CmaCh17G013380 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G013380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Smr (Small MutS-related) domain protein
Location	Cma_Chr17 : 8988334 .. 8992506 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGGGGAGGGGTAAATCTCCTGGCTGGGCAGCGGTTAACCTTAAGCAACAGAATAGTGGCCTTCAAGATGAAATTGACCCGGACCCATTCCCACCAATGTCTACCGCTCATTCCTTTCTGCCACCCTGTGAAAACGTACACAGAGTTAATGGTCGTTCAGGGAGGTCTTCACAAGAAAATTTTGGTGCAGAAAAGACAATACTTGGTAATTCTAGCATTCGAAGTAGCAAGAAGTTGGTTGAAGAATCCACTGATGTTTTAGCCTTCTGGAAGCTTAAAGAGCTTCATTCTTGGGCTGATATCAGCTTGATTGTGGATATAATGGAAGCTGTAAATAATAACTTCAACGAGGCGTCTAAGTTATTAAAAACAATGGTTTCTAGTGACAATTTTGAGATCAATAATGAGATGAGCACCTTAGGACTGCATTCCTCTAATGATGTATCATTGGTGAGGGGTAAATCTTCTGGCTGGGAAGAATTTAACCTTAAGCAACAAAATAGAGGCTTTCAAGATAGAATTGATCCGAAACCATTCCCACCGATGCCAAGTTCCCTTTCCTCTTTGCCACCCCGTGAAAACTTGCACGGTGTTAATGGCCGTCCAGGGGGATCCTCCTCATCTTCACCTCTTCCTTCTGCTGATTCTCTAACTTTGCCAGAAAATTACGGTGCAAAGAAAATACTTGGTGATTCTACCATTCAAAATGGAAGGAAGGTGGTTGAAGAAACCACTGACGTTTTAGCCTTTTGGAAGCTTAAGGAGCTTCATACTTGGGCTGATTTTAGCTTGATTGTGGATATAATGGAAGCTGTAGATAATAACTTCAATGAGGCGTCTACTTTTTTAAACAAAATGGTTTCTAGTGACAATGTTGAGATCTGTAACGAGATGAGCACCCTAGGACTGCATTCTGCTGATGGATTATCGTGCAATGGGAAGAATGATGTAACCATATCATCAGAAAGAACTGTTAATAATCCCATCCCTAGTTCCACACTAAAGGATGTGCAAGACATGCATCAAAATATTAATGATAAATTGTTTGAAAATAATTATCATGAAAGAAATTTCTTTCACAATGTTGGAAATCCAAAAATAGCTCTTTATTGCTCAAAGTCTGCTCCTATTGAGCCCGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATAGCAATGATGAGGTAAATAAGTCTTCTGTCTACTTTATTATCGGGTTGTTTTTCTACTTCAATTTAATTTTTTTTTTCCTTAATAGATATATTTGTTAAAATTTCCATAACAAAAACTTATTTTTCTTTTTCCTGCTTCTTTTATCATTGTGATGCACCACTGGGTTTCTGGGGTTCTTTGTATTTATTATATATTTTTACCGTGTGTGAGAAGAACGTTTTAAAGAATTTATATGTATGGGGGATCTGGTTGTACCTTGAGTTATGAGTAGACAACAGTCTGTTTGTATGAATAAGCTAATTTATGTTGATAGCTCAAGCTTTGGAAATTAATAGAAAGTCGACGTGATAAGAGGGAGTTATTGAATCCAAGTCCATGGTAATTTTTTGTTTTTAATTCAAATTGACACTGTAATCATACTCAAAAGAAATGTTAAAAAATAATTGTTGGACAATTATTCTTGACCTAGGCTCTCTTGTATTGTGGCTTTGGTCTTATGTTGTAGTGTAAAATATATGGTTCTTGGGAGAAGGTTCAAGTACTCAATGCTATAGGAGTTGATGTCTCGCTTAATATGATCCGATTTATTTGTAATTTTCTTTAATCAATAGGTCTGCATCTCAACATTCAAGGGTAGCCACTAATGCCTATCTTCGGAAGGATCATGCTTCTGCCAAGTATCATTCATCAAGGGCTCAAGAACAATGGCTAGCTGCAAAAATGTTAAATGCTAAGGCAGCCAATGAAATTTTACAAACAAGGAATAGTGAAAATGGGCTCTGGAAGTTGGACTTACATGGGCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGATCACTTGCTGAAAATCGAAACTTGGAATGCCTCCAATCGGTCGTTGTCGCCAAAGAAAGCTGAAAGGAAGGGTTTCTATCGTGTTTCATCCCTTGAGTATCTTAGTTGTCTGGGCGTAAAGTTGGACAAAGAATTACAATCACCATTACCTAGGCATAGGCCGACATCATTGGAAGTCATAACAGGTAAATTGTATCTGTTGCTGTTTAACTCAACATTTGTGTTTTCTTAAAGTTAGGTTTAACAGGCAAATTTCATTCTTTTCACATTTGTTTTTCTTGAGAATGGAATCATTGTATGACAATGTAACTGATAACTTTAGAGGCTGACTACGCTTGTGTTGCCTTTAGCCTTTATCAATTCCAGAGATAGATTGGCATTTTCTACATTATTCAATACTTTTGGTTACAGTAGCACAGTGGACATTGTGGTATGCCAACCTATTAATTGAAAGTTTTCTCTCTGCTGTATCTAGGCTTCAATCCTAAACGCTCTTCAAAACCCTCCTCACGTGCTAGTATCTAGTAGTTTTTTGGCTTATTATTCCATATTGCATATAAAAATCTATCAAGATTTGTTCTTGGGTTGATAATCCACTATTGATAGGGAAGAGTTACATCTGCCACCATGCGAGAAAAGGCTGTATGAATTGTGAGAAAAAGGTTTTAAGAGTGTGGTAACCTTTCCCTAGTAGATAAGAGAATGAAGCATTCCTTATAAGGGTGTGCAAACCTCTCCATAGTGGACGCGTTTTAAAATCTTGAGGGGAAGTCCCGAATGGAAAACCCAAAGAGGACAATGTTTTCTAGCGGCGGGCTTGGGCTGTTACGAATGGTATCAAAGCCAGACACCGGGCGGTGTGCCAGCAAGGACGCTGGGTCCCCAAGGTGGTGGATTGTGAGTTCCCACATCGGTTGGAGAGGGGAACGAATCATTTCTTATAAGGGAGTAGAAACCTCTCCTTAGTGGACGCGTTTTAAAACCTTGAGGGGAAGCCCATAAGGGAAAGTTCAAAGAGGACCATGAGCTTATTTCTTTGCATTTATTGTGTTTAGATTTGCATGCGAGAGACATTCAAGTAGTCTCAATCAAACTATCTTGTGAAGTGATTCGAATCACAAGTTAAATACTCTGGATCTTGATCATCTAGGGAAGTCATTCTAAAACTTTCCCTTGGGATGATTCTTTATCGTTTTTGGGGGTTTTTGGATAATTTCGATCTAAAAGTCTCATTCTTCAACAAGATCGTTAGATCAAATCTCAAGAGTTTCATAACCCTTGGTGCATCTTACCCATGCGTGTACTTGGAGAAAGGCACTTGGGGAAGTAATGAGCTATTAGTTAGCTGGGGATGGCCGGGTGGATGCATGTTTCGCGACTGCGGGTCCCATTTGTAATGAAGGACAAAATGGAAATCTGCTTAGCTGAGGCCAGGAGGCTATATATATATTAGATATAACAATGAGTTTCATCATAGGTTGATTTGACTGAAGGGAAAGATTTAAATGTCGGTGACGCTAGCATATTTTTTTCGTAAAATAACGAATTCTCATGTGCACTACTGATTCAAACATTGACGATTGTACTCATGATGTTTTGTTCGTTCTCAAAGGAATAGGTAAACATAGCAGGGGGGAGGCTGCTCTACCAAAGGCCGTGACAAGTTTTCTTAGTGAAAATGGGTGAGTCTACTTTTCTTTCCATTTTGACTTTAACCAAAAAGAAGGGTAAAAATGTTTATAGATTCATTCTACTTCAACCACTTGATAATTTGCAGGTACCGTTTTGAACAGTTGAGGCCTGGAACGATCAGCGTTCGACCGAAGTTTCGTAGGTAAACGACTCTCCCTTATTAGTAGTAGCTTCAAAGTTATTCAGTCAGAACGTAGATTAGAGTTGTTGGAGGTTGGGTAAGTGAAACGTGTAAAATGACTGAAAATGTTCGTTATTTAGAAGGAGCTCTGTAGGATTGGTTGTTAACCACATTACTGCATTGTTATTTTGTTGTCTTTCCTGGAAAAGATAGCACCTAGGAAGAAGAGGTTAGAAGAACTCTGGAATCCTGGGATTGTATTCTATTATGATTCATTATGGCGATTGCACTAGTTGAGTCTACTTCTCTAATCCATTGAAAATATAATAGCTG

