Cp4.1LG14g05260 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG14g05260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative isoform 1
LocationCp4.1LG14 : 1100003 .. 1104621 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCCTCTGTGAAGAAGCAAGTAGAGCTTCACTTTCATTGTTATGTAAATCAAATCATTATCCGGTTATTTCTTCTCCTTGTAGTTCTTCGTCTTCGCACGGCCAGGTTACAGTGCATAAACCGTTTCCGTAACTTTTTGTGCGCTCTCTCTGCTGTTGCAGTCATTTGGTATCAATTGTGAAGGAATAACAAGAAAATGAAGCTTCGTCTTCATTTTTAAGAAAATCAAATCGTTATCCTGTGGAATTTTCTTCATCTAGCTGTTCTTCTTTCAAGTCCGAGGTTACGGCAGCGTACTTCAACCATTTCTGTAAGATCTCTCTCTCTCTCTCTCTCATTGCAATGTTTTCGGAATTATCTGTGAGGAATATCAATAAAGTAGAGCTTCATTTTCATTTCTAAATTAATCAAATCAATACGAAACTTCTGCTCATCCTTTACTCTAAATTCAGGATTCGGTTTCTGATATTCACTTGCAACATTTGATTTGCATTTTCTAGGACAATGTTCACTAAGTTCGGATTCTTATCAGATGAAGGCGCTACAAACTATCGAGTTTGCTGATTTGACTTAGTAGGTTTCTCTGCTCACTCACTTCATCTTTCCGAATCCTGCTCAATTGGACCTCTTCGAGTTTGCGAGCAACGTTCTGCTGCTGGTGTGGGAGAAAGATATCATGAGTATGTTTTTTTGTAACGAGAAACTCTATCTTTCTGAATTCTCTCTGTTCCGACTCTATCGAATATGCTGATTGGTATGAGTATGTTTCTTTCTCAAACACTCGTCTTAATCTTTCTGAATTATTTTCTTGATGAACAGAAACGTTATATTTCTTCATTCTTCTGATATTATCGAGTCTGCTCAATCGAATAAGTATATTTCTCTGCTCAATGACCTAATCTTTCCGAATAATTTTTTTTTACAAGTAACTATATCTTTCTATATCTTTTCTCCGTAACTCTTTTGTAAGAAACTTTGCCTTTTACAATTCTAAATAGAATTAGTTCAAACAGATTTTCTGTTTAGTTTCTAAATTATTTGATTCACGAATCATCATGTGCGACTTGCTCATGGTGCTTGGAGGAGACCGAGATCAAATTAGCATTACTCCGAAATTGTATGGCTAATGAGCTAAGAGAGGGATGTTATTCTGACAGACGGCTTTATTTCTGGATTTTTTCAGACAAATCTTGCTCAATCTATGCACATTTTTCATGCAGTCTCTTTTGTTATTATTATTATTTTGTTTGAATTCTATGCTTTTTAAGAAATAAATTACAGCGTACTTTGTTTTCCTCAGTCATCCAGTCAATACTTTCAGAAATTCATTTTCAGATGTAAACTGACTGCTATTCATCTTTATATATGACAGTTGAAGCGGCTCTTATAGATCAGTTATCTGACACTTATCATTAGACTGATTGACGGAAGAATTGGTATTTAATTTGCTTAGCTGCCGTACTTTTGTTGCGGGACTGAGATGTATGTGTTACAGTGATTTAGATATTTGTTACAATATTTCTAGAAGTACAAGAAGCTATTAGTCGCTTTAATCAGCTTCAATATGTCTATGCATATGTCAATGCAATATACATCATATTAATGAGTGCTATAAAACTAAAATTGTAGTGCTTGATGTTCCATTTGGATTGTAACTTCTGGCCATGTTCTGTCATTTACATCTTCATCTTTTTTGTTTGCAGCATAAATATGCAATCTATTTTCTTGCCAAAAACATTCATCGTATACTCATTTGGTGGAGTATATTCTGGCACTTTGTTGCATCGAAGTTCTAGTAAATGTGATGGAAGGTATATGTTTGGCGATGCCATATTAAAGTTGTTTAGGAAGAATGGCCTAAAAAAGGTCAGTAAAGCAGCATTATATGATAATTATACTATTAGCGCTAGGTGGCATGGATGTAAAGATCAAGAGGAACTATCTGGTGATTTGTGCAACTGTTTGATTCGTGACTATTGTAAGGTAGGGAATGTTGATGCTGCCATGTCTCTTCTTTCTCATATGGAGGCTGTAGGTCTCCATGCCTCTGTAGCATCTTACACATATTTGATTGAAGCTCATGGAAACGTAGGCAGGACTTTGGAAGCTGATATCTTATTTCAAGAAATGATTAGTTTTGGTCGTAAGCCAAGAACAACTGTCTGCAATGCACTACTAAGAGGATTCTTGAGAAAAGGCCTTTTAGATCTTGCATCTGATGTTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACGTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGCTGGAAGATACTTGGGGTATCATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGGTTATTGTAATATATCAGAACAATGGCATGTGGAAGAAAGCAGTGGGGATCGTTGATGAGATAAGAAAATCAGGGATTTCTGTGGACAAACACATTTACAACAGTATCATAGATACATTTGGGAAATATGGTCAATTACCCGAGGCCTTAGAAGTGTTCAAAAAAATGCAGCAGGATGGTGTAATGCCTGATATAACGACCTGGAATTCGCTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCCCTGGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATTTTCATTACTCTAATTAGCTCGTTGGGTGAGCAGGGGAAGTGGGATGTTATAAAGAAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATTTTAGTTGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAATGTATATCTGCTCTCAAGTCTGCAGGTCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTGCTCGACAGGTTTGATGCCCATCTTTACTAATTTTTCTTTTTGTATTATGTAAGTTCTCTAGCTGCAAAAGTTAACTGAATTTTTATGGCCTTGGTTTGTTGTTAGTTCGTTATTCTCTCTGCACAGAGATACTGGATGTTTTCTATGAACAAAGAAATATTGTTGGTCGTGATTACTAAATTATTGTGAGACAATTTTCTTGTATTTTGGTAATTCAATGCAGGGTTTGTGTGAAGAGACAGTAAAAGTGCTAGAGCTAATGGAAGCAGAAGGAATCGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCGTTTGCTGTTGCTGGCAGGCATTTGGAGGCGTTGGCCATTTATCATCATATAGTTGAAGTTGTAAGTCTTCATGTTCGGTAATGCAAAGCCAGACCAGAAACATGGTTAAAGTCGCATGCAATCAAATTTCTTCCTTTTTTGTATTATCAAGATAATCCTATTATTCATCCTTATTACTTTGTCATATTTTTCTGAGAAGGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCGTATATTCGTGCAAAGAAGTTTCATAAGGTGCTTACTTATCCTCTTGCCACATTAATTTTTGTTCCGACGAGTTTTCTAAATTTTTTAGATGAAGTTCTTCATTTATTGTCTATGTTTTGACTGCATGAGATCGTTTAAGTATGAAAAGTTCAAATTTTTTATCTTCTATGAGAAGCCCTTTTGATACCTTCTAAGTCCTAACCATATCTGGCTAGGTCCCTGAAATATACAAAGAAATGGAAAGTGCTGGTTGCACGCCAGATAGGAAGGCCAGAGAGATGTTGAAGTCCGTAACAGTGGTTCTTGAACAGAGGCATTGTAAGTTCACCCTTTTTGTGCTTGTATTTCATAGTTCCTAATCCAGAGCATTCCTTGCATGATTGTGGTTTAATTCTTCACCACTTTGCCTCTAGGCGAGGGTAAATTTAGCAAGTCCAGTCATAATTTGAAAATTTATATTCGGGGAGTGTCGCATATTATGCGTCTGACAGAAGGATTCCTCTTGAAAAATATTGCATTATATCTTAATTGGTATGGGGAGGGATGAATTAAGTTTCATGCATCTGAGAAAACGACCAAAAGTGGAAGTAAATCATGTACATGTATTGATGCCTTTGTTTTGCATGTGATAGAAACTATATTCTACTACACAGATCATTCAGTAAGAACCAATTGAAACCCTAGGAGTTATATTGCATCTCCTCTACCAGCCTTTTGATCAATTACTCGCTGATTAAAAAGAAACTATTTTCTTATATCTAAGGCCACATTTCATTGTTTTTTTCCTAGAAAAAGAATATATGAAAAGACAGCAATTGAATGTTTGGATCTTGTTCATTGAAAAACAGTCATAAAAAATTGATTTTATGTTTCTTTAGCAGCCATCTAAAATCTTGATCGAGGAATTGATCTACACCAAGAAAGTAGATCATAATGCCAGGTAAAAACTGACCCTATTGCCTTAGAGTTGCTGTGAACATCTGGACATTCTCGTCAAGGAGGATCTATTATATGTCTAACAGTTTATAACGACATCAATGACAGGCCAACCTTCAAATGGACCCTGGGGAACTAGGGGCAGAAACAGTTTCTGGCAATAACCTTGGAGATGCAACGACGTCTATCTTGTAA

