Cp4.1LG12g11880 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g11880
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description39S ribosomal protein L46, mitochondrial
LocationCp4.1LG12 : 8377111 .. 8380747 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACGTAAGCTTAAAAATTAATTTAACTATTAAATCATATTTTGATATTTTCTAAAAGCCAAAGATTAAAGGTACAATTTTGAAATCGAGAGAGAAAAATATATTTTACCAAAATGCCCCTCCCGAACGACATTTCCGAAAGGAGCCCAATGGTTAAACTCAGCCCAAAGCCTATAGTATACGCAACCTCCGGCGGCCCAGTTAGAAACAGAACAATAGGAGGAGATTCATCAAAGCGCAGCCCTCGCCGTCGACGGTCACTCTCCCATTCTCAGGTGAACACTTTGCCCTTTGTTAGTTTTCTGTGTGAAAAGCATTCCAATGGCAGCTTATGAATGGATGTACAATATTGGTTCAACCTGTTCTTAGAGCTTCGATGCAAGTTCTAGTATTATCTCTCTAAAAAAATTTCTTGTATGGTGTGTGAATTGTTACTTCTTTTTCTCTAATCGGTTGTGTGTGATTCTCTGAAGTTCAGAATGCAGAGATCGTTTAGTTTAGCCAGTCAGCTCGCTAAGAGGCGAGGTTTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCTGTCGTGATTCCGAAGATTGACCCCGTGGTGTATGCATTTCAGGAGTTCAAGTAGGTCTTTCGTCTTGTATTTCTTATTACGGTCTCTGTAAACTTAGAAATATTGAAAAATGGGGAGAAATGACGGAAACAGGTGCTGTATCTTGACTTGATTTCCCATCAGAATAGTGAATAACCAGGAATTGGAATTCGAACTACGTGGTTAATGTATTATAGCTATTATATGGTCGCAACTTAAATCAAGCAACATCGGTATGGTGTACTCTCTGTGAAAACAGTTTGTCTGATATATCTGCTCGATCGTGATCAGGTTTAGGTGGCAACAACAATATCGGCGCCGATATCCTGATGAACTTTTAGATAAAGCTAATGCCAGGTATGTGATCTATCATTTCGTCTGGCTGTGTCAAGTATAGGATTTTGGATTATGAATTGTTTCAACTGTTCTTTCCTTTTGAACTCTTCTAATTCTTCTTAGGTTTCCATTCCATTGAAATAAGTTTTAACTGATTCTGATGCTCTATATTCCTGAATAGTGTTTTCATGTAAATGCTGCAATAAAATTAGGTCCGCTAACTGGTTCAACCTGATTTGTGAAACTGAAGTATTAACTCTAAGTACTTTTGGAACGGAGTCAAAAGCATCTAAAGAAAGTTACCAGTTATTGGTAATGTTAAACTTTATGACTTCACTGGAGCCTGCTATGTTGAAGCTTTTTGCTGGCAAATATTAGCGTTTCCTTTAGTAGTGAGTCGAGTTTCTTTGACAAGAGAAAAACATATGCCATAGCTTTTAGGTAGTCAAGTTATTGTACATTTGAATCATTTGCTTGGACTATTTAGGTGGAAAAAGACCACCATTGTGTTTTCCTTATCTTCCTGAGTTATCTTAGTTCATTTGGTTGTAAACTGGATGACTGCGGTTACTGGAATCACCAATATATAACTATCGCTAGCGCAATTTCGTGTGCCCATAGCATAATATTTATTTTGACAAGGCAGCCTTAGCTCTTAGTGCCATCAATGTCATTTAGCTAATTTAATGGAGCTTATTGCGCAAAGACTGGATAAATTGCAAATATATGTTTTTTTCTTTCTTTCGGCAATTGTATGACTTGAGCTGCTCTGGTAACAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTATGCAGTCTTTCTTCATAATTTTGTTTAGAATTGGTTGATTGAAGGTTTCCTTAGCGATGCGACCATCACTATTTAGGAAAAACAGATATGCAATCTATGAGCTCTTGTTCTTGTTCATGCTGAATTATCTTCATTGTTTTGACTTACAAGGCTATCTTGTGTTTCTTCCTTTACTCTTCTAGATCATCAGTTTCCTCTTGCTTCTGTTAACTAACTACCATAAGTTGTGAGGTTATTCTTTTATAGTTGTGATTATGTAATGCTCTTGATTCATGTACAACACTTTTATATCCAAGTGTGGCTTCGGTGTCATGCATATCAAGAGCATCCTGCTACTGTTAGGTGCTTTCAACTCATTTACTTTAGTGCTCTTACATCTATAATACCACGGTTCTACTCGATTCATGATGACCAATGCACCTTGTTTTATTCCTGGGGAAACCTCTTTCATTTGATTCATAAGAAAATTTTCGGACATCATGGTATATCAAATAAATGCTAAATTATCATCACTTGGTTACTAGATCAGGCCATCGGCGTATTTCTTACTCTAGAACTGGAGTTTTAGATGGTGGCTATAAAATACAGCGTCTCTTTTTTTTCTCATTGTTGTTTTAGACAGTCTATCTGATCCAAGTCATTAATTTTCCAGATTCTAAGCTCAAAAGAGAGGTTTAAATTCTGCTTACTTGAATTGTCCCCTTTCCTTTTAGGTCACTGCAGAGAGCACTTGACAGAAGACTCTATCTTCTCCTCTATGGTGCCTCTATTGGGGCACCTGATAAGAAGCCTGTCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAAGTAAGAATTGGCTGCCAACCCTCTTCAGTTCTCTATTTCAACAATTAAACCCTTCTAACTTTCAAGTTCTGCAGTGTGCAGAGTCTGCCTTAGAGTCCGTTCTTGGAGGTCTTTCTCATACATATTTTGTCGGCAATGCTCCAATGGCTCATATGGTTGTACCACCTACAGAAACTGCTCAAGTTCCATCTTTGAAGGTATTCTTCTATTCAAACTTTTACATCATATAAGAGATTAAAGGCTTCACGCTTTGACACTTAGAATCGATTAAATACCATGTGATCTCTGTACTCTAGATTATATTCTATTTTAGTCCTTGTACTTTAGATTGTCCAAATTTAGGCTTTATATTTAAGATTTATTGATTGTCCAATTGTCCAAGAACTAAATTTGGACACTTAAAATACATGAACTAAAATAGAATAAAACTCAAAGTAGTGAACCAAAATGATATTTACCTTTGGAGTCTAGGCTCGAACATAGTTTAGTACAATGAGGTCATTTACTCCTTTGGTTAAAGGCAATCTCTCCTATTTGCCAGCGATTCTTTTTCAAGTCTCAAGTGATCGCAACCAATAAATTCAACATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCTAGTAGACTGACCACATAAGCCTCACATAGACCGTTTTCAATCAACAAATTGATGGTCAGTGTGTAAGTGACTTAGAGGATTGAGTTATAAAATGTTAAATTAATGGTAAGGCCGGAGGCTTTGTTTGTTGCTCTGATGTAAAATGGCCGATGAGGATACCAATTTAGGATCCGCACTTTGGCAATTTCCTCTCAGCTGTTTCTTTGATTACTAGATAGTGTGGATTAATGGTTCAGACCCCTTATTTTGATTTCTCGAACCAACTAGAGTCATCTTTCATATCATCTTGAAATTTTGAATATATCAACTT