mRNA sequence

ATGTCGTGGGGGAGGGGTAAATCTCCTGGCTGGGCAGCGGTTAACCTTAAGCAACAGAATAGTGGCCTTCAAGATGAAATTGACCCGGACCCATTCCCACCAATGTCTACCGCTCATTCCTTTCTGCCACCCTGTGAAAACGTACACAGAGTTAATGGTCGTTCAGGGAGGTCTTCACAAGAAAATTTTGGTGCAGAAAAGACAATACTTGGTAATTCTAGCATTCGAAGTAGCAAGAAGTTGGTTGAAGAATCCACTGATGTTTTAGCCTTCTGGAAGCTTAAAGAGCTTCATTCTTGGGCTGATATCAGCTTGATTGTGGATATAATGGAAGCTGTAAATAATAACTTCAACGAGGCGTCTAAGTTATTAAAAACAATGGTTTCTAGTGACAATTTTGAGATCAATAATGAGATGAGCACCTTAGGACTGCATTCCTCTAATGATGTATCATTGGTGAGGGGTAAATCTTCTGGCTGGGAAGAATTTAACCTTAAGCAACAAAATAGAGGCTTTCAAGATAGAATTGATCCGAAACCATTCCCACCGATGCCAAGTTCCCTTTCCTCTTTGCCACCCCGTGAAAACTTGCACGGTGTTAATGGCCGTCCAGGGGGATCCTCCTCATCTTCACCTCTTCCTTCTGCTGATTCTCTAACTTTGCCAGAAAATTACGGTGCAAAGAAAATACTTGGTGATTCTACCATTCAAAATGGAAGGAAGGTGGTTGAAGAAACCACTGACGTTTTAGCCTTTTGGAAGCTTAAGGAGCTTCATACTTGGGCTGATTTTAGCTTGATTGTGGATATAATGGAAGCTGTAGATAATAACTTCAATGAGGCGTCTACTTTTTTAAACAAAATGGTTTCTAGTGACAATGTTGAGATCTGTAACGAGATGAGCACCCTAGGACTGCATTCTGCTGATGGATTATCGTGCAATGGGAAGAATGATGTAACCATATCATCAGAAAGAACTGTTAATAATCCCATCCCTAGTTCCACACTAAAGGATGTGCAAGACATGCATCAAAATATTAATGATAAATTGTTTGAAAATAATTATCATGAAAGAAATTTCTTTCACAATGTTGGAAATCCAAAAATAGCTCTTTATTGCTCAAAGTCTGCTCCTATTGAGCCCGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATAGCAATGATGAGGTCTGCATCTCAACATTCAAGGGTAGCCACTAATGCCTATCTTCGGAAGGATCATGCTTCTGCCAAGTATCATTCATCAAGGGCTCAAGAACAATGGCTAGCTGCAAAAATGTTAAATGCTAAGGCAGCCAATGAAATTTTACAAACAAGGAATAGTGAAAATGGGCTCTGGAAGTTGGACTTACATGGGCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGATCACTTGCTGAAAATCGAAACTTGGAATGCCTCCAATCGGTCGTTGTCGCCAAAGAAAGCTGAAAGGAAGGGTTTCTATCGTGTTTCATCCCTTGAGTATCTTAGTTGTCTGGGCGTAAAGTTGGACAAAGAATTACAATCACCATTACCTAGGCATAGGCCGACATCATTGGAAGTCATAACAGGAATAGGTAAACATAGCAGGGGGGAGGCTGCTCTACCAAAGGCCGTGACAAGTTTTCTTAGTGAAAATGGGTACCGTTTTGAACAGTTGAGGCCTGGAACGATCAGCGTTCGACCGAAGTTTCGTAGGTAAACGACTCTCCCTTATTAGTAGTAGCTTCAAAGTTATTCAGTCAGAACGTAGATTAGAGTTGTTGGAGGTTGGGTAAGTGAAACGTGTAAAATGACTGAAAATGTTCGTTATTTAGAAGGAGCTCTGTAGGATTGGTTGTTAACCACATTACTGCATTGTTATTTTGTTGTCTTTCCTGGAAAAGATAGCACCTAGGAAGAAGAGGTTAGAAGAACTCTGGAATCCTGGGATTGTATTCTATTATGATTCATTATGGCGATTGCACTAGTTGAGTCTACTTCTCTAATCCATTGAAAATATAATAGCTG

Coding sequence (CDS)