mRNA sequence

ATGGAATCCTCTGTGAAGAAGCAAGTAGAGCTTCACTTTCATTGTTATGTAAATCAAATCATTATCCGGTTATTTCTTCTCCTTGTAGTTCTTCGTCTTCGCACGGCCAGGTTACAGTGCATAAACCGTTTCCGTAACTTTTTGTGCGCTCTCTCTGCTGTTGCAGTCATTTGCTGTTCTTCTTTCAAGTCCGAGGTTACGGCAGCGTACTTCAACCATTTCTGTTTCTCTGCTCACTCACTTCATCTTTCCGAATCCTGCTCAATTGGACCTCTTCGAGTTTGCGAGCAACGTTCTGCTGCTGGTGTGGGAGAAAGATATCATGACATAAATATGCAATCTATTTTCTTGCCAAAAACATTCATCGTATACTCATTTGGTGGAGTATATTCTGGCACTTTGTTGCATCGAAGTTCTAGTAAATGTGATGGAAGGTATATGTTTGGCGATGCCATATTAAAGTTGTTTAGGAAGAATGGCCTAAAAAAGGTCAGTAAAGCAGCATTATATGATAATTATACTATTAGCGCTAGGTGGCATGGATGTAAAGATCAAGAGGAACTATCTGGTGATTTGTGCAACTGTTTGATTCGTGACTATTGTAAGGTAGGGAATGTTGATGCTGCCATGTCTCTTCTTTCTCATATGGAGGCTGTAGGTCTCCATGCCTCTGTAGCATCTTACACATATTTGATTGAAGCTCATGGAAACGTAGGCAGGACTTTGGAAGCTGATATCTTATTTCAAGAAATGATTAGTTTTGGTCGTAAGCCAAGAACAACTGTCTGCAATGCACTACTAAGAGGATTCTTGAGAAAAGGCCTTTTAGATCTTGCATCTGATGTTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACGTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGCTGGAAGATACTTGGGGTATCATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGGTTATTGTAATATATCAGAACAATGGCATGTGGAAGAAAGCAGTGGGGATCGTTGATGAGATAAGAAAATCAGGGATTTCTGTGGACAAACACATTTACAACAGTATCATAGATACATTTGGGAAATATGGTCAATTACCCGAGGCCTTAGAAGTGTTCAAAAAAATGCAGCAGGATGGTGTAATGCCTGATATAACGACCTGGAATTCGCTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCCCTGGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATTTTCATTACTCTAATTAGCTCGTTGGGTGAGCAGGGGAAGTGGGATGTTATAAAGAAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATTTTAGTTGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAATGTATATCTGCTCTCAAGTCTGCAGGTCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTGCTCGACAGGGTTTGTGTGAAGAGACAGTAAAAGTGCTAGAGCTAATGGAAGCAGAAGGAATCGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCGTTTGCTGTTGCTGGCAGGCATTTGGAGGCGTTGGCCATTTATCATCATATAGTTGAAGTTGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCGTATATTCGTGCAAAGAAGTTTCATAAGGTCCCTGAAATATACAAAGAAATGGAAAGTGCTGGTTGCACGCCAGATAGGAAGGCCAGAGAGATGTTGAAGTCCGTAACAGTGGTTCTTGAACAGAGGCATTAAACTATATTCTACTACACAGATCATTCAGCCAACCTTCAAATGGACCCTGGGGAACTAGGGGCAGAAACAGTTTCTGGCAATAACCTTGGAGATGCAACGACGTCTATCTTGTAA