mRNA sequence

ATGCCACAGAGAAAAATATATTTTACCAAAATGCCCCTCCCGAACGACATTTCCGAAAGGAGCCCAATGGTTAAACTCAGCCCAAAGCCTATAGTATACGCAACCTCCGGCGGCCCAGTTAGAAACAGAACAATAGGAGGAGATTCATCAAAGCGCAGCCCTCGCCGTCGACGGTCACTCTCCCATTCTCAGTTCAGAATGCAGAGATCGTTTAGTTTAGCCAGTCAGCTCGCTAAGAGGCGAGGTTTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCTGTCGTGATTCCGAAGATTGACCCCGTGGTGTATGCATTTCAGGAGTTCAAGTTTAGGTGGCAACAACAATATCGGCGCCGATATCCTGATGAACTTTTAGATAAAGCTAATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTCACTGCAGAGAGCACTTGACAGAAGACTCTATCTTCTCCTCTATGGTGCCTCTATTGGGGCACCTGATAAGAAGCCTGTCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTAGAGTCCGTTCTTGGAGGTCTTTCTCATACATATTTTGTCGGCAATGCTCCAATGGCTCATATGGTTGTACCACCTACAGAAACTGCTCAAGTTCCATCTTTGAAGCGATTCTTTTTCAAGTCTCAAGTGATCGCAACCAATAAATTCAACATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCTAGTAGACTGACCACATAAGCCTCACATAGACCGTTTTCAATCAACAAATTGATGGTCAGTGTGTAAGTGACTTAGAGGATTGAGTTATAAAATGTTAAATTAATGGTAAGGCCGGAGGCTTTGTTTGTTGCTCTGATGTAAAATGGCCGATGAGGATACCAATTTAGGATCCGCACTTTGGCAATTTCCTCTCAGCTGTTTCTTTGATTACTAGATAGTGTGGATTAATGGTTCAGACCCCTTATTTTGATTTCTCGAACCAACTAGAGTCATCTTTCATATCATCTTGAAATTTTGAATATATCAACTT

Coding sequence (CDS)

ATGCCACAGAGAAAAATATATTTTACCAAAATGCCCCTCCCGAACGACATTTCCGAAAGGAGCCCAATGGTTAAACTCAGCCCAAAGCCTATAGTATACGCAACCTCCGGCGGCCCAGTTAGAAACAGAACAATAGGAGGAGATTCATCAAAGCGCAGCCCTCGCCGTCGACGGTCACTCTCCCATTCTCAGTTCAGAATGCAGAGATCGTTTAGTTTAGCCAGTCAGCTCGCTAAGAGGCGAGGTTTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCTGTCGTGATTCCGAAGATTGACCCCGTGGTGTATGCATTTCAGGAGTTCAAGTTTAGGTGGCAACAACAATATCGGCGCCGATATCCTGATGAACTTTTAGATAAAGCTAATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTCACTGCAGAGAGCACTTGACAGAAGACTCTATCTTCTCCTCTATGGTGCCTCTATTGGGGCACCTGATAAGAAGCCTGTCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTAGAGTCCGTTCTTGGAGGTCTTTCTCATACATATTTTGTCGGCAATGCTCCAATGGCTCATATGGTTGTACCACCTACAGAAACTGCTCAAGTTCCATCTTTGAAGCGATTCTTTTTCAAGTCTCAAGTGATCGCAACCAATAAATTCAACATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGA

Protein sequence

MPQRKIYFTKMPLPNDISERSPMVKLSPKPIVYATSGGPVRNRTIGGDSSKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Homology
[Close]
BLAST of Cp4.1LG12g11880 vs. Swiss-Prot
Match: RM46_MOUSE (39S ribosomal protein L46, mitochondrial OS=Mus musculus GN=Mrpl46 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14
Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 1 

Query: 146 IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETL 205
           + + P  R TEADK NDR SL R LDR L +LL    +G  D   VW  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-VLLVREKLGDQD---VWMLPQVEWQPGETL 186

Query: 206 RKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKF 265
           R  AE  L ++        F+GNAP  H      +  Q  S   +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFV 246

Query: 266 NIGKCEDFVWVTKDELMEY 282
             GK    VW +K+EL +Y
Sbjct: 247 QAGKKSRHVWASKEELGDY 261

[Close]
BLAST of Cp4.1LG12g11880 vs. Swiss-Prot
Match: RM46_HUMAN (39S ribosomal protein L46, mitochondrial OS=Homo sapiens GN=MRPL46 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-14
Identity = 52/132 (39.39%), Postives = 67/132 (50.76%), Query Frame = 1 

Query: 153 RITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETLRKCAESA 212
           RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQAEWQPGETLRGTAERT 195

Query: 213 LESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKFNIGKCED 272
           L ++        F+GNAP  H      +  +  S    K FFFK+ ++  +    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 273 FVWVTKDELMEY 282
            VWVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]
BLAST of Cp4.1LG12g11880 vs. Swiss-Prot
Match: RM46_PONAB (39S ribosomal protein L46, mitochondrial OS=Pongo abelii GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-14
Identity = 52/132 (39.39%), Postives = 67/132 (50.76%), Query Frame = 1 

Query: 153 RITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETLRKCAESA 212
           RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQTEWQPGETLRGTAERT 195

Query: 213 LESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKFNIGKCED 272
           L ++        F+GNAP  H      +  +  S    K FFFK+ ++  +    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 273 FVWVTKDELMEY 282
            VWVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]
BLAST of Cp4.1LG12g11880 vs. Swiss-Prot
Match: RM46_RAT (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus GN=Mrpl46 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.9e-14
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 1 

Query: 146 IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETL 205
           + + P  R TEADK NDR SL R LDR L +LL    +G  D   +W  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-ILLVREKLGDQD---LWMLPQVEWQPGETL 186

Query: 206 RKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKF 265
           R  AE  L ++        F+GNAP  H      +  +  S   +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFV 246

Query: 266 NIGKCEDFVWVTKDELMEY 282
             GK    VW +K+EL +Y
Sbjct: 247 QTGKKGRHVWASKEELGDY 261

[Close]
BLAST of Cp4.1LG12g11880 vs. Swiss-Prot
Match: RM17_YEAST (54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL17 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 6.4e-13
Identity = 55/159 (34.59%), Postives = 78/159 (49.06%), Query Frame = 1 

Query: 139 RGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKA 198
           + K D     +P  RITEAD++ND KSL+R L R LYLL+        DK   W FP   
Sbjct: 131 QSKDDVNRPVIPNDRITEADRSNDMKSLERQLSRTLYLLV-------KDKSGTWKFPNFD 190

Query: 199 YETE-ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVI 258
              E + L   AE+ L+ + G   +T+ V   P+  +      TA+      F  KS ++
Sbjct: 191 LSDESKPLHVHAENELKLLSGDQIYTWSVSATPIGVLQDERNRTAE------FIVKSHIL 250

Query: 259 ATNKFNI-----GKCEDFVWVTKDELMEYFPDQAEFFKK 292
           A  KF++        EDF W+TK E+ EY P   ++F K
Sbjct: 251 A-GKFDLVASKNDAFEDFAWLTKGEISEYVP--KDYFNK 273

[Close]
BLAST of Cp4.1LG12g11880 vs. TrEMBL
Match: A0A0A0KAL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G391280 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 212/277 (76.53%), Postives = 237/277 (85.56%), Query Frame = 1 

Query: 23  MVKLSPKPIVYATSGGPVRNRTIGGDSSKRSPRRRRSLS---HSQF-RMQRSFSLASQLA 82
           MV +S KPI Y TS   +R        + R   +  +L+   H+   RMQRS + A QL 
Sbjct: 1   MVMISSKPIEYPTSAAHLRTLR-----TTREGYQSATLAVDGHTVILRMQRSLNFAGQLV 60

Query: 83  KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKANA 142
           KRRGFSTNSEKIVA+VLFERLPVVIPKIDPV+YAF +F+FRWQQQYRR+YPDE L+KA+ 
Sbjct: 61  KRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQYRRKYPDEFLNKADG 120

Query: 143 RGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKA 202
           RGKGDYQIDYVPAPRITEADKTNDRKSL+RALDRRLYLLLYG SIGAPD+KP+WHFPEKA
Sbjct: 121 RGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKA 180

Query: 203 YETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIA 262
           YETEETLRKCAESAL+SVLG LS TYFVGNAPM HMVVPPTETA VP+LKRFFFKSQV+A
Sbjct: 181 YETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAPVPTLKRFFFKSQVVA 240

Query: 263 TNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
            +KF+IGKCEDFVWVTKDEL+E+FPDQAEFFKKMIIS
Sbjct: 241 ADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 272