ATGTCGTGGGGGAGGGGTAAATCTCCTGGCTGGGCAGCGGTTAACCTTAAGCAACAGAATAGTGGCCTTCAAGATGAAATTGACCCGGACCCATTCCCACCAATGTCTACCGCTCATTCCTTTCTGCCACCCTGTGAAAACGTACACAGAGTTAATGGTCGTTCAGGGAGGTCTTCACAAGAAAATTTTGGTGCAGAAAAGACAATACTTGGTAATTCTAGCATTCGAAGTAGCAAGAAGTTGGTTGAAGAATCCACTGATGTTTTAGCCTTCTGGAAGCTTAAAGAGCTTCATTCTTGGGCTGATATCAGCTTGATTGTGGATATAATGGAAGCTGTAAATAATAACTTCAACGAGGCGTCTAAGTTATTAAAAACAATGGTTTCTAGTGACAATTTTGAGATCAATAATGAGATGAGCACCTTAGGACTGCATTCCTCTAATGATGTATCATTGGTGAGGGGTAAATCTTCTGGCTGGGAAGAATTTAACCTTAAGCAACAAAATAGAGGCTTTCAAGATAGAATTGATCCGAAACCATTCCCACCGATGCCAAGTTCCCTTTCCTCTTTGCCACCCCGTGAAAACTTGCACGGTGTTAATGGCCGTCCAGGGGGATCCTCCTCATCTTCACCTCTTCCTTCTGCTGATTCTCTAACTTTGCCAGAAAATTACGGTGCAAAGAAAATACTTGGTGATTCTACCATTCAAAATGGAAGGAAGGTGGTTGAAGAAACCACTGACGTTTTAGCCTTTTGGAAGCTTAAGGAGCTTCATACTTGGGCTGATTTTAGCTTGATTGTGGATATAATGGAAGCTGTAGATAATAACTTCAATGAGGCGTCTACTTTTTTAAACAAAATGGTTTCTAGTGACAATGTTGAGATCTGTAACGAGATGAGCACCCTAGGACTGCATTCTGCTGATGGATTATCGTGCAATGGGAAGAATGATGTAACCATATCATCAGAAAGAACTGTTAATAATCCCATCCCTAGTTCCACACTAAAGGATGTGCAAGACATGCATCAAAATATTAATGATAAATTGTTTGAAAATAATTATCATGAAAGAAATTTCTTTCACAATGTTGGAAATCCAAAAATAGCTCTTTATTGCTCAAAGTCTGCTCCTATTGAGCCCGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATAGCAATGATGAGGTCTGCATCTCAACATTCAAGGGTAGCCACTAATGCCTATCTTCGGAAGGATCATGCTTCTGCCAAGTATCATTCATCAAGGGCTCAAGAACAATGGCTAGCTGCAAAAATGTTAAATGCTAAGGCAGCCAATGAAATTTTACAAACAAGGAATAGTGAAAATGGGCTCTGGAAGTTGGACTTACATGGGCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGATCACTTGCTGAAAATCGAAACTTGGAATGCCTCCAATCGGTCGTTGTCGCCAAAGAAAGCTGAAAGGAAGGGTTTCTATCGTGTTTCATCCCTTGAGTATCTTAGTTGTCTGGGCGTAAAGTTGGACAAAGAATTACAATCACCATTACCTAGGCATAGGCCGACATCATTGGAAGTCATAACAGGAATAGGTAAACATAGCAGGGGGGAGGCTGCTCTACCAAAGGCCGTGACAAGTTTTCTTAGTGAAAATGGGTACCGTTTTGAACAGTTGAGGCCTGGAACGATCAGCGTTCGACCGAAGTTTCGTAGGTAA

Protein sequence

MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTAHSFLPPCENVHRVNGRSGRSSQENFGAEKTILGNSSIRSSKKLVEESTDVLAFWKLKELHSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKSSGWEEFNLKQQNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSSSSSPLPSADSLTLPENYGAKKILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERTVNNPIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYLSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKGFYRVSSLEYLSCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPGTISVRPKFRR

Homology

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BLAST of CmaCh17G013380 vs. TrEMBL
Match: A0A0A0KA90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374690 PE=4 SV=1)

HSP 1 Score: 865.9 bits (2236), Expect = 2.7e-248
Identity = 457/610 (74.92%), Postives = 500/610 (81.97%), Query Frame = 1


Query: 1   MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTAHSFLPPCENVHRVNGRSGRS-- 60
           MSW RGKS GWAA NLKQQN+GLQDE+D DPFPPMST  S LPP EN+  VNG SG+S  
Sbjct: 1   MSWVRGKSSGWAAFNLKQQNNGLQDEVDRDPFPPMSTTLSSLPPRENLRGVNGHSGKSFS 60

Query: 61  ---------------------SQENFGAEKTILGNSSIRSSKKLVEESTDVLAFWKLKEL 120
                                +  NFGA+KTILG ++I+S KKLVEE+ DVL+FWKLKEL
Sbjct: 61  LAPIPSADSPTLPVKFGAKKTTLGNFGAKKTILGGTNIQSGKKLVEETNDVLSFWKLKEL 120

Query: 121 HSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKS 180
           H WADISLI+DIMEAVNN+FNEAS LL TMVSSDN EINN+MSTLGLHSSND+  + GKS
Sbjct: 121 HPWADISLIMDIMEAVNNDFNEASTLLNTMVSSDNLEINNKMSTLGLHSSNDLLWMAGKS 180

Query: 181 SGWEEFNLKQQNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSSSSSPLPSAD 240
            GWEEFNLKQ N+G QD +D + FPPM ++ SSLPP ENLHGV GR G S +S PLPS D
Sbjct: 181 PGWEEFNLKQHNKGLQDEMDLEAFPPMLTNRSSLPPYENLHGVYGRSGRSFASEPLPSVD 240

Query: 241 SLTLPENYGAKK-ILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDN 300
           SLT PENYGAK  I  DS+IQ+G+KVVEE TDVLAFWKLKE+H+WADFSLIVDIM+AV+N
Sbjct: 241 SLTSPENYGAKNTIADDSSIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDIMDAVNN 300

Query: 301 NFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERTVNNPIPSSTL 360
           NF+EAST L  MVSSDN EI NE+STLGLHSA+ L CNG NDV+I+SER +N PI SST+
Sbjct: 301 NFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGNNDVSIASERMINAPILSSTV 360

Query: 361 KDVQDMHQNIN------DKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYL 420
           K VQ +HQN N       KLF N+Y ERN FHN GN KIAL CSKS PIEPEWEEDDIYL
Sbjct: 361 KAVQGIHQNNNTSREDYTKLFANDYFERNSFHNTGNSKIALGCSKSVPIEPEWEEDDIYL 420

Query: 421 SHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQT 480
           SHRKDAIAMMRSASQHSR ATNAY RKDHASAKYHSSRA+EQWLAAKMLN KAANEILQT
Sbjct: 421 SHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAEEQWLAAKMLNDKAANEILQT 480

Query: 481 RNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKGFYRVSSLEYL 540
           RNS+NGLWKLDLHGLHAAEAVQAL DHLLKIET NASNRSLSPKKAERKGF R SSLEYL
Sbjct: 481 RNSKNGLWKLDLHGLHAAEAVQALHDHLLKIETQNASNRSLSPKKAERKGFQRASSLEYL 540

Query: 541 SCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPG 581
           SC+  KLDKE  SP  RHRPTSLEVITGIGKHS+GEAALPKAV SFL+ENGYRFEQ RPG
Sbjct: 541 SCMESKLDKE--SPSSRHRPTSLEVITGIGKHSKGEAALPKAVASFLTENGYRFEQTRPG 600

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BLAST of CmaCh17G013380 vs. TrEMBL
Match: F6HGK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0130g00370 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.3e-100
Identity = 229/443 (51.69%), Postives = 290/443 (65.46%), Query Frame = 1