Coding sequence (CDS)

ATGGAATCCTCTGTGAAGAAGCAAGTAGAGCTTCACTTTCATTGTTATGTAAATCAAATCATTATCCGGTTATTTCTTCTCCTTGTAGTTCTTCGTCTTCGCACGGCCAGGTTACAGTGCATAAACCGTTTCCGTAACTTTTTGTGCGCTCTCTCTGCTGTTGCAGTCATTTGCTGTTCTTCTTTCAAGTCCGAGGTTACGGCAGCGTACTTCAACCATTTCTGTTTCTCTGCTCACTCACTTCATCTTTCCGAATCCTGCTCAATTGGACCTCTTCGAGTTTGCGAGCAACGTTCTGCTGCTGGTGTGGGAGAAAGATATCATGACATAAATATGCAATCTATTTTCTTGCCAAAAACATTCATCGTATACTCATTTGGTGGAGTATATTCTGGCACTTTGTTGCATCGAAGTTCTAGTAAATGTGATGGAAGGTATATGTTTGGCGATGCCATATTAAAGTTGTTTAGGAAGAATGGCCTAAAAAAGGTCAGTAAAGCAGCATTATATGATAATTATACTATTAGCGCTAGGTGGCATGGATGTAAAGATCAAGAGGAACTATCTGGTGATTTGTGCAACTGTTTGATTCGTGACTATTGTAAGGTAGGGAATGTTGATGCTGCCATGTCTCTTCTTTCTCATATGGAGGCTGTAGGTCTCCATGCCTCTGTAGCATCTTACACATATTTGATTGAAGCTCATGGAAACGTAGGCAGGACTTTGGAAGCTGATATCTTATTTCAAGAAATGATTAGTTTTGGTCGTAAGCCAAGAACAACTGTCTGCAATGCACTACTAAGAGGATTCTTGAGAAAAGGCCTTTTAGATCTTGCATCTGATGTTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACGTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGCTGGAAGATACTTGGGGTATCATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGGTTATTGTAATATATCAGAACAATGGCATGTGGAAGAAAGCAGTGGGGATCGTTGATGAGATAAGAAAATCAGGGATTTCTGTGGACAAACACATTTACAACAGTATCATAGATACATTTGGGAAATATGGTCAATTACCCGAGGCCTTAGAAGTGTTCAAAAAAATGCAGCAGGATGGTGTAATGCCTGATATAACGACCTGGAATTCGCTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCCCTGGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATTTTCATTACTCTAATTAGCTCGTTGGGTGAGCAGGGGAAGTGGGATGTTATAAAGAAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATTTTAGTTGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAATGTATATCTGCTCTCAAGTCTGCAGGTCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTGCTCGACAGGGTTTGTGTGAAGAGACAGTAAAAGTGCTAGAGCTAATGGAAGCAGAAGGAATCGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCGTTTGCTGTTGCTGGCAGGCATTTGGAGGCGTTGGCCATTTATCATCATATAGTTGAAGTTGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCGTATATTCGTGCAAAGAAGTTTCATAAGGTCCCTGAAATATACAAAGAAATGGAAAGTGCTGGTTGCACGCCAGATAGGAAGGCCAGAGAGATGTTGAAGTCCGTAACAGTGGTTCTTGAACAGAGGCATTAA

Protein sequence

MESSVKKQVELHFHCYVNQIIIRLFLLLVVLRLRTARLQCINRFRNFLCALSAVAVICCSSFKSEVTAAYFNHFCFSAHSLHLSESCSIGPLRVCEQRSAAGVGERYHDINMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQRH
BLAST of Cp4.1LG14g05260 vs. Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.2e-95
Identity = 183/474 (38.61%), Postives = 281/474 (59.28%), Query Frame = 1

Query: 152 ILKLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMS 211
           I  L R N +  V    LY            +D+ EL   L N +I  + K G+   A+ 
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIE--------RDKLELDVQLVNDIIMGFAKSGDPSKALQ 298

Query: 212 LLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFL 271
           LL   +A GL A  A+   +I A  + GRTLEA+ LF+E+   G KPRT   NALL+G++
Sbjct: 299 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV 358

Query: 272 RKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSF 331
           + G L  A  ++  M    +  ++ TY +L+D + NAGR E    ++ EM+    + NSF
Sbjct: 359 KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 418

Query: 332 VYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKM 391
           V+S+++  +++ G W+K   ++ E++  G+  D+  YN +IDTFGK+  L  A+  F +M
Sbjct: 419 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 478

Query: 392 QQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKW 451
             +G+ PD  TWN+LI  +CK G    A E+F  M+ +G  P    +  +I+S G+Q +W
Sbjct: 479 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 538

Query: 452 DVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCII 511
           D +K+ L  MK +G   + + +  LVD+YG+ G+F DA +C+  +KS GL PS++ +  +
Sbjct: 539 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 598

Query: 512 ANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGI 571
            NA+A++GL E+ V    +M ++G++P+L+ LN LINAF    R  EA A+  ++ E G+
Sbjct: 599 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 658

Query: 572 SPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQ 626
            PDV+TYTTLMKA IR  KF KVP +Y+EM  +GC PDRKAR ML+S    ++Q
Sbjct: 659 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQ 704