[Close]
BLAST of Cp4.1LG12g11880 vs. TrEMBL
Match: B9RDY6_RICCO (DECOY, putative OS=Ricinus communis GN=RCOM_1616710 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-101
Identity = 181/223 (81.17%), Postives = 195/223 (87.44%), Query Frame = 1 

Query: 73  LASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEL 132
           LA  +   RGF T  EKIVASVLFERLPVV+PKIDPVVYAFQEF FRWQQQYRRRYPDE 
Sbjct: 62  LARPVVTTRGFCTKPEKIVASVLFERLPVVVPKIDPVVYAFQEFSFRWQQQYRRRYPDEF 121

Query: 133 LDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVW 192
           LDKANARG+GDYQIDYVPAPRITEADKTND KSLQRALDRRLYL+LYG + G+P KKPVW
Sbjct: 122 LDKANARGQGDYQIDYVPAPRITEADKTNDTKSLQRALDRRLYLVLYGNAYGSPSKKPVW 181

Query: 193 HFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFF 252
           HFP+K YE E+TLRKCAESAL+SVLG LSHTYFVGNAPM HMV+ PT+TA     K+FFF
Sbjct: 182 HFPQKLYEAEDTLRKCAESALQSVLGDLSHTYFVGNAPMGHMVIQPTDTAPDAGYKQFFF 241

Query: 253 KSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           KSQVIATNKF IGKCEDF WVTKDEL+EYFP+QAEF  KMIIS
Sbjct: 242 KSQVIATNKFRIGKCEDFSWVTKDELLEYFPEQAEFLNKMIIS 284

[Close]
BLAST of Cp4.1LG12g11880 vs. TrEMBL
Match: V4U2D8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021940mg PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-101
Identity = 185/231 (80.09%), Postives = 201/231 (87.01%), Query Frame = 1 

Query: 67  MQRSF-SLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYR 126
           M+RS  SL   L   RGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEF FRW+QQYR
Sbjct: 1   MRRSLTSLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYR 60

Query: 127 RRYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGA 186
           RRYPDE LDK+N+RGKGDYQ++YVPAPRITE DKTNDRKSLQRALDRRLYL+LYG + GA
Sbjct: 61  RRYPDEFLDKSNSRGKGDYQMEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGA 120

Query: 187 PDKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTE-TAQV 246
           P  KP+WHFPEK YE+EE+LRKCAE AL+SVLG LSHTYFVGNAPM HMV+ P E    V
Sbjct: 121 PGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDV 180

Query: 247 PSLKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           PS K+FFFKSQVIA+NKF IGKCEDFVWVTKDELMEYFP+ AEF  KMIIS
Sbjct: 181 PSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEYFPESAEFLNKMIIS 231

[Close]
BLAST of Cp4.1LG12g11880 vs. TrEMBL
Match: V4TD07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021940mg PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-101
Identity = 185/232 (79.74%), Postives = 202/232 (87.07%), Query Frame = 1 

Query: 66  RMQRSF-SLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQY 125
           +M+RS  SL   L   RGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEF FRW+QQY
Sbjct: 10  KMRRSLTSLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQY 69

Query: 126 RRRYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIG 185
           RRRYPDE LDK+N+RGKGDYQ++YVPAPRITE DKTNDRKSLQRALDRRLYL+LYG + G
Sbjct: 70  RRRYPDEFLDKSNSRGKGDYQMEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFG 129

Query: 186 APDKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTE-TAQ 245
           AP  KP+WHFPEK YE+EE+LRKCAE AL+SVLG LSHTYFVGNAPM HMV+ P E    
Sbjct: 130 APGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPD 189

Query: 246 VPSLKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           VPS K+FFFKSQVIA+NKF IGKCEDFVWVTKDELMEYFP+ AEF  KMIIS
Sbjct: 190 VPSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEYFPESAEFLNKMIIS 241

[Close]
BLAST of Cp4.1LG12g11880 vs. TrEMBL
Match: A0A067H5Y8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026251mg PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-101
Identity = 185/231 (80.09%), Postives = 201/231 (87.01%), Query Frame = 1 

