Cp4.1LG14g01930 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g01930
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger family protein
LocationCp4.1LG14 : 3339623 .. 3340196 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTAAGAGACCATCAAACCGCTCATTATTCCCTTAGACCCAGGAGAGATCACCCTCCTCCGAACCCAGATCCGGCGGCGCCACCACCTGCGCCGTCGTCTCCGGTTCGCTACCGTGAATGTTTGAGGAACTACGCCGTGAAGAGCGGCGGGCACGTGCTCGATGGGTGCGGAGAGTTCATGCCCAGTGGGGAAGATGGTACTGCTGATGGGTTCAAGTGCGCCGCCTGCGAATGTCACCGGAGTTTCCACCGGAGAGTAGTGGAGGTGGTGGATAACGGCCGGATTAAGGTCGTGAGTTACGGTATGTTTAATTATTATTATTATTATTATTATTATTATATATTGAGATCTAATAATGAAAAGGAAAATTATGTTTTATTTAACTATAATACAAGGTAAGAGGACAGAGCGGCGGAGTTTCGCTGGTCCGGTGATGATGGCGTTCGGCGGTTCGGCGGAAGGCCCGGCGGAGTCGTCAAGCGACGGCGGAGAAGCGTCGGGGAAGGCAAAGAAGCGGGTGAGGACGCAGTTCATCGTAGAAGAGAAGGGTAAAATGATGAGGCACTAG

mRNA sequence

ATGGAATTAAGAGACCATCAAACCGCTCATTATTCCCTTAGACCCAGGAGAGATCACCCTCCTCCGAACCCAGATCCGGCGGCGCCACCACCTGCGCCGTCGTCTCCGGTTCGCTACCGTGAATGTTTGAGGAACTACGCCGTGAAGAGCGGCGGGCACGTGCTCGATGGGTGCGGAGAGTTCATGCCCAGTGGGGAAGATGGTACTGCTGATGGGTTCAAGTGCGCCGCCTGCGAATGTCACCGGAGTTTCCACCGGAGAGTAGTGGAGGTGGTGGATAACGGCCGGATTAAGGTCGTGAGTTACGGTAAGAGGACAGAGCGGCGGAGTTTCGCTGGTCCGGTGATGATGGCGTTCGGCGGTTCGGCGGAAGGCCCGGCGGAGTCGTCAAGCGACGGCGGAGAAGCGTCGGGGAAGGCAAAGAAGCGGGTGAGGACGCAGTTCATCGTAGAAGAGAAGGGTAAAATGATGAGGCACTAG

Coding sequence (CDS)

ATGGAATTAAGAGACCATCAAACCGCTCATTATTCCCTTAGACCCAGGAGAGATCACCCTCCTCCGAACCCAGATCCGGCGGCGCCACCACCTGCGCCGTCGTCTCCGGTTCGCTACCGTGAATGTTTGAGGAACTACGCCGTGAAGAGCGGCGGGCACGTGCTCGATGGGTGCGGAGAGTTCATGCCCAGTGGGGAAGATGGTACTGCTGATGGGTTCAAGTGCGCCGCCTGCGAATGTCACCGGAGTTTCCACCGGAGAGTAGTGGAGGTGGTGGATAACGGCCGGATTAAGGTCGTGAGTTACGGTAAGAGGACAGAGCGGCGGAGTTTCGCTGGTCCGGTGATGATGGCGTTCGGCGGTTCGGCGGAAGGCCCGGCGGAGTCGTCAAGCGACGGCGGAGAAGCGTCGGGGAAGGCAAAGAAGCGGGTGAGGACGCAGTTCATCGTAGAAGAGAAGGGTAAAATGATGAGGCACTAG

Protein sequence

MELRDHQTAHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFIVEEKGKMMRH
Homology
[Close]
BLAST of Cp4.1LG14g01930 vs. Swiss-Prot
Match: ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-22
Identity = 57/128 (44.53%), Postives = 74/128 (57.81%), Query Frame = 1 

Query: 37  VRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDNGR 96
           +RYRECL+N+AV  GGH +DGC EFMPSGEDGT D  KCAAC CHR+FHR+  E +    
Sbjct: 47  IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRA 106

Query: 97  IKVVSYGKRTER-------RSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFI 156
            +V +Y  R  +            P       +A G  E +S+   +SG   KR RT+F 
Sbjct: 107 HRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSN-PSSSGGTTKRFRTKFT 166

