Carg18811 (gene) Silver-seed gourd

Overview
NameCarg18811
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein SYS1 homolog
LocationCucurbita_argyrosperma_scaffold_123 : 351865 .. 354599 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTGGATTTTACACGAGTTTACAACTGTAGCGCATCTCCACAAACGAAATTCTCCGGAGCAGAACAACACGACCTAAAATTTCAGAAGAAAAAAGGGGAACGAAATTTGCTAGGAAGCCTAAATTTTGTCTCTTCTCGATCTTAAGATTGACGGTTTTACATGTTTCATGTTTGATCTTATTCTTATTCGCATTGCGGTGCGTTCGTTGTATTAGCGAATTTGGGATTTATTTGATTTCTAGGGTTGGATTCTGTAGGGAATTGGAATTTATTTGATATCTAGGGTTGAATTTTTTAGGGAATTGGGATTCACTTCTCTCTTTGATTTTGAATGTTACTCTAGATACATATTGTTTGGCTTTTAGTATGGGTGGATGTACGATTTGTTTGTTTCAGATCGAATGAAACGAGATCGTAAAATCATCGTTACGAAGATTTTAGGGAGTTCTATTCCGAAGGGGCGACAAATTCACGAAGAGAAATGGGCATATGTTGGATTTTATTGTCAATTTGAGAGCGTGAAAAGGATAGATAATAAGTCCTTTATTGTTGGGAAATCGACTGTTCTTCACTCCACGAGTTCGTAATTTATATTTGGTTTATACTGAAAGAAGTTGGGTTCTGTTGAAGTTAGGACCGAGTGAGTGGTGAAGTCATGTTCTATGGTGCATTGGTATGGGATCCATGGCTAATTGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTGACTCTTGGCATTCTGCTGGCGACTCTAGTTGGGACTCGTGTTTCTCGAATCAGCCTTGTTTACTTCTTTGATTATGCTACACTAACTGTCTCTACGGCCACTGGTTTGTGTGTTATTGCTTCATTCCTGCTAACTGCGCTTGCTGGGTAAGAACTCTGTTTTACTTTTTTTCTCCTCCATATTCGGTATTATGTATATAACCACAGACTAGTTGATGCATACACTCTTGACCAAGAATCTCTCCACCATGTTCATTTGAATCTCCTCATCCCATATGTTGTTTGAATCACTATGCATTGGATTGTTAGGAATAATTGACAGTAGTTTGGAGAAGTTGCATCCTATCGAACCATTGTTAGATCATTTGGAATTAAATAGATTAATCGACCTCGCTGATGTTGTTTTTATTGTTAACCATGAAATGGTTTGTTTGAATGTCAATATTAATGATTTTGTTCTTATCTCTAATTATGTAATGAGGCCATTTTTGTTGTCACCTGTAGTTGCTGTAACTTTTTGATGTCGAAGTTTGTTCTTCTTAATGGTTTGCTGTATCTATTGGTGGTTCCTTCTGCAATTGATGTGAATTTCAATGTTTTTGTCTGTTGCCATCGCAGAAATTCACATGGTAAACATTTAAATATATGAAACTCTACAGAATGGAAGTTTTTCCTAAATGGTGTTTTCAATTGGGCTCGGGGTTGGGAATAGTAACGTAGTTTTGGAATGGTATCAACTAATTGATCTTGATTTGGCTGAATGTTACCCTAAACAACACCTCTATAGTATTGTTACGTTTTCCTGATGAGAATAACACTCTCTTCCAACCGGGAATTGGTTGGAGAGTTTTGAAAATTAAGCTTATAACCCCTACTTCCACCCATGAATTTCTTTGAAAATTAAGCTTATCAAATGCGTTTAAGTAGTCGGTTTTGAATATTTTTCTTCATCTTCATATTGTTTATGTTGTCAGCTTCTCTCACCATTACTATTTTATTGTAATGCAGGGCAGGATTTTTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCGGCCACACTCTATATATTCCACCTTTTCATCTGTATCGCTTATGGAGGGTGGCCTTCGTCGATGACATGGTGGGTTGTGAATGGTACAGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGTATCAAACGTGAACTGCGAGAGATTCCCATAACACGATTGCGTTCGAGTAAGGCTTCTTTCCTCAATGAAATGAACAAAAGAATCTTCTTTGACAGTCATAATTCATAGTAGTAACAACTAACATAGACTGCCAAAACAAAACATACTTGCTACTACACAAATTTTATGCTTGGATTTTCAATTGAGTTTAACATGTTCTGATATGTACATAAAAGGGTTGGATCACATCTGAGTGGTCATAAGTTTTGGTCCCTCTCACTGAGAAGCAGATTTAGTTGTAGCATATAACATTGAGCATATTTTGGTGCAGATGTTTGAGCTTTAAGGGAAGTTCAAATTGCAAGAACCACCTGTTGATGTGTGTGAATTTCAGTGGCCTATCTTATTAAATCTGCCTAGGCCAGATCAAATTAGTATCAAGGAAGAAGAATCTCTTTGAGATATTGGAAAAACTGGCATTATTGGTGCACTGGATTTATTATATTTGATTGGAGGGTTTACATGAGTTCCATGAAGTTCTTGGGGGAAAGAGCTCACTTTCAATGGACAAAAAGGCTATGACTAATGCCTATATGAGCTCGATTCATTTGTTCTTTTCTCTTTTCAACTCCTCACACGGATGAGTTTACAGCTTAGTTTGGAAAGGAAACTTCTTTATTCTCTTTCTTTCTTGCTCTTCTGAAGTTTCAATGACAGTGAAAAGCCATGATGATGATAATCAGAATTTAATATGGAAACTAAAGGAGAATTCTGTTGGATTGCTTTTGTTTTCTATTATTGCTTTGATACTCTTGCTTTCCTCTTCATAAAAGC