BLAST of Cp4.1LG14g05260 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 9.1e-49
Identity = 118/427 (27.63%), Postives = 209/427 (48.95%), Query Frame = 1

Query: 191 DLC-------NCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLE 250
           DLC       + +++ Y ++  +D A+S++   +A G    V SY  +++A     R + 
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 251 -ADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILL 310
            A+ +F+EM+     P     N L+RGF   G +D+A  +   M       N  TY  L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 311 DYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGIS 370
           D +    +++D + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 371 VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALEL 430
           +D+  YN++I  + K G   +AL +  +M + G+ P + T+ SLI   CK+GN+  A+E 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 431 FTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQ 490
              M+ +G+ P+ + + TL+    ++G  +   + L  M   G   S + Y  L++ +  
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427

Query: 491 YGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVM 550
            G+ +DA   +  +K  GL P   ++  + + F R    +E ++V   M  +GI+P+ + 
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487

Query: 551 LNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEME 610
            + LI  F    R  EA  +Y  ++ VG+ PD  TYT L+ AY       K  +++ EM 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547

BLAST of Cp4.1LG14g05260 vs. Swiss-Prot
Match: PP402_ARATH (Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis thaliana GN=At5g36300 PE=3 SV=3)

HSP 1 Score: 174.1 bits (440), Expect = 4.8e-42
Identity = 115/339 (33.92%), Postives = 189/339 (55.75%), Query Frame = 1

Query: 264 NALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTWGIINEMKR 323
           N+ +R F R G  + A  +L  +  L  + +  +Y   ++  A+  R  +   + +E+ R
Sbjct: 15  NSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVVR 74

Query: 324 KGF--ELNSFVYSKVIVIYQNNGM-WKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQ 383
                  +  +Y+ ++  Y    + W+    +V+E++K    ++  +Y  II  +   G 
Sbjct: 75  FMIYGSYSVRLYNALVSRYLRKEVSWR----VVNEMKKRKFRLNSFVYGKIIRIYRDNGM 134

Query: 384 LPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDPKIFIT 443
             +AL + +++++ G+  D+  +NS+I    K G L   L++   +Q      D +  I 
Sbjct: 135 WKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSS---DSRPNIR 194

Query: 444 LISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAG 503
             +SL                 +R H + G V ++ ++++     F+D  + +  LKS G
Sbjct: 195 TWNSL-----------------IRWHCHHGAV-DMALELFTMI--FEDIGELVGKLKSQG 254

Query: 504 LLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGRHLEAL 563
           + PSA+ FC +ANA+A+QGLC++TVKVL++ME EGIEPNL+MLNVLINAF  AG+H+EAL
Sbjct: 255 VAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEAL 314

Query: 564 AIYHHIVE-VGISPDVITYTTLMKAYIRAKKFHKVPEIY 599
           +IYHHI E V I PDV+TY+TLMKA+ RAKK+  V   Y
Sbjct: 315 SIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMVCSFY 326

BLAST of Cp4.1LG14g05260 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.8e-42
Identity = 103/410 (25.12%), Postives = 200/410 (48.78%), Query Frame = 1

Query: 196 LIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFG 255
           +I  + K G+ D A S    M   G+   V +Y  +I A        +A  +   M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 256 RKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 315
             P     N++L G+   G    A   L  M    ++ +  TY +L+DY    GR  +  
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 316 GIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 375
            I + M ++G +     Y  ++  Y   G   +  G++D + ++GI  D ++++ +I  +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 376 GKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDP 435
            K G++ +A+ VF KM+Q G+ P+  T+ ++I   CKSG +  A+  F  M ++G+ P  
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441

Query: 436 KIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 495
            ++ +LI  L    KW+  ++ +  M  RG   + + +  ++D + + G+  ++EK    
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 496 LKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGR 555
           +   G+ P+   +  + N +   G  +E +K+L  M + G++PN V  + LIN +    R
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561

Query: 556 HLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAG 606
             +AL ++  +   G+SPD+ITY  +++   + ++     E+Y  +  +G
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

BLAST of Cp4.1LG14g05260 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 8.2e-42
Identity = 106/416 (25.48%), Postives = 205/416 (49.28%), Query Frame = 1

Query: 196 LIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFG 255
           ++  YC+ G +D    L+  M+  GL  +   Y  +I     + +  EA+  F EMI  G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 256 RKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 315
             P T V   L+ GF ++G +  AS     M   DI  +  TY  ++      G + +  
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 316 GIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 375
            + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++ID  
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 376 GKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDP 435
            K G L  A E+  +M + G+ P+I T+NS++   CKSGN+  A++L  + +  G++ D 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 436 KIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 495
             + TL+ +  + G+ D  ++ L  M  +G + + + + +L++ +  +G  +D EK ++ 
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 496 LKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGR 555
           + + G+ P+A+ F  +   +  +   +    + + M + G+ P+      L+     A  
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 556 HLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAGCTPDRK 612
             EA  ++  +   G S  V TY+ L+K +++ KKF +  E++ +M   G   D++
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702

BLAST of Cp4.1LG14g05260 vs. TrEMBL
Match: A0A0A0KZ91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025700 PE=4 SV=1)

HSP 1 Score: 907.1 bits (2343), Expect = 1.2e-260
Identity = 451/518 (87.07%), Postives = 476/518 (91.89%), Query Frame = 1

Query: 110 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 169
           + M SIFLPK FIV SFGGV+S  LL R SSKCDG+YMF   I+KLFR N L   SKA +
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 170 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 229
            DN  IS+RWHGC D+EELS + CN LIRDYCKVG+VD+AMSLL+HME+VGLHA++ SYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 230 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 289
           YLIEA GNVGRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLAS V VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 290 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 349
           DI+KNQETYEILLDYH NAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 350 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 409
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYG L EALEVFK+MQQDGV+PDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 410 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 469
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLIS LGEQGKWDVI +NLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 470 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 529
            LVYEILVDIYGQYGQFQDAEKCISALKSAGLL S SNFCIIANAFA+QGLCEETVKVL+
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 530 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 589
           LMEAEGIEPNLVMLNVLINAFAVAGRH EALAIYHHI+EVGISPDVITYTTLMKA+IRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 590 KFHKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQRH 628
           KF KVPEIYKEMESAGCTPDRKAREMLKSVT +LEQRH
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 518