Query: 157 VEEKGKMM 158
            E+K KM+
Sbjct: 167 AEQKEKML 173

[Close]
BLAST of Cp4.1LG14g01930 vs. Swiss-Prot
Match: ZHD6_ARATH (Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana GN=ZHD6 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.0e-22
Identity = 66/172 (38.37%), Postives = 88/172 (51.16%), Query Frame = 1 

Query: 16  RRDHPPPNPDP----------------AAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCG 75
           +R+   P+PDP                A P        RYREC +N+A  SGGHV+DGCG
Sbjct: 43  KRNGSDPDPDPDLDTNPISISHAPRSYARPQTTSPGKARYRECQKNHAASSGGHVVDGCG 102

Query: 76  EFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAF 135
           EFM SGE+GT +   CAAC+CHRSFHR+ ++ +         + +R        P+MM+F
Sbjct: 103 EFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFNSFGHSQRPLGSRHVSPIMMSF 162

Query: 136 GGSAEGPAESSSDG-----GEASG---------KAKKRVRTQFIVEEKGKMM 158
           GG     AESS++         SG         + KKR RT+F  E+K KMM
Sbjct: 163 GGGGGCAAESSTEDLNKFHQSFSGYGVDQFHHYQPKKRFRTKFNEEQKEKMM 214

[Close]
BLAST of Cp4.1LG14g01930 vs. Swiss-Prot
Match: ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 56/139 (40.29%), Postives = 77/139 (55.40%), Query Frame = 1 

Query: 35  SPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDN 94
           S  R+RECL+N AV  GGH +DGCGEFMP+G +GT D  KCAAC CHR+FHR+ +    +
Sbjct: 71  SRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHH 130

Query: 95  ------------GRIKVVSYGKRTERRSFAGPVMMAF----GGSAEGPAESSSDGGEASG 154
                       G  ++ +        S A P+ +A        +E P E+SS   EA G
Sbjct: 131 APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSS--AEAGG 190

Query: 155 KAKKRVRTQFIVEEKGKMM 158
             +KR RT+F  E+K +M+
Sbjct: 191 GIRKRHRTKFTAEQKERML 207

[Close]
BLAST of Cp4.1LG14g01930 vs. Swiss-Prot
Match: ZHD1_ORYSI (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica GN=ZHD1 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.8e-17
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 38  RYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVE 91
           RYRECL+N+AV  GGH +DGCGEFM +GE+GT D  +CAAC CHR+FHR+  E
Sbjct: 56  RYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESE 108

[Close]
BLAST of Cp4.1LG14g01930 vs. Swiss-Prot
Match: ZHD1_ORYSJ (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica GN=ZHD1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.8e-17
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 38  RYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVE 91
           RYRECL+N+AV  GGH +DGCGEFM +GE+GT D  +CAAC CHR+FHR+  E
Sbjct: 56  RYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESE 108

[Close]
BLAST of Cp4.1LG14g01930 vs. TrEMBL
Match: A0A0A0KWP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046670 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 102/177 (57.63%), Postives = 120/177 (67.80%), Query Frame = 1 

Query: 6   HQTAHYSLRPRRDHPPPNPDPAAP--PPAPSSP----VRYRECLRNYAVKSGGHVLDGCG 65
           H    YSLRPR D PPP P P  P   PAP+SP    +RY +CL+N+AVK+GGHVLDGCG
Sbjct: 15  HLPFQYSLRPRTDPPPPPPPPPPPNLDPAPASPTSTPLRYSQCLKNHAVKTGGHVLDGCG 74

Query: 66  EFMPSGEDGTADGFKCAACECHRSFHRRVVE---VVDNGRIKVV---------------S 125
           EFMPSGEDGT D FKCAACECHRSFHRRV+E   + +N R+ ++               +
Sbjct: 75  EFMPSGEDGTPDSFKCAACECHRSFHRRVLEEEDITNNTRLHILTSAPPQYNTQFSNGNN 134

Query: 126 YGKRTERRSFAGPVMMAFGGSAEGPAESSSDGG-EASGKAKKRVRTQFIVEEKGKMM 158
             K+   R+   P+MM FGGS E PAESSSDGG EASGK KKR RT+F  E+KGKMM
Sbjct: 135 NNKQYPGRTRVAPMMMTFGGSTEAPAESSSDGGAEASGKQKKRCRTKFSGEQKGKMM 191

