CSPI04G04360 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G04360
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationChr4 : 2836953 .. 2840606 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGCATTCTATTTTCTTGCCAAAAGCGTTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCATTTGTTGCAACGAGATTCTAGTAAATGCGACGGCAAGTACATGTTTGATGGTGGCATAGTGAAGTTGTTTAGGAATAATTCCCTAAATTTTGCCAGTAAAGCAGTGGTAGATGATAATTGTATTATTAGCTCAAGTTCGCATGGATGTATAGATGAAGAGGAACTATCGAGTGAGTCGTGCAACCGTTTGATTCGTGACTATTGTAAGGTAGGTGATGTTGATTCTGCTATGTCCCTTCTTGCTCATATGGAGTCTGTAGGTCTTCATGCCACTATGACGTCTTACACTTATTTGATTGAAGCTCTTGGAAACGTTGGTAGAACTTTGGAAGCTGATATCATATTCCAGGAAATGATTAGTTTTGGCTGTAAGCCAAGAACAATTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCGTCTGGGGTTCTTGTATTGATGAGTGATTTAGATATTAAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGTCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGTTGAACTCATTTGTGTATAGTAAAGTTATTGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAAATAAGAAAATCAGGGATTTCTATGGACAAACACATTTACAACAGCATCATAGATACATTTGGGAAATATGGCCACTTGTCTGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAAGATGGGGTAGTGCCTGATATAACAACTTGGAATTCATTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCTCTTGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATCTTCATTACTCTAATAAGCTTCTTGGGTGAGCAGGGAAAGTGGGATGTGATAAATCAGAATCTTGATAGTATGAAGCTCAGAGGGCACAAGAATAGTGTCCTAGTTTATGAAATTTTAGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGCATATCCGCTCTGAAGTCTGCAGGGCTTCTAGCATCTTGTAGCAATTTTTGCATTATAGCAAACGCTTTTGCTCAACAGGTTTGATGCCCATCTTTACAATTTTTTTTTTTTTTTTTGAGCTACCAAGGTTAACTGAATTTTCATGGCCCTGCTTTGTTGTCAGTTCTTTGTTCTCTGTGAAGAGAGGCTGCGTGTTTTAAATAGAAAAAGAAATAATCGATGGTGATTACTAATTTATGATAAGGGTTTTTCTTGTATTTTGGTAATCCATTACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTCATGGAAGCAGAAGGAATTGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCTTTTGCTGTTGCTGGTAGGCATTCGGAAGCGTTAGCCATTTATCATCATATAATTGAAGTCGTAAGTCTTTATGTTCGGGAATGCAAAACCAGAAGATTTAGTTAAAGCCACATGCAATCTAATTTCATCTTTTCTTTGTGTTATCAAGATAATTCTATGATTCATCCTTCTATTTTTCTTCTTCTTAATTTTGTCATATTTTTTCTGAGAAGGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTGCTAAGGTGCTTATCTCTTGACCGAGTAAATTTTTGAGCTTGATCCAAACGACCAAACCTTTAGTTTACTAGCCATTTGTCCTTATTAACACTGTTCATGTTGAAATGAGTCTTACATTCTTGTATGAAGTTGTTCAATTCTTCTTTGTGAAACCCTGCTGATACCTTCTAAGTTCCATATTTGGCTAGGTCCCTGAAATATATAAAGAAATGGAAAGTGCTGGCTGCACCCCAGATAGGAAGGCCAGAGAGATGTTAAAATCCGTAACAGCTATTCTTGAACAAAGGCATTGTAAGTTCCACCCTTTTTGTACTTGTATTTTGTATTTTCTCAGCCAGAGCAGTCCTTGCAAAATTGTTGTACAATTCTTCACCGTCTAGGCAATGGTAAATTTAGAACGTCAAGTCATAATTTGAAAAGTTCATACCTGGAGAGTGGTGCATTATGCGTCCGACAGAAAGATTCTGCTTGCAAATATTGCATTGTGTCAGGCTACAAGTTTTATTACAAGTATATTGCTACCTATTCCATAATCGGTGGCTTAGATAATTTATGTCATTTGTCAAGTCAAGTTATGTCAACCTGTAAAGACATACAAATTTTTGTCTTGTTGGCAATTATGAAGAAGGATCAAAGGAATTAAAAAAGAGGTACAGGACGGCATATTCCAAATGGTAAATGCTCATTGGAGCCCCACATCTAAATAGACACCAAAAATATGGTCTTAGGGACTAGGGCTTTTTGGGGGTTGGATTTGTAATTGATTAAAAAAAATCACTTAAAAATATTTTTTAAGCACTTAGTTGGTCATTTCAAACATGGCTAGATCGGTGGTCTTACTAGTGAATTAAGTTTTGATGCAGCTGAGTGAACGACCAAAGTGGGAGTAAATTTTCCGGTGCCTTTATTTTGCAAATGATGAATACTGTAATCTACTTTAGATCTTTCAATAAGAACCCAAGGAGAGCATAACCAGCCCCCTAGTAGTTTATATTATATGCCCTCTCCCAGCCTTCCGATTGACTCGTGGTTTGGGAATAAAATCATTGGTTAAAAAACACTGTTTCTTATACCTACGGTCACATTTCTTTGTGTGTGTGTTTTAATTAGAGAAAGACAGCAACTGATACTTGCTAGTGTGGAGTTCTTGAATGTTTGGATCTTTTTCTTTGAAAAACAGACAGATAAAAAGAAATTAGCAGCCTTCTAAAATATTGATTGAGGAAGTGATACACACCAAGAAAATAGATCATAATGCCAGGTAAATCCAACTCTTTTGTCTTAGGTTTGATGTGAATTTATGGATATTCTGATGAAGCAGTATTAATTATACGTCTTAGCAGTTTATGACGATATCAATGAAAGGCCAACCTTCAATGGATCCGGGGGAACTAAAGGAATATGGCAGTTTCTGGCGGTAAGTTTGAAGATGAAACGAGGTTGATCTTGCTTGTCGTAAATAGTAATGCAATTCAACCAATGAAAAAGCTCATCCAAATTATAGAGCTCTGACACAGTCAAACTTGAACGAACAAACTGTTGAATTGAATCTTACCTGTCTTTACTAGAGGTAATTACTCATTTTTTTACTTTATTTTATTTTTCAATTATTTCTTCAATTTAAATAAAGAAAATAACTAAATAATAGTACAAATATTCTTATCTCATTTGGAAGGATATTATCTAATAACTATCTATGATTGTTTCTGTCTGTAGCGTAACCACTTGATGAAATGGGGGAAGAAAGTGGGACAAATGGCCAAGACAACTGCAAGGCTTTCTTATTGGATAATAGGTACTGTAATTGATATTCTATGTCGGTTTAGTCATCATTACGATATTCTATGGTCGGTTTAG

