Cp4.1LG12g10490 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g10490
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	smr (Small MutS Related) domain-containing protein
Location	Cp4.1LG12 : 9432070 .. 9437043 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGAAAAAAGCGCTCGCAAATCTAGAGAGAATCCTGTCGTAGATGGAATAAAGAAATTGAGAGAAAAGCATTCAATCTCCTTCATTCAATTTTTTACTTCATCCCTTTGAAGGAATTCTTAATCGAAGTCAAAGATCAGAGTATGTGGGGTAGGGTTGAAGTTGAACTGTGCCCTTTGAAGATTTCCCGATTTCTTTGTTTCCTTTTCCGCTCTGGAATTCGATCTATGCAGCAAAATTTTCACCCAAATTTCTCTACTTTCTATCTCCGAATTGAATTTCCGTTTCCAAAATCGATTACGAAGGGGCACAAACGGCGGAGTTGGGGATTTGAGATAGTGAGAAGACTCGGTTAGCGGATTTGGGAGTCGAATCTTTTCAACTTCTTGTGTCTCCTGCTCCTTCAGGTTTGAACCCTAATTTTCTCGTTGAAGCTGGAAGGTATTCTTATGGATTTTCTGGTATTTGTTTCTTCTGTTGCTTCCTTTTGGTTCGGTTACTTGTTTAATCTATGTTGATTTCCTGATACGATTGAAGTATTTTTCTTCTGATCGTTGACTTCGTTTTTCCTCCTTTTTTGTTGGGGATTCTTGGATTGAGCGTGTCAGAATGTTAGACCTTTTTATCTTTACTGAAATAAGCTATTTTCGTCGTAATCTTGCTTTGGTTTGTGTCTCTTTTTCGAAGTCTACTGATGATTTGGCCATCGATAGTGGCTTTATATTAATGTTTGATTCCGGTCGTGCTAGAATGGGTCTGTTGAAATTTTCTATATTCCAGGTATGAACAGCTCTGTTTCTTCCAGTCGTGCTACCTCTTCGAGTTGCAGTTTTATTGGATTGTCGGAACTACAAGACATATTCATAGTAGGAGGGGTTTGAGTTAGACCCGGAGTGTGAAATTTTAATTTACTGGTGCTCAACTCCGTATGCTTTATTTTCAGTTCCTTGCATTGGAAGATGTCGTGGGGGAGGGGTAAATCGCCTGGATGGGCAGCGGTTAACCTTAAGCAACAGAATAGTGGCCTTCAAGATGAAATTGACCCGGACCCATTCCCACCAATGTCTACCGCTCTTTCCTTTCTGCCACCCCGTGAAAACGTACACAGAGTTAATGGTCGTTCAGGGAGATCTTTCTCATCGACACCCCTTCCTTCTGCCGATTCTTTAATGTCACCAAAAAATTTTGGTGCAAAAAAGACCATACCTGGTAATTCTAGCATTCGAAGTGGCAAGAAGTTGGTTGAAGAATCCACTGATGTTTTAGCCTTCTGGAAGCTTAAAGAGCTTCATTCTTGGGCTGATATCAGTTTGATTGTGGATATAATGGAAGCTGTAAATAATAACTTCAACGAGGCGTCTAAGTTATTAAAAACAATGGTTTCTAGTGACAATTTTGAGATCAATAATGAGATGAGCACCTTAGGACTGCATTCCTCTAATGATGTATCATTGGTGAGGGGTAAATCTCCTGGCTGGGAAGAATATAACCTTAAGCAACAAAATAGAGGCCTTCAAGATAGAATTGATCCGAAACCATTCCCACCGATGCCAAGTGCCCTTTCCTCTTTGCCACCCCGTGAAAACTTGCACGGAGTTACTGGCCGTCCAGGGAGATCCTCCTCATCTTCACCTCTTCCTTCTGCTGATTCTCTAACTTCGCCAGAAAATTACAGTGCAAAGAAAATACTTGGTGATTCTAGCATTCAAAATGGAAGGAAGGTGGTTGAAGAAACCACTGACGTTTTAGCCTTTTGGAAGCTTAAGGAGCTTCATACTTGGGCTGATTTTAGCTTGATTGTGGATATAATGGAAGCTGTAGATAATAACTTCAATGAGGCATCTACTTATTTAAACAAAATGGTTTCTAGTGACAATGTTGAGATCTGTAACGAGATGAGCACCTTAGGACTGCATTCTGCTGATGGACTATCGTGCTATGGGAAGAATGATGTAACTATATCATTAGGAAGAACTGTTAATAATCCCATCCCTAGTTCCACACTAAAGGATGTGCAAGACATGCATCAAAATATTAATGATAAATTGTTTGAAAATAATTATCATGAAAGAAATTTCTTTCACAATGTTGGAAATCCAAAAATAGCTCTTTATTGCTCAAAGTCTGCTCCTATTGAGCCCGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATAGCAATGATGAGGTAAATAAGTCTTCTGTCTACTTTATTATCGGGTTGTTTTTCTACTTCAATTTAATTTTGTTTCCCTTAATAAATATATTTTTTAAAATTTCTATAACAAAAACTTCTTTTTTTTCCTGCGTTTATCATTGTGATGCACCACTAGGTTTCTCGGGCTCTTTGTATTTATTATATATTTTTACCGTGTGTGAGAAGAACGTTTTAAAGAATTTATATGTATGGGGGATCTCTTCTATAGGTTGTACCTTGAGTTATGAGTAGACAACAGTCTGTTTGTATGAATAAGCTAATTTATGTTGATAGCTCAAGCTTTGGGGATTAGTAGAAAGTCGACGTGTTAAGAGAGAGTTATTGAATCCAAGTCCATGGTAAATTTTTTTTTTAACTCAAATTGACACTGTAATCATACTCAAAAGAAATGTTAAAAAATAATTGTTGGACAATTATTCTTGACCTAGGCTCTCTAGTATTGTGGCTTTGGTTTTATGTTGTAGTGTAAAATATATGGTTCTTGGGAGAAGGTTCAAGTACTCAATGGTATAGGAGTTGATGTCTTGCTTAACATGATCCGATGTTATTTGTAATTTTCTTTAATCAATAGGTCTGCATCTCAACATTCAAGGGCAGCCACTAATGCCTATCTTCGGAAGGATCATGCTTCAGCCAAGTATCATTCATCAAGGGCTCAAGAACAATGGCTAGCTGCAAAAATGTTAAATGCTAAGGCAGCCAATGAAATTTTACAAACAAGGAATAGTGAAAATGGGCTCTGGAAGTTGGACCTACATGGGCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGATCACTTGCTGAAAATCGAAACTCGGAATGCCTCCAATCGGTCGTTGTCGCCAAAGAAAGCTGAAAGGAAGGGTTTCCATCGTGTTTCATCCCTTGAGTATCTTAGTTGTATGGGCGTAAAGTTGGACAAAGAATTACAATCACCATTACCTAGGCATAGGCCGACATCATTGGAAGTCATAACAGGTAAATTTGTACCTGTTGCTGTTTAACTCAACATTTGTGTTTTCTTAAAGATTGGTTGTCTATATTTTTTGTTTTGACGTTTTTGTTCATTCTTTTCACATTTATTTTTCTTGAGAATGGAATCATTGTATGACAATGTAACTGATAACTTTAGAGGTTGACTACGCTTGTGTTGGCTTTAGCCTTTATCAATTCCAGAGATAGATTGGCATTTTCTACATTATTCAGTTCATCAAGATTTGTTCTTGGATTGATACTCCACTATTGATAGGCTGTATGAATTGTGAGGAAAAGTTTAGGAGTCCAGAAATTTCCGAGAGAGGGGAATGAAGTATTCCTTATAAGGGTGTAAAACCTCTCCCTAGTGGACACGTTTTAAAACCTTGAAGGGAAAGCCTAAAGAGGACAATACGTGCTAGCGGTGGGCTTGGGCGGTTACAAATGGTATCAGAGCCAGACACCAGACTGTATGTCAGTGAGGATGTTGGGCTCCCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCATTCCTCGTAAGGGTGTGGAAACCTCTCCTTAAAACCTTGAGGGGAATCTCGGAAGGGAAAGTACAAAGAGGACTATGAGCTTGTTTCTTTGCATTTATTGCATGCAAGAGTCATTCAAGTAACCTTAATCAAAGTATCTTGTGAAGTGATTCGAATCACGAGTTTAGAAACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGTAAGTCATTCTAAAACTTTCCCCTAGGTTATTCTTTATCATTTTTGGAGTTTTTAGATAATTTAGATCTAAAGATCTTGTTCTTCAGCAAGGTTGTTAGATCAAATATCAAGAGTTTCATAGTGCATCTTACCCATGCGTGTACTTGGAGGAAGGTTCTTGGGGAAGTAATGAGCAATTAGTTAGCTGGGGATGGCCGGGTGGATACACGTTTCGTGACTGTGGGTCCCATTTTGTAATGAAGGACAAAATAGAAATCTGTTTAGCTGAGGCCGGGAGGCTATATATATTAGATATAACAATGAGTTTCATCATAGGCTGATTTGACTGAAGGGAAAGATTTAAATGTCGGTGACGCTAGCATATTTTTTTTTTGTAAAATAACGAATTCTCACGTGCACTACTGATTCAAACATTGACGATTGTACTCATGATGTTTTGTTCGTTCCCAAAGGAATAGGTAAACATAGCAGGGGGGAGGCTGCTCTACCAAAGGCCGTGACAAGTTTTCTTAGTGAAAATGGGTGAGTCTATCGTTTCTTTCCATTTTGACTTGAACCCAAAAGAAGGGTAAAAATGTTTATAGATTCATTCTACTTCAACCACACTTGATAATTTGCAGGTACCGTTTTGAACAGTTGAGGCCTGGAACGATCAGCGTTCGCCCAAAGTTTCGTAGGTAAATGAGTACCCCTTATTAGTAATAGCTTCAAAGTTATTCAGTCAGAACGTAGATTAGAGTCGTTGGAGGTTGGGTAAGTGAAACGTGTAAAATGACTGAAAACGTTCGTTATTTAGAAGGAGCTCGGTAGGATTGATTGTTAACCACATTACTGCATTGTTATTTTGTTGTCTTTCCTGGAAAAGATGGCACCTAGGAAGAAGAGGTTAGAAGAACTCTGGAATCCTGGGATTGTATTCTATTATGATTCATTATGGCGATTGCACTAGTTGAGTCTACTTCTCTAATCTATTGAAAATATAATAAGCTGATTTGCTAATGACTTCATCAAT