mRNA sequence

GCTTGGATTTTACACGAGTTTACAACTGTAGCGCATCTCCACAAACGAAATTCTCCGGAGCAGAACAACACGACCTAAAATTTCAGAAGAAAAAAGGGGAACGAAATTTGCTAGGAAGCCTAAATTTTGTCTCTTCTCGATCTTAAGATTGACGGTTTTACATGTTTCATGTTTGATCTTATTCTTATTCGCATTGCGGTGCGTTCGTTGTATTAGCGAATTTGGGATTTATTTGATTTCTAGGGTTGGATTCTGTAGGGAATTGGAATTTATTTGATATCTAGGGTTGAATTTTTTAGGGAATTGGGATTCACTTCTCTCTTTGATTTTGAATGTTACTCTAGATACATATTGTTTGGCTTTTAGTATGGGTGGATGTACGATTTGTTTGTTTCAGATCGAATGAAACGAGATCGTAAAATCATCGTTACGAAGATTTTAGGGAGTTCTATTCCGAAGGGGCGACAAATTCACGAAGAGAAATGGGCATATGTTGGATTTTATTGTCAATTTGAGAGCGTGAAAAGGATAGATAATAAGTCCTTTATTGTTGGGAAATCGACTGTTCTTCACTCCACGAGTTCGTAATTTATATTTGGTTTATACTGAAAGAAGTTGGGTTCTGTTGAAGTTAGGACCGAGTGAGTGGTGAAGTCATGTTCTATGGTGCATTGGTATGGGATCCATGGCTAATTGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTGACTCTTGGCATTCTGCTGGCGACTCTAGTTGGGACTCGTGTTTCTCGAATCAGCCTTGTTTACTTCTTTGATTATGCTACACTAACTGTCTCTACGGCCACTGGTTTGTGTGTTATTGCTTCATTCCTGCTAACTGCGCTTGCTGGGGCAGGATTTTTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCGGCCACACTCTATATATTCCACCTTTTCATCTGTATCGCTTATGGAGGGTGGCCTTCGTCGATGACATGGTGGGTTGTGAATGGTACAGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGTATCAAACGTGAACTGCGAGAGATTCCCATAACACGATTGCGTTCGAATGTTTGAGCTTTAAGGGAAGTTCAAATTGCAAGAACCACCTGTTGATGTGTGTGAATTTCAGTGGCCTATCTTATTAAATCTGCCTAGGCCAGATCAAATTAGTATCAAGGAAGAAGAATCTCTTTGAGATATTGGAAAAACTGGCATTATTGGTGCACTGGATTTATTATATTTGATTGGAGGGTTTACATGAGTTCCATGAAGTTCTTGGGGGAAAGAGCTCACTTTCAATGGACAAAAAGGCTATGACTAATGCCTATATGAGCTCGATTCATTTGTTCTTTTCTCTTTTCAACTCCTCACACGGATGAGTTTACAGCTTAGTTTGGAAAGGAAACTTCTTTATTCTCTTTCTTTCTTGCTCTTCTGAAGTTTCAATGACAGTGAAAAGCCATGATGATGATAATCAGAATTTAATATGGAAACTAAAGGAGAATTCTGTTGGATTGCTTTTGTTTTCTATTATTGCTTTGATACTCTTGCTTTCCTCTTCATAAAAGC

