Cp4.1LG12g08040 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g08040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein SYS1 like
LocationCp4.1LG12 : 6616313 .. 6619031 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAATGGAAACTACGATTTTACATTACAATTGTAGCGCATCTGGACGAAAGAATTTTCATCACAAGCGGCACGGACACGACCGAGCTATCAGAAGAAGAGAAGGGTGAAGGAACTTTGTCCGGAATCCTGAATTTTGCTGCCGGGTGTTTCAATTTGTCTCATCTCGATCTCAAGATTGATGCCTTTATGTTTCAGACTTGATCTAATTCTTATTTTCTGGTTAGACGGCATTGCGATGCGTTCGTTGTGTTAGCGAATTCGGATTTATTCGGTTTCTGGGGTTGGATTCGTGAGGGAATTGTGATTTGTTTCTCTCTTTGATTTTGAATCATCTGTAGTTATATGCTGTTGTGATTTTAGTATGCGTGGATTTAAGATTTGCTTGATTCAGATCGAATGAAACGAGATCGTTGAATTCTCGTGCCAGAGTTAGCGGGAGGATTCTTGATTTTAGGGTTTTTTTTTTTTAACGAATGGATGTACAGCTTCACGAAGAGAAATAGGGATCTCTTGAATTTCACTGTTAATTCGGGAGTGTGAAAGCGATAGATAGCGTAGAGAACGCTTTAACCATTGGGAAATCGTTTGTAATTTGTATTTCAGTTATACTGAAAAAAGTTGGGGTTCTGGTCAATTTAGGTTAGAGCATACTAATTGAGAAGGAGCTAGAATCGACTGACTGTTGGAGTCATGTTCTATGGTGCAGTTGTATGGGACCCTTGGCTCATCGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTCACTCTTGGTATATTGATCGCGACTCTAGTCGGTACACGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTGCTGGGTAAGAAAACTGTTTTAGCTTTCATCCCCATAATGTTTGGTATTATGTTTATTTACAATGCATGGTTAGGAATAGTTGATAAATCTCAAACGTGTTTGTCTACCCAGCTTTTATTTATTAAAGGTTAAATATACTTAGCTGCATGTTAATATAACATTACCCTTGGTTTGGAGAAGTTGTAGTTTATGGAGCCTTTGTGTGAGATCCCACTTTGTTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCATTTTAAAATCTTGAGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATTTGCTACAGATGGGCTTGGGCCGTTACACTTTGTTAGATTATTTAGATATTGAATAGAATAATCACCCTCGCTGAAATGGTTTTGATTGTTAACCATGAAAATGGCTTGTTTTGAATGTCATATTAATGTTTGCTTTTTTATCTCTACATTATGTAATGAGGCAATTTTTGTGGTAAACTATAACTGCGGATAACTCTTTGGTGTCCGAAGTTTGTTTCTTAATGGTTTGTAGTATCCTATTTGTTGTTCTGTCAGCAATTGATGTGAATTTCAATTAAGGTCCATGCGTATGTACTAGCTGGTTAGCTACTTTTTTTTCTTGATTTCCCATCTCCTAAATCCCTAGTAGCCGATTTGGAGAAATATGTTGTTATTTCCCTTTAAATCGTAGTCCGTTACTATCATAGAAATTCACATGTTCAACATTTTGGGTTTCTTAGGTCTAATTGTTATAATTTCTATTTAAATTGCTGACGATCAACCATACATATGGAAAATCTACGAACGGAGAATGCGTTGTTTTGAATATGTACGCAGTGGATGGTGTCATGCTTTTTATTTCAATTTCTGGGCAGATGCTGGCAGTTTTCCTTCCTTGGATTTTTCGTTTAGAACGTGTAGGCGATGGATTGGGGGCCGGGGGTGGTTGAAGGATAGCAACATAGTTTTGGAGCACTACCAACTAATAGATATTGTTTCTGTTAAATGTTTCCCTGAGCAGCACTCTATAGTGTTTGTTTATCTTTTTTTCTTCGTTTTTCATATTGTTTATACAAAACTCGTGTCAGCTGCTCTCACCATTACATTTTTTCTTGTCATGCAGAGCAGTATATCTGATTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATACTCCACCTTTTCATCTGTATCGTTTATGGAGGGTGGCCGTCCTCAATGACATGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAGTAAGGCTTCTTTCCTCGAGGAAATTAACAAATAATCTTCTTTGACATTCATATTGTTGGAATTCACAATTCATAGTACTAACAAACATGACTGCCAAAACACAGCATGCTAGTACAAAATGTTAATTCATGTTAGCCTCTATTATTTTACTCCATCCTATGCTAGGCTTTGCAGTTGAGTTATCATGCTCTGATTTGTACACCAAATGGTTACTGTTTAGTTTTTGGGAAAAGATGGTCCTCTTGTTTAAGATCACTGTGCATATTTTGGTGCAGATGTCTGAGCAAGTAACAGTCAAATTGCAAGAACCACCTCTTCATGTGTGTGATTTTCTGGTGGCCTATCTTATTAAATTTGCGTAGCTAGTGGATAAAGCTGATGAAAACCCAGATCAAGTTAGCATCAAGGAAGAGGAACTGTTTTGA