mRNA sequence

ATGAAGATGCATTCTATTTTCTTGCCAAAAGCGTTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCATTTGTTGCAACGAGATTCTAGTAAATGCGACGGCAAGTACATGTTTGATGGTGGCATAGTGAAGTTGTTTAGGAATAATTCCCTAAATTTTGCCAGTAAAGCAGTGGTAGATGATAATTGTATTATTAGCTCAAGTTCGCATGGATGTATAGATGAAGAGGAACTATCGAGTGAGTCGTGCAACCGTTTGATTCGTGACTATTGTAAGGTAGGTGATGTTGATTCTGCTATGTCCCTTCTTGCTCATATGGAGTCTGTAGGTCTTCATGCCACTATGACGTCTTACACTTATTTGATTGAAGCTCTTGGAAACGTTGGTAGAACTTTGGAAGCTGATATCATATTCCAGGAAATGATTAGTTTTGGCTGTAAGCCAAGAACAATTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCGTCTGGGGTTCTTGTATTGATGAGTGATTTAGATATTAAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGTCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGTTGAACTCATTTGTGTATAGTAAAGTTATTGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAAATAAGAAAATCAGGGATTTCTATGGACAAACACATTTACAACAGCATCATAGATACATTTGGGAAATATGGCCACTTGTCTGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAAGATGGGGTAGTGCCTGATATAACAACTTGGAATTCATTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCTCTTGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATCTTCATTACTCTAATAAGCTTCTTGGGTGAGCAGGGAAAGTGGGATGTGATAAATCAGAATCTTGATAGTATGAAGCTCAGAGGGCACAAGAATAGTGTCCTAGTTTATGAAATTTTAGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGCATATCCGCTCTGAAGTCTGCAGGGCTTCTAGCATCTTGTAGCAATTTTTGCATTATAGCAAACGCTTTTGCTCAACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTCATGGAAGCAGAAGGAATTGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCTTTTGCTGTTGCTGGTAGGCATTCGGAAGCGTTAGCCATTTATCATCATATAATTGAAGTCGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTGCTAAGGTCCCTGAAATATATAAAGAAATGGAAAGTGCTGGCTGCACCCCAGATAGGAAGGCCAGAGAGATGTTAAAATCCGTAACAGCTATTCTTGAACAAAGGCATTGCAATGGTAAATTTAGAACGTCAAGTCATAATTTGAAAAGTTCATACCTGGAGAGTGGTGCATTATGCGTCCGACAGAAAGATTCTGCTTGCAAATATTGCATTGTGTCAGGCTACAAGTTTTATTACAAGTATATTGCTACCTATTCCATAATCGCAGTTTATGACGATATCAATGAAAGGCCAACCTTCAATGGATCCGGGGGAACTAAAGGAATATGGCAGTTTCTGGCGCGTAACCACTTGATGAAATGGGGGAAGAAAGTGGGACAAATGGCCAAGACAACTGCAAGGCTTTCTTATTGGATAATAGGTACTGTAATTGATATTCTATGTCGGTTTAGTCATCATTACGATATTCTATGGTCGGTTTAG

Coding sequence (CDS)