Query: 67  MQRSF-SLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYR 126
           M+RS  SL   L   RGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEF FRW+QQYR
Sbjct: 1   MRRSLTSLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYR 60

Query: 127 RRYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGA 186
           RRYPDE LDK+N+RGKGDYQ++YVPAPRITE DKTNDRKSLQRALDRRLYL+LYG + GA
Sbjct: 61  RRYPDEFLDKSNSRGKGDYQMEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGA 120

Query: 187 PDKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTE-TAQV 246
           P  KP+WHFPEK YE+EE+LRKCAE AL+SVLG LSHTYFVGNAPM HMV+ P E    V
Sbjct: 121 PGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDV 180

Query: 247 PSLKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           PS K+FFFKSQVIA+NKF IGKCEDFVWVTKDELMEYFP+ AEF  KMIIS
Sbjct: 181 PSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEYFPESAEFLNKMIIS 231

[Close]
BLAST of Cp4.1LG12g11880 vs. TAIR10
Match: AT1G14620.1 (AT1G14620.1 decoy)

HSP 1 Score: 337.4 bits (864), Expect = 8.7e-93
Identity = 161/220 (73.18%), Postives = 184/220 (83.64%), Query Frame = 1 

Query: 77  LAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKA 136
           L  RRGF T+S+KIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RRRYPDE LD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 137 NARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPE 196
             R KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYLL++G   GA   KPVWHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 197 KAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPT-ETAQVPSLKRFFFKSQ 256
           K Y++E TLRKCAESAL+SV+G L+HTYFVGNAPMAHM + PT E   +PS KRFFFK  
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFFKCS 193

Query: 257 VIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           V+A +K++I  CEDFVWVTKDEL+E+FP+QAEFF KMIIS
Sbjct: 194 VVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS 233

[Close]
BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: gi|659101069|ref|XP_008451408.1| (PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 7.4e-118
Identity = 207/232 (89.22%), Postives = 223/232 (96.12%), Query Frame = 1 

Query: 64  QFRMQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQ 123
           Q+RMQRS S ASQL KRRGFSTNSEKIVA+VLFERLP+VIPKIDPVVYAF EF+FRWQQQ
Sbjct: 4   QYRMQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQ 63

Query: 124 YRRRYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASI 183
           YRR+YPDE LDKA+ARGKGDYQIDYVPAPRITEADKTNDRKSL+RALDRRLYLLLYG SI
Sbjct: 64  YRRKYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSI 123

Query: 184 GAPDKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQ 243
           GAPD+KP+WHFPEK YETEETLRKCAESAL+SVLG LSHTYFVGNAPM HMVVPPTETAQ
Sbjct: 124 GAPDEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQ 183

Query: 244 VPSLKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           VP+LKRFFFKSQV+AT+KF+IGKCEDFVWVTKDEL+E+FPDQAEFFKKMIIS
Sbjct: 184 VPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 235

[Close]
BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: gi|659101071|ref|XP_008451409.1| (PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 1.4e-116
Identity = 205/229 (89.52%), Postives = 220/229 (96.07%), Query Frame = 1 

Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRS S ASQL KRRGFSTNSEKIVA+VLFERLP+VIPKIDPVVYAF EF+FRWQQQYRR
Sbjct: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           +YPDE LDKA+ARGKGDYQIDYVPAPRITEADKTNDRKSL+RALDRRLYLLLYG SIGAP
Sbjct: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           D+KP+WHFPEK YETEETLRKCAESAL+SVLG LSHTYFVGNAPM HMVVPPTETAQVP+
Sbjct: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           LKRFFFKSQV+AT+KF+IGKCEDFVWVTKDEL+E+FPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229

[Close]
BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: gi|778727817|ref|XP_011659323.1| (PREDICTED: 39S ribosomal protein L46, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 8.5e-114
Identity = 200/232 (86.21%), Postives = 219/232 (94.40%), Query Frame = 1 

Query: 64  QFRMQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQ 123
           Q+RMQRS + A QL KRRGFSTNSEKIVA+VLFERLPVVIPKIDPV+YAF +F+FRWQQQ
Sbjct: 4   QYRMQRSLNFAGQLVKRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQ 63