Query: 150 VSLVRGKSSGWEEFNLKQ-QNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSS 209
           +S   GKS GW  F+LKQ Q +G +  +D +P+PP+PSS +SL P  N    NG  G S 
Sbjct: 1   MSSASGKSPGWAAFDLKQRQKQGLEPELDKEPYPPIPSSFTSLRPCRN-SASNGCSGRSF 60

Query: 210 SSSPLPSADSLTLPENYGAKKIL--GDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSL 269
           SS  +PS +  TL EN   KK +  G+S  +   KV E +  V+AF KLKEL++WAD SL
Sbjct: 61  SSLLVPSVNFPTLEENKDCKKPMQGGNSGNKQQTKVAEVSNLVIAFNKLKELYSWADNSL 120

Query: 270 IVDIMEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERT 329
           I DIM AVDN+ ++AST L  MVS+ + E   E S + L+S  G   N   +  + ++  
Sbjct: 121 IEDIMAAVDNDIDKASTLLGAMVSTGSFEENKETSIVELNSTSG---NPYENCKLQADNG 180

Query: 330 VNNPIPSSTLKDVQDMHQNINDKLFENN--------YHERNFFHNVGNPKIALYCSKSAP 389
           V   + + T+  + ++   I D L +NN           +N F +  +  + L   KS P
Sbjct: 181 VF--LGNGTV--LSELSSTIGDLLIDNNKGLTDECGSSGKNLFDDAADMTLILGRMKSIP 240

Query: 390 IEPEWEEDDIYLSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKM 449
           IEPEWEEDD+YLSHRKDAI  MRSASQHSR ATNA+LR DH SAK  S +A+++W+ A+ 
Sbjct: 241 IEPEWEEDDVYLSHRKDAIRFMRSASQHSRAATNAFLRGDHVSAKQFSLKAKDEWVKAER 300

Query: 450 LNAKAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAER 509
           LN+KAANEIL  RNS N LWKLDLHGLHAAEAVQALQ+HL KIET    NRS+SP +A+ 
Sbjct: 301 LNSKAANEILDIRNSNNDLWKLDLHGLHAAEAVQALQEHLWKIETQMPFNRSVSPNRAKT 360

Query: 510 K-GFYRVSSLEYLSCL-GVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSF 569
           K G  R  SLE  SC+   +LDK  Q  L R RPTSL+VITG G HSRG+AALP AV SF
Sbjct: 361 KVGILRSPSLESFSCVDNEELDK--QWTLSRQRPTSLQVITGRGNHSRGQAALPTAVRSF 420

Query: 570 LSENGYRFEQLRPGTISVRPKFR 580
           L+E+GYRFE+ RPG I+VRPKFR
Sbjct: 421 LNEHGYRFEEARPGVIAVRPKFR 433

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BLAST of CmaCh17G013380 vs. TrEMBL
Match: A0A061DK57_THECC (Smr (Small MutS Related) domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_001646 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.3e-92
Identity = 212/432 (49.07%), Postives = 266/432 (61.57%), Query Frame = 1


Query: 154 RGKSSGWEEFNLKQ-QNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSSSSSP 213
           +G+SSGW  F+LKQ Q +G     +  PFPPMP+SL ++ P  NL   N     S SS  
Sbjct: 18  KGESSGWSAFDLKQRQKQGLVPETEDDPFPPMPNSLPAICPCINLAKSNDLSARSFSSVL 77

Query: 214 LPSADSLTLPEN--YGAKKILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDI 273
            PS +  T  +N  Y     +G     +G KVVE+  + LA  KLKELH WA+ SLI D+
Sbjct: 78  KPSDNFPTSKQNKDYTKPINMGKPIENDGDKVVEQNNNNLALKKLKELHCWAENSLIEDL 137

Query: 274 MEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSA-DGLSCNGKNDVTISSERTVNN 333
           + A D + +EAS  L  M+S    E   E     + SA      N   D  IS+ +T   
Sbjct: 138 LLAADGDVHEASALLKGMMSISGTEDIKETKNNEMSSAISDFPGNAYCDREISTGKTAKL 197

Query: 334 PIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIY 393
              SS   + +D    + D       HE   F    N K+ L    S P EPEWEEDD+Y
Sbjct: 198 VCQSSKADEREDNLDKLTDM------HENKLFDGASNMKLILGQLTSIPFEPEWEEDDVY 257

Query: 394 LSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQ 453
           LSHRKDAI MMRSASQHSR A+NA+LR DH +A+ HS  A+E+WLAA+ LNAKAA+EIL+
Sbjct: 258 LSHRKDAIRMMRSASQHSRAASNAFLRGDHVAAQQHSQNAREEWLAAQRLNAKAASEILR 317

Query: 454 TRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKG-FYRVSSLE 513
            RNS+N LWKLDLHGLHAAEAVQAL +HL ++ET   + RS+SP + +        SS+E
Sbjct: 318 IRNSDNDLWKLDLHGLHAAEAVQALHEHLRRLETQVPAGRSVSPNRFKANNRIVHSSSVE 377

Query: 514 YLSCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLR 573
             S +  KLDK+  S   R RPTSL+VITG+G HSRG+AALP AV SFL ENGYRF++ R
Sbjct: 378 TFSSMD-KLDKQQTS--SRQRPTSLQVITGVGNHSRGQAALPAAVRSFLIENGYRFDEAR 437

Query: 574 PGTISVRPKFRR 581
           PG I+VRPKFRR
Sbjct: 438 PGLITVRPKFRR 440

[Close]

BLAST of CmaCh17G013380 vs. TrEMBL
Match: M5WI32_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006112mg PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 205/440 (46.59%), Postives = 273/440 (62.05%), Query Frame = 1


Query: 156 KSSGWEEFNLKQ-QNRGFQDRIDPKPFPPMPSSLSSLPPRENL---HGVNGRPGGSSSSS 215
           KS GW  F+LKQ Q +G + + D   FPP+ ++L SL P EN+   + ++GRP     S 
Sbjct: 7   KSGGWAAFDLKQRQKQGLEPQTDTDHFPPILTTLPSLHPCENVSRNNDLSGRP----FSC 66

Query: 216 PLPSADSLTLPENYGAKKIL--GDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVD 275
            L   D  T  EN   K+ L  GDS+   G  + +  +      K+ +L+ WAD SLI D
Sbjct: 67  VLHPVDFPTSTENRDGKRPLLYGDSS---GTSMEDNRSSKK---KIMDLYPWADDSLIED 126

Query: 276 IMEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERTVNN 335
           IM AV ++  +AST L  MVS  + E   E         D    N  +D+   S++T + 
Sbjct: 127 IMAAVGDDITKASTLLKAMVSPSSFEENKE--------TDISKINSNSDI-YQSDKTKHT 186

Query: 336 PIPSSTLKDVQDMHQNINDKLFENNY-----HE---RNFFHNVGNPKIALYCSKSAPIEP 395
             P  +  D+ D++      L ENN      H+   +N  ++    K+ L   +S P+EP
Sbjct: 187 SFPLESAADIADLNSTFEKCLEENNIELLNAHDFCGKNLPNDAATMKLTLGSLESVPVEP 246

