Cp4.1LG14g06820 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAGGAATTCCAGCCGAGACGTATTTGTCGACGACGAAGAGTGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCCCTAACTCCTGTACAGGTACTTCAAACAACCACCACAGAGCTCCGCTTGTGGAAAGTCTTATGGCTTTTGCTCTAGTTTTTCTTTTTGTTCGGTTTTCATACTGTTTTGGTCTTTTGCTGATCAGAGACTTTACGGTTTTGGAGGCTGCTTGATCGGGGGCGTGGATTTCATGATTTTGGTATGAATGAACATTTAACCTACCTCTACTTCTAATGCAATTTCATATGTGTTTATGTCATATGCATCTTCTGTATATGGGGAACTTTGATGATAATTTTGGATTTGAGCCTCAAGTTACGATCTGGGTAGGATTGGTAACGGGAGGTTTTCTTTATTTCCATTATTATTTTGGAATTTAATAGGATTTATATTATCTAACTATCCACTGGTTGGTCCTTGAGGCTTCCAGAATAAATTGGAAAACACAACAAAGAAGGAAGCCGGGATTGAATTTGGATAGAAAGCTGAGGAATTTCCTTTAAGAAGGGAATACTAAAGACAAATTAAGTCGCCAGGTCAATTGGGAGATTGTTTCTACCAATCGAAAATGGGGGACTCTTGATTGGGTATAAGGAAGAAAGTAGGACATTAAATATCAAAAGGATATGGCGACTTTTACCAACTCTGATGAATCGATGGGAGAGTAAGTGGATGTTTTACAAGTAAGGGGGATTGGGTGCTACTGCTGTCAAAGTCCATGGTCTAATATTACAAAACTGAGATGATTTATTGAGGCATCCACTAGCATTGATTTGGCAAATTTAAGGAAAACCTTGTGTTTAGAGAGACTACTGGGTAGAGTAGTCATCTCTGTTGGCAAGATTTTTAAGGTTGTTTATAGCTTCACCATATAGAAAAGGATCATATCAAATGGATATGGCGGCTTTCTGACTTTGATGAATCGTGGAATGGGATTCTATCCAGTACATAAGGGAGAATACCAAGGATGTTTTATAAGTAGGGAGCGTTGGGGACTACTGTTATCAAAGTCCATGGTCCAATATTACAAAACTGAGATGATTTATAGAGGGATTGACTGGCATTGAGGTGGCAAATTGAAGGAGAACCTTATTCTATAGAGTCCGCTGGGTAGGGGAGTCATCTCTGTTGGCAAGATTTTTAAGGTGTTTGTAGCTTCACCAAATAGAAAATGACAATAAGTAAAGCATGGGAGGATGTTCTTTGAACATGACAACCACTAAGGACATAACTGATCCGGAAATGGGTATTGAGAAAGGAGTTGTCTACAGCAATCTAGAAGGAAAGAATCCCTAAGGAAGTCAACTTCTTTATGTGGACATTATGTCATGATGGTATAAATTCAGGGGAGGGATTCATAGGAGATATATGATTTAAAAATCCAGTTAGTTTGTCCTTTGTAAGCTGTGTTGCGAATCTCAACTCAATAAAATGCAGTGCACCTAGGTTCTTGACAAGTCACTCAAAGAGGATATTATCCAATTGTTATCGAGCTGCAGAATTGAGAAGAAAGCTAAAACCATATGGGTTAATGCAGTGAAGACATTCTCCTGGGGTACTAGTGAATACAGGAGTCACAAACGATAAGTTTGTTCATTATTGGATTATCACAATCAGTAAACAATGGGACAATTCGAGGGTTAGAGTTAATTGTCAATAATATAGTAAATTGCAGGCGATTGACATTCTGGAATTTTTTCTTCATCAGTGAATTTTGTATTTTGTATTTTTTTTAATCTCACGTTCTTTCCTTTAGAGTTCCATTTGGATTTTTATGATTCTAGATGAACATACCCAGCTTTATTGACTTCTATTTTGCTCGTTATCTGAAATCGTGTTTATTAAGTAAGAAATTTGATGCGTTTGCTACATTTTCTTCTTTCTGCAGTCATTGCTTGTTTTTGCTAAGCCACTCAAATTTGCTGTCCTATTTACATTTGGCAATGTTTTAGCCGTCGGAAGGTACAACCAATTAAATTAGAAAGCTGTTGTTGTTACATTCTACATGTGTCGGCAATTAAGAATTATTATTTGGAGGCGCACTTTTGTTCACTTTCACGGCATTCTGGCTTGCATCTAATACTTCTTGTTATCTTCGATCTCATATTCTTTCAAGAAGAAGTTTATTTGTGTACAAACAAAAGGAAGATAATCGAGGGGGGAAACTTTTAATGTACTTTCACTATGTTGTTCCTTTTCATTGAGGTGTTGATATTCTAAATTGCATCTTATTTGGCAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGACTGATGTTTGATTCTGTCCGTATTTATGCGACAGCTATTTACCTGGGATGTGTTGTTCTATCTCTTATATGTGCTCTTGGGGTACGTAACGATTCTGACTATATGACATTAGAAGGAAAAACAGACTTAAATTACTAAGGCATTGAGATATTCAATGAACACTCTTCAATTTATCTGTGGAACACAGTACTAATGGCGTTTCCAATTAGGTCCCTCTTCATCTGTTCCACAAGGTTTCCAAATACAGTTCTAGCATTGTTTTTCTTTAGCAAACAAAGCATGTATCGGCCTGGGATGGACTTCTGCAAACAGTTAATGCCTCATATTTAGTCTTTTAAATGAGTTTCCTTGCTATTCATTTTTCAGATCCACAATAAGATCTTGACAGTGATTGCAATGATAAGTGAGATATGTGCACTCATATGGTACGTTTACCTTTATCATTGGCATTCCTCCATTCGATTCAAATTTCATTTAAAACTAGAGGATGAAAACTTTCCCACTGGATGAAAATGTGTTCAATTATATCTTGCGAGACCTATCTTGAATCGAAACTAGATTCGGCCATGACTTCCTCGGTTTATTCTGTTCCAGGTATACTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAAATGATGAAACGATTTTGTGACACAGAACTATAGACAATGAAAGTTGCGGTGATGATTGATGATTCGGTGTCTTCAAGATATGGGACTGCCTTTTGTCTTCATTGTTTTTACATTTTAGTGAGCACAAGATCAGTTGGAGATTTTTTTTTTTTTTTTTTTTTTTGGTTGGAGTTGATTTGTCCACGAACACGTATAATCCAACGCCAGTTCAATGCTTGTGCTAAATTTCTAAATATAACATCATTCTTTTCTCCAAATTAACTCAAGGTACTTCTCTCTTTTTATATCTCAATGGGAAGTATTTTCCAGGTAAAGCCAAGTCAGAGCGTTTAGAATGGAAGTAGGGAGCCCACTCGTCATGCAATATGCTTCAGCTTATTATCTGTTGAAGCCATTAAACCACAGATCCAAAATCAGAAAAACTGAGTCATTCTCCAGGTTAGCATCAACATGTACTTTTTCTAAAGATGTTGATTTGACCCTTTACATGAAATTTCTACATTATTCCATGTTCAACTACCTCTTAATAATAAATTCAAAATGCTGAAGTCTTAGGCTAAAATATTTTTGTTCTTTTATACACATTCTTAACATTGAAAACCACAGACAACCAACATCAATGGACAAGGAAAAGGGAAAAAAAACAAGGGTAGAAATAAACAGGCTTGTTAGAAAGCCTGTCTTTCCTTTCCTGAATGTCTTGCCATCTAGCATACCTTTCAGTCAGACACATACACGTAATGATATTTCATTTAGGTTAACTGCTGGGCTGCAAACCCATAAAAATCAACAGCAAAGGAAATCAGATCAGAGCTTCGAGGTTTTGGCTATATTTTAATGGCCACTTGCCAATTAGGTTCTGAAAGTGAAATCCAGAGGTATCATGCTTGTGTGATCTGTTACGACTGAAGAATTTATTAAATATTTGTATATGACCCAAACCTTACATCATAACACCATGTGGAAAACTTTTCCACCTACCTACCCATGTGGGGGATTTTTCCTTCTTCAACTACCAAACCTTTCTCTTCCAAGTTGATGAAACTGTCTTTTTAATTATTGGCATAAACTCACTACATTCAAGGTAACACATGTCTGCTATACTATGCATATGGCCCATGTTACACATGCATTTTACCACAATGCCCTTCTCTGATAATGATGTAGGCTCTAATGCTTTAACCTTTAGTGGAGCTTGTTCTGTGGGAAATCTGATTGTGTCTTTTGAATCTTTTGGACTATATGAAACTTCTGCGAGGTTGGGGGAGGAGCAGGGGCATGGGAATCAATTGTTTGACCTGTGATTACAAAAAAGTTGGATGCTTTTTTTGCATTTTGGACAGATGGTTGGGCTATCAGTGTCTAAACGTGAAAAACAAATGCACTATGTAGAAAGAATCTCTTTGGTTTTGGTGGGGAGGGAGTGGATCTGCCTCCACTCTCTTTGAATCTTTTAGATTAATATATACATACAACAATTGAAAAGGGGTTTTGATTTCAAACCCAGATCATATGTTAAGCCTCAAGATTTTGAACAATCTTGGCTGTTTGAGGAACAGAAAAAAAACAATGAAGTGAGCTCATCCCATTAATTCTGTTTGATAGGAACACAATATATGTGTAGTGGCAAAGAAACTGTGTGATAGAGAAGAAGATAAGTTTAAAGATAATTGGATGAGTGGCTGTGGTTGCAAAACTTGAAAAATAGACAGTGCAACCAATACTGGAAATGTGGTACCTTTCTTTCTCCTTCCTTTTCTTTGTCTTTGCCTCTTGTTGCCCTCCACTTTTTGGTGTTTGTCCTCCTGATGAATGCATGTGCTCTGTTTGGCTGTTCTCTTTTTCTGGAAGCACTTGTCTTCTTTTCTCTTTTTCCAGTTTTATGGAAACTGAAACATCAAATTGTTATTAATAAACACACAC ATGTGGAGGAATTCCAGCCGAGACGTATTTGTCGACGACGAAGAGTGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCCCTAACTCCTGTACAGAGACTTTACGGTTTTGGAGGCTGCTTGATCGGGGGCGTGGATTTCATGATTTTGGAGTCACAAACGATAAGTTTGTTCATTATTGGATTATCACAATCAGTAAACAATGGGACAATTCGAGGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGACTGATGTTTGATTCTGTCCGTATTTATGCGACAGCTATTTACCTGGGATGTGTTGTTCTATCTCTTATATGTGCTCTTGGGATCCACAATAAGATCTTGACAGTGATTGCAATGATAAGTGAGATATGTGCACTCATATGGTATACTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAAATGATGAAACGATTTTGTGACACAGAACTATAGACAATGAAAGTTGCGGTGATGATTGATGATTCGGTGTCTTCAAGATATGGGACTGCCTTTTGTCTTCATTGTTTTTACATTTTAGTGAGCACAAGATCAGTTGGAGATTTTTTTTTTTTTTTTTTTTTTTGGTTGGAGTTGATTTGTCCACGAACACGTATAATCCAACGCCAGTTCAATGCTTGTGCTAAATTTCTAAATATAACATCATTCTTTTCTCCAAATTAACTCAAGGTACTTCTCTCTTTTTATATCTCAATGGGAAGTATTTTCCAGGTAAAGCCAAGTCAGAGCGTTTAGAATGGAAGTAGGGAGCCCACTCGTCATGCAATATGCTTCAGCTTATTATCTGTTGAAGCCATTAAACCACAGATCCAAAATCAGAAAAACTGAGTCATTCTCCAGGTTAACTGCTGGGCTGCAAACCCATAAAAATCAACAGCAAAGGAAATCAGATCAGAGCTTCGAGGTTTTGGCTATATTTTAATGGCCACTTGCCAATTAGGTTCTGAAAGTGAAATCCAGAGGTATCATGCTTGTGTGATCTGTTACGACTGAAGAATTTATTAAATATTTGTATATGACCCAAACCTTACATCATAACACCATGTGGAAAACTTTTCCACCTACCTACCCATGTGGGGGATTTTTCCTTCTTCAACTACCAAACCTTTCTCTTCCAAGTTGATGAAACTGTCTTTTTAATTATTGGCATAAACTCACTACATTCAAGGTAACACATGTCTGCTATACTATGCATATGGCCCATGTTACACATGCATTTTACCACAATGCCCTTCTCTGATAATGATGTAGGCTCTAATGCTTTAACCTTTAGTGGAGCTTGTTCTGTGGGAAATCTGATTGTGTCTTTTGAATCTTTTGGACTATATGAAACTTCTGCGAGGTTGGGGGAGGAGCAGGGGCATGGGAATCAATTGTTTGACCTGTGATTACAAAAAAGTTGGATGCTTTTTTTGCATTTTGGACAGATGGTTGGGCTATCAGTGTCTAAACGTGAAAAACAAATGCACTATGTAGAAAGAATCTCTTTGGTTTTGGTGGGGAGGGAGTGGATCTGCCTCCACTCTCTTTGAATCTTTTAGATTAATATATACATACAACAATTGAAAAGGGGTTTTGATTTCAAACCCAGATCATATGTTAAGCCTCAAGATTTTGAACAATCTTGGCTGTTTGAGGAACAGAAAAAAAACAATGAAGTGAGCTCATCCCATTAATTCTGTTTGATAGGAACACAATATATGTGTAGTGGCAAAGAAACTGTGTGATAGAGAAGAAGATAAGTTTAAAGATAATTGGATGAGTGGCTGTGGTTGCAAAACTTGAAAAATAGACAGTGCAACCAATACTGGAAATGTGGTACCTTTCTTTCTCCTTCCTTTTCTTTGTCTTTGCCTCTTGTTGCCCTCCACTTTTTGGTGTTTGTCCTCCTGATGAATGCATGTGCTCTGTTTGGCTGTTCTCTTTTTCTGGAAGCACTTGTCTTCTTTTCTCTTTTTCCAGTTTTATGGAAACTGAAACATCAAATTGTTATTAATAAACACACAC ATGTGGAGGAATTCCAGCCGAGACGTATTTGTCGACGACGAAGAGTGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCCCTAACTCCTGTACAGAGACTTTACGGTTTTGGAGGCTGCTTGATCGGGGGCGTGGATTTCATGATTTTGGAGTCACAAACGATAAGTTTGTTCATTATTGGATTATCACAATCAGTAAACAATGGGACAATTCGAGGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGACTGATGTTTGATTCTGTCCGTATTTATGCGACAGCTATTTACCTGGGATGTGTTGTTCTATCTCTTATATGTGCTCTTGGGATCCACAATAAGATCTTGACAGTGATTGCAATGATAAGTGAGATATGTGCACTCATATGGTATACTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAAATGATGAAACGATTTTGTGACACAGAACTATAG MWRNSSRDVFVDDEECGQSLLDEDSEDLCSLTPVQRLYGFGGCLIGGVDFMILESQTISLFIIGLSQSVNNGTIRGTAFLFGPGQQIRLMFDSVRIYATAIYLGCVVLSLICALGIHNKILTVIAMISEICALIWYTLSYIPFARRMVSEMMKRFCDTEL
BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2A_HUMAN (Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.6e-12 Identity = 53/143 (37.06%), Postives = 74/143 (51.75%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2A_RAT (Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.6e-11 Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2A_MOUSE (Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10 Identity = 50/143 (34.97%), Postives = 73/143 (51.05%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2B_HUMAN (Vesicle transport protein SFT2B OS=Homo sapiens GN=SFT2D2 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10 Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. Swiss-Prot