Coding sequence (CDS)

ATGTTCTATGGTGCATTGGTATGGGATCCATGGCTAATTGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTGACTCTTGGCATTCTGCTGGCGACTCTAGTTGGGACTCGTGTTTCTCGAATCAGCCTTGTTTACTTCTTTGATTATGCTACACTAACTGTCTCTACGGCCACTGGTTTGTGTGTTATTGCTTCATTCCTGCTAACTGCGCTTGCTGGGGCAGGATTTTTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCGGCCACACTCTATATATTCCACCTTTTCATCTGTATCGCTTATGGAGGGTGGCCTTCGTCGATGACATGGTGGGTTGTGAATGGTACAGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGTATCAAACGTGAACTGCGAGAGATTCCCATAACACGATTGCGTTCGAATGTTTGA

Protein sequence

MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTATGLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Homology
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BLAST of Carg18811 vs. NCBI nr
Match: XP_022964515.1 (protein SYS1 homolog [Cucurbita moschata])

HSP 1 Score: 294.7 bits (753), Expect = 1.8e-76
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT
Sbjct: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYI HLFICIAYGGWPSSMTWWVVN
Sbjct: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYILHLFICIAYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of Carg18811 vs. NCBI nr
Match: XP_023514353.1 (protein SYS1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.5 bits (750), Expect = 4.1e-76
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGALVWDPWLIVAQIVCLQCLYYLTLG+LLATLVGTRVSRISLVYFFDYATLTVSTAT
Sbjct: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGMLLATLVGTRVSRISLVYFFDYATLTVSTAT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYI HLFICIAYGGWPSSMTWWVVN
Sbjct: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYILHLFICIAYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of Carg18811 vs. NCBI nr
Match: XP_023000404.1 (protein SYS1 homolog [Cucurbita maxima])

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-75
Identity = 149/152 (98.03%), Postives = 149/152 (98.03%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGALVWDPWLIVAQIVCLQCLYYLTLGI LATLVGTRVSRISLVYFFDYATLTVST T
Sbjct: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGIFLATLVGTRVSRISLVYFFDYATLTVSTTT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYI HLFICIAYGGWPSSMTWWVVN
Sbjct: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYILHLFICIAYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of Carg18811 vs. NCBI nr
Match: XP_011659561.1 (PREDICTED: protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_7G446680 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 2.5e-73
Identity = 143/152 (94.08%), Postives = 149/152 (98.03%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGA+VWDPWLIVAQIVCLQC YYLTLGILLATLVGTRVSRISLVYFFDYAT++VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G CVIASFLL+A+AGAG+LVYLIERAKKCLDFAATLYIFHLFICI YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of Carg18811 vs. NCBI nr
Match: XP_008462142.1 (PREDICTED: protein SYS1 homolog [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 7.3e-73
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI LATLVGTRVSRISLVYFFDYAT+TVSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G CVIASFLL+A+AGAG+LVYLIERAKKCLDFAATLYIFHLFICI YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of Carg18811 vs. TAIR10
Match: AT1G79990.1 (structural molecules)