Query: 396 EWEEDDIYLSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNA 455
           EWEEDD+YL HRKDA+ MMRSASQHS+ ATNA++R DH SA+ HS++A+E+WLAA+ LN 
Sbjct: 247 EWEEDDVYLRHRKDALRMMRSASQHSKAATNAFVRGDHFSAQRHSNKAREEWLAAESLNN 306

Query: 456 KAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAE-RKG 515
           KAA +IL  RNS+N +WKLDLHGLHA+EA+QAL++HL +IET   SN S+SP K    K 
Sbjct: 307 KAAKKILNIRNSKNDVWKLDLHGLHASEAIQALREHLQRIETKVLSNHSVSPNKVRMEKR 366

Query: 516 FYRVSSLEYLSCLGV-KLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSE 575
             R SSLE  +C+   KLD+  Q      RPTSL+VITGIG HSRG+AALP AV SFL++
Sbjct: 367 IIRSSSLESFNCMDTEKLDQ--QKAPSTQRPTSLQVITGIGNHSRGQAALPTAVGSFLND 425

Query: 576 NGYRFEQLRPGTISVRPKFR 580
           NGYRFE+LRPG I+VRPKFR
Sbjct: 427 NGYRFEELRPGVITVRPKFR 425

[Close]

BLAST of CmaCh17G013380 vs. TrEMBL
Match: A0A0D2TIK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048200 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.1e-85
Identity = 203/432 (46.99%), Postives = 264/432 (61.11%), Query Frame = 1


Query: 154 RGKSSGWEEFNLKQ-QNRGFQDRIDPKPFPPMP-SSLSSLPPRENLHGVNGRPGGSSSSS 213
           + KSSGW  F+LKQ Q +      +  PFPP+  ++L   P + N + ++ R   S SS 
Sbjct: 18  KDKSSGWTAFDLKQRQKQALVPETENDPFPPVAMAALHPCPSQTNCNDLSAR---SFSSV 77

Query: 214 PLPSADSLTLPENYGA-KKILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDI 273
             PS+D  TL +N  + K I     I N  K+     + LA  KLKE+H WA+ SLI DI
Sbjct: 78  LKPSSDFPTLKQNKNSIKSINVGKPIGNEDKIAGVNNNDLALKKLKEIHCWAENSLIEDI 137

Query: 274 MEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSA-DGLSCNGKNDVTISSERTVNN 333
           + A +N+ +EAS  L +M+   + E  ++     + SA      N   D+ + S +T ++
Sbjct: 138 LLATNNDIHEASALLKQMMPRSSTEEIDKAKNNEMGSAIANFPSNANCDICLPSGKTADH 197

Query: 334 PIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIY 393
              SS   + ++  + + D       HE   F +  N K+ L    S PIEPEWEEDD+Y
Sbjct: 198 VGQSSKANEREENLKILTD------VHENKLFDDHSNMKLILGQLTSIPIEPEWEEDDVY 257

Query: 394 LSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQ 453
           LSHRKDAI MMRSASQHSR ATNA+LR DH SA+ HS  A+E+WLAA+ LNAKAA EIL 
Sbjct: 258 LSHRKDAIRMMRSASQHSRAATNAFLRGDHFSAQQHSQNAREEWLAAQRLNAKAAREILS 317

Query: 454 TRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAE-RKGFYRVSSLE 513
            RNS+N LWKLDLHGLHAAEAVQAL +HL ++ET  +   S+SP   +   G  R SS+ 
Sbjct: 318 IRNSDNDLWKLDLHGLHAAEAVQALHEHLRRLETRVSGGCSVSPNGVKANNGIVRSSSVG 377

Query: 514 YLSCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLR 573
            +S +  KL K   S   R  P SLEVITG+G HSRG+AALP AV  FL ENGYRF++ R
Sbjct: 378 TISSMD-KLGKPQTS--SRQVPASLEVITGVGNHSRGQAALPTAVRGFLIENGYRFDETR 437

Query: 574 PGTISVRPKFRR 581
           PG I+VRPKFRR
Sbjct: 438 PGLITVRPKFRR 437

[Close]

BLAST of CmaCh17G013380 vs. TAIR10
Match: AT5G23520.1 (AT5G23520.1 smr (Small MutS Related) domain-containing protein)

HSP 1 Score: 279.3 bits (713), Expect = 5.6e-75
Identity = 187/449 (41.65%), Postives = 260/449 (57.91%), Query Frame = 1


Query: 150 VSLVRGKSSGWEEFNLKQ-QNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGR----- 209
           +S ++GKSSGW  F+LKQ Q +G +  ++  PFPP+ +S+++        GV GR     
Sbjct: 1   MSWMKGKSSGWTAFDLKQRQKQGLESEVEGDPFPPVSTSVNAS------FGVRGRLRRNH 60

Query: 210 -PGGSSSSSPL--PSA-DSLTLPENYGAKKILGDSTIQNGRKVVEETTDVLAFWKLKELH 269
            P   S SS L  PS   +LT  ++ G ++  G    +     +   +  LAF KLKE++
Sbjct: 61  EPSEKSFSSVLLPPSRFPALTENKDCGNQERGGCCRRKPDTLSLPVNSHDLAFTKLKEMN 120

Query: 270 TWADFSLIVDIMEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDV 329
           +WAD +LI D++ + +++F  A  FL  MVSS   +   E  T  +   +G S + +   
Sbjct: 121 SWADDNLIRDVLLSTEDDFEMALAFLKGMVSSGKED---EEPTSKI---EGYSSDNRRSE 180

Query: 330 TISSERTVNNPIPS---STLKDV--QDMHQNINDKLFENNYHERNFFHNVGNPKIALYCS 389
             + E+TV + +     ST +D    D+  +       N      F  ++      +   
Sbjct: 181 YRTFEKTVTSSVKMAARSTFEDAGKYDLENSDGSSFLVNASDNEKFPDDISELDSIIQRL 240

Query: 390 KSAPIEPEWEEDDIYLSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWL 449
           +S PIEPEWEEDD+YLSHRKDA+ +MRSAS HSR A NA+ R DHASAK HS +A+E WL
Sbjct: 241 QSIPIEPEWEEDDLYLSHRKDALKVMRSASNHSRAAQNAFQRYDHASAKQHSDKAREDWL 300

Query: 450 AAKMLNAKAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPK 509
           AA+ LNA+AA +I+   N +N +WKLDLHGLHA EAVQALQ+ L  IE     NRS+SP 
Sbjct: 301 AAEKLNAEAAKKIIGITNKDNDIWKLDLHGLHATEAVQALQERLQMIEGHFTVNRSVSPN 360

Query: 510 KAERK-GFYRVSSLEYLSCLGVKLDKE---LQSPLPRHRPTSLEVITGIGKHSRGEAALP 569
           +   K    R +S E       +LD+E    Q    R    SL+VITGIGKHSRG+A+LP
Sbjct: 361 RGRSKNAALRSASQEPFG----RLDEEGMHCQRTSSRELRNSLQVITGIGKHSRGQASLP 420