ATGAAGATGCATTCTATTTTCTTGCCAAAAGCGTTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCATTTGTTGCAACGAGATTCTAGTAAATGCGACGGCAAGTACATGTTTGATGGTGGCATAGTGAAGTTGTTTAGGAATAATTCCCTAAATTTTGCCAGTAAAGCAGTGGTAGATGATAATTGTATTATTAGCTCAAGTTCGCATGGATGTATAGATGAAGAGGAACTATCGAGTGAGTCGTGCAACCGTTTGATTCGTGACTATTGTAAGGTAGGTGATGTTGATTCTGCTATGTCCCTTCTTGCTCATATGGAGTCTGTAGGTCTTCATGCCACTATGACGTCTTACACTTATTTGATTGAAGCTCTTGGAAACGTTGGTAGAACTTTGGAAGCTGATATCATATTCCAGGAAATGATTAGTTTTGGCTGTAAGCCAAGAACAATTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCGTCTGGGGTTCTTGTATTGATGAGTGATTTAGATATTAAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGTCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGTTGAACTCATTTGTGTATAGTAAAGTTATTGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAAATAAGAAAATCAGGGATTTCTATGGACAAACACATTTACAACAGCATCATAGATACATTTGGGAAATATGGCCACTTGTCTGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAAGATGGGGTAGTGCCTGATATAACAACTTGGAATTCATTGATACAATGGAACTGTAAATCTGGGAACCTTGCTACTGCTCTTGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATCTTCATTACTCTAATAAGCTTCTTGGGTGAGCAGGGAAAGTGGGATGTGATAAATCAGAATCTTGATAGTATGAAGCTCAGAGGGCACAAGAATAGTGTCCTAGTTTATGAAATTTTAGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGCATATCCGCTCTGAAGTCTGCAGGGCTTCTAGCATCTTGTAGCAATTTTTGCATTATAGCAAACGCTTTTGCTCAACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTCATGGAAGCAGAAGGAATTGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCTTTTGCTGTTGCTGGTAGGCATTCGGAAGCGTTAGCCATTTATCATCATATAATTGAAGTCGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTGCTAAGGTCCCTGAAATATATAAAGAAATGGAAAGTGCTGGCTGCACCCCAGATAGGAAGGCCAGAGAGATGTTAAAATCCGTAACAGCTATTCTTGAACAAAGGCATTGCAATGGTAAATTTAGAACGTCAAGTCATAATTTGAAAAGTTCATACCTGGAGAGTGGTGCATTATGCGTCCGACAGAAAGATTCTGCTTGCAAATATTGCATTGTGTCAGGCTACAAGTTTTATTACAAGTATATTGCTACCTATTCCATAATCGCAGTTTATGACGATATCAATGAAAGGCCAACCTTCAATGGATCCGGGGGAACTAAAGGAATATGGCAGTTTCTGGCGCGTAACCACTTGATGAAATGGGGGAAGAAAGTGGGACAAATGGCCAAGACAACTGCAAGGCTTTCTTATTGGATAATAGGTACTGTAATTGATATTCTATGTCGGTTTAGTCATCATTACGATATTCTATGGTCGGTTTAG
Homology
[Close]
BLAST of CSPI04G04360 vs. Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 8.6e-95
Identity = 175/442 (39.59%), Postives = 272/442 (61.54%), Query Frame = 1 

Query: 75  DEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE 134
           D+ EL  +  N +I  + K GD   A+ LL   ++ GL A   +   +I AL + GRTLE
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322

Query: 135 ADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLD 194
           A+ +F+E+   G KPRT   NALL+G+++ G L  A  ++  M    +  ++ TY +L+D
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382

Query: 195 YHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISM 254
            +VNAGR E    ++ EM+    + NSFV+S+++  +++ G W+K   ++ E++  G+  
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442

Query: 255 DKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELF 314
           D+  YN +IDTFGK+  L  A+  F RM  +G+ PD  TWN+LI  +CK G    A E+F
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502

Query: 315 TDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQY 374
             M+ +G  P    +  +I+  G+Q +WD + + L  MK +G   +V+ +  LVD+YG+ 
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562

Query: 375 GQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVML 434
           G+F DA +C+  +KS GL  S + +  + NA+AQ+GL E+ V   ++M ++G++P+L+ L
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622

Query: 435 NVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMES 494
           N LINAF    R +EA A+  ++ E G+ PDV+TYTTLMKA IR  KF KVP +Y+EM  
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682

Query: 495 AGCTPDRKAREMLKSVTAILEQ 517
           +GC PDRKAR ML+S    ++Q
Sbjct: 683 SGCKPDRKARSMLRSALRYMKQ 704

[Close]
BLAST of CSPI04G04360 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-47
Identity = 111/415 (26.75%), Postives = 206/415 (49.64%), Query Frame = 1 

Query: 87  LIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE-ADIIFQEMISF 146
           +++ Y ++  +D A+S++   ++ G    + SY  +++A     R +  A+ +F+EM+  
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 147 GCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYHVNAGRLEDT 206
              P     N L+RGF   G +D+A  +   M       N  TY  L+D +    +++D 
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 207 WSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDT 266
           + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S+D+  YN++I  
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319

Query: 267 FGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPD 326
           + K G+  +AL +   M + G+ P + T+ SLI   CK+GN+  A+E    M+ +G+ P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 327 PKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCIS 386
            + + TL+    ++G  +   + L  M   G   SV+ Y  L++ +   G+ +DA   + 
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 387 ALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAG 446
            +K  GL     ++  + + F +    +E ++V + M  +GI+P+ +  + LI  F    
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 447 RHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPD 501
           R  EA  +Y  ++ VG+ PD  TYT L+ A+       K  +++ EM   G  PD
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

[Close]
BLAST of CSPI04G04360 vs. Swiss-Prot
Match: PP402_ARATH (Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis thaliana GN=At5g36300 PE=3 SV=3)

HSP 1 Score: 185.3 bits (469), Expect = 2.1e-45
Identity = 110/319 (34.48%), Postives = 170/319 (53.29%), Query Frame = 1 

Query: 74  IDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTL 133
           I    +S    N  IR +C+ G+ + AMSLLA + S+G      SY   IE L ++    
Sbjct: 4   ISHTRISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLR--- 63

Query: 134 EADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILL 193
                           RT+  +AL    +R           ++     ++     Y  L+
Sbjct: 64  ----------------RTLEADALFHEVVR----------FMIYGSYSVR----LYNALV 123

Query: 194 DYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGIS 253
             ++   R E +W ++NEMK++ F LNSFVY K+I IY++NGMWKKA+GIV+EIR+ G+ 
Sbjct: 124 SRYL---RKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLP 183

Query: 254 MDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDG-VVPDITTWNSLIQWNCKSGNLATALE 313
           MD  IYNS+IDTFGKYG L E L+V +++Q+     P+I TWNSLI+W+C  G +  ALE
Sbjct: 184 MDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALE 243

Query: 314 LFT-----------DMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSV 373
           LFT            ++ QG+ P   +F TL +   +QG      + L  M+  G + ++
Sbjct: 244 LFTMIFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNL 286

Query: 374 LVYEILVDIYGQYGQFQDA 381
           ++  +L++ +G  G+  +A
Sbjct: 304 IMLNVLINAFGTAGKHMEA 286

[Close]
BLAST of CSPI04G04360 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.9e-44
Identity = 105/414 (25.36%), Postives = 202/414 (48.79%), Query Frame = 1 

Query: 83  SCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEM 142
           S   +I  + K GD D A S    M   G+   + +Y  +I AL       +A  +   M
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 143 ISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYHVNAGRL 202
           +  G  P  +  N++L G+   G    A G L  M    ++ +  TY +L+DY    GR 
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 203 EDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSI 262
            +   I + M ++G +     Y  ++  Y   G   +  G++D + ++GI  D ++++ +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 263 IDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGM 322
           I  + K G + +A+ VF +M+Q G+ P+  T+ ++I   CKSG +  A+  F  M ++G+
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 323 HPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEK 382
            P   ++ +LI  L    KW+   + +  M  RG   + + +  ++D + + G+  ++EK
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 383 CISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFA 442
               +   G+  +   +  + N +   G  +E +K+L  M + G++PN V  + LIN + 
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 443 VAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAG 497
              R  +AL ++  +   G+SPD+ITY  +++   + ++ A   E+Y  +  +G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

[Close]
BLAST of CSPI04G04360 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 7.6e-43
Identity = 107/420 (25.48%), Postives = 205/420 (48.81%), Query Frame = 1 

Query: 83  SCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEM 142
           S + ++  YC+ G++D    L+  M+  GL      Y  +I  L  + +  EA+  F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342

Query: 143 ISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYHVNAGRL 202
           I  G  P T+V   L+ GF ++G +  AS     M   DI  +  TY  ++      G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402

Query: 203 EDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSI 262
            +   + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462

Query: 263 IDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGM 322
           ID   K G L  A E+   M + G+ P+I T+NS++   CKSGN+  A++L  + +  G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 323 HPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEK 382
           + D   + TL+    + G+ D   + L  M  +G + +++ + +L++ +  +G  +D EK
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 383 CISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFA 442
            ++ + + G+  + + F  +   +  +   +    + + M + G+ P+      L+    
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642

Query: 443 VAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRK 502
            A    EA  ++  +   G S  V TY+ L+K F++ KKF +  E++ +M   G   D++
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702

[Close]
BLAST of CSPI04G04360 vs. TrEMBL
Match: A0A0A0KZ91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025700 PE=4 SV=1)

HSP 1 Score: 1023.8 bits (2646), Expect = 8.7e-296
Identity = 513/518 (99.03%), Postives = 514/518 (99.23%), Query Frame = 1 

Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRDSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKMHSIFLPKAFIVSSFGGVFSDHLLQR SSKCDGKYMFDGGIVKLFRNNSLNFASKAVV
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 61  DDNCIISSSSHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCIISS  HGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 518

[Close]
BLAST of CSPI04G04360 vs. TrEMBL
Match: A0A061EZY0_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_025371 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 4.8e-185
Identity = 313/442 (70.81%), Postives = 381/442 (86.20%), Query Frame = 1 

Query: 77  EELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEAD 136
           EEL+SE  N+ I+ YCK+GDVD+AM L+AHME++G H    SY +LIE+LG+VGRTLEAD
Sbjct: 72  EELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEAD 131

Query: 137 IIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYH 196
            +FQEMI  G KPR  + N LL+GFLRKGLL LA  VLV+M +  + KNQETYEILLDY+
Sbjct: 132 ALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYY 191

Query: 197 VNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDK 256
           VNAGRLEDTW ++NEMK KG  LNSFVYSK+I +Y++NGMW+KA+GIV+EIR+ GIS+D+
Sbjct: 192 VNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251

Query: 257 HIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTD 316
            IYNSIIDTFGKYG LSEALEVF++M+Q+ + PDITTWNSLIQW+CK+G+L  ALELFT+
Sbjct: 252 QIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTE 311

Query: 317 MQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQ 376
           MQEQG++PDPKIF++LIS LGE GKWD+I +N ++MK RGH++   +Y ILVDIYGQYG+
Sbjct: 312 MQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGR 371

Query: 377 FQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNV 436
           FQDAE CISALKS GLL S S FC++ANA+AQQG CE+TVKVLQ+MEAEGIEPN+VMLNV
Sbjct: 372 FQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLNV 431

Query: 437 LINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAG 496
           LINAF +AGRH EAL+IYHHI + GISPDVITY+TLMKAFIRAKKF +VPEIY+EMES+G
Sbjct: 432 LINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYREMESSG 491

Query: 497 CTPDRKAREMLKSVTAILEQRH 519
           CTPDRKAR+ML++   +LEQRH
Sbjct: 492 CTPDRKARQMLQTALMVLEQRH 513

[Close]
BLAST of CSPI04G04360 vs. TrEMBL
Match: B9S1X9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1323900 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 6.7e-179
Identity = 304/443 (68.62%), Postives = 374/443 (84.42%), Query Frame = 1 

Query: 77  EELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEAD 136
           +ELS ES N  I D CKVGDVD AM+LLA M+S+G H +  SYT LIE L +VGRTLEA+
Sbjct: 17  QELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAE 76

Query: 137 IIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYH 196
            ++QEM+ FG KPR  + N +LRGFL+KGLL +A  VL ++ DL + +NQETYEILLDY+
Sbjct: 77  ALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYN 136