mRNA sequence

GGGGAAAAAAGCGCTCGCAAATCTAGAGAGAATCCTGTCGTAGATGGAATAAAGAAATTGAGAGAAAAGCATTCAATCTCCTTCATTCAATTTTTTACTTCATCCCTTTGAAGGAATTCTTAATCGAAGTCAAAGATCAGAGTATGTGGGGTAGGGTTGAAGTTGAACTGTGCCCTTTGAAGATTTCCCGATTTCTTTGTTTCCTTTTCCGCTCTGGAATTCGATCTATGCAGCAAAATTTTCACCCAAATTTCTCTACTTTCTATCTCCGAATTGAATTTCCGTTTCCAAAATCGATTACGAAGGGGCACAAACGGCGGAGTTGGGGATTTGAGATAGTGAGAAGACTCGGTTAGCGGATTTGGGAGTCGAATCTTTTCAACTTCTTGTGTCTCCTGCTCCTTCAGGTATGAACAGCTCTGTTTCTTCCAGTCGTGCTACCTCTTCGAGTTGCAGTTTTATTGGATTGTCGGAACTACAAGACATATTCATAGTAGGAGGGGTTTGAGTTAGACCCGGAGTGTGAAATTTTAATTTACTGGTGCTCAACTCCGTATGCTTTATTTTCAGTTCCTTGCATTGGAAGATGTCGTGGGGGAGGGGTAAATCGCCTGGATGGGCAGCGGTTAACCTTAAGCAACAGAATAGTGGCCTTCAAGATGAAATTGACCCGGACCCATTCCCACCAATGTCTACCGCTCTTTCCTTTCTGCCACCCCGTGAAAACGTACACAGAGTTAATGGTCGTTCAGGGAGATCTTTCTCATCGACACCCCTTCCTTCTGCCGATTCTTTAATGTCACCAAAAAATTTTGGTGCAAAAAAGACCATACCTGGTAATTCTAGCATTCGAAGTGGCAAGAAGTTGGTTGAAGAATCCACTGATGTTTTAGCCTTCTGGAAGCTTAAAGAGCTTCATTCTTGGGCTGATATCAGTTTGATTGTGGATATAATGGAAGCTGTAAATAATAACTTCAACGAGGCGTCTAAGTTATTAAAAACAATGGTTTCTAGTGACAATTTTGAGATCAATAATGAGATGAGCACCTTAGGACTGCATTCCTCTAATGATGTATCATTGGTGAGGGGTAAATCTCCTGGCTGGGAAGAATATAACCTTAAGCAACAAAATAGAGGCCTTCAAGATAGAATTGATCCGAAACCATTCCCACCGATGCCAAGTGCCCTTTCCTCTTTGCCACCCCGTGAAAACTTGCACGGAGTTACTGGCCGTCCAGGGAGATCCTCCTCATCTTCACCTCTTCCTTCTGCTGATTCTCTAACTTCGCCAGAAAATTACAGTGCAAAGAAAATACTTGGTGATTCTAGCATTCAAAATGGAAGGAAGGTGGTTGAAGAAACCACTGACGTTTTAGCCTTTTGGAAGCTTAAGGAGCTTCATACTTGGGCTGATTTTAGCTTGATTGTGGATATAATGGAAGCTGTAGATAATAACTTCAATGAGGCATCTACTTATTTAAACAAAATGGTTTCTAGTGACAATGTTGAGATCTGTAACGAGATGAGCACCTTAGGACTGCATTCTGCTGATGGACTATCGTGCTATGGGAAGAATGATGTAACTATATCATTAGGAAGAACTGTTAATAATCCCATCCCTAGTTCCACACTAAAGGATGTGCAAGACATGCATCAAAATATTAATGATAAATTGTTTGAAAATAATTATCATGAAAGAAATTTCTTTCACAATGTTGGAAATCCAAAAATAGCTCTTTATTGCTCAAAGTCTGCTCCTATTGAGCCCGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATAGCAATGATGAGGTCTGCATCTCAACATTCAAGGGCAGCCACTAATGCCTATCTTCGGAAGGATCATGCTTCAGCCAAGTATCATTCATCAAGGGCTCAAGAACAATGGCTAGCTGCAAAAATGTTAAATGCTAAGGCAGCCAATGAAATTTTACAAACAAGGAATAGTGAAAATGGGCTCTGGAAGTTGGACCTACATGGGCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGATCACTTGCTGAAAATCGAAACTCGGAATGCCTCCAATCGGTCGTTGTCGCCAAAGAAAGCTGAAAGGAAGGGTTTCCATCGTGTTTCATCCCTTGAGTATCTTAGTTGTATGGGCGTAAAGTTGGACAAAGAATTACAATCACCATTACCTAGGCATAGGCCGACATCATTGGAAGTCATAACAGGAATAGGTAAACATAGCAGGGGGGAGGCTGCTCTACCAAAGGCCGTGACAAGTTTTCTTAGTGAAAATGGGTACCGTTTTGAACAGTTGAGGCCTGGAACGATCAGCGTTCGCCCAAAGTTTCGTAGGTAAATGAGTACCCCTTATTAGTAATAGCTTCAAAGTTATTCAGTCAGAACGTAGATTAGAGTCGTTGGAGGTTGGGTAAGTGAAACGTGTAAAATGACTGAAAACGTTCGTTATTTAGAAGGAGCTCGGTAGGATTGATTGTTAACCACATTACTGCATTGTTATTTTGTTGTCTTTCCTGGAAAAGATGGCACCTAGGAAGAAGAGGTTAGAAGAACTCTGGAATCCTGGGATTGTATTCTATTATGATTCATTATGGCGATTGCACTAGTTGAGTCTACTTCTCTAATCTATTGAAAATATAATAAGCTGATTTGCTAATGACTTCATCAAT