mRNA sequence

AGTAATGGAAACTACGATTTTACATTACAATTGTAGCGCATCTGGACGAAAGAATTTTCATCACAAGCGGCACGGACACGACCGAGCTATCAGAAGAAGAGAAGGGTGAAGGAACTTTGTCCGGAATCCTGAATTTTGCTGCCGGGTGTTTCAATTTGTCTCATCTCGATCTCAAGATTGATGCCTTTATGTTTCAGACTTGATCTAATTCTTATTTTCTGGTTAGACGGCATTGCGATGCGTTCGTTGTGTTAGCGAATTCGGATTTATTCGGTTTCTGGGGTTGGATTCGTGAGGGAATTGTGATTTGTTTCTCTCTTTGATTTTGAATCATCTGTAGTTATATGCTGTTGTGATTTTAGTATGCGTGGATTTAAGATTTGCTTGATTCAGATCGAATGAAACGAGATCGTTGAATTCTCGTGCCAGAGTTAGCGGGAGGATTCTTGATTTTAGGGTTTTTTTTTTTTAACGAATGGATGTACAGCTTCACGAAGAGAAATAGGGATCTCTTGAATTTCACTGTTAATTCGGGAGTGTGAAAGCGATAGATAGCGTAGAGAACGCTTTAACCATTGGGAAATCGTTTGTAATTTGTATTTCAGTTATACTGAAAAAAGTTGGGGTTCTGGTCAATTTAGGTTAGAGCATACTAATTGAGAAGGAGCTAGAATCGACTGACTGTTGGAGTCATGTTCTATGGTGCAGTTGTATGGGACCCTTGGCTCATCGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTCACTCTTGGTATATTGATCGCGACTCTAGTCGGTACACGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTGCTGGAGCAGTATATCTGATTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATACTCCACCTTTTCATCTGTATCGTTTATGGAGGGTGGCCGTCCTCAATGACATGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAGCTTTGCAGTTGAGTTATCATGCTCTGATTTGTACACCAAATGGTTACTGTTTAGTTTTTGGGAAAAGATGGTCCTCTTGTTTAAGATCACTGTGCATATTTTGGTGCAGATGTCTGAGCAACTAGTGGATAAAGCTGATGAAAACCCAGATCAAGTTAGCATCAAGGAAGAGGAACTGTTTTGA

Coding sequence (CDS)

