Cp4.1LG14g06070 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g06070
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Iron-sulfur cluster assembly protein HesB
Location	Cp4.1LG14 : 617917 .. 620980 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTGTCTAGCCGGAGAGCGGCTCCNCCATTGAAATGTGTTTGTAATGGAAAAGAGAAAATAGAATACTAGACTCCCTTGCACCATCAAATTCTGATGCATAACATTCCCACTGAAAACTCCATACTTGAATACAAAATCAGAAAGGGGTTCTTAATAGTGATCCGTAACATCGCATCTACGAGCCGGAGAAATATTTTCAAGGGCGATAATCAGCATATAGTTTACCGAAATTCGGATCCGCGAGCTGAAAGTAAACAATCGAGCAACATATTCCAAATGGTGAACCATATGTTCTACCAAGGATGGAAATGAGGAGCAAAAAGCATGTGCTAAGAATCAAAATCAACTTCATACGAGATGCTTTGTTACTCGAATAGTAAAGATCAAACATCGAGCGCCAAAAACAATTACGGGACGCGGGAGAATTCCATCATGAAAAAAATTGGAAATGGAAGAACGCGCAGTTGAATTTCGGCGATCGAAAGCTAAAGCATGGCAGTAAATGGATCAGATCAGGCAATAAGAGGAATTAACCCATTACAAATTCGGATCGATAAAACAGATAGGAAGTCGGATTCATACTCTTGGAATGAAAGGATTACTGAAAGAACTGCCGCTAGTGTACGGCCTTCCCCTTCCAGTGCAGCAAATACGAGCTCTCACCGCCTGAAAATAACCGGAGCTCTGTTTTTCCGTCCAAGAATTATAGAACTACCCTTCTAGAGGACGCTCTGTCTCGATTTCTCCCGATTGCCGCAATTGCAAAGCAACGTTCTCTTCTCCCAATACCGATATTGCCCCCGCCAATTTGGCCATAGGGTATGTCGTTTGATTCCTTATTTCTAAATAAATAAATATAATTCGAAACTTATAACTTTTTACTTGAGCTAAAATTAATTACAATTTTAAACGATCAACAATATGTCACATTTTTTATAACATAAAGTAAAGAATATGATTATTTTAGTATTACTTACATAATATACCTTATGCTGCATATTAAATATATTATTAATACTAATCACACGTGGCATGATACCACAGGATAATTCAAAACGACTGCACCAGAAGCACATCACATAGAGCTAAAACCCCTTAATTTCGTTAGTTTAAAGACGATGAGTTGCAACCGAGAGAGTCACCATCAAGCGACCTCACGCGACCTCACGCGCCGCCCGGAAGGCCCGGGTGTTCCTCTACGGTGTCGGCCGTGAAGGCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTGTCTAGCCGGAGAGCGGCTCCTGTGTTAATCACGCCGATGTGATTTTCTACGTTCCGGCGCAGAGCATGGCGGACGATGAGGAATCGACGACGGCGGCGGTGAAATGGCGGCCTCTGCTTCCGATGGGATGTTCGTATGAAGGAGCTCTGTTTGTTTTGTTTGAAATGGTGGTATATCAACAGGGTGAGGCGTTGGGAGAAAGCCCCGAGACCGTCCGATCACGCAACACCAGTCTGGAATGAATGGATGGATCAGATTCAATTTTAATTTTATATAAAGATCTATTTAGTTATAAAGTGTTTTAAAGCTAAGTGAATGAAAANGCGCAGTTGAATTTCGGCGATCGAAAGCTAAAGCATGGCAGTAAATGGATCAGATCAGGCAATAAGAGGAATTAACCCATTACAAATTCGGATCGATAAAACAGATAGGAAGTCGGATTCATACTCTTGGAATGAAAGGATTACTGAAAGAACTGCCGCTAGTGTACGGCCTTCCCCTTCCAGTGCAGCAAATACGAGCTCTCACCGCCTGAAAATAACCGGAGCTCTGTTTTTCCGTCCAAGAATTATAGAACTACCCTTCTAGAGGACGCTCTGTCTCGATTTCTCCCGATTGCCGCAATTGCAAAGCAACGTTCTCTTCTCCCAATACCGATATTGCCCCCGCCAATTTGGCCATAGGGTATGTCGTTTGATTCCTTATTTCTAAATAAATAAATATAATTCGAAACTTATAACTTTTTACTTGAGCTAAAATTAATTACAATTTTAAACGATCAACAATATGTCACATTTTTTATAACATAAAGTAAAGAATATGATTATTTTAGTATTACTTACATAATATACCTTATGCTGCATATTAAATATATTATTAATACTAATCACACGTGGCATGATACCACAGGATAATTCAAAACGACTGCACCAGAAGCACATCACATAGAGCTAAAACCCCTTAATTTCGTTAGTTTAAAGACGATGAGTTGCAACCGAGAGAGTCACCATCAAGCGACCTCACGCGACCTCACGCGCCGCCCGGAAGGCCCGGGTGTTCCTCTACGGTGTCGGCCGTGAAGGCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTGTCTAGCCGGAGAGCGGCTCCTGTGTTAATCACGCCGATGTGATTTTCTACGTTCCGGCGCAGAGCATGGCGGACGATGAGGAATCGACGACGGCGGCGGTGAAATGGCGGCCTCTGCTTCCGATGGGATGTTCGTATGAAGGAGCTCTGTTTGTTTTGTTTGAAATGGTGGTATATCAACAGGGTGAGGCGTTGGGAGAAAGCCCCGAGACCGTCCGATCACGCAACACCAGTCTGGAA

mRNA sequence

GCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTGCCCGGGTGTTCCTCTACGGTGTCGGCCGTGAAGGCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTCCGGAGAGCGGCTCCTGTGTTAATCACGCCGATGTGATTTTCTACGTTCCGGCGCAGAGCATGGCGGACGATGAGGAATCGACGACGGCGGCGGTGAAATGGCGGCCTCTGCTTCCGATGGGATGTTCGTATGAAGGAGCTCTGTTTGTTTTGTTTGAAATGGTGGTATATCAACAGGGTGAGGCGTTGGGAGAAAGCCCCGAGACCGTCCGATCACGCAACACCAGCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTCCGGAGAGCGGCTCCTGTGTTAATCACGCCGATGTGATTTTCTACGTTCCGGCGCAGAGCATGGCGGACGATGAGGAATCGACGACGGCGGCGGTGAAATGGCGGCCTCTGCTTCCGATGGGATGTTCGTATGAAGGAGCTCTGTTTGTTTTGTTTGAAATGGTGGTATATCAACAGGGTGAGGCGTTGGGAGAAAGCCCCGAGACCGTCCGATCACGCAACACCAGTCTGGAA

Coding sequence (CDS)

ATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTGCCCGGGTGTTCCTCTACGGTGTCGGCCGTGAAGGCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTCCGGAGAGCGGCTCCTGTGTTAATCACGCCGATGTGATTTTCTACGTTCCGGCGCAGAGCATGGCGGACGATGAGGAATCGACGACGGCGGCGGTGAAATGGCGGCCTCTGCTTCCGATGGGATGTTCGTATGAAGGAGCTCTGTTTGTTTTGTTTGAAATGGTGGTATATCAACAGGGTGAGGCGTTGGGAGAAAGCCCCGAGACCGTCCGATCACGCAACACCAGCCTAATGCTCCAAGCCCTCTGTATACGGCTAGCTCATTTCGGCCTCTCGTCGCACCAGGTCTTCGACATGAACGCGCCGCCAATTTCAGCTCCTGACCTCCTGTATACGGATTTTCGACCGTCGATGCGATTTTCTCCGATGCCAGATCCAACGGCGATAGAGTTTTGCTTGACTCCGGAGAGCGGCTCCTGTGTTAATCACGCCGATGTGATTTTCTACGTTCCGGCGCAGAGCATGGCGGACGATGAGGAATCGACGACGGCGGCGGTGAAATGGCGGCCTCTGCTTCCGATGGGATGTTCGTATGAAGGAGCTCTGTTTGTTTTGTTTGAAATGGTGGTATATCAACAGGGTGAGGCGTTGGGAGAAAGCCCCGAGACCGTCCGATCACGCAACACCAGTCTGGAA

Protein sequence

MLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPSMRFSPMPDPTAIEFCLTARVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPSMRFSPMPDPTAIEFCLTPESGSCVNHADVIFYVPAQSMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSLMLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPSMRFSPMPDPTAIEFCLTPESGSCVNHADVIFYVPAQSMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSLE

Homology

[Close]

BLAST of Cp4.1LG14g06070 vs. TrEMBL
Match: A0A0A0LBC8_CUCSA (3-hexulose-6-phosphate isomerase OS=Cucumis sativus GN=Csa_3G181970 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.4e-44
Identity = 102/156 (65.38%), Postives = 115/156 (73.72%), Query Frame = 1


Query: 58  ARVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPSMRFSPMP 117
           ARVFLYGVGREGLML+ALC+RLAH GLSSHQVFDMNAPPI+  DLL     P   FS + 
Sbjct: 47  ARVFLYGVGREGLMLKALCMRLAHLGLSSHQVFDMNAPPIAGSDLLIASAGPG-GFSTVD 106

Query: 118 DPTAIE---------FCLTPESGSCVNHADVIFYVPAQSMADDEESTTAAVKWRPLLPMG 177
              ++              PE+GS V +ADVI YVPAQ+MADDEES  AA +WRPLLPMG
Sbjct: 107 AICSVARSKGGRVLVLTAQPENGSSVKYADVICYVPAQTMADDEESGEAA-EWRPLLPMG 166

Query: 178 CSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
             YEGALFVLFEMVVY+ GE LGESPE VRSR+T+L
Sbjct: 167 SLYEGALFVLFEMVVYRIGEVLGESPEAVRSRHTNL 200

[Close]

BLAST of Cp4.1LG14g06070 vs. TrEMBL
Match: A0A067JHP5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26134 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-39
Identity = 94/154 (61.04%), Postives = 110/154 (71.43%), Query Frame = 1


Query: 60  VFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPSMRFSPMPDP 119
           VFLYGVGREGLML+ALC+RLAH GLS+H VFDM  PPI++ DLL     P   FS +   
Sbjct: 48  VFLYGVGREGLMLKALCMRLAHLGLSTHLVFDMTTPPITSNDLLIASAGPG-GFSTVDAL 107

Query: 120 TAIE-------FCLT--PESGSCVNHADVIFYVPAQSMADDEESTTAAVKWRPLLPMGCS 179
            ++          LT  PE+GSCV HA V+ YVPAQ+MADD E     VK RPLLPMG  
Sbjct: 108 CSVARSNGARVLLLTAQPETGSCVKHASVVCYVPAQTMADDRE-----VKSRPLLPMGSV 167

Query: 180 YEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           YEGALFVLFEMV+Y+ GE LGESPET+RSR+T+L
Sbjct: 168 YEGALFVLFEMVIYRLGEVLGESPETIRSRHTNL 195

[Close]

BLAST of Cp4.1LG14g06070 vs. TrEMBL
Match: A0A0L9U0R0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g213400 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39
Identity = 97/180 (53.89%), Postives = 117/180 (65.00%), Query Frame = 1


Query: 38  RPSMRFSPMPDPTAIEFCLTA----RVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMN 97
           +P+  + P  D    E    A    RVFLYGVGREGLML+ALC+RL H GLS+H +FDM 
Sbjct: 15  KPTHPYPPPLDLLVTELASVASQNGRVFLYGVGREGLMLKALCMRLFHLGLSAHFIFDMT 74

Query: 98  APPISAPDLLYTDFRPSMRFSPMPDPTAIEFC---------LTPESGSCVNHADVIFYVP 157
            PPI+A DLL     P   FS +    A+  C           PE+GSCV HA+V+ YV 
Sbjct: 75  TPPIAAADLLIASAGPG-GFSTVDALCAVARCHGGRVLLLTAQPETGSCVKHANVVAYVA 134