Query: 197 VNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDK 256
           VNAGRLEDTWS+INEMK+KGF+LNSFVYSKVI +Y++NGMWKKA+GI++EIR+ G+ +DK
Sbjct: 137 VNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDK 196

Query: 257 HIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTD 316
           HIYNSIIDTFGKYG L EALEV   MQQ G+ PDI TWNSLI+W+CK+GNL+ ALELF+ 
Sbjct: 197 HIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSK 256

Query: 317 MQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQ 376
           MQ QG++PDPKI +T+IS L EQGKW++I +N D MK  G+K S  +Y ILVDIYGQYG+
Sbjct: 257 MQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGR 316

Query: 377 FQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNV 436
           FQDAE+CISALKS G+L S S FC++ANA+AQQGLCE+TVKVLQLMEAEGIEPNL+MLNV
Sbjct: 317 FQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNV 376

Query: 437 LINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAG 496
           LINAF +AGRH EAL+IYHH+ E GISPDV+TY+TLMKA+IRA+KF +VPEIY EMES+G
Sbjct: 377 LINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSG 436

Query: 497 CTPDRKAREMLKSVTAILEQRHC 520
           CTPD+KARE+L++   +L +R+C
Sbjct: 437 CTPDKKAREILQAALMVLGRRNC 459

[Close]
BLAST of CSPI04G04360 vs. TrEMBL
Match: A0A067DMB4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009556mg PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 5.3e-176
Identity = 305/451 (67.63%), Postives = 372/451 (82.48%), Query Frame = 1 

Query: 69  SSHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGN 128
           S  G    EE S  S N+ I+  CK+GD+D AM+LLA M+++G H +  SY  LIEAL +
Sbjct: 65  SPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALAS 124

Query: 129 VGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQET 188
           VGRTLEAD IFQEM+ FG  P+    N LLRGFL+KGLL L S +L++M D+ I +NQET
Sbjct: 125 VGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQET 184

Query: 189 YEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIR 248
           YEILLDYHVNAGRL+DTW IINEM+ KGF+LNSFVY KVI +Y++NGMWKKAVGIV+EIR
Sbjct: 185 YEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIR 244

Query: 249 KSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLA 308
           + G+S+D+ IYNSIIDTFGKYG L EALEVF++MQQ+ + PDI TWNSLI+W+CK+G++A
Sbjct: 245 EMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVA 304

Query: 309 TALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILV 368
            ALELFT MQEQG +PDPKIFIT+IS LGE GKWDVI +N ++MK RGH     +Y ILV
Sbjct: 305 KALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILV 364

Query: 369 DIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIE 428
           DIYGQYG+F+D E+CI+ALK  GL  S S FCI+ANA+AQQGLCE+TVKVLQLME EGIE
Sbjct: 365 DIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIE 424

Query: 429 PNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEI 488
           PNLVMLNVLINAF VAG++ EAL++YH + ++GISPD++TY+TLMKAFIRAKKF KVPEI
Sbjct: 425 PNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEI 484

Query: 489 YKEMESAGCTPDRKAREMLKSVTAILEQRHC 520
           YK+MES+GCTPDRKAR++L+S   +LEQR C
Sbjct: 485 YKQMESSGCTPDRKARQILQSALVVLEQRRC 515

[Close]
BLAST of CSPI04G04360 vs. TrEMBL
Match: A0A0B0MP29_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26634 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 2.0e-175
Identity = 297/443 (67.04%), Postives = 373/443 (84.20%), Query Frame = 1 

Query: 77  EELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEAD 136
           EELS+E  N+ I++YCK+GDVD+AM L+A +E++G H    SY +LI++LG+VGRTLEAD
Sbjct: 70  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 129

Query: 137 IIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYH 196
           ++FQEM+  G KPR  + NALL+GFL+KGLL LA   LV M  + + KNQETYEILLDY+
Sbjct: 130 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 189

Query: 197 VNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDK 256
           V+AGRLEDTW ++NEMK  G +L+SFVY KVI +Y++NGMWKKA+G+V+EIR+ GIS+D+
Sbjct: 190 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249

Query: 257 HIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTD 316
            IYNSIIDTFGKYG L EALEVF++M+Q+ ++PDITTWNSLI+W+CK+G+L  AL+LFT+
Sbjct: 250 QIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQLFTE 309

Query: 317 MQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQ 376
           MQEQG++PDPKI ++LIS LGE GKWDVI +N ++MK RG +    +Y +LVDIYGQYG+
Sbjct: 310 MQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMKCRGRQEVGAIYAMLVDIYGQYGR 369

Query: 377 FQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNV 436
           FQDAE  I+ALKS G L S S FC++ANA+AQQG CE+TVKVLQLMEAEGIE N++MLNV
Sbjct: 370 FQDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNV 429

Query: 437 LINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAG 496
           LINAF +AGRH EAL+IY HI E GISPDV+TY+TLMKAFIRAKKF KVPEIYKEMES G
Sbjct: 430 LINAFGIAGRHEEALSIYQHIRESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYG 489

Query: 497 CTPDRKAREMLKSVTAILEQRHC 520
           CTPDRKAR+ML++   +LE+RHC
Sbjct: 490 CTPDRKARQMLQTALMVLERRHC 512

[Close]
BLAST of CSPI04G04360 vs. TAIR10
Match: AT5G42310.1 (AT5G42310.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 349.4 bits (895), Expect = 4.8e-96
Identity = 175/442 (39.59%), Postives = 272/442 (61.54%), Query Frame = 1 