ATGTTCTATGGTGCAGTTGTATGGGACCCTTGGCTCATCGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTCACTCTTGGTATATTGATCGCGACTCTAGTCGGTACACGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTGCTGGAGCAGTATATCTGATTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATACTCCACCTTTTCATCTGTATCGTTTATGGAGGGTGGCCGTCCTCAATGACATGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAGCTTTGCAGTTGAGTTATCATGCTCTGATTTGTACACCAAATGGTTACTGTTTAGTTTTTGGGAAAAGATGGTCCTCTTGTTTAAGATCACTGTGCATATTTTGGTGCAGATGTCTGAGCAACTAGTGGATAAAGCTGATGAAAACCCAGATCAAGTTAGCATCAAGGAAGAGGAACTGTTTTGA

Protein sequence

MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSSFAVELSCSDLYTKWLLFSFWEKMVLLFKITVHILVQMSEQLVDKADENPDQVSIKEEELF
Homology
[Close]
BLAST of Cp4.1LG12g08040 vs. Swiss-Prot
Match: SYS1_DICDI (Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.6e-27
Identity = 59/147 (40.14%), Postives = 97/147 (65.99%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFY    WDP LI+ QI+ +QCLYY+ L  ++  L     S +SL   F+Y +I   + +
Sbjct: 1   MFYKYNAWDPKLIIGQILSIQCLYYILLAGILYLLDSMFSSSLSLEQMFEYQSINTHSQS 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           G  V+ +FL+++L G+  L Y++ER+KKCLD +AT+  +H  I  +  G+P ++ WW + 
Sbjct: 61  GRVVMTAFLINSLFGSFCLKYIVERSKKCLDHSATVTFIHFIIVWIVSGFPKTVVWWAIQ 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITR 148
             G+V+M+++GEYLC+++EL +IP+ R
Sbjct: 121 LIGMVIMAMIGEYLCMRKELMDIPLQR 147

[Close]
BLAST of Cp4.1LG12g08040 vs. Swiss-Prot
Match: SYS1_NEMVE (Protein SYS1 homolog OS=Nematostella vectensis GN=sys1 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.3e-25
Identity = 56/140 (40.00%), Postives = 96/140 (68.57%), Query Frame = 1 

Query: 7   VWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGWCVIA 66
           VWDP LI++QI+ +QC +Y++LG+ +  +     S  SL  FF Y  + +S+  G  ++ 
Sbjct: 9   VWDPVLIISQIIAIQCTFYISLGVWVLIVDYWSGSIHSLDQFFAYKELDISSLKGKLLMI 68

Query: 67  SFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVNGTGLVV 126
           +F L++L GA+ L ++++RAK+CLDF  T +I+HL  C +Y G+P S TWW++N   L +
Sbjct: 69  AFCLNSLTGAMALWFIVKRAKQCLDFTTTAHIVHLVFCCIYAGFPFSWTWWLLNIICLAL 128

Query: 127 MSLLGEYLCIKRELREIPIT 147
           M+++GE++C+K EL+ I ++
Sbjct: 129 MAVIGEFVCMKTELKAIKVS 148

[Close]
BLAST of Cp4.1LG12g08040 vs. Swiss-Prot
Match: SYS1_HUMAN (Protein SYS1 homolog OS=Homo sapiens GN=SYS1 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 3   YGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGW 62
           + + VWDP LI++QIV +Q +YY +LG+ +A + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGG-WPSSMTWWVVNG 122
             + SF+L+AL  A+ L+Y I R K+CLDF  T++  HL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPI 146
             + +M+++GEYLC++ EL+EIP+
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPL 148

[Close]
BLAST of Cp4.1LG12g08040 vs. Swiss-Prot
Match: SYS1_PAPAN (Protein SYS1 homolog OS=Papio anubis GN=SYS1 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 3   YGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGW 62
           + + VWDP LI++QIV +Q +YY +LG+ +A + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGG-WPSSMTWWVVNG 122
             + SF+L+AL  A+ L+Y I R K+CLDF  T++  HL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPI 146
             + +M+++GEYLC++ EL+EIP+
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPL 148