[Close]
BLAST of Cp4.1LG14g01930 vs. TrEMBL
Match: A0A103Y5E2_CYNCS (Homeodomain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018859 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-23
Identity = 84/198 (42.42%), Postives = 101/198 (51.01%), Query Frame = 1 

Query: 14  RPRRDHPPPNPDPAA----PPPAPSSP---------------VRYRECLRNYAVKSGGHV 73
           RPRR+ P P PDPA     PP  P  P               VRYRECL+N+AV  G HV
Sbjct: 71  RPRRN-PNPGPDPARLVSQPPAQPLPPAPEPSTIARAAATVAVRYRECLKNHAVNMGTHV 130

Query: 74  LDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVE-------VVDNGRIKVVSYGKRTE 133
           LDGCGEFMPSGEDGT +  KCAACECHRSFHRR VE              ++ S   +  
Sbjct: 131 LDGCGEFMPSGEDGTPEALKCAACECHRSFHRREVEGESQSGYYTQQMASQIPSTHNQPP 190

Query: 134 RRSF-------------------AGPVMMAFGGSAEGPAESSSD--------GGE--ASG 157
           R +                      P+MMAFGG++  PAESSS+        GG    + 
Sbjct: 191 RAATVQLPPPQSPQQRHHRHHQPVQPIMMAFGGASGTPAESSSEDLNIFRTNGGAQLMAQ 250

[Close]
BLAST of Cp4.1LG14g01930 vs. TrEMBL
Match: A0A087HDM5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G347100 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-23
Identity = 71/152 (46.71%), Postives = 90/152 (59.21%), Query Frame = 1 

Query: 23  NPDPAAPPPAP-SSPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECH 82
           NP P AP P   +  VRYREC +N+A  SGGHV+DGCGEFM SGE+GTA+ F CAAC+CH
Sbjct: 48  NPIPIAPAPRSYARSVRYRECQKNHAASSGGHVVDGCGEFMSSGEEGTAESFLCAACDCH 107

Query: 83  RSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFGGSAEGPAESSSDG------GE 142
           RSFHR+ V+ +   +     + +R        P+MM+FGG   G AESS++         
Sbjct: 108 RSFHRKEVDGMFVVKFNSFGHSQRPLVSRHVSPMMMSFGGGG-GAAESSTEDLNKLHHQS 167

Query: 143 ASGK----------AKKRVRTQFIVEEKGKMM 158
            SGK           KKR RT+F  E+K KMM
Sbjct: 168 FSGKNGVDQFHQYHPKKRFRTKFNQEQKEKMM 198

[Close]
BLAST of Cp4.1LG14g01930 vs. TrEMBL
Match: V4M6J5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022806mg PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.8e-23
Identity = 74/174 (42.53%), Postives = 96/174 (55.17%), Query Frame = 1 

Query: 16  RRDHPPPNPDP--------AAPPP---------APSSPVRYRECLRNYAVKSGGHVLDGC 75
           +R+   P PDP         AP P         +PS  VRYREC RN+A  SGGHV+DGC
Sbjct: 46  KRNGSDPVPDPDLDTSPISVAPVPRSYVRPRATSPSKSVRYRECQRNHAASSGGHVVDGC 105

Query: 76  GEFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMA 135
           GEFM SGE+GTA+   CAAC+CHRSFHR+ ++ +   +   + + +R        P+MM+
Sbjct: 106 GEFMSSGEEGTAESLLCAACDCHRSFHRKEIDGMFVVKFNSLGHSQRPIVSRHVSPIMMS 165

Query: 136 FGGSAEG--PAESSSDG-----GEASGKA--------KKRVRTQFIVEEKGKMM 158
           FGG   G  PAESS++         SG          KKR RT+F  E+K KMM
Sbjct: 166 FGGGGGGRDPAESSTEDLNKLHQSFSGNGVDQFQYHPKKRFRTKFNQEQKEKMM 219

[Close]
BLAST of Cp4.1LG14g01930 vs. TrEMBL
Match: D7LBB2_ARALL (ATHB24 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900215 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-22
Identity = 72/166 (43.37%), Postives = 94/166 (56.63%), Query Frame = 1 

Query: 20  PPPNPD----PAAPPPAPSSPVR----------YRECLRNYAVKSGGHVLDGCGEFMPSG 79
           P P+PD    P +  PAP S VR          YREC +N+A  SGGHV+DGCGEFMPSG
Sbjct: 49  PDPDPDLDTNPISIAPAPRSYVRPQTTSPGKARYRECQKNHAASSGGHVVDGCGEFMPSG 108