Query: 124 YRRRYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASI 183
           YRR+YPDE L+KA+ RGKGDYQIDYVPAPRITEADKTNDRKSL+RALDRRLYLLLYG SI
Sbjct: 64  YRRKYPDEFLNKADGRGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSI 123

Query: 184 GAPDKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQ 243
           GAPD+KP+WHFPEKAYETEETLRKCAESAL+SVLG LS TYFVGNAPM HMVVPPTETA 
Sbjct: 124 GAPDEKPIWHFPEKAYETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAP 183

Query: 244 VPSLKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           VP+LKRFFFKSQV+A +KF+IGKCEDFVWVTKDEL+E+FPDQAEFFKKMIIS
Sbjct: 184 VPTLKRFFFKSQVVAADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 235

[Close]
BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: gi|700189618|gb|KGN44851.1| (hypothetical protein Csa_7G391280 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.9e-113
Identity = 212/277 (76.53%), Postives = 237/277 (85.56%), Query Frame = 1 

Query: 23  MVKLSPKPIVYATSGGPVRNRTIGGDSSKRSPRRRRSLS---HSQF-RMQRSFSLASQLA 82
           MV +S KPI Y TS   +R        + R   +  +L+   H+   RMQRS + A QL 
Sbjct: 1   MVMISSKPIEYPTSAAHLRTLR-----TTREGYQSATLAVDGHTVILRMQRSLNFAGQLV 60

Query: 83  KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKANA 142
           KRRGFSTNSEKIVA+VLFERLPVVIPKIDPV+YAF +F+FRWQQQYRR+YPDE L+KA+ 
Sbjct: 61  KRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQYRRKYPDEFLNKADG 120

Query: 143 RGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKA 202
           RGKGDYQIDYVPAPRITEADKTNDRKSL+RALDRRLYLLLYG SIGAPD+KP+WHFPEKA
Sbjct: 121 RGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKA 180

Query: 203 YETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIA 262
           YETEETLRKCAESAL+SVLG LS TYFVGNAPM HMVVPPTETA VP+LKRFFFKSQV+A
Sbjct: 181 YETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAPVPTLKRFFFKSQVVA 240

Query: 263 TNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
            +KF+IGKCEDFVWVTKDEL+E+FPDQAEFFKKMIIS
Sbjct: 241 ADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 272

[Close]
BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: gi|449462292|ref|XP_004148875.1| (PREDICTED: 39S ribosomal protein L46, mitochondrial isoform X3 [Cucumis sativus])

HSP 1 Score: 414.5 bits (1064), Expect = 1.6e-112
Identity = 198/229 (86.46%), Postives = 216/229 (94.32%), Query Frame = 1 

Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRS + A QL KRRGFSTNSEKIVA+VLFERLPVVIPKIDPV+YAF +F+FRWQQQYRR
Sbjct: 1   MQRSLNFAGQLVKRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQYRR 60

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           +YPDE L+KA+ RGKGDYQIDYVPAPRITEADKTNDRKSL+RALDRRLYLLLYG SIGAP
Sbjct: 61  KYPDEFLNKADGRGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           D+KP+WHFPEKAYETEETLRKCAESAL+SVLG LS TYFVGNAPM HMVVPPTETA VP+
Sbjct: 121 DEKPIWHFPEKAYETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAPVPT 180