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-59
Identity = 109/151 (72.19%), Postives = 124/151 (82.12%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYATLT ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G  VIASFL ++LAGA ++++L+ERA+KCLDF+ATLYI HLF CI YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSN 152
           GTGL VM+LL EYLCIKRE REIP+ R  SN
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSN 151

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BLAST of Carg18811 vs. Swiss-Prot
Match: sp|Q55E69|SYS1_DICDI (Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.9e-26
Identity = 59/147 (40.14%), Postives = 94/147 (63.95%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFY    WDP LI+ QI+ +QCLYY+ L  +L  L     S +SL   F+Y ++   + +
Sbjct: 1   MFYKYNAWDPKLIIGQILSIQCLYYILLAGILYLLDSMFSSSLSLEQMFEYQSINTHSQS 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G  V+ +FL+ +L G+  L Y++ER+KKCLD +AT+   H  I     G+P ++ WW + 
Sbjct: 61  GRVVMTAFLINSLFGSFCLKYIVERSKKCLDHSATVTFIHFIIVWIVSGFPKTVVWWAIQ 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITR 148
             G+V+M+++GEYLC+++EL +IP+ R
Sbjct: 121 LIGMVIMAMIGEYLCMRKELMDIPLQR 147

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BLAST of Carg18811 vs. Swiss-Prot
Match: sp|Q8N2H4|SYS1_HUMAN (Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 67/152 (44.08%), Postives = 96/152 (63.16%), Query Frame = 0 

Query: 3   YGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTATGL 62
           + + VWDP LI++QIV +Q +YY +LG+ LA + G   S  SL   FD   L  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGG-WPSSMTWWVVNG 122
             + SF+L AL  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPITRL-RSNV 153
             + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]
BLAST of Carg18811 vs. Swiss-Prot
Match: sp|A4K2N5|SYS1_PAPAN (Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 67/152 (44.08%), Postives = 96/152 (63.16%), Query Frame = 0 

Query: 3   YGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTATGL 62
           + + VWDP LI++QIV +Q +YY +LG+ LA + G   S  SL   FD   L  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGG-WPSSMTWWVVNG 122
             + SF+L AL  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPITRL-RSNV 153
             + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

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BLAST of Carg18811 vs. Swiss-Prot
Match: sp|A4K2W1|SYS1_PONAB (Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 67/152 (44.08%), Postives = 96/152 (63.16%), Query Frame = 0 

Query: 3   YGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTATGL 62
           + + VWDP LI++QIV +Q +YY +LG+ LA + G   S  SL   FD   L  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGG-WPSSMTWWVVNG 122
             + SF+L AL  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPITRL-RSNV 153
             + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

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BLAST of Carg18811 vs. Swiss-Prot
Match: sp|A7S6Y0|SYS1_NEMVE (Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.6e-24
Identity = 57/140 (40.71%), Postives = 92/140 (65.71%), Query Frame = 0 

Query: 7   VWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTATGLCVIA 66
           VWDP LI++QI+ +QC +Y++LG+ +  +     S  SL  FF Y  L +S+  G  ++ 
Sbjct: 9   VWDPVLIISQIIAIQCTFYISLGVWVLIVDYWSGSIHSLDQFFAYKELDISSLKGKLLMI 68

Query: 67  SFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVNGTGLVV 126
           +F L +L GA  L ++++RAK+CLDF  T +I HL  C  Y G+P S TWW++N   L +
Sbjct: 69  AFCLNSLTGAMALWFIVKRAKQCLDFTTTAHIVHLVFCCIYAGFPFSWTWWLLNIICLAL 128