Coding sequence (CDS)

ATGTCGTGGGGGAGGGGTAAATCGCCTGGATGGGCAGCGGTTAACCTTAAGCAACAGAATAGTGGCCTTCAAGATGAAATTGACCCGGACCCATTCCCACCAATGTCTACCGCTCTTTCCTTTCTGCCACCCCGTGAAAACGTACACAGAGTTAATGGTCGTTCAGGGAGATCTTTCTCATCGACACCCCTTCCTTCTGCCGATTCTTTAATGTCACCAAAAAATTTTGGTGCAAAAAAGACCATACCTGGTAATTCTAGCATTCGAAGTGGCAAGAAGTTGGTTGAAGAATCCACTGATGTTTTAGCCTTCTGGAAGCTTAAAGAGCTTCATTCTTGGGCTGATATCAGTTTGATTGTGGATATAATGGAAGCTGTAAATAATAACTTCAACGAGGCGTCTAAGTTATTAAAAACAATGGTTTCTAGTGACAATTTTGAGATCAATAATGAGATGAGCACCTTAGGACTGCATTCCTCTAATGATGTATCATTGGTGAGGGGTAAATCTCCTGGCTGGGAAGAATATAACCTTAAGCAACAAAATAGAGGCCTTCAAGATAGAATTGATCCGAAACCATTCCCACCGATGCCAAGTGCCCTTTCCTCTTTGCCACCCCGTGAAAACTTGCACGGAGTTACTGGCCGTCCAGGGAGATCCTCCTCATCTTCACCTCTTCCTTCTGCTGATTCTCTAACTTCGCCAGAAAATTACAGTGCAAAGAAAATACTTGGTGATTCTAGCATTCAAAATGGAAGGAAGGTGGTTGAAGAAACCACTGACGTTTTAGCCTTTTGGAAGCTTAAGGAGCTTCATACTTGGGCTGATTTTAGCTTGATTGTGGATATAATGGAAGCTGTAGATAATAACTTCAATGAGGCATCTACTTATTTAAACAAAATGGTTTCTAGTGACAATGTTGAGATCTGTAACGAGATGAGCACCTTAGGACTGCATTCTGCTGATGGACTATCGTGCTATGGGAAGAATGATGTAACTATATCATTAGGAAGAACTGTTAATAATCCCATCCCTAGTTCCACACTAAAGGATGTGCAAGACATGCATCAAAATATTAATGATAAATTGTTTGAAAATAATTATCATGAAAGAAATTTCTTTCACAATGTTGGAAATCCAAAAATAGCTCTTTATTGCTCAAAGTCTGCTCCTATTGAGCCCGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATAGCAATGATGAGGTCTGCATCTCAACATTCAAGGGCAGCCACTAATGCCTATCTTCGGAAGGATCATGCTTCAGCCAAGTATCATTCATCAAGGGCTCAAGAACAATGGCTAGCTGCAAAAATGTTAAATGCTAAGGCAGCCAATGAAATTTTACAAACAAGGAATAGTGAAAATGGGCTCTGGAAGTTGGACCTACATGGGCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGATCACTTGCTGAAAATCGAAACTCGGAATGCCTCCAATCGGTCGTTGTCGCCAAAGAAAGCTGAAAGGAAGGGTTTCCATCGTGTTTCATCCCTTGAGTATCTTAGTTGTATGGGCGTAAAGTTGGACAAAGAATTACAATCACCATTACCTAGGCATAGGCCGACATCATTGGAAGTCATAACAGGAATAGGTAAACATAGCAGGGGGGAGGCTGCTCTACCAAAGGCCGTGACAAGTTTTCTTAGTGAAAATGGGTACCGTTTTGAACAGTTGAGGCCTGGAACGATCAGCGTTCGCCCAAAGTTTCGTAGGTAA

Protein sequence

MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTALSFLPPRENVHRVNGRSGRSFSSTPLPSADSLMSPKNFGAKKTIPGNSSIRSGKKLVEESTDVLAFWKLKELHSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKSPGWEEYNLKQQNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSSSSSPLPSADSLTSPENYSAKKILGDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKNDVTISLGRTVNNPIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAERKGFHRVSSLEYLSCMGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPGTISVRPKFRR

Homology

[Close]

BLAST of Cp4.1LG12g10490 vs. TrEMBL
Match: A0A0A0KA90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374690 PE=4 SV=1)

HSP 1 Score: 895.6 bits (2313), Expect = 3.3e-257
Identity = 471/610 (77.21%), Postives = 512/610 (83.93%), Query Frame = 1


Query: 1   MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTALSFLPPRENVHRVNGRSGRSFS 60
           MSW RGKS GWAA NLKQQN+GLQDE+D DPFPPMST LS LPPREN+  VNG SG+SFS
Sbjct: 1   MSWVRGKSSGWAAFNLKQQNNGLQDEVDRDPFPPMSTTLSSLPPRENLRGVNGHSGKSFS 60

Query: 61  STPLPSADSLMSPK----------NFGAKKTIPGNSSIRSGKKLVEESTDVLAFWKLKEL 120
             P+PSADS   P           NFGAKKTI G ++I+SGKKLVEE+ DVL+FWKLKEL
Sbjct: 61  LAPIPSADSPTLPVKFGAKKTTLGNFGAKKTILGGTNIQSGKKLVEETNDVLSFWKLKEL 120

Query: 121 HSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKS 180
           H WADISLI+DIMEAVNN+FNEAS LL TMVSSDN EINN+MSTLGLHSSND+  + GKS
Sbjct: 121 HPWADISLIMDIMEAVNNDFNEASTLLNTMVSSDNLEINNKMSTLGLHSSNDLLWMAGKS 180

Query: 181 PGWEEYNLKQQNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSSSSSPLPSAD 240
           PGWEE+NLKQ N+GLQD +D + FPPM +  SSLPP ENLHGV GR GRS +S PLPS D
Sbjct: 181 PGWEEFNLKQHNKGLQDEMDLEAFPPMLTNRSSLPPYENLHGVYGRSGRSFASEPLPSVD 240

Query: 241 SLTSPENYSAKK-ILGDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDN 300
           SLTSPENY AK  I  DSSIQ+G+KVVEE TDVLAFWKLKE+H+WADFSLIVDIM+AV+N
Sbjct: 241 SLTSPENYGAKNTIADDSSIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDIMDAVNN 300

Query: 301 NFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKNDVTISLGRTVNNPIPSSTL 360
           NF+EAST L  MVSSDN EI NE+STLGLHSA+ L C G NDV+I+  R +N PI SST+
Sbjct: 301 NFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGNNDVSIASERMINAPILSSTV 360

Query: 361 KDVQDMHQNIND------KLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYL 420
           K VQ +HQN N       KLF N+Y ERN FHN GN KIAL CSKS PIEPEWEEDDIYL
Sbjct: 361 KAVQGIHQNNNTSREDYTKLFANDYFERNSFHNTGNSKIALGCSKSVPIEPEWEEDDIYL 420

Query: 421 SHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQT 480
           SHRKDAIAMMRSASQHSRAATNAY RKDHASAKYHSSRA+EQWLAAKMLN KAANEILQT
Sbjct: 421 SHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAEEQWLAAKMLNDKAANEILQT 480

Query: 481 RNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAERKGFHRVSSLEYL 540
           RNS+NGLWKLDLHGLHAAEAVQAL DHLLKIET+NASNRSLSPKKAERKGF R SSLEYL
Sbjct: 481 RNSKNGLWKLDLHGLHAAEAVQALHDHLLKIETQNASNRSLSPKKAERKGFQRASSLEYL 540

Query: 541 SCMGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPG 594
           SCM  KLDKE  SP  RHRPTSLEVITGIGKHS+GEAALPKAV SFL+ENGYRFEQ RPG
Sbjct: 541 SCMESKLDKE--SPSSRHRPTSLEVITGIGKHSKGEAALPKAVASFLTENGYRFEQTRPG 600

[Close]

BLAST of Cp4.1LG12g10490 vs. TrEMBL
Match: F6HGK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0130g00370 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 231/439 (52.62%), Postives = 294/439 (66.97%), Query Frame = 1


Query: 163 VSLVRGKSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSS 222
           +S   GKSPGW  ++LKQ Q +GL+  +D +P+PP+PS+ +SL P  N     G  GRS 
Sbjct: 1   MSSASGKSPGWAAFDLKQRQKQGLEPELDKEPYPPIPSSFTSLRPCRN-SASNGCSGRSF 60

Query: 223 SSSPLPSADSLTSPENYSAKKIL--GDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSL 282
           SS  +PS +  T  EN   KK +  G+S  +   KV E +  V+AF KLKEL++WAD SL
Sbjct: 61  SSLLVPSVNFPTLEENKDCKKPMQGGNSGNKQQTKVAEVSNLVIAFNKLKELYSWADNSL 120

Query: 283 IVDIMEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGL---SCYGKNDVTISL 342
           I DIM AVDN+ ++AST L  MVS+ + E   E S + L+S  G    +C  + D  + L
Sbjct: 121 IEDIMAAVDNDIDKASTLLGAMVSTGSFEENKETSIVELNSTSGNPYENCKLQADNGVFL 180

Query: 343 GRTVNNPIPSSTLKDVQ-DMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPE 402
           G        SST+ D+  D ++ + D+   +    +N F +  +  + L   KS PIEPE
Sbjct: 181 GNGTVLSELSSTIGDLLIDNNKGLTDECGSSG---KNLFDDAADMTLILGRMKSIPIEPE 240

Query: 403 WEEDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAK 462
           WEEDD+YLSHRKDAI  MRSASQHSRAATNA+LR DH SAK  S +A+++W+ A+ LN+K
Sbjct: 241 WEEDDVYLSHRKDAIRFMRSASQHSRAATNAFLRGDHVSAKQFSLKAKDEWVKAERLNSK 300

Query: 463 AANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAERK-GF 522
           AANEIL  RNS N LWKLDLHGLHAAEAVQALQ+HL KIET+   NRS+SP +A+ K G 
Sbjct: 301 AANEILDIRNSNNDLWKLDLHGLHAAEAVQALQEHLWKIETQMPFNRSVSPNRAKTKVGI 360

Query: 523 HRVSSLEYLSCM-GVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSEN 582
            R  SLE  SC+   +LDK  Q  L R RPTSL+VITG G HSRG+AALP AV SFL+E+
Sbjct: 361 LRSPSLESFSCVDNEELDK--QWTLSRQRPTSLQVITGRGNHSRGQAALPTAVRSFLNEH 420

Query: 583 GYRFEQLRPGTISVRPKFR 593
           GYRFE+ RPG I+VRPKFR
Sbjct: 421 GYRFEEARPGVIAVRPKFR 433

[Close]

BLAST of Cp4.1LG12g10490 vs. TrEMBL
Match: A0A061DK57_THECC (Smr (Small MutS Related) domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_001646 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 218/435 (50.11%), Postives = 275/435 (63.22%), Query Frame = 1


Query: 167 RGKSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSSSSSP 226
           +G+S GW  ++LKQ Q +GL    +  PFPPMP++L ++ P  NL        RS SS  
Sbjct: 18  KGESSGWSAFDLKQRQKQGLVPETEDDPFPPMPNSLPAICPCINLAKSNDLSARSFSSVL 77

Query: 227 LPSADSLTSPEN--YSAKKILGDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDI 286
            PS +  TS +N  Y+    +G     +G KVVE+  + LA  KLKELH WA+ SLI D+
Sbjct: 78  KPSDNFPTSKQNKDYTKPINMGKPIENDGDKVVEQNNNNLALKKLKELHCWAENSLIEDL 137

Query: 287 MEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKN---DVTISLGRTV 346
           + A D + +EAS  L  M+S    E   E     + SA  +S +  N   D  IS G+T 
Sbjct: 138 LLAADGDVHEASALLKGMMSISGTEDIKETKNNEMSSA--ISDFPGNAYCDREISTGKTA 197

Query: 347 NNPIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDD 406
                SS   + +D    + D       HE   F    N K+ L    S P EPEWEEDD
Sbjct: 198 KLVCQSSKADEREDNLDKLTDM------HENKLFDGASNMKLILGQLTSIPFEPEWEEDD 257

Query: 407 IYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEI 466
           +YLSHRKDAI MMRSASQHSRAA+NA+LR DH +A+ HS  A+E+WLAA+ LNAKAA+EI
Sbjct: 258 VYLSHRKDAIRMMRSASQHSRAASNAFLRGDHVAAQQHSQNAREEWLAAQRLNAKAASEI 317

Query: 467 LQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPK--KAERKGFHRVS 526
           L+ RNS+N LWKLDLHGLHAAEAVQAL +HL ++ET+  + RS+SP   KA  +  H  S
Sbjct: 318 LRIRNSDNDLWKLDLHGLHAAEAVQALHEHLRRLETQVPAGRSVSPNRFKANNRIVHS-S 377

Query: 527 SLEYLSCMGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFE 586
           S+E  S M  KLDK+  S   R RPTSL+VITG+G HSRG+AALP AV SFL ENGYRF+
Sbjct: 378 SVETFSSMD-KLDKQQTS--SRQRPTSLQVITGVGNHSRGQAALPAAVRSFLIENGYRFD 437

Query: 587 QLRPGTISVRPKFRR 594
           + RPG I+VRPKFRR
Sbjct: 438 EARPGLITVRPKFRR 440

[Close]