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           LKRFFFKSQV+A +KF+IGKCEDFVWVTKDEL+E+FPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVVAADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g11880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RM46_MOUSE1.2e-1437.4139S ribosomal protein L46, mitochondrial OS=Mus musculus GN=Mrpl46 PE=1 SV=1[more]
RM46_HUMAN4.5e-1439.3939S ribosomal protein L46, mitochondrial OS=Homo sapiens GN=MRPL46 PE=1 SV=1[more]
RM46_PONAB4.5e-1439.3939S ribosomal protein L46, mitochondrial OS=Pongo abelii GN=MRPL46 PE=2 SV=1[more]
RM46_RAT9.9e-1435.9739S ribosomal protein L46, mitochondrial OS=Rattus norvegicus GN=Mrpl46 PE=2 SV=... [more]
RM17_YEAST6.4e-1334.5954S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATC... [more]
BLAST of Cp4.1LG12g11880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAL5_CUCSA1.3e-11376.53Uncharacterized protein OS=Cucumis sativus GN=Csa_7G391280 PE=4 SV=1[more]
B9RDY6_RICCO2.0e-10181.17DECOY, putative OS=Ricinus communis GN=RCOM_1616710 PE=4 SV=1[more]
V4U2D8_9ROSI2.0e-10180.09Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021940mg PE=4 SV=1[more]
V4TD07_9ROSI2.0e-10179.74Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021940mg PE=4 SV=1[more]
A0A067H5Y8_CITSI2.0e-10180.09Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026251mg PE=4 SV=1[more]
BLAST of Cp4.1LG12g11880 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14620.18.7e-9373.18 decoy[more]
BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101069|ref|XP_008451408.1|7.4e-11889.22PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X1 [Cucumis melo][more]
gi|659101071|ref|XP_008451409.1|1.4e-11689.52PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo][more]
gi|778727817|ref|XP_011659323.1|8.5e-11486.21PREDICTED: 39S ribosomal protein L46, mitochondrial isoform X2 [Cucumis sativus][more]
gi|700189618|gb|KGN44851.1|1.9e-11376.53hypothetical protein Csa_7G391280 [Cucumis sativus][more]
gi|449462292|ref|XP_004148875.1|1.6e-11286.46PREDICTED: 39S ribosomal protein L46, mitochondrial isoform X3 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034968 histone lysine methylation
biological_process GO:0009909 regulation of flower development
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g11880.1Cp4.1LG12g11880.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 24..295
score: 1.5
NoneNo IPR availablePANTHERPTHR13124:SF1239S RIBOSOMAL PROTEIN L46, MITOCHONDRIALcoord: 24..295
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g11880Cucsa.084830Cucumber (Gy14) v1cgycpeB0150
Cp4.1LG12g11880CmaCh17G011490Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g11880CmoCh17G011240Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g11880Cla014727Watermelon (97103) v1cpewmB131
Cp4.1LG12g11880Csa7G391280Cucumber (Chinese Long) v2cpecuB158
Cp4.1LG12g11880MELO3C015876Melon (DHL92) v3.5.1cpemeB124
Cp4.1LG12g11880ClCG09G006700Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g11880CSPI07G16690Wild cucumber (PI 183967)cpecpiB160
Cp4.1LG12g11880Lsi02G023280Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g11880MELO3C015876.2Melon (DHL92) v3.6.1cpemedB151
Cp4.1LG12g11880CsaV3_7G028460Cucumber (Chinese Long) v3cpecucB0183
Cp4.1LG12g11880Bhi09G000825Wax gourdcpewgoB0203
Cp4.1LG12g11880CsGy7G015170Cucumber (Gy14) v2cgybcpeB901
Cp4.1LG12g11880Carg07224Silver-seed gourdcarcpeB0158
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g11880Wax gourdcpewgoB0197
Cp4.1LG12g11880Wax gourdcpewgoB0205
Cp4.1LG12g11880Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g11880Cucumber (Gy14) v1cgycpeB0151
Cp4.1LG12g11880Cucurbita maxima (Rimu)cmacpeB372
Cp4.1LG12g11880Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g11880Cucurbita moschata (Rifu)cmocpeB336
Cp4.1LG12g11880Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g11880Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g11880Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g11880Bottle gourd (USVL1VR-Ls)cpelsiB119
Cp4.1LG12g11880Watermelon (97103) v1cpewmB132
Cp4.1LG12g11880Watermelon (97103) v1cpewmB150
Cp4.1LG12g11880Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g11880Melon (DHL92) v3.6.1cpemedB154
Cp4.1LG12g11880Silver-seed gourdcarcpeB1198
Cp4.1LG12g11880Silver-seed gourdcarcpeB1199
Cp4.1LG12g11880Cucumber (Chinese Long) v3cpecucB0186