Query: 570 KAVTSFLSENGYRFEQLRPGTISVRPKFR 580
            AV +F  +N YRF++ RPG I+VRPKFR
Sbjct: 421 LAVKTFFEDNRYRFDETRPGVITVRPKFR 433

[Close]

BLAST of CmaCh17G013380 vs. NCBI nr
Match: gi|659100734|ref|XP_008451240.1| (PREDICTED: uncharacterized protein LOC103492590 [Cucumis melo])

HSP 1 Score: 868.6 bits (2243), Expect = 6.1e-249
Identity = 461/610 (75.57%), Postives = 498/610 (81.64%), Query Frame = 1


Query: 1   MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTAHSFLPPCENVHRVNGRSGRS-- 60
           MSW RGKS GWAA NLKQQN+G+QDE+D DPFPPMST  S LPP EN+  VNGRSGRS  
Sbjct: 1   MSWVRGKSSGWAAFNLKQQNNGIQDEVDGDPFPPMSTTLSSLPPRENLRGVNGRSGRSFS 60

Query: 61  ---------------------SQENFGAEKTILGNSSIRSSKKLVEESTDVLAFWKLKEL 120
                                +  NF A+KTILG S+I+S KK+VEE+ DVL+FWKLKEL
Sbjct: 61  FAPIPSADSPTLPGKCGAKKTTLGNFSAKKTILGASNIQSGKKMVEETNDVLSFWKLKEL 120

Query: 121 HSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKS 180
           H WADISLI+DIMEAVNN+FNEAS LL TMVSSDN EINNEMS LGLHSSND+S + GKS
Sbjct: 121 HPWADISLIMDIMEAVNNDFNEASTLLNTMVSSDNLEINNEMSNLGLHSSNDLSWMMGKS 180

Query: 181 SGWEEFNLKQQNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSSSSSPLPSAD 240
            GWEEFNL+Q NRG Q   DP+ FPPM ++  SLPP ENLHGV GR G S +S PLPSAD
Sbjct: 181 PGWEEFNLQQHNRGLQGEKDPEAFPPMLTNHPSLPPYENLHGVYGRLGRSFASEPLPSAD 240

Query: 241 SLTLPENYGAKKIL-GDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDN 300
           SLT P NYGAK  +  DS IQ+G+KVVEE TDVLAFWKLKE+H+WADFSLIVDIM+AV+N
Sbjct: 241 SLTSPGNYGAKNTIPDDSGIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDIMDAVNN 300

Query: 301 NFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERTVNNPIPSSTL 360
           NF+EAST L  MVSSDN EI NE+STLGLHSA+ L CNG NDV+ISSERT+N PI S TL
Sbjct: 301 NFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGDNDVSISSERTINGPILSPTL 360

Query: 361 KDVQDMHQNIND------KLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYL 420
           K  Q MHQN N       KLF N+Y ERNFF N GN KIAL CSKS PIEPEWEEDDIYL
Sbjct: 361 KAAQGMHQNDNTGGEDCTKLFVNDYFERNFFPNAGNSKIALGCSKSVPIEPEWEEDDIYL 420

Query: 421 SHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQT 480
           SHRKDAIAMMRSASQHSR ATNAY RKDHASAKYHSSRAQEQWLAAKMLN KAANEILQT
Sbjct: 421 SHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAQEQWLAAKMLNDKAANEILQT 480

Query: 481 RNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKGFYRVSSLEYL 540
           RNS+NGLWKLDLHGLHAAEAVQALQDHLLKIET NASNRSLSPKKAERKGF R SSLEYL
Sbjct: 481 RNSKNGLWKLDLHGLHAAEAVQALQDHLLKIETQNASNRSLSPKKAERKGFQRASSLEYL 540

Query: 541 SCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPG 581
           SC+  KLDKE  SP  RHRPTSLEVITGIGKHS+GEAALPKAVTSFL+ENGYRFEQ RPG
Sbjct: 541 SCMDAKLDKE--SPSSRHRPTSLEVITGIGKHSKGEAALPKAVTSFLTENGYRFEQTRPG 600

[Close]

BLAST of CmaCh17G013380 vs. NCBI nr
Match: gi|449462475|ref|XP_004148966.1| (PREDICTED: uncharacterized protein LOC101223137 [Cucumis sativus])

HSP 1 Score: 865.9 bits (2236), Expect = 3.9e-248
Identity = 457/610 (74.92%), Postives = 500/610 (81.97%), Query Frame = 1


Query: 1   MSWGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTAHSFLPPCENVHRVNGRSGRS-- 60
           MSW RGKS GWAA NLKQQN+GLQDE+D DPFPPMST  S LPP EN+  VNG SG+S  
Sbjct: 1   MSWVRGKSSGWAAFNLKQQNNGLQDEVDRDPFPPMSTTLSSLPPRENLRGVNGHSGKSFS 60

Query: 61  ---------------------SQENFGAEKTILGNSSIRSSKKLVEESTDVLAFWKLKEL 120
                                +  NFGA+KTILG ++I+S KKLVEE+ DVL+FWKLKEL
Sbjct: 61  LAPIPSADSPTLPVKFGAKKTTLGNFGAKKTILGGTNIQSGKKLVEETNDVLSFWKLKEL 120

Query: 121 HSWADISLIVDIMEAVNNNFNEASKLLKTMVSSDNFEINNEMSTLGLHSSNDVSLVRGKS 180
           H WADISLI+DIMEAVNN+FNEAS LL TMVSSDN EINN+MSTLGLHSSND+  + GKS
Sbjct: 121 HPWADISLIMDIMEAVNNDFNEASTLLNTMVSSDNLEINNKMSTLGLHSSNDLLWMAGKS 180

Query: 181 SGWEEFNLKQQNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSSSSSPLPSAD 240
            GWEEFNLKQ N+G QD +D + FPPM ++ SSLPP ENLHGV GR G S +S PLPS D
Sbjct: 181 PGWEEFNLKQHNKGLQDEMDLEAFPPMLTNRSSLPPYENLHGVYGRSGRSFASEPLPSVD 240

Query: 241 SLTLPENYGAKK-ILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDIMEAVDN 300
           SLT PENYGAK  I  DS+IQ+G+KVVEE TDVLAFWKLKE+H+WADFSLIVDIM+AV+N
Sbjct: 241 SLTSPENYGAKNTIADDSSIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDIMDAVNN 300

Query: 301 NFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERTVNNPIPSSTL 360
           NF+EAST L  MVSSDN EI NE+STLGLHSA+ L CNG NDV+I+SER +N PI SST+
Sbjct: 301 NFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGNNDVSIASERMINAPILSSTV 360

Query: 361 KDVQDMHQNIN------DKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIYL 420
           K VQ +HQN N       KLF N+Y ERN FHN GN KIAL CSKS PIEPEWEEDDIYL
Sbjct: 361 KAVQGIHQNNNTSREDYTKLFANDYFERNSFHNTGNSKIALGCSKSVPIEPEWEEDDIYL 420