[Close]
BLAST of Cp4.1LG12g08040 vs. Swiss-Prot
Match: SYS1_PONAB (Protein SYS1 homolog OS=Pongo abelii GN=SYS1 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 3   YGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGW 62
           + + VWDP LI++QIV +Q +YY +LG+ +A + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGG-WPSSMTWWVVNG 122
             + SF+L+AL  A+ L+Y I R K+CLDF  T++  HL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPI 146
             + +M+++GEYLC++ EL+EIP+
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPL 148

[Close]
BLAST of Cp4.1LG12g08040 vs. TrEMBL
Match: A0A0A0KC23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446680 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.3e-74
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQC YYLTLGIL+ATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YL+YLIERAKKCLDFAATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRS+
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. TrEMBL
Match: A0A068TRT1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022044001 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.7e-67
Identity = 126/151 (83.44%), Postives = 143/151 (94.70%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLG+ +A LVGTRVSR+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGLFLAILVGTRVSRMSLVYFFDYATVTASTVT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASF+LS+LAGA +L+YL+ERAKKCLDF+ATLYI+H+FICI+YGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFILSSLAGAGFLVYLVERAKKCLDFSATLYIIHIFICIIYGGWPSSITWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
            TGL VM+LLGEYLCI+RELREIPITR RS+
Sbjct: 121 VTGLAVMALLGEYLCIRRELREIPITRYRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. TrEMBL
Match: A0A067KY88_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06256 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.9e-67
Identity = 125/151 (82.78%), Postives = 142/151 (94.04%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLG+ ++ LVGTRVSR+SLVYFFD+  +T ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGLFLSILVGTRVSRLSLVYFFDFVALTTSTVT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL S++AGA +++YLIERAKKCLDF+ATLYI+HLFICI+YGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFLFSSIAGAGFMLYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSITWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           GTGL VM+LLGEYLCIKRELREIPITRLRS+
Sbjct: 121 GTGLAVMALLGEYLCIKRELREIPITRLRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. TrEMBL
Match: A0A061GBF2_THECC (Structural molecules OS=Theobroma cacao GN=TCM_028683 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.1e-67
Identity = 126/151 (83.44%), Postives = 143/151 (94.70%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYL+LG+ ++ LVGTRVSR+SLVYFFD+AT+T ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLSLGVFLSFLVGTRVSRMSLVYFFDFATVTTSTVT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLS++AGA YL+YLIERAKKCLDF+ATLYI+HLFICIVYGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFLLSSIAGAGYLLYLIERAKKCLDFSATLYIIHLFICIVYGGWPSSVTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           G G+ VM+LLGEYLCI+RELREIPITR RS+
Sbjct: 121 GIGVAVMALLGEYLCIRRELREIPITRYRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. TrEMBL
Match: A0A0D2T4C4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G077000 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-66
Identity = 124/151 (82.12%), Postives = 143/151 (94.70%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLG+ ++ LVG RVSR+SLVYFFD+A++T ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGVFLSFLVGIRVSRMSLVYFFDFASVTTSTVT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLS++AGA Y++YLIERAKKCLDF+ATLYI+HLFICI+YGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFLLSSIAGAGYMLYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSITWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           GTG+ VM+LLGEYLCI+RELREIPITR RS+
Sbjct: 121 GTGVAVMALLGEYLCIRRELREIPITRYRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. TAIR10
Match: AT1G79990.1 (AT1G79990.1 structural molecules)

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-62
Identity = 112/151 (74.17%), Postives = 128/151 (84.77%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GW VIASFL S+LAGAVY+I+L+ERA+KCLDF+ATLYI+HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           GTGL VM+LL EYLCIKRE REIP+ R  S+
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. NCBI nr
Match: gi|778729275|ref|XP_011659561.1| (PREDICTED: protein SYS1 homolog [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.0e-73
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQC YYLTLGIL+ATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YL+YLIERAKKCLDFAATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRS+
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. NCBI nr
Match: gi|659124402|ref|XP_008462142.1| (PREDICTED: protein SYS1 homolog [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 5.2e-73
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI +ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YL+YLIERAKKCLDFAATLYI HLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRS+
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. NCBI nr
Match: gi|1012230984|ref|XP_015938373.1| (PREDICTED: protein SYS1 homolog [Arachis duranensis])