Query: 75  DEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE 134
           D+ EL  +  N +I  + K GD   A+ LL   ++ GL A   +   +I AL + GRTLE
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322

Query: 135 ADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLD 194
           A+ +F+E+   G KPRT   NALL+G+++ G L  A  ++  M    +  ++ TY +L+D
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382

Query: 195 YHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISM 254
            +VNAGR E    ++ EM+    + NSFV+S+++  +++ G W+K   ++ E++  G+  
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442

Query: 255 DKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELF 314
           D+  YN +IDTFGK+  L  A+  F RM  +G+ PD  TWN+LI  +CK G    A E+F
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502

Query: 315 TDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQY 374
             M+ +G  P    +  +I+  G+Q +WD + + L  MK +G   +V+ +  LVD+YG+ 
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562

Query: 375 GQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVML 434
           G+F DA +C+  +KS GL  S + +  + NA+AQ+GL E+ V   ++M ++G++P+L+ L
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622

Query: 435 NVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMES 494
           N LINAF    R +EA A+  ++ E G+ PDV+TYTTLMKA IR  KF KVP +Y+EM  
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682

Query: 495 AGCTPDRKAREMLKSVTAILEQ 517
           +GC PDRKAR ML+S    ++Q
Sbjct: 683 SGCKPDRKARSMLRSALRYMKQ 704

[Close]
BLAST of CSPI04G04360 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 192.6 bits (488), Expect = 7.6e-49
Identity = 111/415 (26.75%), Postives = 206/415 (49.64%), Query Frame = 1 

Query: 87  LIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLE-ADIIFQEMISF 146
           +++ Y ++  +D A+S++   ++ G    + SY  +++A     R +  A+ +F+EM+  
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 147 GCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYHVNAGRLEDT 206
              P     N L+RGF   G +D+A  +   M       N  TY  L+D +    +++D 
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 207 WSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDT 266
           + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S+D+  YN++I  
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319

Query: 267 FGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHPD 326
           + K G+  +AL +   M + G+ P + T+ SLI   CK+GN+  A+E    M+ +G+ P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 327 PKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCIS 386
            + + TL+    ++G  +   + L  M   G   SV+ Y  L++ +   G+ +DA   + 
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 387 ALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAG 446
            +K  GL     ++  + + F +    +E ++V + M  +GI+P+ +  + LI  F    
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 447 RHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPD 501
           R  EA  +Y  ++ VG+ PD  TYT L+ A+       K  +++ EM   G  PD
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

[Close]
BLAST of CSPI04G04360 vs. TAIR10
Match: AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 176.8 bits (447), Expect = 4.3e-44
Identity = 107/420 (25.48%), Postives = 205/420 (48.81%), Query Frame = 1 

Query: 83  SCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEM 142
           S + ++  YC+ G++D    L+  M+  GL      Y  +I  L  + +  EA+  F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342

Query: 143 ISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYHVNAGRL 202
           I  G  P T+V   L+ GF ++G +  AS     M   DI  +  TY  ++      G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402

Query: 203 EDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSI 262
            +   + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462

Query: 263 IDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGM 322
           ID   K G L  A E+   M + G+ P+I T+NS++   CKSGN+  A++L  + +  G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 323 HPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEK 382
           + D   + TL+    + G+ D   + L  M  +G + +++ + +L++ +  +G  +D EK
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 383 CISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFA 442
            ++ + + G+  + + F  +   +  +   +    + + M + G+ P+      L+    
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642

Query: 443 VAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRK 502
            A    EA  ++  +   G S  V TY+ L+K F++ KKF +  E++ +M   G   D++
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702

[Close]
BLAST of CSPI04G04360 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 4.8e-43
Identity = 113/439 (25.74%), Postives = 196/439 (44.65%), Query Frame = 1 

Query: 122 LIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLD 181
           +I  LG  GR   A  +F  +   G         +L+  F   G    A  V   M +  
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238

Query: 182 IKKNQETYEILLDYHVNAGRLEDTW----SIINEMKRKGFELNSFVYSKVIVIYQNNGMW 241
            K    TY ++L+     G++   W    S++ +MK  G   +++ Y+ +I   +   + 
Sbjct: 239 CKPTLITYNVILNVF---GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 298

Query: 242 KKAVGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSL 301
           ++A  + +E++ +G S DK  YN+++D +GK     EA++V   M  +G  P I T+NSL
Sbjct: 299 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 358

Query: 302 IQWNCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGH 361
           I    + G L  A+EL   M E+G  PD   + TL+S     GK +      + M+  G 
Sbjct: 359 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 418

Query: 362 KNSVLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVK 421
           K ++  +   + +YG  G+F +  K    +   GL      +  +   F Q G+  E   
Sbjct: 419 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 478

Query: 422 VLQLMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFI 481
           V + M+  G  P     N LI+A++  G   +A+ +Y  +++ G++PD+ TY T++ A  
Sbjct: 479 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 538

Query: 482 RAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRHCNGKFRTSSHNLK----SS 541
           R   + +  ++  EME   C P+       +     L   + NGK     H+L     S 
Sbjct: 539 RGGMWEQSEKVLAEMEDGRCKPN-------ELTYCSLLHAYANGKEIGLMHSLAEEVYSG 598

Query: 542 YLESGALCVRQKDSACKYC 553
            +E  A+ ++     C  C
Sbjct: 599 VIEPRAVLLKTLVLVCSKC 607

[Close]
BLAST of CSPI04G04360 vs. TAIR10
Match: AT5G55840.1 (AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 169.1 bits (427), Expect = 9.0e-42
Identity = 108/416 (25.96%), Postives = 186/416 (44.71%), Query Frame = 1 