BLAST of Cp4.1LG12g10490 vs. TrEMBL
Match: M5WI32_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006112mg PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.6e-86
Identity = 206/440 (46.82%), Postives = 271/440 (61.59%), Query Frame = 1


Query: 169 KSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENL---HGVTGRPGRSSSSS 228
           KS GW  ++LKQ Q +GL+ + D   FPP+ + L SL P EN+   + ++GRP     S 
Sbjct: 7   KSGGWAAFDLKQRQKQGLEPQTDTDHFPPILTTLPSLHPCENVSRNNDLSGRP----FSC 66

Query: 229 PLPSADSLTSPENYSAKKIL--GDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVD 288
            L   D  TS EN   K+ L  GDSS   G  + +  +      K+ +L+ WAD SLI D
Sbjct: 67  VLHPVDFPTSTENRDGKRPLLYGDSS---GTSMEDNRSSKK---KIMDLYPWADDSLIED 126

Query: 289 IMEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKNDVTISLGRTVNN 348
           IM AV ++  +AST L  MVS  + E   E           +S    N       +T + 
Sbjct: 127 IMAAVGDDITKASTLLKAMVSPSSFEENKETD---------ISKINSNSDIYQSDKTKHT 186

Query: 349 PIPSSTLKDVQDMHQNINDKLFENN--------YHERNFFHNVGNPKIALYCSKSAPIEP 408
             P  +  D+ D++      L ENN        +  +N  ++    K+ L   +S P+EP
Sbjct: 187 SFPLESAADIADLNSTFEKCLEENNIELLNAHDFCGKNLPNDAATMKLTLGSLESVPVEP 246

Query: 409 EWEEDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNA 468
           EWEEDD+YL HRKDA+ MMRSASQHS+AATNA++R DH SA+ HS++A+E+WLAA+ LN 
Sbjct: 247 EWEEDDVYLRHRKDALRMMRSASQHSKAATNAFVRGDHFSAQRHSNKAREEWLAAESLNN 306

Query: 469 KAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAE-RKG 528
           KAA +IL  RNS+N +WKLDLHGLHA+EA+QAL++HL +IET+  SN S+SP K    K 
Sbjct: 307 KAAKKILNIRNSKNDVWKLDLHGLHASEAIQALREHLQRIETKVLSNHSVSPNKVRMEKR 366

Query: 529 FHRVSSLEYLSCMGV-KLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSE 588
             R SSLE  +CM   KLD+  Q      RPTSL+VITGIG HSRG+AALP AV SFL++
Sbjct: 367 IIRSSSLESFNCMDTEKLDQ--QKAPSTQRPTSLQVITGIGNHSRGQAALPTAVGSFLND 425

Query: 589 NGYRFEQLRPGTISVRPKFR 593
           NGYRFE+LRPG I+VRPKFR
Sbjct: 427 NGYRFEELRPGVITVRPKFR 425

[Close]

BLAST of Cp4.1LG12g10490 vs. TrEMBL
Match: A0A067F5N4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014250mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.0e-85
Identity = 208/439 (47.38%), Postives = 268/439 (61.05%), Query Frame = 1


Query: 163 VSLVRGKSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSS 222
           +SL R KSPGW  ++LKQ Q +GL    D   +PP+ S L+SL   EN+   T    +  
Sbjct: 1   MSLTRVKSPGWAAFDLKQRQKQGLAPETDKDSYPPISSTLTSLRNCENVSRNTDVLVKPF 60

Query: 223 SSSPLPSADSLTSPENYSAKKILGDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIV 282
           SS   PS +  T  E         D   ++G K +E+ +  LA  KLK LH+WAD SLI 
Sbjct: 61  SSVLRPSVEFPTLTEENEC-----DYKGKHGHKAIEQHSRDLALKKLKALHSWADNSLIE 120

Query: 283 DIMEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSA--DGLSCYGKNDVTISLGRT 342
           D+MEAVDN+   AS  L  MVSS      N+ + +   S+  D   CY K      L + 
Sbjct: 121 DLMEAVDNDIKRASNLLEGMVSSSGSAEENKETKIAESSSTIDESPCYRKGGEICFLEKA 180

Query: 343 VNNPIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNP----KIALYCSKSAPIEPE 402
           ++    S+T  D       +ND   E+     +   NV +     K  +    S PIEPE
Sbjct: 181 LDLSNLSTTTGD------GVNDNFIESVDVRASSVINVSDKDDGMKSIMERLSSLPIEPE 240

Query: 403 WEEDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAK 462
           WEEDD+YL HRKDA+ MMRSASQHS+AA NAYLR DH SA+ HS +A+++WL A+ LN+K
Sbjct: 241 WEEDDVYLVHRKDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIAERLNSK 300

Query: 463 AANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAERK-GF 522
           AA EIL  RNSEN +WKLDLHGLHAAEAVQALQ+ L KIE +   N S+SPKK + K G 
Sbjct: 301 AAKEILGIRNSENDMWKLDLHGLHAAEAVQALQERLQKIEMQRPMNCSVSPKKVKSKNGM 360

Query: 523 HRVSSLEYLSCMGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENG 582
              +SLE   CM +++  + +S L R    SL+VITGIG HSRG+AALP AV +FLSE+G
Sbjct: 361 VCTASLESFGCMDMEVVDKQRSSL-RQIQKSLQVITGIGNHSRGQAALPTAVKNFLSESG 420

Query: 583 YRFEQLRPGTISVRPKFRR 594
           YRF++ RPG I+VRPKFR+
Sbjct: 421 YRFDEARPGVITVRPKFRQ 427

[Close]

BLAST of Cp4.1LG12g10490 vs. TAIR10
Match: AT5G23520.1 (AT5G23520.1 smr (Small MutS Related) domain-containing protein)

HSP 1 Score: 275.4 bits (703), Expect = 8.2e-74
Identity = 180/446 (40.36%), Postives = 248/446 (55.61%), Query Frame = 1


Query: 163 VSLVRGKSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSS 222
           +S ++GKS GW  ++LKQ Q +GL+  ++  PFPP+ +++++        GV GR  R+ 
Sbjct: 1   MSWMKGKSSGWTAFDLKQRQKQGLESEVEGDPFPPVSTSVNAS------FGVRGRLRRNH 60

Query: 223 SSSPLPSADSLTSPENYSAKKILGDSSIQNGRKVVEETTDVL---------AFWKLKELH 282
             S    +  L  P  + A     D   Q          D L         AF KLKE++
Sbjct: 61  EPSEKSFSSVLLPPSRFPALTENKDCGNQERGGCCRRKPDTLSLPVNSHDLAFTKLKEMN 120

Query: 283 TWADFSLIVDIMEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKNDV 342
           +WAD +LI D++ + +++F  A  +L  MVSS   +        G  S +  S Y   + 
Sbjct: 121 SWADDNLIRDVLLSTEDDFEMALAFLKGMVSSGKEDEEPTSKIEGYSSDNRRSEYRTFEK 180

Query: 343 TISLGRTVNNPIPSSTLKDV--QDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSA 402
           T++    +      ST +D    D+  +       N      F  ++      +   +S 
Sbjct: 181 TVTSSVKM---AARSTFEDAGKYDLENSDGSSFLVNASDNEKFPDDISELDSIIQRLQSI 240

Query: 403 PIEPEWEEDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAK 462
           PIEPEWEEDD+YLSHRKDA+ +MRSAS HSRAA NA+ R DHASAK HS +A+E WLAA+
Sbjct: 241 PIEPEWEEDDLYLSHRKDALKVMRSASNHSRAAQNAFQRYDHASAKQHSDKAREDWLAAE 300