Query: 80  EDGTADGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFGGSAEG 139
           E+GTA+  +CAAC+CHRSFHR+ ++ +         + +R        P+MM+FGG   G
Sbjct: 109 EEGTAESLRCAACDCHRSFHRKEIDGLFVVNFNSFGHSQRPLVSRHVSPIMMSFGGGG-G 168

Query: 140 PAESSSDG-----GEASG---------KAKKRVRTQFIVEEKGKMM 158
            AESS++         SG         + KKR RT+F  E+K KMM
Sbjct: 169 AAESSTEDLNKFHQSFSGNGVDQFHQYQPKKRFRTKFNEEQKEKMM 213

[Close]
BLAST of Cp4.1LG14g01930 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23
Identity = 57/128 (44.53%), Postives = 74/128 (57.81%), Query Frame = 1 

Query: 37  VRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDNGR 96
           +RYRECL+N+AV  GGH +DGC EFMPSGEDGT D  KCAAC CHR+FHR+  E +    
Sbjct: 47  IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRA 106

Query: 97  IKVVSYGKRTER-------RSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFI 156
            +V +Y  R  +            P       +A G  E +S+   +SG   KR RT+F 
Sbjct: 107 HRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSN-PSSSGGTTKRFRTKFT 166

Query: 157 VEEKGKMM 158
            E+K KM+
Sbjct: 167 AEQKEKML 173

[Close]
BLAST of Cp4.1LG14g01930 vs. TAIR10
Match: AT2G18350.1 (AT2G18350.1 homeobox protein 24)

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-23
Identity = 66/172 (38.37%), Postives = 88/172 (51.16%), Query Frame = 1 

Query: 16  RRDHPPPNPDP----------------AAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCG 75
           +R+   P+PDP                A P        RYREC +N+A  SGGHV+DGCG
Sbjct: 43  KRNGSDPDPDPDLDTNPISISHAPRSYARPQTTSPGKARYRECQKNHAASSGGHVVDGCG 102

Query: 76  EFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAF 135
           EFM SGE+GT +   CAAC+CHRSFHR+ ++ +         + +R        P+MM+F
Sbjct: 103 EFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFNSFGHSQRPLGSRHVSPIMMSF 162

Query: 136 GGSAEGPAESSSDG-----GEASG---------KAKKRVRTQFIVEEKGKMM 158
           GG     AESS++         SG         + KKR RT+F  E+K KMM
Sbjct: 163 GGGGGCAAESSTEDLNKFHQSFSGYGVDQFHHYQPKKRFRTKFNEEQKEKMM 214

[Close]
BLAST of Cp4.1LG14g01930 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-19
Identity = 56/139 (40.29%), Postives = 77/139 (55.40%), Query Frame = 1 

Query: 35  SPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVEVVDN 94
           S  R+RECL+N AV  GGH +DGCGEFMP+G +GT D  KCAAC CHR+FHR+ +    +
Sbjct: 71  SRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHH 130

Query: 95  ------------GRIKVVSYGKRTERRSFAGPVMMAF----GGSAEGPAESSSDGGEASG 154
                       G  ++ +        S A P+ +A        +E P E+SS   EA G
Sbjct: 131 APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSS--AEAGG 190

Query: 155 KAKKRVRTQFIVEEKGKMM 158
             +KR RT+F  E+K +M+
Sbjct: 191 GIRKRHRTKFTAEQKERML 207

[Close]
BLAST of Cp4.1LG14g01930 vs. TAIR10
Match: AT1G75240.1 (AT1G75240.1 homeobox protein 33)

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17
Identity = 66/203 (32.51%), Postives = 88/203 (43.35%), Query Frame = 1 

Query: 19  HPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAAC 78
           H   +P   +   A    VRYRECL+N+A   GG V DGCGEFMPSGE+GT +  +CAAC
Sbjct: 56  HQSKSPSSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAAC 115

Query: 79  ECHRSFHRRVVEVVDNGRIKVVS-----------YGKRTERR------------------ 138
           +CHR+FHR+ ++ V  G   ++S           YG    RR                  
Sbjct: 116 DCHRNFHRKEMDGV--GSSDLISHHRHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPN 175