Query: 85  NRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEADIIFQEMIS 144
           N ++  YCK G   +A+ LL HM+S G+ A + +Y  LI  L    R  +  ++ ++M  
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 145 FGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYHVNAGRLED 204
               P  +  N L+ GF  +G + +AS +L  M    +  N  T+  L+D H++ G  ++
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 205 TWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIID 264
              +   M+ KG   +   Y  ++     N  +  A G    ++++G+ + +  Y  +ID
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 265 TFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTDMQEQGMHP 324
              K G L EA+ +   M +DG+ PDI T+++LI   CK G   TA E+   +   G+ P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511

Query: 325 DPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDAEKCI 384
           +  I+ TLI      G      +  ++M L GH      + +LV    + G+  +AE+ +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 385 SALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVA 444
             + S G+L +  +F  + N +   G   +   V   M   G  P       L+      
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 445 GRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPD 501
           G   EA      +  V  + D + Y TL+ A  ++   AK   ++ EM      PD
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687

[Close]
BLAST of CSPI04G04360 vs. NCBI nr
Match: gi|778690357|ref|XP_011653107.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 1023.8 bits (2646), Expect = 1.3e-295
Identity = 513/518 (99.03%), Postives = 514/518 (99.23%), Query Frame = 1 

Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRDSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKMHSIFLPKAFIVSSFGGVFSDHLLQR SSKCDGKYMFDGGIVKLFRNNSLNFASKAVV
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 61  DDNCIISSSSHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCIISS  HGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH
Sbjct: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 518

[Close]
BLAST of CSPI04G04360 vs. NCBI nr
Match: gi|659107735|ref|XP_008453831.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 968.8 bits (2503), Expect = 4.8e-279
Identity = 490/518 (94.59%), Postives = 496/518 (95.75%), Query Frame = 1 

Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRDSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM SIFLPKAFIVSSFGG FSDHLL RDSSK DG Y FDG I+K FRNN LN ASKA V
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISSSSHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCI+SS  HGCIDEEELSSESCNRLI DYCKVG+VDSAMSLLAHMESVGLHATM SYT
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYG LSEALEVFKRMQQD VVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLISFL EQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQD EKCISALKSAGLL S SNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 519
           KF+KVPEIYKEMESAGCTPDRKAREMLKSVTA+LEQRH
Sbjct: 481 KFSKVPEIYKEMESAGCTPDRKAREMLKSVTAVLEQRH 517

[Close]
BLAST of CSPI04G04360 vs. NCBI nr
Match: gi|778690367|ref|XP_011653109.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 882.9 bits (2280), Expect = 3.5e-253
Identity = 441/448 (98.44%), Postives = 442/448 (98.66%), Query Frame = 1 

Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRDSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKMHSIFLPKAFIVSSFGGVFSDHLLQR SSKCDGKYMFDGGIVKLFRNNSLNFASKAVV
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 61  DDNCIISSSSHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCIISS  HGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLASGV VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHS 449
           LMEAEGIEPNLVMLNVLINAFAVAG  S
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGYQS 448

[Close]
BLAST of CSPI04G04360 vs. NCBI nr
Match: gi|659107741|ref|XP_008453834.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 828.9 bits (2140), Expect = 5.9e-237
Identity = 420/448 (93.75%), Postives = 424/448 (94.64%), Query Frame = 1 

Query: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRDSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
           MKM SIFLPKAFIVSSFGG FSDHLL RDSSK DG Y FDG I+K FRNN LN ASKA V
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISSSSHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
           DDNCI+SS  HGCIDEEELSSESCNRLI DYCKVG+VDSAMSLLAHMESVGLHATM SYT
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
           YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
           VGIVDEIRKSGISMDKHIYNSIIDTFGKYG LSEALEVFKRMQQD VVPDITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIFITLISFL EQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
           VLVYEILVDIYGQYGQFQD EKCISALKSAGLL S SNFCIIANAFAQQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHS 449
           LMEAEGIEPNLVMLNVLINAFAVAG  S
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGYQS 447

[Close]
BLAST of CSPI04G04360 vs. NCBI nr
Match: gi|590638809|ref|XP_007029495.1| (Pentatricopeptide repeat-containing protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 656.0 bits (1691), Expect = 6.9e-185
Identity = 313/442 (70.81%), Postives = 381/442 (86.20%), Query Frame = 1 

Query: 77  EELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEAD 136
           EEL+SE  N+ I+ YCK+GDVD+AM L+AHME++G H    SY +LIE+LG+VGRTLEAD
Sbjct: 72  EELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEAD 131

Query: 137 IIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKKNQETYEILLDYH 196
            +FQEMI  G KPR  + N LL+GFLRKGLL LA  VLV+M +  + KNQETYEILLDY+
Sbjct: 132 ALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYY 191

Query: 197 VNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDK 256
           VNAGRLEDTW ++NEMK KG  LNSFVYSK+I +Y++NGMW+KA+GIV+EIR+ GIS+D+
Sbjct: 192 VNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251

Query: 257 HIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQWNCKSGNLATALELFTD 316
            IYNSIIDTFGKYG LSEALEVF++M+Q+ + PDITTWNSLIQW+CK+G+L  ALELFT+
Sbjct: 252 QIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTE 311

Query: 317 MQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNSVLVYEILVDIYGQYGQ 376
           MQEQG++PDPKIF++LIS LGE GKWD+I +N ++MK RGH++   +Y ILVDIYGQYG+
Sbjct: 312 MQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGR 371

Query: 377 FQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNV 436
           FQDAE CISALKS GLL S S FC++ANA+AQQG CE+TVKVLQ+MEAEGIEPN+VMLNV
Sbjct: 372 FQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLNV 431

