN=SFT2D2 PE=1 SV=1[more]
SFT2B_MOUSE5.2e-0933.33Vesicle transport protein SFT2B OS=Mus musculus GN=Sft2d2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LC39_CUCSA1.2e-4970.99Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603050 PE=4 SV=1[more]
B7FHE2_MEDTR2.6e-3954.49Got1/SFT2-like vescicle transporter family protein OS=Medicago truncatula GN=MTR... [more]
V7CXA0_PHAVU2.2e-3855.15Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G078100g PE=4 SV=1[more]
A0A059DEZ9_EUCGR3.7e-3853.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01469 PE=4 SV=1[more]
A0A0S3RN16_PHAAN6.4e-3855.15Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G190300 PE=... [more]
Match NameE-valueIdentityDescription
AT5G24170.14.1e-3653.21 Got1/Sft2-like vescicle transport protein family[more]
AT5G23550.12.9e-2644.97 Got1/Sft2-like vescicle transport protein family[more]
Match NameE-valueIdentityDescription
gi|659082018|ref|XP_008441622.1|4.1e-5472.46PREDICTED: vesicle transport protein SFT2B [Cucumis melo][more]
gi|449455944|ref|XP_004145710.1|1.8e-4970.99PREDICTED: vesicle transport protein SFT2B [Cucumis sativus][more]
gi|1009122809|ref|XP_015878202.1|1.2e-4055.69PREDICTED: vesicle transport protein SFT2B [Ziziphus jujuba][more]
gi|645258117|ref|XP_008234734.1|1.5e-4054.49PREDICTED: vesicle transport protein SFT2B [Prunus mume][more]
gi|694321715|ref|XP_009352013.1|7.5e-4055.69PREDICTED: vesicle transport protein SFT2B [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0016192vesicle-mediated transport
Vocabulary: INTERPRO
TermDefinition
IPR011691Vesicle_transpt_SFT2
IPR007305Vesicle_transpt_Got1/SFT2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0006810 transport
biological_process GO:0015031 protein transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g06820.1Cp4.1LG14g06820.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 73..152
score: 1.5
IPR011691Vesicle transport protein, SFT2-likePANTHERPTHR23137UNCHARACTERIZEDcoord: 18..160
score: 7.9

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g06820Cp4.1LG09g00370Cucurbita pepo (Zucchini)cpecpeB023