Query: 158 AQSMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           AQ+MADD +    A K RPLLPMG  YEGALFVLFEMVVY+ GEALGE+P+ VRSR+T+L
Sbjct: 135 AQTMADDADVAEDA-KSRPLLPMGSVYEGALFVLFEMVVYKLGEALGETPDAVRSRHTNL 192

[Close]

BLAST of Cp4.1LG14g06070 vs. TrEMBL
Match: A0A0S3SN19_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G077100 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39
Identity = 97/180 (53.89%), Postives = 117/180 (65.00%), Query Frame = 1


Query: 38  RPSMRFSPMPDPTAIEFCLTA----RVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMN 97
           +P+  + P  D    E    A    RVFLYGVGREGLML+ALC+RL H GLS+H +FDM 
Sbjct: 28  KPTHPYPPPLDLLVTELASVASQNGRVFLYGVGREGLMLKALCMRLFHLGLSAHFIFDMT 87

Query: 98  APPISAPDLLYTDFRPSMRFSPMPDPTAIEFC---------LTPESGSCVNHADVIFYVP 157
            PPI+A DLL     P   FS +    A+  C           PE+GSCV HA+V+ YV 
Sbjct: 88  TPPIAAADLLIASAGPG-GFSTVDALCAVARCHGGRVLLLTAQPETGSCVKHANVVAYVA 147

Query: 158 AQSMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           AQ+MADD +    A K RPLLPMG  YEGALFVLFEMVVY+ GEALGE+P+ VRSR+T+L
Sbjct: 148 AQTMADDADVAEDA-KSRPLLPMGSVYEGALFVLFEMVVYKLGEALGETPDAVRSRHTNL 205

[Close]

BLAST of Cp4.1LG14g06070 vs. TrEMBL
Match: I1LDT1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G237500 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.3e-39
Identity = 98/180 (54.44%), Postives = 115/180 (63.89%), Query Frame = 1


Query: 38  RPSMRFSPMPDPTAIEFCLTA----RVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMN 97
           +P+  + P  D    E    A    RVFLYGVGREGLML+ALC+RL H GLS+H VFDM 
Sbjct: 26  KPTHPYPPPLDLLVTELASVASQNGRVFLYGVGREGLMLKALCMRLFHLGLSAHFVFDMT 85

Query: 98  APPISAPDLLYTDFRPSMRFSPMPDPTAIE-------FCLT--PESGSCVNHADVIFYVP 157
            PPI A DLL     P   FS +    A+          LT  PE+GSCV HA+ + YV 
Sbjct: 86  TPPIDAADLLIASAGPG-GFSTVDALCAVARSNGGRVLLLTAQPETGSCVKHANAVAYVA 145

Query: 158 AQSMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           AQ+MADD+       K RPLLPMG  YE ALFVLFEMVVY+ GEALGESPE+VRSR+T+L
Sbjct: 146 AQTMADDDADAERDAKSRPLLPMGSVYEAALFVLFEMVVYKLGEALGESPESVRSRHTNL 204

[Close]

BLAST of Cp4.1LG14g06070 vs. TAIR10
Match: AT5G52190.1 (AT5G52190.1 Sugar isomerase (SIS) family protein)

HSP 1 Score: 144.8 bits (364), Expect = 9.6e-35
Identity = 81/156 (51.92%), Postives = 97/156 (62.18%), Query Frame = 1


Query: 58  ARVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPS------- 117
           +R+FLYGVGREGLML+A  +RL HFGL +H VFDM  PPIS+ DLL     P        
Sbjct: 52  SRIFLYGVGREGLMLKAFAMRLFHFGLPTHLVFDMTTPPISSSDLLIASAGPGGFSTVDA 111

Query: 118 -MRFSPMPDPTAIEFCLTPESGSCVNHADVIFYVPAQSMADDE-ESTTAAVKWRPLLPMG 177
               +       I     P  GSCV HA  + YVPAQ+MA D     +  +  R LLPMG
Sbjct: 112 LCSVAKSNGAKVILITAEPAIGSCVKHATDVCYVPAQTMASDNGGGDSVEMGERRLLPMG 171