Query: 139 -----------------SFAGPVMMAFGGSAEGPAESSSD-------GGEASGKA----- 158
                                P+ +A+GG   G   SS D        GE +G A     
Sbjct: 176 YQPIHHHKYGMSPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMA 235

[Close]
BLAST of Cp4.1LG14g01930 vs. TAIR10
Match: AT2G02540.1 (AT2G02540.1 homeobox protein 21)

HSP 1 Score: 84.0 bits (206), Expect = 9.4e-17
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 1 

Query: 37  VRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVE 91
           ++Y+ECL+N+A   GG+ +DGCGEFMPSGE+G+ +   C+ C CHR+FHRR  E
Sbjct: 85  IKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETE 138

[Close]
BLAST of Cp4.1LG14g01930 vs. NCBI nr
Match: gi|778690736|ref|XP_004146554.2| (PREDICTED: zinc-finger homeodomain protein 6-like [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 102/177 (57.63%), Postives = 120/177 (67.80%), Query Frame = 1 

Query: 6   HQTAHYSLRPRRDHPPPNPDPAAP--PPAPSSP----VRYRECLRNYAVKSGGHVLDGCG 65
           H    YSLRPR D PPP P P  P   PAP+SP    +RY +CL+N+AVK+GGHVLDGCG
Sbjct: 15  HLPFQYSLRPRTDPPPPPPPPPPPNLDPAPASPTSTPLRYSQCLKNHAVKTGGHVLDGCG 74

Query: 66  EFMPSGEDGTADGFKCAACECHRSFHRRVVE---VVDNGRIKVV---------------S 125
           EFMPSGEDGT D FKCAACECHRSFHRRV+E   + +N R+ ++               +
Sbjct: 75  EFMPSGEDGTPDSFKCAACECHRSFHRRVLEEEDITNNTRLHILTSAPPQYNTQFSNGNN 134

Query: 126 YGKRTERRSFAGPVMMAFGGSAEGPAESSSDGG-EASGKAKKRVRTQFIVEEKGKMM 158
             K+   R+   P+MM FGGS E PAESSSDGG EASGK KKR RT+F  E+KGKMM
Sbjct: 135 NNKQYPGRTRVAPMMMTFGGSTEAPAESSSDGGAEASGKQKKRCRTKFSGEQKGKMM 191

[Close]
BLAST of Cp4.1LG14g01930 vs. NCBI nr
Match: gi|659102354|ref|XP_008452084.1| (PREDICTED: zinc-finger homeodomain protein 6-like [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-41
Identity = 106/190 (55.79%), Postives = 124/190 (65.26%), Query Frame = 1 

Query: 1   MELRDHQTA---------HYSLR-PRRDHPPP---NPDPAAPPPAPSSPVRYRECLRNYA 60
           M+L++ QT           YSLR PR D PPP   NPDPA   P PS+PVRY +CL+N+A
Sbjct: 1   MDLKNQQTTSSPDHHLPFQYSLRRPRTDPPPPPPLNPDPAPASP-PSTPVRYSQCLKNHA 60

Query: 61  VKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVEVVD----NGRIKVVSYG 120
           VK+GGHVLDGCGEFMPSGEDGT D FKCAACECHRSFHRRV+E  D      R+ +++  
Sbjct: 61  VKTGGHVLDGCGEFMPSGEDGTPDSFKCAACECHRSFHRRVLEEEDVTNNTSRLHILTSA 120

Query: 121 ---------------KRTERRSFAGPVMMAFGGSAEGPAESSSDGGEASGK-AKKRVRTQ 158
                           +  RR+   PVMM FGGS E PAESSSDG EASG+  KKR RT+
Sbjct: 121 APPYTSQFNNGNNNNNQYPRRTRVAPVMMTFGGSTEAPAESSSDGAEASGRQQKKRSRTK 180

[Close]
BLAST of Cp4.1LG14g01930 vs. NCBI nr
Match: gi|976917382|gb|KVI02846.1| (Homeodomain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 116.7 bits (291), Expect = 3.7e-23
Identity = 84/198 (42.42%), Postives = 101/198 (51.01%), Query Frame = 1 

Query: 14  RPRRDHPPPNPDPAA----PPPAPSSP---------------VRYRECLRNYAVKSGGHV 73
           RPRR+ P P PDPA     PP  P  P               VRYRECL+N+AV  G HV
Sbjct: 71  RPRRN-PNPGPDPARLVSQPPAQPLPPAPEPSTIARAAATVAVRYRECLKNHAVNMGTHV 130