Query: 421 SHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQT 480
           SHRKDAIAMMRSASQHSR ATNAY RKDHASAKYHSSRA+EQWLAAKMLN KAANEILQT
Sbjct: 421 SHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAEEQWLAAKMLNDKAANEILQT 480

Query: 481 RNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKGFYRVSSLEYL 540
           RNS+NGLWKLDLHGLHAAEAVQAL DHLLKIET NASNRSLSPKKAERKGF R SSLEYL
Sbjct: 481 RNSKNGLWKLDLHGLHAAEAVQALHDHLLKIETQNASNRSLSPKKAERKGFQRASSLEYL 540

Query: 541 SCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRPG 581
           SC+  KLDKE  SP  RHRPTSLEVITGIGKHS+GEAALPKAV SFL+ENGYRFEQ RPG
Sbjct: 541 SCMESKLDKE--SPSSRHRPTSLEVITGIGKHSKGEAALPKAVASFLTENGYRFEQTRPG 600

[Close]

BLAST of CmaCh17G013380 vs. NCBI nr
Match: gi|225463171|ref|XP_002267329.1| (PREDICTED: uncharacterized protein LOC100263151 [Vitis vinifera])

HSP 1 Score: 374.0 bits (959), Expect = 4.7e-100
Identity = 229/443 (51.69%), Postives = 290/443 (65.46%), Query Frame = 1


Query: 150 VSLVRGKSSGWEEFNLKQ-QNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSS 209
           +S   GKS GW  F+LKQ Q +G +  +D +P+PP+PSS +SL P  N    NG  G S 
Sbjct: 1   MSSASGKSPGWAAFDLKQRQKQGLEPELDKEPYPPIPSSFTSLRPCRN-SASNGCSGRSF 60

Query: 210 SSSPLPSADSLTLPENYGAKKIL--GDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSL 269
           SS  +PS +  TL EN   KK +  G+S  +   KV E +  V+AF KLKEL++WAD SL
Sbjct: 61  SSLLVPSVNFPTLEENKDCKKPMQGGNSGNKQQTKVAEVSNLVIAFNKLKELYSWADNSL 120

Query: 270 IVDIMEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERT 329
           I DIM AVDN+ ++AST L  MVS+ + E   E S + L+S  G   N   +  + ++  
Sbjct: 121 IEDIMAAVDNDIDKASTLLGAMVSTGSFEENKETSIVELNSTSG---NPYENCKLQADNG 180

Query: 330 VNNPIPSSTLKDVQDMHQNINDKLFENN--------YHERNFFHNVGNPKIALYCSKSAP 389
           V   + + T+  + ++   I D L +NN           +N F +  +  + L   KS P
Sbjct: 181 VF--LGNGTV--LSELSSTIGDLLIDNNKGLTDECGSSGKNLFDDAADMTLILGRMKSIP 240

Query: 390 IEPEWEEDDIYLSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKM 449
           IEPEWEEDD+YLSHRKDAI  MRSASQHSR ATNA+LR DH SAK  S +A+++W+ A+ 
Sbjct: 241 IEPEWEEDDVYLSHRKDAIRFMRSASQHSRAATNAFLRGDHVSAKQFSLKAKDEWVKAER 300

Query: 450 LNAKAANEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAER 509
           LN+KAANEIL  RNS N LWKLDLHGLHAAEAVQALQ+HL KIET    NRS+SP +A+ 
Sbjct: 301 LNSKAANEILDIRNSNNDLWKLDLHGLHAAEAVQALQEHLWKIETQMPFNRSVSPNRAKT 360

Query: 510 K-GFYRVSSLEYLSCL-GVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSF 569
           K G  R  SLE  SC+   +LDK  Q  L R RPTSL+VITG G HSRG+AALP AV SF
Sbjct: 361 KVGILRSPSLESFSCVDNEELDK--QWTLSRQRPTSLQVITGRGNHSRGQAALPTAVRSF 420

Query: 570 LSENGYRFEQLRPGTISVRPKFR 580
           L+E+GYRFE+ RPG I+VRPKFR
Sbjct: 421 LNEHGYRFEEARPGVIAVRPKFR 433

[Close]

BLAST of CmaCh17G013380 vs. NCBI nr
Match: gi|590709627|ref|XP_007048605.1| (Smr (Small MutS Related) domain-containing protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 347.4 bits (890), Expect = 4.7e-92
Identity = 212/432 (49.07%), Postives = 266/432 (61.57%), Query Frame = 1


Query: 154 RGKSSGWEEFNLKQ-QNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSSSSSP 213
           +G+SSGW  F+LKQ Q +G     +  PFPPMP+SL ++ P  NL   N     S SS  
Sbjct: 18  KGESSGWSAFDLKQRQKQGLVPETEDDPFPPMPNSLPAICPCINLAKSNDLSARSFSSVL 77

Query: 214 LPSADSLTLPEN--YGAKKILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDI 273
            PS +  T  +N  Y     +G     +G KVVE+  + LA  KLKELH WA+ SLI D+
Sbjct: 78  KPSDNFPTSKQNKDYTKPINMGKPIENDGDKVVEQNNNNLALKKLKELHCWAENSLIEDL 137

Query: 274 MEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSA-DGLSCNGKNDVTISSERTVNN 333
           + A D + +EAS  L  M+S    E   E     + SA      N   D  IS+ +T   
Sbjct: 138 LLAADGDVHEASALLKGMMSISGTEDIKETKNNEMSSAISDFPGNAYCDREISTGKTAKL 197

Query: 334 PIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIY 393
              SS   + +D    + D       HE   F    N K+ L    S P EPEWEEDD+Y
Sbjct: 198 VCQSSKADEREDNLDKLTDM------HENKLFDGASNMKLILGQLTSIPFEPEWEEDDVY 257

Query: 394 LSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQ 453
           LSHRKDAI MMRSASQHSR A+NA+LR DH +A+ HS  A+E+WLAA+ LNAKAA+EIL+
Sbjct: 258 LSHRKDAIRMMRSASQHSRAASNAFLRGDHVAAQQHSQNAREEWLAAQRLNAKAASEILR 317

Query: 454 TRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKG-FYRVSSLE 513
            RNS+N LWKLDLHGLHAAEAVQAL +HL ++ET   + RS+SP + +        SS+E
Sbjct: 318 IRNSDNDLWKLDLHGLHAAEAVQALHEHLRRLETQVPAGRSVSPNRFKANNRIVHSSSVE 377

Query: 514 YLSCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLR 573
             S +  KLDK+  S   R RPTSL+VITG+G HSRG+AALP AV SFL ENGYRF++ R
Sbjct: 378 TFSSMD-KLDKQQTS--SRQRPTSLQVITGVGNHSRGQAALPAAVRSFLIENGYRFDEAR 437

Query: 574 PGTISVRPKFRR 581
           PG I+VRPKFRR
Sbjct: 438 PGLITVRPKFRR 440

[Close]

BLAST of CmaCh17G013380 vs. NCBI nr
Match: gi|470132710|ref|XP_004302219.1| (PREDICTED: uncharacterized protein LOC101307600 [Fragaria vesca subsp. vesca])