Query: 463 MLNAKAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAE 522
            LNA+AA +I+   N +N +WKLDLHGLHA EAVQALQ+ L  IE     NRS+SP +  
Sbjct: 301 KLNAEAAKKIIGITNKDNDIWKLDLHGLHATEAVQALQERLQMIEGHFTVNRSVSPNRGR 360

Query: 523 RKGFH-RVSSLEYLSCMGVKLDKE---LQSPLPRHRPTSLEVITGIGKHSRGEAALPKAV 582
            K    R +S E       +LD+E    Q    R    SL+VITGIGKHSRG+A+LP AV
Sbjct: 361 SKNAALRSASQEPFG----RLDEEGMHCQRTSSRELRNSLQVITGIGKHSRGQASLPLAV 420

Query: 583 TSFLSENGYRFEQLRPGTISVRPKFR 593
            +F  +N YRF++ RPG I+VRPKFR
Sbjct: 421 KTFFEDNRYRFDETRPGVITVRPKFR 433

[Close]

BLAST of Cp4.1LG12g10490 vs. NCBI nr
Match: gi|659100734|ref|XP_008451240.1| (PREDICTED: uncharacterized protein LOC103492590 [Cucumis melo])

HSP 1 Score: 897.9 bits (2319), Expect = 9.6e-258
Identity = 474/610 (77.70%), Postives = 510/610 (83.61%), Query Frame = 1


Query: 1   MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTALSFLPPRENVHRVNGRSGRSFS 60
           MSW RGKS GWAA NLKQQN+G+QDE+D DPFPPMST LS LPPREN+  VNGRSGRSFS
Sbjct: 1   MSWVRGKSSGWAAFNLKQQNNGIQDEVDGDPFPPMSTTLSSLPPRENLRGVNGRSGRSFS 60

Query: 61  STPLPSADSLMSPK----------NFGAKKTIPGNSSIRSGKKLVEESTDVLAFWKLKEL 120
             P+PSADS   P           NF AKKTI G S+I+SGKK+VEE+ DVL+FWKLKEL
Sbjct: 61  FAPIPSADSPTLPGKCGAKKTTLGNFSAKKTILGASNIQSGKKMVEETNDVLSFWKLKEL 120

Query: 121 HSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKS 180
           H WADISLI+DIMEAVNN+FNEAS LL TMVSSDN EINNEMS LGLHSSND+S + GKS
Sbjct: 121 HPWADISLIMDIMEAVNNDFNEASTLLNTMVSSDNLEINNEMSNLGLHSSNDLSWMMGKS 180

Query: 181 PGWEEYNLKQQNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSSSSSPLPSAD 240
           PGWEE+NL+Q NRGLQ   DP+ FPPM +   SLPP ENLHGV GR GRS +S PLPSAD
Sbjct: 181 PGWEEFNLQQHNRGLQGEKDPEAFPPMLTNHPSLPPYENLHGVYGRLGRSFASEPLPSAD 240

Query: 241 SLTSPENYSAKKIL-GDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDN 300
           SLTSP NY AK  +  DS IQ+G+KVVEE TDVLAFWKLKE+H+WADFSLIVDIM+AV+N
Sbjct: 241 SLTSPGNYGAKNTIPDDSGIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDIMDAVNN 300

Query: 301 NFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKNDVTISLGRTVNNPIPSSTL 360
           NF+EAST L  MVSSDN EI NE+STLGLHSA+ L C G NDV+IS  RT+N PI S TL
Sbjct: 301 NFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGDNDVSISSERTINGPILSPTL 360

Query: 361 KDVQDMHQNIND------KLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYL 420
           K  Q MHQN N       KLF N+Y ERNFF N GN KIAL CSKS PIEPEWEEDDIYL
Sbjct: 361 KAAQGMHQNDNTGGEDCTKLFVNDYFERNFFPNAGNSKIALGCSKSVPIEPEWEEDDIYL 420

Query: 421 SHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQT 480
           SHRKDAIAMMRSASQHSRAATNAY RKDHASAKYHSSRAQEQWLAAKMLN KAANEILQT
Sbjct: 421 SHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAQEQWLAAKMLNDKAANEILQT 480

Query: 481 RNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAERKGFHRVSSLEYL 540
           RNS+NGLWKLDLHGLHAAEAVQALQDHLLKIET+NASNRSLSPKKAERKGF R SSLEYL
Sbjct: 481 RNSKNGLWKLDLHGLHAAEAVQALQDHLLKIETQNASNRSLSPKKAERKGFQRASSLEYL 540

Query: 541 SCMGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPG 594
           SCM  KLDKE  SP  RHRPTSLEVITGIGKHS+GEAALPKAVTSFL+ENGYRFEQ RPG
Sbjct: 541 SCMDAKLDKE--SPSSRHRPTSLEVITGIGKHSKGEAALPKAVTSFLTENGYRFEQTRPG 600

[Close]

BLAST of Cp4.1LG12g10490 vs. NCBI nr
Match: gi|449462475|ref|XP_004148966.1| (PREDICTED: uncharacterized protein LOC101223137 [Cucumis sativus])

HSP 1 Score: 895.6 bits (2313), Expect = 4.7e-257
Identity = 471/610 (77.21%), Postives = 512/610 (83.93%), Query Frame = 1


Query: 1   MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTALSFLPPRENVHRVNGRSGRSFS 60
           MSW RGKS GWAA NLKQQN+GLQDE+D DPFPPMST LS LPPREN+  VNG SG+SFS
Sbjct: 1   MSWVRGKSSGWAAFNLKQQNNGLQDEVDRDPFPPMSTTLSSLPPRENLRGVNGHSGKSFS 60

Query: 61  STPLPSADSLMSPK----------NFGAKKTIPGNSSIRSGKKLVEESTDVLAFWKLKEL 120
             P+PSADS   P           NFGAKKTI G ++I+SGKKLVEE+ DVL+FWKLKEL
Sbjct: 61  LAPIPSADSPTLPVKFGAKKTTLGNFGAKKTILGGTNIQSGKKLVEETNDVLSFWKLKEL 120

Query: 121 HSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKS 180
           H WADISLI+DIMEAVNN+FNEAS LL TMVSSDN EINN+MSTLGLHSSND+  + GKS
Sbjct: 121 HPWADISLIMDIMEAVNNDFNEASTLLNTMVSSDNLEINNKMSTLGLHSSNDLLWMAGKS 180

Query: 181 PGWEEYNLKQQNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSSSSSPLPSAD 240
           PGWEE+NLKQ N+GLQD +D + FPPM +  SSLPP ENLHGV GR GRS +S PLPS D
Sbjct: 181 PGWEEFNLKQHNKGLQDEMDLEAFPPMLTNRSSLPPYENLHGVYGRSGRSFASEPLPSVD 240

Query: 241 SLTSPENYSAKK-ILGDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDN 300
           SLTSPENY AK  I  DSSIQ+G+KVVEE TDVLAFWKLKE+H+WADFSLIVDIM+AV+N
Sbjct: 241 SLTSPENYGAKNTIADDSSIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDIMDAVNN 300

Query: 301 NFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKNDVTISLGRTVNNPIPSSTL 360
           NF+EAST L  MVSSDN EI NE+STLGLHSA+ L C G NDV+I+  R +N PI SST+
Sbjct: 301 NFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGNNDVSIASERMINAPILSSTV 360

Query: 361 KDVQDMHQNIND------KLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYL 420
           K VQ +HQN N       KLF N+Y ERN FHN GN KIAL CSKS PIEPEWEEDDIYL
Sbjct: 361 KAVQGIHQNNNTSREDYTKLFANDYFERNSFHNTGNSKIALGCSKSVPIEPEWEEDDIYL 420

Query: 421 SHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQT 480
           SHRKDAIAMMRSASQHSRAATNAY RKDHASAKYHSSRA+EQWLAAKMLN KAANEILQT
Sbjct: 421 SHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAEEQWLAAKMLNDKAANEILQT 480

Query: 481 RNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAERKGFHRVSSLEYL 540
           RNS+NGLWKLDLHGLHAAEAVQAL DHLLKIET+NASNRSLSPKKAERKGF R SSLEYL
Sbjct: 481 RNSKNGLWKLDLHGLHAAEAVQALHDHLLKIETQNASNRSLSPKKAERKGFQRASSLEYL 540

Query: 541 SCMGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPG 594
           SCM  KLDKE  SP  RHRPTSLEVITGIGKHS+GEAALPKAV SFL+ENGYRFEQ RPG
Sbjct: 541 SCMESKLDKE--SPSSRHRPTSLEVITGIGKHSKGEAALPKAVASFLTENGYRFEQTRPG 600

[Close]

BLAST of Cp4.1LG12g10490 vs. NCBI nr
Match: gi|225463171|ref|XP_002267329.1| (PREDICTED: uncharacterized protein LOC100263151 [Vitis vinifera])

HSP 1 Score: 378.3 bits (970), Expect = 2.5e-101
Identity = 231/439 (52.62%), Postives = 294/439 (66.97%), Query Frame = 1


Query: 163 VSLVRGKSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSS 222
           +S   GKSPGW  ++LKQ Q +GL+  +D +P+PP+PS+ +SL P  N     G  GRS 
Sbjct: 1   MSSASGKSPGWAAFDLKQRQKQGLEPELDKEPYPPIPSSFTSLRPCRN-SASNGCSGRSF 60

Query: 223 SSSPLPSADSLTSPENYSAKKIL--GDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSL 282
           SS  +PS +  T  EN   KK +  G+S  +   KV E +  V+AF KLKEL++WAD SL
Sbjct: 61  SSLLVPSVNFPTLEENKDCKKPMQGGNSGNKQQTKVAEVSNLVIAFNKLKELYSWADNSL 120

Query: 283 IVDIMEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGL---SCYGKNDVTISL 342
           I DIM AVDN+ ++AST L  MVS+ + E   E S + L+S  G    +C  + D  + L
Sbjct: 121 IEDIMAAVDNDIDKASTLLGAMVSTGSFEENKETSIVELNSTSGNPYENCKLQADNGVFL 180

Query: 343 GRTVNNPIPSSTLKDVQ-DMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPE 402
           G        SST+ D+  D ++ + D+   +    +N F +  +  + L   KS PIEPE
Sbjct: 181 GNGTVLSELSSTIGDLLIDNNKGLTDECGSSG---KNLFDDAADMTLILGRMKSIPIEPE 240

Query: 403 WEEDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAK 462
           WEEDD+YLSHRKDAI  MRSASQHSRAATNA+LR DH SAK  S +A+++W+ A+ LN+K
Sbjct: 241 WEEDDVYLSHRKDAIRFMRSASQHSRAATNAFLRGDHVSAKQFSLKAKDEWVKAERLNSK 300

Query: 463 AANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPKKAERK-GF 522
           AANEIL  RNS N LWKLDLHGLHAAEAVQALQ+HL KIET+   NRS+SP +A+ K G 
Sbjct: 301 AANEILDIRNSNNDLWKLDLHGLHAAEAVQALQEHLWKIETQMPFNRSVSPNRAKTKVGI 360

Query: 523 HRVSSLEYLSCM-GVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSEN 582
            R  SLE  SC+   +LDK  Q  L R RPTSL+VITG G HSRG+AALP AV SFL+E+
Sbjct: 361 LRSPSLESFSCVDNEELDK--QWTLSRQRPTSLQVITGRGNHSRGQAALPTAVRSFLNEH 420

Query: 583 GYRFEQLRPGTISVRPKFR 593
           GYRFE+ RPG I+VRPKFR
Sbjct: 421 GYRFEEARPGVIAVRPKFR 433

[Close]

BLAST of Cp4.1LG12g10490 vs. NCBI nr
Match: gi|590709627|ref|XP_007048605.1| (Smr (Small MutS Related) domain-containing protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93
Identity = 218/435 (50.11%), Postives = 275/435 (63.22%), Query Frame = 1


Query: 167 RGKSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENLHGVTGRPGRSSSSSP 226
           +G+S GW  ++LKQ Q +GL    +  PFPPMP++L ++ P  NL        RS SS  
Sbjct: 18  KGESSGWSAFDLKQRQKQGLVPETEDDPFPPMPNSLPAICPCINLAKSNDLSARSFSSVL 77

Query: 227 LPSADSLTSPEN--YSAKKILGDSSIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDI 286
            PS +  TS +N  Y+    +G     +G KVVE+  + LA  KLKELH WA+ SLI D+
Sbjct: 78  KPSDNFPTSKQNKDYTKPINMGKPIENDGDKVVEQNNNNLALKKLKELHCWAENSLIEDL 137

Query: 287 MEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSADGLSCYGKN---DVTISLGRTV 346
           + A D + +EAS  L  M+S    E   E     + SA  +S +  N   D  IS G+T 
Sbjct: 138 LLAADGDVHEASALLKGMMSISGTEDIKETKNNEMSSA--ISDFPGNAYCDREISTGKTA 197

Query: 347 NNPIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDD 406
                SS   + +D    + D       HE   F    N K+ L    S P EPEWEEDD
Sbjct: 198 KLVCQSSKADEREDNLDKLTDM------HENKLFDGASNMKLILGQLTSIPFEPEWEEDD 257

Query: 407 IYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEI 466
           +YLSHRKDAI MMRSASQHSRAA+NA+LR DH +A+ HS  A+E+WLAA+ LNAKAA+EI
Sbjct: 258 VYLSHRKDAIRMMRSASQHSRAASNAFLRGDHVAAQQHSQNAREEWLAAQRLNAKAASEI 317

Query: 467 LQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETRNASNRSLSPK--KAERKGFHRVS 526
           L+ RNS+N LWKLDLHGLHAAEAVQAL +HL ++ET+  + RS+SP   KA  +  H  S
Sbjct: 318 LRIRNSDNDLWKLDLHGLHAAEAVQALHEHLRRLETQVPAGRSVSPNRFKANNRIVHS-S 377

Query: 527 SLEYLSCMGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFE 586
           S+E  S M  KLDK+  S   R RPTSL+VITG+G HSRG+AALP AV SFL ENGYRF+
Sbjct: 378 SVETFSSMD-KLDKQQTS--SRQRPTSLQVITGVGNHSRGQAALPAAVRSFLIENGYRFD 437

Query: 587 QLRPGTISVRPKFRR 594
           + RPG I+VRPKFRR
Sbjct: 438 EARPGLITVRPKFRR 440

[Close]

BLAST of Cp4.1LG12g10490 vs. NCBI nr
Match: gi|645219001|ref|XP_008233514.1| (PREDICTED: uncharacterized protein LOC103332547 isoform X1 [Prunus mume])