Query: 437 LINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAG 496
           LINAF +AGRH EAL+IYHHI + GISPDVITY+TLMKAFIRAKKF +VPEIY+EMES+G
Sbjct: 432 LINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYREMESSG 491

Query: 497 CTPDRKAREMLKSVTAILEQRH 519
           CTPDRKAR+ML++   +LEQRH
Sbjct: 492 CTPDRKARQMLQTALMVLEQRH 513

The following BLAST results are available for this feature:
BLAST of CSPI04G04360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP413_ARATH8.6e-9539.59Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidop... [more]
PP407_ARATH1.3e-4726.75Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP402_ARATH2.1e-4534.48Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis th... [more]
RF1_ORYSI6.9e-4425.36Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
PPR12_ARATH7.6e-4325.48Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
BLAST of CSPI04G04360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ91_CUCSA8.7e-29699.03Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025700 PE=4 SV=1[more]
A0A061EZY0_THECC4.8e-18570.81Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cac... [more]
B9S1X9_RICCO6.7e-17968.62Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A067DMB4_CITSI5.3e-17667.63Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009556mg PE=4 SV=1[more]
A0A0B0MP29_GOSAR2.0e-17567.04Uncharacterized protein OS=Gossypium arboreum GN=F383_26634 PE=4 SV=1[more]
BLAST of CSPI04G04360 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42310.14.8e-9639.59 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39710.17.6e-4926.75 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G05670.14.3e-4425.48 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G02860.14.8e-4325.74 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G55840.19.0e-4225.96 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CSPI04G04360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690357|ref|XP_011653107.1|1.3e-29599.03PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|659107735|ref|XP_008453831.1|4.8e-27994.59PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|778690367|ref|XP_011653109.1|3.5e-25398.44PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|659107741|ref|XP_008453834.1|5.9e-23793.75PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-... [more]
gi|590638809|ref|XP_007029495.1|6.9e-18570.81Pentatricopeptide repeat-containing protein, putative isoform 1 [Theobroma cacao... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G04360.1CSPI04G04360.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 153..179
score: 0.29coord: 401..427
score: 0.48coord: 258..287
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 185..228
score: 1.1E-7coord: 429..477
score: 4.9E-10coord: 289..333
score: 8.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 83..128
score: 5.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 118..149
score: 6.3E-5coord: 293..325
score: 1.4E-6coord: 399..430
score: 5.9E-4coord: 223..255
score: 0.0023coord: 433..466
score: 8.0E-6coord: 258..291
score: 1.5E-9coord: 467..500
score: 7.5E-9coord: 188..220
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 150..184
score: 7.541coord: 220..254
score: 9.219coord: 430..464
score: 10.435coord: 255..289
score: 12.923coord: 360..394
score: 7.881coord: 325..359
score: 7.037coord: 115..149
score: 10.358coord: 290..324
score: 12.375coord: 185..219
score: 10.446coord: 80..114
score: 10.117coord: 465..499
score: 12.014coord: 395..429
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 230..490
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 75..502
score: 3.9E
NoneNo IPR availablePANTHERPTHR24015:SF483SUBFAMILY NOT NAMEDcoord: 75..502
score: 3.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G04360Cla010688Watermelon (97103) v1cpiwmB315
CSPI04G04360Csa4G025700Cucumber (Chinese Long) v2cpicuB182
CSPI04G04360MELO3C017621Melon (DHL92) v3.5.1cpimeB310
CSPI04G04360ClCG07G017250Watermelon (Charleston Gray)cpiwcgB336
CSPI04G04360Lsi07G001420Bottle gourd (USVL1VR-Ls)cpilsiB303
CSPI04G04360MELO3C017621.2Melon (DHL92) v3.6.1cpimedB301
CSPI04G04360CsaV3_4G004450Cucumber (Chinese Long) v3cpicucB213
CSPI04G04360Cla97C07G144270Watermelon (97103) v2cpiwmbB326
CSPI04G04360Bhi01G001981Wax gourdcpiwgoB378
CSPI04G04360Cucsa.093880Cucumber (Gy14) v1cgycpiB103
CSPI04G04360CmaCh16G002340Cucurbita maxima (Rimu)cmacpiB337
CSPI04G04360Cp4.1LG14g05260Cucurbita pepo (Zucchini)cpecpiB220
CSPI04G04360CsGy4G004270Cucumber (Gy14) v2cgybcpiB168
CSPI04G04360Carg16776Silver-seed gourdcarcpiB0906
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G04360Cucumber (Chinese Long) v3cpicucB234
CSPI04G04360Watermelon (97103) v2cpiwmbB273
CSPI04G04360Watermelon (97103) v2cpiwmbB274
CSPI04G04360Wild cucumber (PI 183967)cpicpiB156
CSPI04G04360Cucurbita maxima (Rimu)cmacpiB716
CSPI04G04360Cucurbita moschata (Rifu)cmocpiB328
CSPI04G04360Cucurbita moschata (Rifu)cmocpiB604
CSPI04G04360Cucurbita moschata (Rifu)cmocpiB708
CSPI04G04360Cucumber (Chinese Long) v2cpicuB194
CSPI04G04360Watermelon (Charleston Gray)cpiwcgB298
CSPI04G04360Cucurbita pepo (Zucchini)cpecpiB398
CSPI04G04360Cucurbita pepo (Zucchini)cpecpiB731
CSPI04G04360Bottle gourd (USVL1VR-Ls)cpilsiB243
CSPI04G04360Cucumber (Gy14) v2cgybcpiB222
CSPI04G04360Silver-seed gourdcarcpiB0408
CSPI04G04360Silver-seed gourdcarcpiB0746