HSP 1 Score: 266.2 bits (679), Expect = 5.0e-68
Identity = 126/151 (83.44%), Postives = 144/151 (95.36%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYY+TLGIL++ LVGTRVSR+SLVYFFDYATIT ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYITLGILLSLLVGTRVSRLSLVYFFDYATITTSTVT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIA+ L+S++AGA+Y++YLIERAKKCLDF+ATLYI+HLFICIVYGGWPSS+TWW+VN
Sbjct: 61  GWCVIAAILISSVAGAIYMLYLIERAKKCLDFSATLYIIHLFICIVYGGWPSSITWWIVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
           GTGL  M+LLGEYLCI+RELREIPITR RS+
Sbjct: 121 GTGLAAMALLGEYLCIRRELREIPITRYRSN 151

[Close]
BLAST of Cp4.1LG12g08040 vs. NCBI nr
Match: gi|698566175|ref|XP_009773436.1| (PREDICTED: protein SYS1 homolog isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 263.8 bits (673), Expect = 2.5e-67
Identity = 130/151 (86.09%), Postives = 141/151 (93.38%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLGI +A LVGTRVSR++LVYFFDYA +T ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGIFLAILVGTRVSRLNLVYFFDYAAVTASTVT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLS+LAGA  L+YLIERAKKCLDF+ATLYI+HLFICIVYGGWPSS+TWW+VN
Sbjct: 61  GWCVIASFLLSSLAGAGILLYLIERAKKCLDFSATLYIVHLFICIVYGGWPSSITWWIVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
            TGL VM+LLGEYLCIKRELREIPITR RSS
Sbjct: 121 VTGLAVMALLGEYLCIKRELREIPITRYRSS 151

[Close]
BLAST of Cp4.1LG12g08040 vs. NCBI nr
Match: gi|661898101|emb|CDO98068.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 263.8 bits (673), Expect = 2.5e-67
Identity = 126/151 (83.44%), Postives = 143/151 (94.70%), Query Frame = 1 

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLG+ +A LVGTRVSR+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGLFLAILVGTRVSRMSLVYFFDYATVTASTVT 60

Query: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASF+LS+LAGA +L+YL+ERAKKCLDF+ATLYI+H+FICI+YGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFILSSLAGAGFLVYLVERAKKCLDFSATLYIIHIFICIIYGGWPSSITWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSS 152
            TGL VM+LLGEYLCI+RELREIPITR RS+
Sbjct: 121 VTGLAVMALLGEYLCIRRELREIPITRYRSN 151

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g08040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYS1_DICDI9.6e-2740.14Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1[more]
SYS1_NEMVE5.3e-2540.00Protein SYS1 homolog OS=Nematostella vectensis GN=sys1 PE=3 SV=1[more]
SYS1_HUMAN1.7e-2342.36Protein SYS1 homolog OS=Homo sapiens GN=SYS1 PE=1 SV=1[more]
SYS1_PAPAN1.7e-2342.36Protein SYS1 homolog OS=Papio anubis GN=SYS1 PE=3 SV=1[more]
SYS1_PONAB1.7e-2342.36Protein SYS1 homolog OS=Pongo abelii GN=SYS1 PE=3 SV=1[more]
BLAST of Cp4.1LG12g08040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC23_CUCSA7.3e-7494.04Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446680 PE=4 SV=1[more]
A0A068TRT1_COFCA1.7e-6783.44Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022044001 PE=4 SV=1[more]
A0A067KY88_JATCU3.9e-6782.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06256 PE=4 SV=1[more]
A0A061GBF2_THECC5.1e-6783.44Structural molecules OS=Theobroma cacao GN=TCM_028683 PE=4 SV=1[more]
A0A0D2T4C4_GOSRA1.1e-6682.12Uncharacterized protein OS=Gossypium raimondii GN=B456_011G077000 PE=4 SV=1[more]
BLAST of Cp4.1LG12g08040 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79990.12.6e-6274.17 structural molecules[more]
BLAST of Cp4.1LG12g08040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778729275|ref|XP_011659561.1|1.0e-7394.04PREDICTED: protein SYS1 homolog [Cucumis sativus][more]
gi|659124402|ref|XP_008462142.1|5.2e-7394.04PREDICTED: protein SYS1 homolog [Cucumis melo][more]
gi|1012230984|ref|XP_015938373.1|5.0e-6883.44PREDICTED: protein SYS1 homolog [Arachis duranensis][more]
gi|698566175|ref|XP_009773436.1|2.5e-6786.09PREDICTED: protein SYS1 homolog isoform X1 [Nicotiana sylvestris][more]
gi|661898101|emb|CDO98068.1|2.5e-6783.44unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019185Integral_membrane_SYS1-rel
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g08040.1Cp4.1LG12g08040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019185Integral membrane protein SYS1-relatedPFAMPF09801SYS1coord: 5..144
score: 2.0
NoneNo IPR availablePANTHERPTHR12952SYS1coord: 1..151
score: 2.7
NoneNo IPR availablePANTHERPTHR12952:SF0PROTEIN SYS1 HOMOLOG-RELATEDcoord: 1..151
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g08040Cucsa.358970Cucumber (Gy14) v1cgycpeB0936
Cp4.1LG12g08040CmaCh17G008150Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g08040CmaCh08G006850Cucurbita maxima (Rimu)cmacpeB903
Cp4.1LG12g08040CmoCh17G007830Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g08040CmoCh08G006480Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g08040Csa7G446680Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g08040MELO3C024227Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g08040ClCG09G002180Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g08040CSPI07G21230Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g08040Lsi02G027790Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g08040MELO3C024227.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g08040CsaV3_7G033130Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g08040CsGy7G019540Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g08040Carg18811Silver-seed gourdcarcpeB1049
Cp4.1LG12g08040Carg09541Silver-seed gourdcarcpeB1424
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g08040Cp4.1LG17g05720Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g08040Cucumber (Chinese Long) v3cpecucB0156
Cp4.1LG12g08040Wax gourdcpewgoB0190
Cp4.1LG12g08040Wax gourdcpewgoB0208
Cp4.1LG12g08040Cucurbita pepo (Zucchini)cpecpeB178
Cp4.1LG12g08040Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g08040Cucurbita pepo (Zucchini)cpecpeB182
Cp4.1LG12g08040Cucurbita pepo (Zucchini)cpecpeB187
Cp4.1LG12g08040Cucurbita maxima (Rimu)cmacpeB257
Cp4.1LG12g08040Cucurbita maxima (Rimu)cmacpeB466
Cp4.1LG12g08040Cucurbita moschata (Rifu)cmocpeB052
Cp4.1LG12g08040Cucurbita moschata (Rifu)cmocpeB221
Cp4.1LG12g08040Cucurbita moschata (Rifu)cmocpeB426
Cp4.1LG12g08040Bottle gourd (USVL1VR-Ls)cpelsiB127
Cp4.1LG12g08040Watermelon (Charleston Gray)cpewcgB148
Cp4.1LG12g08040Watermelon (97103) v1cpewmB131
Cp4.1LG12g08040Watermelon (97103) v1cpewmB145
Cp4.1LG12g08040Melon (DHL92) v3.5.1cpemeB132
Cp4.1LG12g08040Cucumber (Gy14) v2cgybcpeB306
Cp4.1LG12g08040Melon (DHL92) v3.6.1cpemedB159
Cp4.1LG12g08040Silver-seed gourdcarcpeB0171
Cp4.1LG12g08040Silver-seed gourdcarcpeB0209
Cp4.1LG12g08040Silver-seed gourdcarcpeB0280