Query: 127 MSLLGEYLCIKRELREIPIT 147
           M+++GE++C+K EL+ I ++
Sbjct: 129 MAVIGEFVCMKTELKAIKVS 148

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BLAST of Carg18811 vs. TrEMBL
Match: tr|A0A0A0KC23|A0A0A0KC23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-73
Identity = 143/152 (94.08%), Postives = 149/152 (98.03%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGA+VWDPWLIVAQIVCLQC YYLTLGILLATLVGTRVSRISLVYFFDYAT++VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G CVIASFLL+A+AGAG+LVYLIERAKKCLDFAATLYIFHLFICI YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]
BLAST of Carg18811 vs. TrEMBL
Match: tr|A0A1S3CGS5|A0A1S3CGS5_CUCME (protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 4.8e-73
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI LATLVGTRVSRISLVYFFDYAT+TVSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G CVIASFLL+A+AGAG+LVYLIERAKKCLDFAATLYIFHLFICI YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]
BLAST of Carg18811 vs. TrEMBL
Match: tr|A0A068TRT1|A0A068TRT1_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022044001 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.1e-67
Identity = 129/152 (84.87%), Postives = 142/152 (93.42%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGA+VWDPWLIVAQIVCLQCLYYLTLG+ LA LVGTRVSR+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGLFLAILVGTRVSRMSLVYFFDYATVTASTVT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G CVIASF+L++LAGAGFLVYL+ERAKKCLDF+ATLYI H+FICI YGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFILSSLAGAGFLVYLVERAKKCLDFSATLYIIHIFICIIYGGWPSSITWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
            TGL VM+LLGEYLCI+RELREIPITR RSNV
Sbjct: 121 VTGLAVMALLGEYLCIRRELREIPITRYRSNV 152

[Close]
BLAST of Carg18811 vs. TrEMBL
Match: tr|A0A067KY88|A0A067KY88_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06256 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.7e-67
Identity = 128/152 (84.21%), Postives = 141/152 (92.76%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYGA+VWDPWLIVAQIVCLQCLYYLTLG+ L+ LVGTRVSR+SLVYFFD+  LT ST T
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGLFLSILVGTRVSRLSLVYFFDFVALTTSTVT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G CVIASFL +++AGAGF++YLIERAKKCLDF+ATLYI HLFICI YGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFLFSSIAGAGFMLYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSITWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGL VM+LLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLAVMALLGEYLCIKRELREIPITRLRSNV 152

[Close]
BLAST of Carg18811 vs. TrEMBL
Match: tr|M5X456|M5X456_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G071900 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 9.7e-66
Identity = 127/152 (83.55%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 1   MFYGALVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTAT 60
           MFYG LVWDPWLIV QIVCLQCLYYLTLG  L+ LVGTRVSR+SLVYFFDYATLTVST T
Sbjct: 1   MFYGTLVWDPWLIVVQIVCLQCLYYLTLGFFLSILVGTRVSRMSLVYFFDYATLTVSTVT 60

Query: 61  GLCVIASFLLTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAYGGWPSSMTWWVVN 120
           G CVIASF+L+ALAGAG+L+ LIERAKKCLDF+AT+YI HLFICI YGGWPSS+TWWVVN
Sbjct: 61  GWCVIASFMLSALAGAGYLLLLIERAKKCLDFSATVYIVHLFICIFYGGWPSSITWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTG+ VM+LLGEYLCI+REL+EIPITR RSNV
Sbjct: 121 GTGIAVMALLGEYLCIRRELKEIPITRFRSNV 152