BLAST of Cp4.1LG14g05260 vs. TrEMBL
Match: A0A061EZY0_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_025371 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 7.2e-186
Identity = 314/447 (70.25%), Postives = 384/447 (85.91%), Query Frame = 1

Query: 181 GCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGR 240
           G    EEL+ +L N  I+ YCK+G+VD AM L++HMEA+G H +  SY +LIE+ G+VGR
Sbjct: 67  GSNSGEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGR 126

Query: 241 TLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEI 300
           TLEAD LFQEMI  G KPR  + N LL+GFLRKGLL LA  VLV+M +  + KNQETYEI
Sbjct: 127 TLEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEI 186

Query: 301 LLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSG 360
           LLDY+ NAGRLEDTW ++NEMK KG  LNSFVYSK+I +Y++NGMW+KA+GIV+EIR+ G
Sbjct: 187 LLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKG 246

Query: 361 ISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATAL 420
           IS+D+ IYNSIIDTFGKYG+L EALEVF+KM+Q+ + PDITTWNSLIQW+CK+G+L  AL
Sbjct: 247 ISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKAL 306

Query: 421 ELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIY 480
           ELFT+MQEQG++PDPKIF++LIS LGE GKWD+IKKN ++MK RGH++ G +Y ILVDIY
Sbjct: 307 ELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIY 366

Query: 481 GQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNL 540
           GQYG+FQDAE CISALKS GLLPSAS FC++ANA+A+QG CE+TVKVL++MEAEGIEPN+
Sbjct: 367 GQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNI 426

Query: 541 VMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKE 600
           VMLNVLINAF +AGRH EAL+IYHHI + GISPDVITY+TLMKA+IRAKKF +VPEIY+E
Sbjct: 427 VMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYRE 486

Query: 601 MESAGCTPDRKAREMLKSVTVVLEQRH 628
           MES+GCTPDRKAR+ML++  +VLEQRH
Sbjct: 487 MESSGCTPDRKARQMLQTALMVLEQRH 513

BLAST of Cp4.1LG14g05260 vs. TrEMBL
Match: B9S1X9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1323900 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 4.2e-178
Identity = 301/442 (68.10%), Postives = 376/442 (85.07%), Query Frame = 1

Query: 186 EELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEAD 245
           +ELSG+  N  I D CKVG+VD AM+LL+ M+++G H S  SYT LIE   +VGRTLEA+
Sbjct: 17  QELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAE 76

Query: 246 ILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYH 305
            L+QEM+ FG KPR  + N +LRGFL+KGLL +A  VL ++ DL + +NQETYEILLDY+
Sbjct: 77  ALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYN 136

Query: 306 ANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDK 365
            NAGRLEDTW +INEMK+KGF+LNSFVYSKVI +Y++NGMWKKA+GI++EIR+ G+ +DK
Sbjct: 137 VNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDK 196

Query: 366 HIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTD 425
           HIYNSIIDTFGKYG+L EALEV   MQQ G+ PDI TWNSLI+W+CK+GNL+ ALELF+ 
Sbjct: 197 HIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSK 256

Query: 426 MQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQ 485
           MQ QG++PDPKI +T+IS L EQGKW++I++N D MK  G+K SG +Y ILVDIYGQYG+
Sbjct: 257 MQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGR 316

Query: 486 FQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNV 545
           FQDAE+CISALKS G+LPSAS FC++ANA+A+QGLCE+TVKVL+LMEAEGIEPNL+MLNV
Sbjct: 317 FQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNV 376

Query: 546 LINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAG 605
           LINAF +AGRH EAL+IYHH+ E GISPDV+TY+TLMKAYIRA+KF +VPEIY EMES+G
Sbjct: 377 LINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSG 436

Query: 606 CTPDRKAREMLKSVTVVLEQRH 628
           CTPD+KARE+L++  +VL +R+
Sbjct: 437 CTPDKKAREILQAALMVLGRRN 458

BLAST of Cp4.1LG14g05260 vs. TrEMBL
Match: A0A067DVT4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009556mg PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 2.1e-177
Identity = 305/446 (68.39%), Postives = 374/446 (83.86%), Query Frame = 1

Query: 181 GCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGR 240
           G    EE SG+  N  I+  CK+G++D AM+LL+ M+A+G H S  SY  LIEA  +VGR
Sbjct: 68  GSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGR 127

Query: 241 TLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEI 300
           TLEAD +FQEM+ FG  P+    N LLRGFL+KGLL L S +L++M D+ I +NQETYEI
Sbjct: 128 TLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEI 187

Query: 301 LLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSG 360
           LLDYH NAGRL+DTW IINEM+ KGF+LNSFVY KVI +Y++NGMWKKAVGIV+EIR+ G
Sbjct: 188 LLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMG 247

Query: 361 ISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATAL 420
           +S+D+ IYNSIIDTFGKYG+L EALEVF+KMQQ+ + PDI TWNSLI+W+CK+G++A AL
Sbjct: 248 LSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKAL 307

Query: 421 ELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIY 480
           ELFT MQEQG +PDPKIFIT+IS LGE GKWDVIKKN ++MK RGH   G +Y ILVDIY
Sbjct: 308 ELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIY 367

Query: 481 GQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNL 540
           GQYG+F+D E+CI+ALK  GL PS S FCI+ANA+A+QGLCE+TVKVL+LME EGIEPNL
Sbjct: 368 GQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNL 427

Query: 541 VMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKE 600
           VMLNVLINAF VAG++ EAL++YH + ++GISPD++TY+TLMKA+IRAKKFHKVPEIYK+
Sbjct: 428 VMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQ 487