Query: 74  LDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVVE-------VVDNGRIKVVSYGKRTE 133
           LDGCGEFMPSGEDGT +  KCAACECHRSFHRR VE              ++ S   +  
Sbjct: 131 LDGCGEFMPSGEDGTPEALKCAACECHRSFHRREVEGESQSGYYTQQMASQIPSTHNQPP 190

Query: 134 RRSF-------------------AGPVMMAFGGSAEGPAESSSD--------GGE--ASG 157
           R +                      P+MMAFGG++  PAESSS+        GG    + 
Sbjct: 191 RAATVQLPPPQSPQQRHHRHHQPVQPIMMAFGGASGTPAESSSEDLNIFRTNGGAQLMAQ 250

[Close]
BLAST of Cp4.1LG14g01930 vs. NCBI nr
Match: gi|674247462|gb|KFK40227.1| (hypothetical protein AALP_AA3G347100 [Arabis alpina])

HSP 1 Score: 116.7 bits (291), Expect = 3.7e-23
Identity = 71/152 (46.71%), Postives = 90/152 (59.21%), Query Frame = 1 

Query: 23  NPDPAAPPPAP-SSPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECH 82
           NP P AP P   +  VRYREC +N+A  SGGHV+DGCGEFM SGE+GTA+ F CAAC+CH
Sbjct: 48  NPIPIAPAPRSYARSVRYRECQKNHAASSGGHVVDGCGEFMSSGEEGTAESFLCAACDCH 107

Query: 83  RSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFGGSAEGPAESSSDG------GE 142
           RSFHR+ V+ +   +     + +R        P+MM+FGG   G AESS++         
Sbjct: 108 RSFHRKEVDGMFVVKFNSFGHSQRPLVSRHVSPMMMSFGGGG-GAAESSTEDLNKLHHQS 167

Query: 143 ASGK----------AKKRVRTQFIVEEKGKMM 158
            SGK           KKR RT+F  E+K KMM
Sbjct: 168 FSGKNGVDQFHQYHPKKRFRTKFNQEQKEKMM 198

[Close]
BLAST of Cp4.1LG14g01930 vs. NCBI nr
Match: gi|658017823|ref|XP_008344270.1| (PREDICTED: zinc-finger homeodomain protein 6-like [Malus domestica])

HSP 1 Score: 116.7 bits (291), Expect = 3.7e-23
Identity = 89/219 (40.64%), Postives = 107/219 (48.86%), Query Frame = 1 

Query: 6   HQTAHYSLRPRRDHPPPNPD------------------------PAAPPPAP----SSPV 65
           HQT     R RRD P PNPD                        PAAPPP P    +S +
Sbjct: 58  HQTLD---RSRRD-PDPNPDLVPSPLVVTPSATTTIASGTNFKAPAAPPPPPPSAAASRI 117

Query: 66  RYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTADGFKCAACECHRSFHRRVV--EVVDNG 125
           RYRECL+NYA  SGGHVLDGCGEFMPSG++ T    KCAACECHR+FHR+ +  E V N 
Sbjct: 118 RYRECLKNYAANSGGHVLDGCGEFMPSGDEDTPGALKCAACECHRNFHRKEIDGEYVSN- 177

Query: 126 RIKVVSYGKRTERR---------------------SFAG----PVMMAFGGSAEGPAESS 157
              V+++ +   RR                     S AG    P+MM FGG     AESS
Sbjct: 178 NYYVINHQQHNSRRDSALTRLPVLASSPRGLPVYHSMAGGPSPPMMMTFGGGGGVVAESS 237

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g01930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZHD2_ARATH3.1e-2244.53Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD6_ARATH7.0e-2238.37Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana GN=ZHD6 PE=1 SV=1[more]
ZHD1_ARATH2.1e-1840.29Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD1_ORYSI6.8e-1766.04Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica GN=ZHD1 PE=3 SV=... [more]
ZHD1_ORYSJ6.8e-1766.04Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica GN=ZHD1 PE=2 S... [more]
BLAST of Cp4.1LG14g01930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWP2_CUCSA1.1e-4257.63Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046670 PE=4 SV=1[more]
A0A103Y5E2_CYNCS2.6e-2342.42Homeodomain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_01885... [more]
A0A087HDM5_ARAAL2.6e-2346.71Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G347100 PE=4 SV=1[more]
V4M6J5_EUTSA9.8e-2342.53Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022806mg PE=4 SV=1[more]
D7LBB2_ARALL2.2e-2243.37ATHB24 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900215 PE=4 SV=1[more]
BLAST of Cp4.1LG14g01930 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24660.11.8e-2344.53 homeobox protein 22[more]
AT2G18350.13.9e-2338.37 homeobox protein 24[more]
AT5G65410.11.2e-1940.29 homeobox protein 25[more]
AT1G75240.11.4e-1732.51 homeobox protein 33[more]
AT2G02540.19.4e-1755.56 homeobox protein 21[more]
BLAST of Cp4.1LG14g01930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690736|ref|XP_004146554.2|1.6e-4257.63PREDICTED: zinc-finger homeodomain protein 6-like [Cucumis sativus][more]
gi|659102354|ref|XP_008452084.1|2.3e-4155.79PREDICTED: zinc-finger homeodomain protein 6-like [Cucumis melo][more]
gi|976917382|gb|KVI02846.1|3.7e-2342.42Homeodomain-containing protein [Cynara cardunculus var. scolymus][more]
gi|674247462|gb|KFK40227.1|3.7e-2346.71hypothetical protein AALP_AA3G347100 [Arabis alpina][more]
gi|658017823|ref|XP_008344270.1|3.7e-2340.64PREDICTED: zinc-finger homeodomain protein 6-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006456ZF_HD_homeobox_Cys/His_dimer
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g01930.1Cp4.1LG14g01930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 37..90
score: 1.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 37..89
score: 2.2
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMsTIGR01566TIGR01566coord: 38..87
score: 7.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROFILEPS51523ZF_HD_DIMERcoord: 39..88
score: 24
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 21..157
score: 1.0
NoneNo IPR availablePANTHERPTHR31948:SF9ZINC-FINGER HOMEODOMAIN PROTEIN 6coord: 21..157
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g01930CmaCh16G006210Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g01930CmoCh16G006760Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g01930MELO3C016389.2Melon (DHL92) v3.6.1cpemedB238
Cp4.1LG14g01930CsaV3_4G005600Cucumber (Chinese Long) v3cpecucB0266
Cp4.1LG14g01930Bhi01G001829Wax gourdcpewgoB0297
Cp4.1LG14g01930CsGy4G005340Cucumber (Gy14) v2cgybcpeB487
Cp4.1LG14g01930Carg05742Silver-seed gourdcarcpeB1414
Cp4.1LG14g01930Carg00640Silver-seed gourdcarcpeB0558
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g01930Cp4.1LG10g00650Cucurbita pepo (Zucchini)cpecpeB064
Cp4.1LG14g01930Cp4.1LG19g09350Cucurbita pepo (Zucchini)cpecpeB239
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g01930Melon (DHL92) v3.6.1cpemedB248
Cp4.1LG14g01930Silver-seed gourdcarcpeB1301
Cp4.1LG14g01930Cucumber (Chinese Long) v3cpecucB0280
Cp4.1LG14g01930Wax gourdcpewgoB0289
Cp4.1LG14g01930Cucurbita pepo (Zucchini)cpecpeB065
Cp4.1LG14g01930Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG14g01930Cucurbita pepo (Zucchini)cpecpeB237
Cp4.1LG14g01930Cucumber (Gy14) v1cgycpeB0237
Cp4.1LG14g01930Cucurbita maxima (Rimu)cmacpeB714
Cp4.1LG14g01930Cucurbita moschata (Rifu)cmocpeB667
Cp4.1LG14g01930Wild cucumber (PI 183967)cpecpiB223
Cp4.1LG14g01930Wild cucumber (PI 183967)cpecpiB231
Cp4.1LG14g01930Cucumber (Chinese Long) v2cpecuB221
Cp4.1LG14g01930Bottle gourd (USVL1VR-Ls)cpelsiB166
Cp4.1LG14g01930Bottle gourd (USVL1VR-Ls)cpelsiB185
Cp4.1LG14g01930Watermelon (Charleston Gray)cpewcgB210
Cp4.1LG14g01930Watermelon (97103) v1cpewmB218
Cp4.1LG14g01930Melon (DHL92) v3.5.1cpemeB196
Cp4.1LG14g01930Melon (DHL92) v3.5.1cpemeB207
Cp4.1LG14g01930Cucumber (Gy14) v2cgybcpeB745