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 200/430 (46.51%), Postives = 270/430 (62.79%), Query Frame = 1


Query: 150 VSLVRGKSSGWEEFNLKQQNRGFQDRIDPKPFPPMPSSLSSLPPRENLHGVNGRPGGSSS 209
           +S  + KS GW  F+LKQ+ +G   +ID  PFPP+ S++ SL P    +  +  P    S
Sbjct: 1   MSQQQAKSHGWAAFDLKQRQKGRAPQIDEDPFPPIVSTVKSLHPTVLRN--DEAPRKPFS 60

Query: 210 SSPLPSADSLTLPENYGAKKILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVD 269
           S  LPS D  +L EN   ++ L D         VE+    +   K+K+ ++WAD SL+ D
Sbjct: 61  SVFLPSVDVSSLAENRNGERSLLDGNSSRKHTPVEDQRSSIK--KIKDHYSWADDSLVED 120

Query: 270 IMEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERTVNN 329
           IM AVDN+   AS  L  MVS    E+  E S  G+ S+   S + K     SSE   + 
Sbjct: 121 IMAAVDNDITNASNLLKAMVSPSRSEVNKETSISGVDSSTDASLSDK---CFSSESAADI 180

Query: 330 PIPSSTLKDVQDMHQNINDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWEEDDIY 389
              SST++    + +N      +N+ + +   ++ GN K+     +S PIEPEWEEDD+Y
Sbjct: 181 AELSSTIEKC--LEENNIKWSNDNDLYGQKLSNDAGNVKLTTSSLESVPIEPEWEEDDVY 240

Query: 390 LSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAANEILQ 449
           L  RKDA+ MMRSASQHS+ A NA+ R DH SA+ +S +A+E+WLAA+ LN +AA EIL 
Sbjct: 241 LRIRKDALRMMRSASQHSKAAANAFGRGDHYSAQQYSIKAREEWLAAESLNNRAAKEILS 300

Query: 450 TRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKGFYRVSSLEY 509
            RNS+N +WKLDLHGLHA+EA++ALQ+HL KIE    SN S  P +A+ +   + SS+E 
Sbjct: 301 IRNSKNDVWKLDLHGLHASEAIRALQEHLEKIERKILSNHSALPNRAKMESNIQHSSVES 360

Query: 510 LSCLGVKLDKELQSPLPRHRPTSLEVITGIGKHSRGEAALPKAVTSFLSENGYRFEQLRP 569
            SC   ++ ++LQ  + R RPTSL+VITGIG HSRG+AALP AV SFLSENGYRFE+LRP
Sbjct: 361 FSCTDTEIVEQLQ--VSRQRPTSLQVITGIGNHSRGQAALPTAVRSFLSENGYRFEELRP 419

Query: 570 GTISVRPKFR 580
           G I+VRPKFR
Sbjct: 421 GAITVRPKFR 419

The following BLAST results are available for this feature:

BLAST of CmaCh17G013380 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G013380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA90_CUCSA	2.7e-248	74.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374690 PE=4 SV=1	[more]
F6HGK1_VITVI	3.3e-100	51.69	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0130g00370 PE=4 SV=...	[more]
A0A061DK57_THECC	3.3e-92	49.07	Smr (Small MutS Related) domain-containing protein, putative isoform 1 OS=Theobr...	[more]
M5WI32_PRUPE	4.6e-86	46.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006112mg PE=4 SV=1	[more]
A0A0D2TIK4_GOSRA	5.1e-85	46.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048200 PE=4 SV=1	[more]

BLAST of CmaCh17G013380 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23520.1	5.6e-75	41.65	smr (Small MutS Related) domain-containing protein	[more]

BLAST of CmaCh17G013380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100734\|ref\|XP_008451240.1\|	6.1e-249	75.57	PREDICTED: uncharacterized protein LOC103492590 [Cucumis melo]	[more]
gi\|449462475\|ref\|XP_004148966.1\|	3.9e-248	74.92	PREDICTED: uncharacterized protein LOC101223137 [Cucumis sativus]	[more]
gi\|225463171\|ref\|XP_002267329.1\|	4.7e-100	51.69	PREDICTED: uncharacterized protein LOC100263151 [Vitis vinifera]	[more]
gi\|590709627\|ref\|XP_007048605.1\|	4.7e-92	49.07	Smr (Small MutS Related) domain-containing protein, putative isoform 1 [Theobrom...	[more]
gi\|470132710\|ref\|XP_004302219.1\|	1.4e-88	46.51	PREDICTED: uncharacterized protein LOC101307600 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002625	Smr_dom
IPR013899	DUF1771

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G013380.1	CmaCh17G013380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	PFAM	PF01713	Smr	coord: 460..560 score: 2.
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 457..577 score: 1.
IPR002625	Smr domain	PROFILE	PS50828	SMR	coord: 460..577 score: 18
IPR002625	Smr domain	unknown	SSF160443	SMR domain-like	coord: 526..575 score: 1.5
IPR013899	Domain of unknown function DUF1771	PFAM	PF08590	DUF1771	coord: 389..452 score: 1.8
IPR013899	Domain of unknown function DUF1771	SMART	SM01162	DUF1771_2	coord: 388..453 score: 1.6
None	No IPR available	PANTHER	PTHR13308	UNCHARACTERIZED	coord: 533..580 score: 2.9E-66coord: 339..498 score: 2.9E-66coord: 63..132 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G013380	Cucsa.388390	Cucumber (Gy14) v1	cgycmaB1077
CmaCh17G013380	Cla014840	Watermelon (97103) v1	cmawmB331
CmaCh17G013380	Csa7G374690	Cucumber (Chinese Long) v2	cmacuB384
CmaCh17G013380	MELO3C015720	Melon (DHL92) v3.5.1	cmameB322
CmaCh17G013380	CSPI07G15450	Wild cucumber (PI 183967)	cmacpiB388
CmaCh17G013380	CmoCh17G013030	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G013380	Lsi02G022020	Bottle gourd (USVL1VR-Ls)	cmalsiB346
CmaCh17G013380	Cp4.1LG12g10490	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G013380	MELO3C015720.2	Melon (DHL92) v3.6.1	cmamedB374
CmaCh17G013380	CsaV3_7G027220	Cucumber (Chinese Long) v3	cmacucB0457
CmaCh17G013380	Cla97C09G170460	Watermelon (97103) v2	cmawmbB390
CmaCh17G013380	Bhi09G000976	Wax gourd	cmawgoB0493
CmaCh17G013380	CsGy7G013940	Cucumber (Gy14) v2	cgybcmaB920
CmaCh17G013380	Carg11515	Silver-seed gourd	carcmaB0020

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G013380	Silver-seed gourd	carcmaB0104
CmaCh17G013380	Cucurbita maxima (Rimu)	cmacmaB374
CmaCh17G013380	Cucurbita moschata (Rifu)	cmacmoB366
CmaCh17G013380	Watermelon (Charleston Gray)	cmawcgB309
CmaCh17G013380	Cucurbita pepo (Zucchini)	cmacpeB392