Query: 601 MESAGCTPDRKAREMLKSVTVVLEQR 627
           MES+GCTPDRKAR++L+S  VVLEQR
Sbjct: 488 MESSGCTPDRKARQILQSALVVLEQR 513

BLAST of Cp4.1LG14g05260 vs. TrEMBL
Match: A0A067DMB4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009556mg PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 2.1e-177
Identity = 305/446 (68.39%), Postives = 374/446 (83.86%), Query Frame = 1

Query: 181 GCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGR 240
           G    EE SG+  N  I+  CK+G++D AM+LL+ M+A+G H S  SY  LIEA  +VGR
Sbjct: 68  GSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGR 127

Query: 241 TLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEI 300
           TLEAD +FQEM+ FG  P+    N LLRGFL+KGLL L S +L++M D+ I +NQETYEI
Sbjct: 128 TLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEI 187

Query: 301 LLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSG 360
           LLDYH NAGRL+DTW IINEM+ KGF+LNSFVY KVI +Y++NGMWKKAVGIV+EIR+ G
Sbjct: 188 LLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMG 247

Query: 361 ISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATAL 420
           +S+D+ IYNSIIDTFGKYG+L EALEVF+KMQQ+ + PDI TWNSLI+W+CK+G++A AL
Sbjct: 248 LSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKAL 307

Query: 421 ELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIY 480
           ELFT MQEQG +PDPKIFIT+IS LGE GKWDVIKKN ++MK RGH   G +Y ILVDIY
Sbjct: 308 ELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIY 367

Query: 481 GQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNL 540
           GQYG+F+D E+CI+ALK  GL PS S FCI+ANA+A+QGLCE+TVKVL+LME EGIEPNL
Sbjct: 368 GQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNL 427

Query: 541 VMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKE 600
           VMLNVLINAF VAG++ EAL++YH + ++GISPD++TY+TLMKA+IRAKKFHKVPEIYK+
Sbjct: 428 VMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQ 487

Query: 601 MESAGCTPDRKAREMLKSVTVVLEQR 627
           MES+GCTPDRKAR++L+S  VVLEQR
Sbjct: 488 MESSGCTPDRKARQILQSALVVLEQR 513

BLAST of Cp4.1LG14g05260 vs. TAIR10
Match: AT5G42310.1 (AT5G42310.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-96
Identity = 183/474 (38.61%), Postives = 281/474 (59.28%), Query Frame = 1

Query: 152 ILKLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMS 211
           I  L R N +  V    LY            +D+ EL   L N +I  + K G+   A+ 
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIE--------RDKLELDVQLVNDIIMGFAKSGDPSKALQ 298

Query: 212 LLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFL 271
           LL   +A GL A  A+   +I A  + GRTLEA+ LF+E+   G KPRT   NALL+G++
Sbjct: 299 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV 358

Query: 272 RKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSF 331
           + G L  A  ++  M    +  ++ TY +L+D + NAGR E    ++ EM+    + NSF
Sbjct: 359 KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 418

Query: 332 VYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKM 391
           V+S+++  +++ G W+K   ++ E++  G+  D+  YN +IDTFGK+  L  A+  F +M
Sbjct: 419 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 478

Query: 392 QQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKW 451
             +G+ PD  TWN+LI  +CK G    A E+F  M+ +G  P    +  +I+S G+Q +W
Sbjct: 479 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 538

Query: 452 DVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCII 511
           D +K+ L  MK +G   + + +  LVD+YG+ G+F DA +C+  +KS GL PS++ +  +
Sbjct: 539 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 598

Query: 512 ANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGI 571
            NA+A++GL E+ V    +M ++G++P+L+ LN LINAF    R  EA A+  ++ E G+
Sbjct: 599 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 658

Query: 572 SPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQ 626
            PDV+TYTTLMKA IR  KF KVP +Y+EM  +GC PDRKAR ML+S    ++Q
Sbjct: 659 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQ 704

BLAST of Cp4.1LG14g05260 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 196.4 bits (498), Expect = 5.1e-50
Identity = 118/427 (27.63%), Postives = 209/427 (48.95%), Query Frame = 1

Query: 191 DLC-------NCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLE 250
           DLC       + +++ Y ++  +D A+S++   +A G    V SY  +++A     R + 
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 251 -ADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILL 310
            A+ +F+EM+     P     N L+RGF   G +D+A  +   M       N  TY  L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 311 DYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGIS 370
           D +    +++D + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 371 VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALEL 430
           +D+  YN++I  + K G   +AL +  +M + G+ P + T+ SLI   CK+GN+  A+E 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 431 FTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQ 490
              M+ +G+ P+ + + TL+    ++G  +   + L  M   G   S + Y  L++ +  
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427

Query: 491 YGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVM 550
            G+ +DA   +  +K  GL P   ++  + + F R    +E ++V   M  +GI+P+ + 
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487

Query: 551 LNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEME 610
            + LI  F    R  EA  +Y  ++ VG+ PD  TYT L+ AY       K  +++ EM 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547

BLAST of Cp4.1LG14g05260 vs. TAIR10
Match: AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 4.6e-43
Identity = 106/416 (25.48%), Postives = 205/416 (49.28%), Query Frame = 1

Query: 196 LIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFG 255
           ++  YC+ G +D    L+  M+  GL  +   Y  +I     + +  EA+  F EMI  G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 256 RKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 315
             P T V   L+ GF ++G +  AS     M   DI  +  TY  ++      G + +  
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 316 GIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 375
            + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++ID  
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 376 GKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDP 435
            K G L  A E+  +M + G+ P+I T+NS++   CKSGN+  A++L  + +  G++ D 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 436 KIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 495
             + TL+ +  + G+ D  ++ L  M  +G + + + + +L++ +  +G  +D EK ++ 
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 496 LKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGR 555
           + + G+ P+A+ F  +   +  +   +    + + M + G+ P+      L+     A  
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 556 HLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAGCTPDRK 612
             EA  ++  +   G S  V TY+ L+K +++ KKF +  E++ +M   G   D++
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702

BLAST of Cp4.1LG14g05260 vs. TAIR10
Match: AT5G55840.1 (AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-42
Identity = 110/416 (26.44%), Postives = 186/416 (44.71%), Query Frame = 1

Query: 194 NCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMIS 253
           N ++  YCK G   AA+ LL HM++ G+ A V +Y  LI       R  +  +L ++M  
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 254 FGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLED 313
               P     N L+ GF  +G + +AS +L  M    +  N  T+  L+D H + G  ++
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 314 TWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIID 373
              +   M+ KG   +   Y  ++     N  +  A G    ++++G+ V +  Y  +ID
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 374 TFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHP 433
              K G L EA+ +  +M +DG+ PDI T+++LI   CK G   TA E+   +   G+ P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511

Query: 434 DPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCI 493
           +  I+ TLI +    G      +  ++M L GH      + +LV    + G+  +AE+ +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 494 SALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVA 553
             + S G+LP+  +F  + N +   G   +   V + M   G  P       L+      
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 554 GRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAGCTPD 610
           G   EA      +  V  + D + Y TL+ A  ++    K   ++ EM      PD
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687

BLAST of Cp4.1LG14g05260 vs. TAIR10
Match: AT3G22470.1 (AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 3.0e-42
Identity = 105/414 (25.36%), Postives = 197/414 (47.58%), Query Frame = 1

Query: 196 LIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFG 255
           L+  +C  G V  A++L+  M  +     + + + LI      GR  EA +L   M+ +G
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205

Query: 256 RKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 315
            +P       +L    + G   LA D+   M + +I+ +   Y I++D     G  +D  
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265

Query: 316 GIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 375
            + NEM+ KG + +   YS +I    N+G W     ++ E+    I  D   ++++ID F
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325

Query: 376 GKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPDP 435
            K G+L EA E++ +M   G+ PD  T+NSLI   CK   L  A ++F  M  +G  PD 
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385

Query: 436 KIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 495
             +  LI+S  +  + D   +    +  +G   + + Y  LV  + Q G+   A++    
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445

Query: 496 LKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNLVMLNVLINAFAVAGR 555
           + S G+ PS   + I+ +     G   + +++ E M+   +   + + N++I+    A +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505

Query: 556 HLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMESAGCTPD 610
             +A +++  + + G+ PDV+TY  ++    +     +   ++++M+  GCTPD
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559

BLAST of Cp4.1LG14g05260 vs. NCBI nr
Match: gi|778690357|ref|XP_011653107.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 907.1 bits (2343), Expect = 1.7e-260
Identity = 451/518 (87.07%), Postives = 476/518 (91.89%), Query Frame = 1

Query: 110 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 169
           + M SIFLPK FIV SFGGV+S  LL R SSKCDG+YMF   I+KLFR N L   SKA +
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 170 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 229
            DN  IS+RWHGC D+EELS + CN LIRDYCKVG+VD+AMSLL+HME+VGLHA++ SYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 230 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 289
           YLIEA GNVGRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLAS V VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 290 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 349
           DI+KNQETYEILLDYH NAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 350 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 409
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYG L EALEVFK+MQQDGV+PDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 410 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 469
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLIS LGEQGKWDVI +NLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 470 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 529
            LVYEILVDIYGQYGQFQDAEKCISALKSAGLL S SNFCIIANAFA+QGLCEETVKVL+
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 530 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 589
           LMEAEGIEPNLVMLNVLINAFAVAGRH EALAIYHHI+EVGISPDVITYTTLMKA+IRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 590 KFHKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQRH 628
           KF KVPEIYKEMESAGCTPDRKAREMLKSVT +LEQRH
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 518

BLAST of Cp4.1LG14g05260 vs. NCBI nr
Match: gi|659107735|ref|XP_008453831.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 901.0 bits (2327), Expect = 1.2e-258
Identity = 453/518 (87.45%), Postives = 477/518 (92.08%), Query Frame = 1

Query: 110 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 169
           + MQSIFLPK FIV SFGG +S  LLHR SSK DG Y F  AILK FR N L   SKAA+
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 170 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 229
            DN  +S+RWHGC D+EELS + CN LI DYCKVGNVD+AMSLL+HME+VGLHA++ASYT
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 230 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 289
           YLIEA GNVGRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 290 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 349
           DI+KNQETYEILLDYH NAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 350 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 409
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYGQL EALEVFK+MQQD V+PDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 410 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 469
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLIS L EQGKWDVIK+NLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 470 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 529
            LVYEILVDIYGQYGQFQD EKCISALKSAGLLPS+SNFCIIANAFA+QGLCEETVKVL+
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 530 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 589
           LMEAEGIEPNLVMLNVLINAFAVAGRH EALAIYHHI+EVGISPDVITYTTLMKA+IRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 590 KFHKVPEIYKEMESAGCTPDRKAREMLKSVTVVLEQRH 628
           KF KVPEIYKEMESAGCTPDRKAREMLKSVT VLEQRH
Sbjct: 481 KFSKVPEIYKEMESAGCTPDRKAREMLKSVTAVLEQRH 517

BLAST of Cp4.1LG14g05260 vs. NCBI nr
Match: gi|778690367|ref|XP_011653109.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 773.5 bits (1996), Expect = 2.9e-220
Identity = 384/445 (86.29%), Postives = 406/445 (91.24%), Query Frame = 1

Query: 110 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 169
           + M SIFLPK FIV SFGGV+S  LL R SSKCDG+YMF   I+KLFR N L   SKA +
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 170 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 229
            DN  IS+RWHGC D+EELS + CN LIRDYCKVG+VD+AMSLL+HME+VGLHA++ SYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 230 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 289
           YLIEA GNVGRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLAS V VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 290 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 349
           DI+KNQETYEILLDYH NAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 350 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 409
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYG L EALEVFK+MQQDGV+PDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 410 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 469
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLIS LGEQGKWDVI +NLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 470 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 529
            LVYEILVDIYGQYGQFQDAEKCISALKSAGLL S SNFCIIANAFA+QGLCEETVKVL+
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 530 LMEAEGIEPNLVMLNVLINAFAVAG 555
           LMEAEGIEPNLVMLNVLINAFAVAG
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAG 445

BLAST of Cp4.1LG14g05260 vs. NCBI nr
Match: gi|659107741|ref|XP_008453834.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 766.5 bits (1978), Expect = 3.5e-218
Identity = 385/445 (86.52%), Postives = 407/445 (91.46%), Query Frame = 1

Query: 110 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 169
           + MQSIFLPK FIV SFGG +S  LLHR SSK DG Y F  AILK FR N L   SKAA+
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 170 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 229
            DN  +S+RWHGC D+EELS + CN LI DYCKVGNVD+AMSLL+HME+VGLHA++ASYT
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 230 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 289
           YLIEA GNVGRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 290 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 349
           DI+KNQETYEILLDYH NAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 350 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 409
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYGQL EALEVFK+MQQD V+PDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 410 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 469
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLIS L EQGKWDVIK+NLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 470 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 529
            LVYEILVDIYGQYGQFQD EKCISALKSAGLLPS+SNFCIIANAFA+QGLCEETVKVL+
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 530 LMEAEGIEPNLVMLNVLINAFAVAG 555
           LMEAEGIEPNLVMLNVLINAFAVAG
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAG 444

BLAST of Cp4.1LG14g05260 vs. NCBI nr
Match: gi|590638809|ref|XP_007029495.1| (Pentatricopeptide repeat-containing protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 658.7 bits (1698), Expect = 1.0e-185
Identity = 314/447 (70.25%), Postives = 384/447 (85.91%), Query Frame = 1

Query: 181 GCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGR 240
           G    EEL+ +L N  I+ YCK+G+VD AM L++HMEA+G H +  SY +LIE+ G+VGR
Sbjct: 67  GSNSGEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGR 126

Query: 241 TLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEI 300
           TLEAD LFQEMI  G KPR  + N LL+GFLRKGLL LA  VLV+M +  + KNQETYEI
Sbjct: 127 TLEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEI 186

Query: 301 LLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSG 360
           LLDY+ NAGRLEDTW ++NEMK KG  LNSFVYSK+I +Y++NGMW+KA+GIV+EIR+ G
Sbjct: 187 LLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKG 246

Query: 361 ISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNCKSGNLATAL 420
           IS+D+ IYNSIIDTFGKYG+L EALEVF+KM+Q+ + PDITTWNSLIQW+CK+G+L  AL
Sbjct: 247 ISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKAL 306

Query: 421 ELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNSGLVYEILVDIY 480
           ELFT+MQEQG++PDPKIF++LIS LGE GKWD+IKKN ++MK RGH++ G +Y ILVDIY
Sbjct: 307 ELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIY 366

Query: 481 GQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELMEAEGIEPNL 540
           GQYG+FQDAE CISALKS GLLPSAS FC++ANA+A+QG CE+TVKVL++MEAEGIEPN+
Sbjct: 367 GQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNI 426

Query: 541 VMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKE 600
           VMLNVLINAF +AGRH EAL+IYHHI + GISPDVITY+TLMKA+IRAKKF +VPEIY+E
Sbjct: 427 VMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYRE 486

Query: 601 MESAGCTPDRKAREMLKSVTVVLEQRH 628
           MES+GCTPDRKAR+ML++  +VLEQRH
Sbjct: 487 MESSGCTPDRKARQMLQTALMVLEQRH 513

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP413_ARATH2.2e-9538.61Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidop... [more]
PP407_ARATH9.1e-4927.63Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP402_ARATH4.8e-4233.92Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis th... [more]
RF1_ORYSI4.8e-4225.12Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
PPR12_ARATH8.2e-4225.48Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KZ91_CUCSA1.2e-26087.07Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025700 PE=4 SV=1[more]
A0A061EZY0_THECC7.2e-18670.25Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cac... [more]
B9S1X9_RICCO4.2e-17868.10Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A067DVT4_CITSI2.1e-17768.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009556mg PE=4 SV=1[more]
A0A067DMB4_CITSI2.1e-17768.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009556mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G42310.11.2e-9638.61 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39710.15.1e-5027.63 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G05670.14.6e-4325.48 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G55840.12.3e-4226.44 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22470.13.0e-4225.36 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778690357|ref|XP_011653107.1|1.7e-26087.07PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|659107735|ref|XP_008453831.1|1.2e-25887.45PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|778690367|ref|XP_011653109.1|2.9e-22086.29PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|659107741|ref|XP_008453834.1|3.5e-21886.52PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|590638809|ref|XP_007029495.1|1.0e-18570.25Pentatricopeptide repeat-containing protein, putative isoform 1 [Theobroma cacao... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g05260.1Cp4.1LG14g05260.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 510..536
score: 0.19coord: 262..288
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 538..586
score: 2.5E-9coord: 398..445
score: 2.6E-10coord: 193..234
score: 3.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 317..377
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 332..364
score: 0.0022coord: 542..575
score: 3.1E-5coord: 367..399
score: 1.1E-7coord: 576..609
score: 8.4E-10coord: 297..329
score: 6.3E-6coord: 193..222
score: 4.3E-4coord: 508..539
score: 2.6E-4coord: 402..434
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 434..468
score: 7.75coord: 329..363
score: 9.197coord: 259..293
score: 7.706coord: 224..258
score: 9.734coord: 399..433
score: 12.375coord: 574..608
score: 12.397coord: 469..503
score: 8.484coord: 364..398
score: 12.617coord: 189..223
score: 9.471coord: 539..573
score: 10.019coord: 294..328
score: 10.348coord: 504..538
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 339..598
score: 7.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 184..611
score: 1.0E
NoneNo IPR availablePANTHERPTHR24015:SF483SUBFAMILY NOT NAMEDcoord: 184..611
score: 1.0E

The following gene(s) are paralogous to this gene:

None