The following BLAST results are available for this feature:
BLAST of Carg18811 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964515.11.8e-7699.34protein SYS1 homolog [Cucurbita moschata][more]
XP_023514353.14.1e-7698.68protein SYS1 homolog [Cucurbita pepo subsp. pepo][more]
XP_023000404.11.6e-7598.03protein SYS1 homolog [Cucurbita maxima][more]
XP_011659561.12.5e-7394.08PREDICTED: protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical prote... [more]
XP_008462142.17.3e-7394.08PREDICTED: protein SYS1 homolog [Cucumis melo][more]
BLAST of Carg18811 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79990.11.9e-5972.19structural molecules[more]
BLAST of Carg18811 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q55E69|SYS1_DICDI5.9e-2640.14Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1[more]
sp|Q8N2H4|SYS1_HUMAN3.3e-2444.08Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1[more]
sp|A4K2N5|SYS1_PAPAN3.3e-2444.08Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1[more]
sp|A4K2W1|SYS1_PONAB3.3e-2444.08Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1[more]
sp|A7S6Y0|SYS1_NEMVE5.6e-2440.71Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1[more]
BLAST of Carg18811 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KC23|A0A0A0KC23_CUCSA1.7e-7394.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=4 SV=1[more]
tr|A0A1S3CGS5|A0A1S3CGS5_CUCME4.8e-7394.08protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=4 SV=1[more]
tr|A0A068TRT1|A0A068TRT1_COFCA5.1e-6784.87Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022044001 PE=4 ... [more]
tr|A0A067KY88|A0A067KY88_JATCU6.7e-6784.21Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06256 PE=4 SV=1[more]
tr|M5X456|M5X456_PRUPE9.7e-6683.55Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G071900 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019185Integral_membrane_SYS1-rel
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18811-RACarg18811-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019185Integral membrane protein SYS1-relatedPFAMPF09801SYS1coord: 6..144
e-value: 9.7E-45
score: 152.2
IPR019185Integral membrane protein SYS1-relatedPANTHERPTHR12952SYS1coord: 1..148
NoneNo IPR availablePANTHERPTHR12952:SF0RE55080Pcoord: 1..148

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18811Csa7G446680Cucumber (Chinese Long) v2carcuB0763
Carg18811MELO3C024227Melon (DHL92) v3.5.1carmeB0741
Carg18811ClCG09G002180Watermelon (Charleston Gray)carwcgB0722
Carg18811CSPI07G21230Wild cucumber (PI 183967)carcpiB0780
Carg18811Cucsa.358970Cucumber (Gy14) v1carcgyB0839
Carg18811CmaCh08G006850Cucurbita maxima (Rimu)carcmaB1046
Carg18811CmaCh17G008150Cucurbita maxima (Rimu)carcmaB1044
Carg18811CmoCh17G007830Cucurbita moschata (Rifu)carcmoB1015
Carg18811CmoCh08G006480Cucurbita moschata (Rifu)carcmoB1018
Carg18811Lsi02G027790Bottle gourd (USVL1VR-Ls)carlsiB684
Carg18811Cp4.1LG17g05720Cucurbita pepo (Zucchini)carcpeB1051
Carg18811Cp4.1LG12g08040Cucurbita pepo (Zucchini)carcpeB1049
Carg18811CsGy7G019540Cucumber (Gy14) v2carcgybB0742
Carg18811MELO3C024227.2Melon (DHL92) v3.6.1carmedB0754
Carg18811CsaV3_7G033130Cucumber (Chinese Long) v3carcucB0783
Carg18811Cla97C09G164330Watermelon (97103) v2carwmbB0782
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18811Carg09541Silver-seed gourdcarcarB596
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18811Wax gourdcarwgoB0879
Carg18811Wax gourdcarwgoB0883
Carg18811Silver-seed gourdcarcarB143
Carg18811Silver-seed gourdcarcarB234
Carg18811Cucumber (Gy14) v2carcgybB0739
Carg18811Cucurbita maxima (Rimu)carcmaB1043
Carg18811Cucurbita maxima (Rimu)carcmaB1045
Carg18811Cucurbita moschata (Rifu)carcmoB1014
Carg18811Cucurbita moschata (Rifu)carcmoB1017
Carg18811Cucurbita pepo (Zucchini)carcpeB1053
Carg18811Cucurbita pepo (Zucchini)carcpeB1054
Carg18811Wild cucumber (PI 183967)carcpiB0777
Carg18811Cucumber (Chinese Long) v3carcucB0780
Carg18811Bottle gourd (USVL1VR-Ls)carlsiB685
Carg18811Melon (DHL92) v3.5.1carmeB0742
Carg18811Melon (DHL92) v3.6.1carmedB0755
Carg18811Watermelon (Charleston Gray)carwcgB0725
Carg18811Watermelon (97103) v1carwmB0743
Carg18811Watermelon (97103) v1carwmB0746
Carg18811Watermelon (97103) v2carwmbB0781