HSP 1 Score: 331.6 bits (849), Expect = 2.7e-87
Identity = 209/460 (45.43%), Postives = 278/460 (60.43%), Query Frame = 1


Query: 152 MSTLGLHSSNDVSLVRGKSPGWEEYNLKQ-QNRGLQDRIDPKPFPPMPSALSSLPPRENL 211
           M+   ++    +S  R KS GW  ++LKQ Q +GL+ + D   FPP+ + L SL P EN+
Sbjct: 1   MTVASIYLCRKMSRGRAKSGGWAAFDLKQRQKQGLEPQTDTDHFPPILTTLPSLHPCENV 60

Query: 212 ---HGVTGRPGRSSSSSPLPSADSLTSPENYSAKKIL--GDSS---IQNGRKVVEETTDV 271
              + ++GRP     S  L   D  TS EN   K++L  GDSS   +++ R   +     
Sbjct: 61  SRNNDLSGRP----FSCVLHPVDFPTSTENRDGKRLLLYGDSSGTSMEDNRSTKK----- 120

Query: 272 LAFWKLKELHTWADFSLIVDIMEAVDNNFNEASTYLNKMVSSDNVEICNEMSTLGLHSAD 331
               K+ +L+ WAD SLI DIM AV ++  +AST L  MVS  + E   E          
Sbjct: 121 ----KIMDLYPWADDSLIEDIMAAVGDDITKASTLLKAMVSPSSFEENKETD-------- 180

Query: 332 GLSCYGKNDVTISLGRTVNNPIPSSTLKDVQDMHQNINDKLFENNYHERNFF-------- 391
            +S    N       +T +   P  +  D+ D++      L ENN    N          
Sbjct: 181 -ISKINSNSDIYQSDKTKHTSFPLESAADIADLNSTFEKCLEENNIELLNAHDFCGKKLP 240

Query: 392 HNVGNPKIALYCSKSAPIEPEWEEDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHAS 451
           ++    K+ L   +S P+EPEWEEDD+YL HRKDA+ MMRSASQHS+AATNA++R DH S
Sbjct: 241 NDAATTKLTLGSLESVPVEPEWEEDDVYLRHRKDALRMMRSASQHSKAATNAFVRGDHFS 300

Query: 452 AKYHSSRAQEQWLAAKMLNAKAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKI 511
           A+ HS++A+E+WLAA+ LN KAA +IL  RNS+N +WKLDLHGLHA+EA+QAL++HL +I
Sbjct: 301 AQRHSNKAREEWLAAESLNNKAAKKILNIRNSKNDVWKLDLHGLHASEAIQALREHLQRI 360

Query: 512 ETRNASNRSLSPKKAE-RKGFHRVSSLEYLSCMGV-KLDKELQSPLPRHRPTSLEVITGI 571
           ET+  SN S+SP K    K   R SSLE  +CM   KLD+  Q      RPTSL+VITGI
Sbjct: 361 ETKVLSNHSVSPNKVRMEKRIIRSSSLESFNCMDTEKLDQ--QKAPSTQRPTSLQVITGI 420

Query: 572 GKHSRGEAALPKAVTSFLSENGYRFEQLRPGTISVRPKFR 593
           G HSRG+AALP AV SFL++NGYRFE+LRPG I+VRPKFR
Sbjct: 421 GNHSRGQAALPTAVRSFLNDNGYRFEELRPGVITVRPKFR 436

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g10490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA90_CUCSA	3.3e-257	77.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374690 PE=4 SV=1	[more]
F6HGK1_VITVI	1.8e-101	52.62	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0130g00370 PE=4 SV=...	[more]
A0A061DK57_THECC	1.4e-93	50.11	Smr (Small MutS Related) domain-containing protein, putative isoform 1 OS=Theobr...	[more]
M5WI32_PRUPE	3.6e-86	46.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006112mg PE=4 SV=1	[more]
A0A067F5N4_CITSI	1.0e-85	47.38	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014250mg PE=4 SV=1	[more]

BLAST of Cp4.1LG12g10490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23520.1	8.2e-74	40.36	smr (Small MutS Related) domain-containing protein	[more]

BLAST of Cp4.1LG12g10490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100734\|ref\|XP_008451240.1\|	9.6e-258	77.70	PREDICTED: uncharacterized protein LOC103492590 [Cucumis melo]	[more]
gi\|449462475\|ref\|XP_004148966.1\|	4.7e-257	77.21	PREDICTED: uncharacterized protein LOC101223137 [Cucumis sativus]	[more]
gi\|225463171\|ref\|XP_002267329.1\|	2.5e-101	52.62	PREDICTED: uncharacterized protein LOC100263151 [Vitis vinifera]	[more]
gi\|590709627\|ref\|XP_007048605.1\|	2.0e-93	50.11	Smr (Small MutS Related) domain-containing protein, putative isoform 1 [Theobrom...	[more]
gi\|645219001\|ref\|XP_008233514.1\|	2.7e-87	45.43	PREDICTED: uncharacterized protein LOC103332547 isoform X1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013899	DUF1771
IPR002625	Smr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10490.1	Cp4.1LG12g10490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	PFAM	PF01713	Smr	coord: 473..573 score: 2.
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 470..590 score: 2.6
IPR002625	Smr domain	PROFILE	PS50828	SMR	coord: 473..590 score: 20
IPR002625	Smr domain	unknown	SSF160443	SMR domain-like	coord: 542..588 score: 1.83E-10coord: 471..502 score: 1.83
IPR013899	Domain of unknown function DUF1771	PFAM	PF08590	DUF1771	coord: 402..465 score: 1.3
IPR013899	Domain of unknown function DUF1771	SMART	SM01162	DUF1771_2	coord: 401..466 score: 3.8
None	No IPR available	PANTHER	PTHR13308	UNCHARACTERIZED	coord: 58..145 score: 6.9E-69coord: 352..511 score: 6.9E-69coord: 546..593 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g10490	Cucsa.388390	Cucumber (Gy14) v1	cgycpeB1027
Cp4.1LG12g10490	CmaCh17G013380	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g10490	CmoCh17G013030	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g10490	Cla014840	Watermelon (97103) v1	cpewmB135
Cp4.1LG12g10490	Csa7G374690	Cucumber (Chinese Long) v2	cpecuB157
Cp4.1LG12g10490	MELO3C015720	Melon (DHL92) v3.5.1	cpemeB120
Cp4.1LG12g10490	ClCG09G007860	Watermelon (Charleston Gray)	cpewcgB129
Cp4.1LG12g10490	CSPI07G15450	Wild cucumber (PI 183967)	cpecpiB159
Cp4.1LG12g10490	Lsi02G022020	Bottle gourd (USVL1VR-Ls)	cpelsiB111
Cp4.1LG12g10490	MELO3C015720.2	Melon (DHL92) v3.6.1	cpemedB146
Cp4.1LG12g10490	CsaV3_7G027220	Cucumber (Chinese Long) v3	cpecucB0182
Cp4.1LG12g10490	Bhi09G000976	Wax gourd	cpewgoB0209
Cp4.1LG12g10490	CsGy7G013940	Cucumber (Gy14) v2	cgybcpeB900
Cp4.1LG12g10490	Carg11515	Silver-seed gourd	carcpeB0018

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g10490	Cucurbita maxima (Rimu)	cmacpeB896
Cp4.1LG12g10490	Cucurbita moschata (Rifu)	cmocpeB834
Cp4.1LG12g10490	Silver-seed gourd	carcpeB0116
Cp4.1LG12g10490	Cucurbita pepo (Zucchini)	cpecpeB173