Query: 178 CSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
             YEGALFVLFEMVVY+ GE LGES E+VR+R+T+L
Sbjct: 172 SVYEGALFVLFEMVVYKLGEVLGESSESVRARHTNL 207

[Close]

BLAST of Cp4.1LG14g06070 vs. NCBI nr
Match: gi|449446041|ref|XP_004140780.1| (PREDICTED: uncharacterized protein LOC101217276 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43
Identity = 102/156 (65.38%), Postives = 115/156 (73.72%), Query Frame = 1


Query: 58  ARVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPSMRFSPMP 117
           ARVFLYGVGREGLML+ALC+RLAH GLSSHQVFDMNAPPI+  DLL     P   FS + 
Sbjct: 47  ARVFLYGVGREGLMLKALCMRLAHLGLSSHQVFDMNAPPIAGSDLLIASAGPG-GFSTVD 106

Query: 118 DPTAIE---------FCLTPESGSCVNHADVIFYVPAQSMADDEESTTAAVKWRPLLPMG 177
              ++              PE+GS V +ADVI YVPAQ+MADDEES  AA +WRPLLPMG
Sbjct: 107 AICSVARSKGGRVLVLTAQPENGSSVKYADVICYVPAQTMADDEESGEAA-EWRPLLPMG 166

Query: 178 CSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
             YEGALFVLFEMVVY+ GE LGESPE VRSR+T+L
Sbjct: 167 SLYEGALFVLFEMVVYRIGEVLGESPEAVRSRHTNL 200

[Close]

BLAST of Cp4.1LG14g06070 vs. NCBI nr
Match: gi|659077418|ref|XP_008439193.1| (PREDICTED: uncharacterized protein LOC103484066 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 5.8e-42
Identity = 104/180 (57.78%), Postives = 121/180 (67.22%), Query Frame = 1


Query: 38  RPSMRFSPMPDPTAIEFCLTA----RVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMN 97
           +P+  ++P  D    E    A    RVFLYGVGREGLML+ALC+RLAH GLSSHQVFDMN
Sbjct: 23  KPTQPYAPSLDILVSELSSVAARKARVFLYGVGREGLMLKALCMRLAHLGLSSHQVFDMN 82

Query: 98  APPISAPDLLYTDFRPSMRFSPMPDPTAIE---------FCLTPESGSCVNHADVIFYVP 157
           APPI+  DLL     P   FS +    ++              PE+GS V +ADVI YVP
Sbjct: 83  APPIAGSDLLIASAGPG-GFSTVDAICSVARSNGGRVLLLTAQPENGSSVKYADVICYVP 142

Query: 158 AQSMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           AQ+MADDEES  AA + RPLLPMG  YEGALFVLFEMVVY+ G  LGESPE VRSR+T+L
Sbjct: 143 AQTMADDEES-AAAAECRPLLPMGSLYEGALFVLFEMVVYRIGVVLGESPEAVRSRHTNL 200

[Close]

BLAST of Cp4.1LG14g06070 vs. NCBI nr
Match: gi|802769174|ref|XP_012090283.1| (PREDICTED: uncharacterized protein LOC105648490 [Jatropha curcas])

HSP 1 Score: 170.2 bits (430), Expect = 6.0e-39
Identity = 94/154 (61.04%), Postives = 110/154 (71.43%), Query Frame = 1


Query: 60  VFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMNAPPISAPDLLYTDFRPSMRFSPMPDP 119
           VFLYGVGREGLML+ALC+RLAH GLS+H VFDM  PPI++ DLL     P   FS +   
Sbjct: 48  VFLYGVGREGLMLKALCMRLAHLGLSTHLVFDMTTPPITSNDLLIASAGPG-GFSTVDAL 107

Query: 120 TAIE-------FCLT--PESGSCVNHADVIFYVPAQSMADDEESTTAAVKWRPLLPMGCS 179
            ++          LT  PE+GSCV HA V+ YVPAQ+MADD E     VK RPLLPMG  
Sbjct: 108 CSVARSNGARVLLLTAQPETGSCVKHASVVCYVPAQTMADDRE-----VKSRPLLPMGSV 167