Match: SFT2B_MOUSE (Vesicle transport protein SFT2B OS=Mus musculus GN=Sft2d2 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: A0A0A0LC39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603050 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49 Identity = 115/162 (70.99%), Postives = 126/162 (77.78%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: B7FHE2_MEDTR (Got1/SFT2-like vescicle transporter family protein OS=Medicago truncatula GN=MTR_1g026920 PE=2 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.6e-39 Identity = 91/167 (54.49%), Postives = 114/167 (68.26%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: V7CXA0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G078100g PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.2e-38 Identity = 91/165 (55.15%), Postives = 118/165 (71.52%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: A0A059DEZ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01469 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.7e-38 Identity = 89/165 (53.94%), Postives = 119/165 (72.12%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. TrEMBL
Match: A0A0S3RN16_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G190300 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 6.4e-38 Identity = 91/165 (55.15%), Postives = 118/165 (71.52%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. TAIR10
Match: AT5G24170.1 (AT5G24170.1 Got1/Sft2-like vescicle transport protein family) HSP 1 Score: 148.3 bits (373), Expect = 4.1e-36 Identity = 83/156 (53.21%), Postives = 105/156 (67.31%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. TAIR10
Match: AT5G23550.1 (AT5G23550.1 Got1/Sft2-like vescicle transport protein family) HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26 Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|659082018|ref|XP_008441622.1| (PREDICTED: vesicle transport protein SFT2B [Cucumis melo]) HSP 1 Score: 219.5 bits (558), Expect = 4.1e-54 Identity = 121/167 (72.46%), Postives = 130/167 (77.84%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|449455944|ref|XP_004145710.1| (PREDICTED: vesicle transport protein SFT2B [Cucumis sativus]) HSP 1 Score: 204.1 bits (518), Expect = 1.8e-49 Identity = 115/162 (70.99%), Postives = 126/162 (77.78%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|1009122809|ref|XP_015878202.1| (PREDICTED: vesicle transport protein SFT2B [Ziziphus jujuba]) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40 Identity = 93/167 (55.69%), Postives = 119/167 (71.26%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|645258117|ref|XP_008234734.1| (PREDICTED: vesicle transport protein SFT2B [Prunus mume]) HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40 Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 1
BLAST of Cp4.1LG14g06820 vs. NCBI nr
Match: gi|694321715|ref|XP_009352013.1| (PREDICTED: vesicle transport protein SFT2B [Pyrus x bretschneideri]) HSP 1 Score: 172.2 bits (435), Expect = 7.5e-40 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |