Cp4.1LG13g10130 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g10130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibosomal protein S14
LocationCp4.1LG13 : 7074122 .. 7074427 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAAGACAAGCGGAATATTCTTGACCATTATCGTCGACAGCTTGCTGCGAAGTTTGAGTTGAAACGGAAGCTTTACAAAGCCGTTTGCAACGATCCGAGTCTTCCCAACGATGTGCGTGAAGAGCATCGTTATAAGCTGTCGAAGCTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGGCCTAGGGGTGTCTACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGTGATCTGGCGTCCAAAGGTCTTGTAATGGGCGTCAAGAAATCTTCCTGGTAG

mRNA sequence

ATGACGGAAGACAAGCGGAATATTCTTGACCATTATCGTCGACAGCTTGCTGCGAAGTTTGAGTTGAAACGGAAGCTTTACAAAGCCGTTTGCAACGATCCGAGTCTTCCCAACGATGTGCGTGAAGAGCATCGTTATAAGCTGTCGAAGCTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGGCCTAGGGGTGTCTACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGTGATCTGGCGTCCAAAGGTCTTGTAATGGGCGTCAAGAAATCTTCCTGGTAG

Coding sequence (CDS)

ATGACGGAAGACAAGCGGAATATTCTTGACCATTATCGTCGACAGCTTGCTGCGAAGTTTGAGTTGAAACGGAAGCTTTACAAAGCCGTTTGCAACGATCCGAGTCTTCCCAACGATGTGCGTGAAGAGCATCGTTATAAGCTGTCGAAGCTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGGCCTAGGGGTGTCTACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGTGATCTGGCGTCCAAAGGTCTTGTAATGGGCGTCAAGAAATCTTCCTGGTAG

Protein sequence

MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW
Homology
[Close]
BLAST of Cp4.1LG13g10130 vs. Swiss-Prot
Match: RT14_OENBE (Ribosomal protein S14, mitochondrial OS=Oenothera berteroana GN=RPS14 PE=3 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 5.8e-38
Identity = 73/98 (74.49%), Postives = 87/98 (88.78%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LA K+EL+RKLYKA CNDP+LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 2   EKRNIRDHKRRLLATKYELRRKLYKAFCNDPALPSDMRDKHRYKLSKLPRNSSFARVRNR 61

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI TGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 62  CISTGRPRSVYEFFRISRIVFRGLASRGPLMGIKKSSW 99

[Close]
BLAST of Cp4.1LG13g10130 vs. Swiss-Prot
Match: RT14_VICFA (Ribosomal protein S14, mitochondrial OS=Vicia faba GN=RPS14 PE=3 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 5.4e-36
Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA C D  LP+D+R++ RYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKAFCKDSDLPSDMRDKLRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI TGRPR VY+LFR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 63  CISTGRPRSVYELFRISRIVFRSLASRGPLMGIKKSSW 100

[Close]
BLAST of Cp4.1LG13g10130 vs. Swiss-Prot
Match: RT14_BRANA (Ribosomal protein S14, mitochondrial OS=Brassica napus GN=RPS14 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.5e-35
Identity = 70/98 (71.43%), Postives = 83/98 (84.69%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +K+N  DH RR LAAKFEL+RKLYKA C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKQNSRDHKRRLLAAKFELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI TGRPR V + FR+ RIVFR LAS+G +MG+KKSSW
Sbjct: 63  CISTGRPRSVSEFFRIYRIVFRGLASRGSLMGIKKSSW 100

[Close]
BLAST of Cp4.1LG13g10130 vs. Swiss-Prot
Match: RT14_MARPO (Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha GN=RPS14 PE=3 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-31
Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 1 

Query: 8   ILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFT 67
           I DH RR L AK+ELKR  YKA+C D +LPN +R E+ +KLSKLPRNSS TR+RNRCIFT
Sbjct: 6   IRDHKRRLLVAKYELKRMHYKAICQDRNLPNKIRYEYFFKLSKLPRNSSKTRVRNRCIFT 65

Query: 68  GRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           GRPR VY+LFR+SRIVFR+LASKG ++G+ KS W
Sbjct: 66  GRPRSVYKLFRISRIVFRELASKGSLIGINKSCW 99

[Close]
BLAST of Cp4.1LG13g10130 vs. Swiss-Prot
Match: RT14_PROWI (Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii GN=RPS14 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.1e-20
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 1 

Query: 10  DHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGR 69
           D  RR+L  K+E KR LYKA+ +D +L  D+R     KL+KLPRNSS  R++NRCI TGR
Sbjct: 8   DLKRRKLYKKYESKRLLYKALISDCNLNQDLRFILTQKLNKLPRNSSQVRVKNRCILTGR 67

Query: 70  PRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
              VY+  R+SRI FRDLA++GL+ G  KSSW
Sbjct: 68  GHSVYKFCRISRIKFRDLANQGLIQGCVKSSW 99

[Close]
BLAST of Cp4.1LG13g10130 vs. TrEMBL
Match: A0A0A0LSR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386130 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.4e-44
Identity = 88/101 (87.13%), Postives = 96/101 (95.05%), Query Frame = 1 

Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFELKR L+KA+CNDPSLP D+REEHR KLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGLVMGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]
BLAST of Cp4.1LG13g10130 vs. TrEMBL
Match: V9VFW3_AMBTC (Ribosomal protein S14 OS=Amborella trichopoda GN=rps14 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-36
Identity = 74/98 (75.51%), Postives = 87/98 (88.78%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CIFTGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 63  CIFTGRPRSVYEFFRISRIVFRGLASRGSLMGIKKSSW 100

[Close]
BLAST of Cp4.1LG13g10130 vs. TrEMBL
Match: A0A0M5L7R7_9MAGN (Ribosomal protein S14 OS=Heuchera parviflora var. saurensis GN=rps14 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-36
Identity = 74/98 (75.51%), Postives = 87/98 (88.78%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 23  EKRNIRDHKRRLLAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 82

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CIFTGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 83  CIFTGRPRSVYEFFRISRIVFRGLASRGPLMGIKKSSW 120

[Close]
BLAST of Cp4.1LG13g10130 vs. TrEMBL
Match: Q0QG47_JUNEF (Ribosomal protein S14 OS=Juncus effusus PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.2e-36
Identity = 73/98 (74.49%), Postives = 88/98 (89.80%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA+C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKALCQDPDLPSDMRDKHRYKLSKLPRNSSFLRVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI+TGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 63  CIYTGRPRSVYEFFRISRIVFRGLASRGSLMGIKKSSW 100

[Close]
BLAST of Cp4.1LG13g10130 vs. TrEMBL
Match: A0A0J8CR24_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051900 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-36
Identity = 73/98 (74.49%), Postives = 89/98 (90.82%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           DKRNILD+ RR+LAAK+EL+RKLYKA+C DP LP  ++E+HRYKLSKLPRNS+F RLRNR
Sbjct: 47  DKRNILDYKRRKLAAKYELRRKLYKALCRDPELPPSMKEKHRYKLSKLPRNSAFNRLRNR 106

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CIFTGRPR VY+ FR+SRIVFR+LAS+G ++GVKK+SW
Sbjct: 107 CIFTGRPRAVYEKFRMSRIVFRELASQGQLLGVKKASW 144

[Close]
BLAST of Cp4.1LG13g10130 vs. TAIR10
Match: AT2G34520.1 (AT2G34520.1 mitochondrial ribosomal protein S14)

HSP 1 Score: 146.7 bits (369), Expect = 7.5e-36
Identity = 69/97 (71.13%), Postives = 83/97 (85.57%), Query Frame = 1 

Query: 5   KRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRC 64
           KRN  DH RR LAA+FEL+RKLYKA C DP LP+++R+++RYKLSKLPRNS+F R+RNRC
Sbjct: 68  KRNSADHRRRLLAARFELRRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRNRC 127

Query: 65  IFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           +FTGR R V +LFRVSRIVFR LASKG +MG+ KSSW
Sbjct: 128 VFTGRSRSVTELFRVSRIVFRGLASKGALMGITKSSW 164

[Close]
BLAST of Cp4.1LG13g10130 vs. TAIR10
Match: ATCG00330.1 (ATCG00330.1 chloroplast ribosomal protein S14)

HSP 1 Score: 53.9 bits (128), Expect = 6.6e-08
Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 1 

Query: 13  RRQLAAKFEL-KRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPR 72
           R++L  K+ L +R   K +   PSL    + +   KL   PRNS+ TRL  RC  TGRPR
Sbjct: 13  RQKLEKKYHLIRRSSKKEISKIPSLSE--KWKIHGKLQSPPRNSAPTRLHRRCFSTGRPR 72

Query: 73  GVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
             Y+ F +S  + R++    L+ G  +SSW
Sbjct: 73  ANYRDFGLSGHILREMVQACLLPGATRSSW 100

[Close]
BLAST of Cp4.1LG13g10130 vs. NCBI nr
Match: gi|659113442|ref|XP_008456576.1| (PREDICTED: ribosomal protein S14, mitochondrial [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-44
Identity = 89/101 (88.12%), Postives = 97/101 (96.04%), Query Frame = 1 

Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFE+KR L+KA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGLVMGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]
BLAST of Cp4.1LG13g10130 vs. NCBI nr
Match: gi|778672795|ref|XP_011649873.1| (PREDICTED: ribosomal protein S14, mitochondrial [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 88/101 (87.13%), Postives = 96/101 (95.05%), Query Frame = 1 

Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFELKR L+KA+CNDPSLP D+REEHR KLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGLVMGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]
BLAST of Cp4.1LG13g10130 vs. NCBI nr
Match: gi|557954302|gb|AHA47122.1| (ribosomal protein S14 (mitochondrion) [Amborella trichopoda])

HSP 1 Score: 160.2 bits (404), Expect = 1.9e-36
Identity = 74/98 (75.51%), Postives = 87/98 (88.78%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CIFTGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 63  CIFTGRPRSVYEFFRISRIVFRGLASRGSLMGIKKSSW 100

[Close]
BLAST of Cp4.1LG13g10130 vs. NCBI nr
Match: gi|927682216|gb|ALE29228.1| (ribosomal protein S14 (mitochondrion) [Heuchera parviflora var. saurensis])

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-36
Identity = 74/98 (75.51%), Postives = 87/98 (88.78%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 23  EKRNIRDHKRRLLAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 82

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CIFTGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 83  CIFTGRPRSVYEFFRISRIVFRGLASRGPLMGIKKSSW 120

[Close]
BLAST of Cp4.1LG13g10130 vs. NCBI nr
Match: gi|88193119|gb|ABD42934.1| (ribosomal protein S14 (mitochondrion) [Juncus effusus])

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-36
Identity = 73/98 (74.49%), Postives = 88/98 (89.80%), Query Frame = 1 

Query: 4   DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA+C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKALCQDPDLPSDMRDKHRYKLSKLPRNSSFLRVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI+TGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 63  CIYTGRPRSVYEFFRISRIVFRGLASRGSLMGIKKSSW 100

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g10130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RT14_OENBE5.8e-3874.49Ribosomal protein S14, mitochondrial OS=Oenothera berteroana GN=RPS14 PE=3 SV=2[more]
RT14_VICFA5.4e-3673.47Ribosomal protein S14, mitochondrial OS=Vicia faba GN=RPS14 PE=3 SV=2[more]
RT14_BRANA3.5e-3571.43Ribosomal protein S14, mitochondrial OS=Brassica napus GN=RPS14 PE=3 SV=1[more]
RT14_MARPO1.4e-3169.15Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha GN=RPS14 PE=3 SV=2[more]
RT14_PROWI7.1e-2055.43Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii GN=RPS14 PE=3 SV=... [more]
BLAST of Cp4.1LG13g10130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSR8_CUCSA8.4e-4487.13Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386130 PE=4 SV=1[more]
V9VFW3_AMBTC1.3e-3675.51Ribosomal protein S14 OS=Amborella trichopoda GN=rps14 PE=2 SV=1[more]
A0A0M5L7R7_9MAGN1.7e-3675.51Ribosomal protein S14 OS=Heuchera parviflora var. saurensis GN=rps14 PE=4 SV=1[more]
Q0QG47_JUNEF2.2e-3674.49Ribosomal protein S14 OS=Juncus effusus PE=4 SV=1[more]
A0A0J8CR24_BETVU8.4e-3674.49Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051900 PE=4 S... [more]
BLAST of Cp4.1LG13g10130 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34520.17.5e-3671.13 mitochondrial ribosomal protein S14[more]
ATCG00330.16.6e-0837.78ATCG00330.1 chloroplast ribosomal protein S14[more]
BLAST of Cp4.1LG13g10130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113442|ref|XP_008456576.1|1.9e-4488.12PREDICTED: ribosomal protein S14, mitochondrial [Cucumis melo][more]
gi|778672795|ref|XP_011649873.1|1.2e-4387.13PREDICTED: ribosomal protein S14, mitochondrial [Cucumis sativus][more]
gi|557954302|gb|AHA47122.1|1.9e-3675.51ribosomal protein S14 (mitochondrion) [Amborella trichopoda][more]
gi|927682216|gb|ALE29228.1|2.4e-3675.51ribosomal protein S14 (mitochondrion) [Heuchera parviflora var. saurensis][more]
gi|88193119|gb|ABD42934.1|3.2e-3674.49ribosomal protein S14 (mitochondrion) [Juncus effusus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR018271Ribosomal_S14_CS
IPR001209Ribosomal_S14
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0009853 photorespiration
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g10130.1Cp4.1LG13g10130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PANTHERPTHR1983630S RIBOSOMAL PROTEIN S14coord: 1..101
score: 2.5
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 47..100
score: 1.6
IPR018271Ribosomal protein S14, conserved sitePROSITEPS00527RIBOSOMAL_S14coord: 63..85
scor
NoneNo IPR availableGENE3DG3DSA:4.10.830.10coord: 43..101
score: 2.7
NoneNo IPR availablePANTHERPTHR19836:SF22SUBFAMILY NOT NAMEDcoord: 1..101
score: 2.5
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 8..101
score: 2.07

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g10130Cucsa.163290Cucumber (Gy14) v1cgycpeB0432
Cp4.1LG13g10130CmaCh15G004850Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g10130CmoCh15G004930Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g10130CmoCh04G026530Cucurbita moschata (Rifu)cmocpeB664
Cp4.1LG13g10130Cla013713Watermelon (97103) v1cpewmB171
Cp4.1LG13g10130Csa2G386130Cucumber (Chinese Long) v2cpecuB164
Cp4.1LG13g10130MELO3C019879Melon (DHL92) v3.5.1cpemeB169
Cp4.1LG13g10130ClCG08G008070Watermelon (Charleston Gray)cpewcgB181
Cp4.1LG13g10130CSPI02G24360Wild cucumber (PI 183967)cpecpiB166
Cp4.1LG13g10130Lsi08G006640Bottle gourd (USVL1VR-Ls)cpelsiB161
Cp4.1LG13g10130MELO3C019879.2Melon (DHL92) v3.6.1cpemedB204
Cp4.1LG13g10130CsaV3_2G032930Cucumber (Chinese Long) v3cpecucB0193
Cp4.1LG13g10130Bhi04G001027Wax gourdcpewgoB0253
Cp4.1LG13g10130CsGy2G024160Cucumber (Gy14) v2cgybcpeB182
Cp4.1LG13g10130Carg04602Silver-seed gourdcarcpeB0960
Cp4.1LG13g10130Carg02428Silver-seed gourdcarcpeB0366
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g10130Cp4.1LG01g24810Cucurbita pepo (Zucchini)cpecpeB207
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g10130Wax gourdcpewgoB0249
Cp4.1LG13g10130Wax gourdcpewgoB0259
Cp4.1LG13g10130Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG13g10130Cucurbita pepo (Zucchini)cpecpeB208
Cp4.1LG13g10130Cucurbita pepo (Zucchini)cpecpeB214
Cp4.1LG13g10130Cucumber (Gy14) v1cgycpeB0805
Cp4.1LG13g10130Cucurbita maxima (Rimu)cmacpeB705
Cp4.1LG13g10130Cucurbita maxima (Rimu)cmacpeB711
Cp4.1LG13g10130Cucurbita maxima (Rimu)cmacpeB712
Cp4.1LG13g10130Cucurbita moschata (Rifu)cmocpeB657
Cp4.1LG13g10130Cucurbita moschata (Rifu)cmocpeB665
Cp4.1LG13g10130Wild cucumber (PI 183967)cpecpiB184
Cp4.1LG13g10130Cucumber (Chinese Long) v2cpecuB182
Cp4.1LG13g10130Bottle gourd (USVL1VR-Ls)cpelsiB151
Cp4.1LG13g10130Bottle gourd (USVL1VR-Ls)cpelsiB159
Cp4.1LG13g10130Watermelon (Charleston Gray)cpewcgB183
Cp4.1LG13g10130Watermelon (97103) v1cpewmB173
Cp4.1LG13g10130Watermelon (97103) v1cpewmB181
Cp4.1LG13g10130Melon (DHL92) v3.5.1cpemeB161
Cp4.1LG13g10130Melon (DHL92) v3.5.1cpemeB166
Cp4.1LG13g10130Cucumber (Gy14) v2cgybcpeB606
Cp4.1LG13g10130Melon (DHL92) v3.6.1cpemedB190
Cp4.1LG13g10130Melon (DHL92) v3.6.1cpemedB198
Cp4.1LG13g10130Silver-seed gourdcarcpeB0962
Cp4.1LG13g10130Silver-seed gourdcarcpeB1174
Cp4.1LG13g10130Cucumber (Chinese Long) v3cpecucB0219