Query: 180 YEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           YEGALFVLFEMV+Y+ GE LGESPET+RSR+T+L
Sbjct: 168 YEGALFVLFEMVIYRLGEVLGESPETIRSRHTNL 195

[Close]

BLAST of Cp4.1LG14g06070 vs. NCBI nr
Match: gi|657944993|ref|XP_008377479.1| (PREDICTED: uncharacterized protein LOC103440558 [Malus domestica])

HSP 1 Score: 169.9 bits (429), Expect = 7.9e-39
Identity = 93/178 (52.25%), Postives = 114/178 (64.04%), Query Frame = 1


Query: 39  PSMRFSPMPDPTAIEFCLTA----RVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMNA 98
           P+  + P+ D    E   TA    RVFLYGVGREGLM++ALC+RL+H GLS+H VFDM  
Sbjct: 20  PTHPYPPVLDLLVTELSSTAARNGRVFLYGVGREGLMVKALCMRLSHLGLSAHMVFDMTT 79

Query: 99  PPISAPDLLYTDFRPSMRFSP--------MPDPTAIEFCLTPESGSCVNHADVIFYVPAQ 158
           PPI+A DLL     P   F+               +     PE+GSCV HA V+ YVPAQ
Sbjct: 80  PPITAADLLIASAGPGGFFTVDALCSVARSNGGRVLLLTAQPETGSCVKHASVVGYVPAQ 139

Query: 159 SMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           +MA+D       +K RPLLPMG  YEGALFVLFEMVVY+ GE LG+SPE VR+R+T+L
Sbjct: 140 TMANDAGGDGDVMKSRPLLPMGSVYEGALFVLFEMVVYKLGEVLGQSPEAVRARHTNL 197

[Close]

BLAST of Cp4.1LG14g06070 vs. NCBI nr
Match: gi|965607703|dbj|BAT94194.1| (hypothetical protein VIGAN_08077100 [Vigna angularis var. angularis])

HSP 1 Score: 169.5 bits (428), Expect = 1.0e-38
Identity = 97/180 (53.89%), Postives = 117/180 (65.00%), Query Frame = 1


Query: 38  RPSMRFSPMPDPTAIEFCLTA----RVFLYGVGREGLMLQALCIRLAHFGLSSHQVFDMN 97
           +P+  + P  D    E    A    RVFLYGVGREGLML+ALC+RL H GLS+H +FDM 
Sbjct: 28  KPTHPYPPPLDLLVTELASVASQNGRVFLYGVGREGLMLKALCMRLFHLGLSAHFIFDMT 87

Query: 98  APPISAPDLLYTDFRPSMRFSPMPDPTAIEFC---------LTPESGSCVNHADVIFYVP 157
            PPI+A DLL     P   FS +    A+  C           PE+GSCV HA+V+ YV 
Sbjct: 88  TPPIAAADLLIASAGPG-GFSTVDALCAVARCHGGRVLLLTAQPETGSCVKHANVVAYVA 147

Query: 158 AQSMADDEESTTAAVKWRPLLPMGCSYEGALFVLFEMVVYQQGEALGESPETVRSRNTSL 205
           AQ+MADD +    A K RPLLPMG  YEGALFVLFEMVVY+ GEALGE+P+ VRSR+T+L
Sbjct: 148 AQTMADDADVAEDA-KSRPLLPMGSVYEGALFVLFEMVVYKLGEALGETPDAVRSRHTNL 205

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g06070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG14g06070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBC8_CUCSA	7.4e-44	65.38	3-hexulose-6-phosphate isomerase OS=Cucumis sativus GN=Csa_3G181970 PE=4 SV=1	[more]
A0A067JHP5_JATCU	4.2e-39	61.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26134 PE=4 SV=1	[more]
A0A0L9U0R0_PHAAN	7.2e-39	53.89	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g213400 PE=4 SV=1	[more]
A0A0S3SN19_PHAAN	7.2e-39	53.89	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G077100 PE=...	[more]
I1LDT1_SOYBN	9.3e-39	54.44	Uncharacterized protein OS=Glycine max GN=GLYMA_10G237500 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g06070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52190.1	9.6e-35	51.92	Sugar isomerase (SIS) family protein	[more]

BLAST of Cp4.1LG14g06070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446041\|ref\|XP_004140780.1\|	1.1e-43	65.38	PREDICTED: uncharacterized protein LOC101217276 [Cucumis sativus]	[more]
gi\|659077418\|ref\|XP_008439193.1\|	5.8e-42	57.78	PREDICTED: uncharacterized protein LOC103484066 [Cucumis melo]	[more]
gi\|802769174\|ref\|XP_012090283.1\|	6.0e-39	61.04	PREDICTED: uncharacterized protein LOC105648490 [Jatropha curcas]	[more]
gi\|657944993\|ref\|XP_008377479.1\|	7.9e-39	52.25	PREDICTED: uncharacterized protein LOC103440558 [Malus domestica]	[more]
gi\|965607703\|dbj\|BAT94194.1\|	1.0e-38	53.89	hypothetical protein VIGAN_08077100 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0016853	isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g06070.1	Cp4.1LG14g06070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.10490		coord: 58..103 score: 1.1E-4coord: 268..338 score: 4.2E-4coord: 134..203 score: 4.
None	No IPR available	PANTHER	PTHR10937	GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING	coord: 59..152 score: 2.2
None	No IPR available	PANTHER	PTHR10937:SF13	SUBFAMILY NOT NAMED	coord: 59..152 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g06070	Cucsa.107640	Cucumber (Gy14) v1	cgycpeB0241
Cp4.1LG14g06070	CmaCh18G012390	Cucurbita maxima (Rimu)	cmacpeB425
Cp4.1LG14g06070	CmoCh16G001380	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g06070	CmoCh18G012620	Cucurbita moschata (Rifu)	cmocpeB386
Cp4.1LG14g06070	Cla006192	Watermelon (97103) v1	cpewmB227
Cp4.1LG14g06070	Csa3G181970	Cucumber (Chinese Long) v2	cpecuB214
Cp4.1LG14g06070	MELO3C006895	Melon (DHL92) v3.5.1	cpemeB190
Cp4.1LG14g06070	CSPI03G16810	Wild cucumber (PI 183967)	cpecpiB217
Cp4.1LG14g06070	Lsi05G012420	Bottle gourd (USVL1VR-Ls)	cpelsiB172
Cp4.1LG14g06070	MELO3C006895.2	Melon (DHL92) v3.6.1	cpemedB233
Cp4.1LG14g06070	CsaV3_3G016980	Cucumber (Chinese Long) v3	cpecucB0257
Cp4.1LG14g06070	Bhi01G000975	Wax gourd	cpewgoB0290
Cp4.1LG14g06070	Carg22091	Silver-seed gourd	carcpeB1039
Cp4.1LG14g06070	Carg15139	Silver-seed gourd	carcpeB1376

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g06070	Cp4.1LG09g00840	Cucurbita pepo (Zucchini)	cpecpeB023

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g06070	Cucurbita pepo (Zucchini)	cpecpeB232
Cp4.1LG14g06070	Cucurbita pepo (Zucchini)	cpecpeB242
Cp4.1LG14g06070	Cucurbita pepo (Zucchini)	cpecpeB245
Cp4.1LG14g06070	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g06070	Cucurbita maxima (Rimu)	cmacpeB608
Cp4.1LG14g06070	Cucurbita moschata (Rifu)	cmocpeB557
Cp4.1LG14g06070	Wild cucumber (PI 183967)	cpecpiB229
Cp4.1LG14g06070	Cucumber (Chinese Long) v2	cpecuB226
Cp4.1LG14g06070	Watermelon (Charleston Gray)	cpewcgB202
Cp4.1LG14g06070	Watermelon (Charleston Gray)	cpewcgB207
Cp4.1LG14g06070	Melon (DHL92) v3.5.1	cpemeB181
Cp4.1LG14g06070	Cucumber (Gy14) v2	cgybcpeB327
Cp4.1LG14g06070	Melon (DHL92) v3.6.1	cpemedB225
Cp4.1LG14g06070	Silver-seed gourd	carcpeB0998
Cp4.1LG14g06070	Cucumber (Chinese Long) v3	cpecucB0252