Cp4.1LG12g06600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g06600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCytochrome b5 reductase 4
LocationCp4.1LG12 : 7423694 .. 7427465 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTCGAATTAATCCAGGAATATTGCAATTTCAGTTAAATTTCTAATTTAGTTTCTATTTTATTTATAAGTTTCAAAATATTAAATGTTATTAATGTCACAGAAAAAATTTAAGGATTGTTTTAAGTCACAAGAATATTATGATCGTACTTAAAAGAAGATCAAATAAATAAAAGAAAACCCAACTATGATCCAGCACTCTCTCTTGACGAGATTGGGGAACTCACATTCCGTCCAGAAGCTTCGTCGTCACAGGATCGCCGGCTGTAAGTTGATGATTCTTTGCTTTCTTTAGGTTGTTTACGATTATGCATATACACGAAGACATTAATCTCCTTCTCAAGTTTCTTGAGATTTCTTCTGCCGCATTTCCATTGATTTCATCTTCCTAATTTCAAGTTTGAATGGTAAAGATAATGTGGCATTGCCTTTTCCTCTGCTTTCATTACCGATTCTTTTTTTTTCAAGCGATTCAGGTAGTTTTAACTTTGATGCCTTTTGTCTCTCTGTTTTGTTTTTCCTTCGTTCTGAATTCCTTCTTCATTCCTCTTCTGTGTTTTGGTTCTGAATCTCAACTAGTGTCATGCCTATTATTTCTCTTCTGATGTCGTGATTCCATCTTTTTTTTTTTTTTTGAATCGCGGATTATCATTTTCTTCTGTTTTATACAGTTAGACTATAGGACCGGACAATGCGGCAAAATTAGATTCAGAAATACGCTTTGAATCAATCACTGGACGATCTGTTTCAACTCGCACGGTGCAATTGTATAGTGCGAGTTTAACATCACTGTGTTAGTTCATGTTAGTTGTGTTTAGGTGATAAATTGGTGCTGTTCTCCACTAAAAAAGTTTTACCTCTTCATTCCTATGATAAATGTAAACTATCGATCTTGTTTCTTGATGGATGATCTTCGGAATATTCGTAGATTACTGCATTTCTTCGGTCTCCTTACCTTTACTTTCACAAGATAATGATAATATTTATATCCTTATTAGGGTAATATTAATTTATACAATGAGTCTAAATTTGCTGATTTCGAAATAAGTTCACTGACACTAGTTAAATAAATTGCATTCACTTTATTTGAAATATAGATCAAATGTAAATGGAAAATCATGTTCTATCTACTATCTATTGACTACGGGTATTGTAATGCAGCAGAACAATTTCTTGAAGTTTTGCTGTTGGATGAGAGAGGTTGCTTGAAATTTGGGACTAAATATTCAGATGGATTTTAATAATGACTTCACATTTTATCAGGCAAGTATACTTTTTATTCTATAAAATTAGGTCTTAAGTTTTTAACTCAATGACATGTTTTCTTCTTTCTATTGTTTCGCCATCTTCAGTTGGAAAAATGTTTGGTATCCAACGTAAGTTATACTACTGTTACTGTTATATGAATATAGTAGGTGGGTTTAGCTGAAAAGGATGATAAAGAGGCGAGGGATCTTGCATCAGAAATAGGCGATATTACCTTGAGGGATGAATTGGCGAATAACACCGTTAGTAGGACTCATGTCATTTTGAATGATAAACTATCGAATGATATCAATTCCAGAAAGCAGGCAACAGTTGGTTCTTTGGATTTCAATTGGTCTTCAAAACAATCAAGTACGTTGCCAACAGAAGAGGTGAGGAAAGATACTGGAAAGGTTGTGAAGAAATCAAAAAAACAAGGGATTGCTGTGCGTAAGCATGCAGTTCGAACAAAGGTTCCTTTTGAGAAGGGATATAGTCAAATGGATTGGCTTAAGCTTACTCGAACCCATCCTGATCTTGCAGGTATTTGTGAAACTGCCTTGCATTTTGATATTATGATTTGCTTGAGCCTATCTGGCAACTCTTTTATTCTTCTTGTTAAGACAATTGTCTATCTTTTAATTTGGTAAGCTCTTTTAACTTTGATGAAAACAACAATTTAATCCCTGAATTTAATTTGTAATATAGCTCTTGAAATTTAAAATTTATAACAATTTGGTCATTGAACTTTAGTATGTAACCTTCCAATCCCTATAATGAAAGAATTCATCATAATTGAGTGTTGGTTTTTATTCTTTGATGACTTGACCTTTATTGATCTACTTATGTTAGAAATATTAAAATTTTACAATATTTTTCATGATAGAGATTAAATTATTACCAAATTATTACCAACTTCTAAGATACATGGACTAAATCGTTACATACTAAAATTTATGGATCAAATTGTTACAAAATTGAATAGATAGGGATTAAAGCGTTAGAAACTTAAGTTTAGAGATTAAATTGTTATTTCTAAGTCTACGTGTAATCTTGCCCTCTGTTGATGTTTGTTTAGGCTGTTTTAGAGAGAAATTGTTTGCAGCTAGCTGGTGCTTGCCATGTTTAAGATTCAGAAAAGCTACTAAATATCTATTTTATCTAAATTATGAACTTCACAGAGGACACACTTGCCATTTTCTTTGTGCCTACATCAGAATCAATATGATTGTTATTATCTGTGTTGCAAAATCGGATCATTTTTGTTGTTTTCAGGGTTGTTAATGGTACTAATTTACCCCCTGAGAAATAATGCTAGTGATTTTGAACATTTGTTCATGACTGTGGATTAGAATTGAAAGGCCAGTCAAATAAAAGGCTTATCCCTATGAGCGAAGTTAAACAACATCAGAGTGAGGGCTCCATGTGGACTGTTCTGAGAGGTCGCGTGTACAATTTATCTCCTTATATGAAGTTTCACCCTGGAGGTATGGGCATCATGCAAATTTATTTTTTCCAAGTTAAAATATCTTTTTTTAGTGAATTTCCAATCCATCTGGTGAAGTAGCAAATGATTAGTTTGTAATGCATGTTATGGTGTCTCCTGTTCAAGAATTACCACTCTTGCATATATAGATTCTGCTAATATTTTATGTTCAATAAGATGGAAATTGGCAACATCATCATGTTATTCTATTCTTTGAAGGGTGATTAGTCTCCTTTATTCATGACCTAGGTAGATAGCTCATAAGAGACTAGCTTCTAGTTCTCTACTAATATATTCCTAATCCTGGCTCTGATTCTTTCATGTACTTTCTAGTTATTATTTGGGATAATTCTTGAAATGCATTTTTAAAATCATGATTGAGAGTTATTAGAGTACATCAAAGGCATGTTCTTGGGGGTAGACTTGAAGTAGTTGACCTTTTGACAAACTTCTTTATCAGGTACTGAAATACTCATGAAGGCAGTGGGAAAAGATTGTACATCTTTATTCGGTATCCTTGGAATTTTGTTTAGTTTTTTGTTAATAACGTCTATCTCGATGGAACAAACGTTGTTGCCATCTTTAATTTTTCGTGCAGCTTCCATCGGTTTATTTAACGAATTCTGAATTGGTAACAAAAAGTTGTGTCCTTAAACAACCTTCAGATAAATACCATGCTTGGGTGAATGCTGAATTTTTGCTGGAGGAGTGTCTGATCGGCACCTTGGATGATAGACATCGACGGTTCTATGGTATGCCTTGACCATGTCAAGATGCTATATTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAGTTCCTCAGCACGACACAAACTCGGATGAAATTTTAACACTTATCGACCTTTAACGTTCAAGAGAACAATTTGTTCTTCATGTGGTTCTTGAGTTTTGGAATAAAACAAGTTTCTTTTCTTCAAAATTGTGAGATCTAGAGTGTAAGTACTACATGGGTTCATTTACGTTTCCACTGTCTAATGGACAATGATAATCAACGAAAATAGATAAAAATT

mRNA sequence

GAATTCGAATTAATCCAGGAATATTGCAATTTCAGTTAAATTTCTAATTTAGTTTCTATTTTATTTATAAGTTTCAAAATATTAAATGTTATTAATGTCACAGAAAAAATTTAAGGATTGTTTTAAGTCACAAGAATATTATGATCGTACTTAAAAGAAGATCAAATAAATAAAAGAAAACCCAACTATGATCCAGCACTCTCTCTTGACGAGATTGGGGAACTCACATTCCGTCCAGAAGCTTCGTCGTCACAGGATCGCCGGCTCAGAACAATTTCTTGAAGTTTTGCTGTTGGATGAGAGAGGTTGCTTGAAATTTGGGACTAAATATTCAGATGGATTTTAATAATGACTTCACATTTTATCAGTTGGAAAAATGTTTGGTATCCAACGTAAGTTATACTACTGTTACTGTTATATGAATATAGTAGGTGGGTTTAGCTGAAAAGGATGATAAAGAGGCGAGGGATCTTGCATCAGAAATAGGCGATATTACCTTGAGGGATGAATTGGCGAATAACACCGTTAGTAGGACTCATGTCATTTTGAATGATAAACTATCGAATGATATCAATTCCAGAAAGCAGGCAACAGTTGGTTCTTTGGATTTCAATTGGTCTTCAAAACAATCAAGTACGTTGCCAACAGAAGAGGTGAGGAAAGATACTGGAAAGGTTGTGAAGAAATCAAAAAAACAAGGGATTGCTGTGCGTAAGCATGCAGTTCGAACAAAGGTTCCTTTTGAGAAGGGATATAGTCAAATGGATTGGCTTAAGCTTACTCGAACCCATCCTGATCTTGCAGAATTGAAAGGCCAGTCAAATAAAAGGCTTATCCCTATGAGCGAAGTTAAACAACATCAGAGTGAGGGCTCCATGTGGACTGTTCTGAGAGGTCGCGTGTACAATTTATCTCCTTATATGAAGTTTCACCCTGGAGGTACTGAAATACTCATGAAGGCAGTGGGAAAAGATTGTACATCTTTATTCGATAAATACCATGCTTGGGTGAATGCTGAATTTTTGCTGGAGGAGTGTCTGATCGGCACCTTGGATGATAGACATCGACGGTTCTATGGTATGCCTTGACCATGTCAAGATGCTATATTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAGTTCCTCAGCACGACACAAACTCGGATGAAATTTTAACACTTATCGACCTTTAACGTTCAAGAGAACAATTTGTTCTTCATGTGGTTCTTGAGTTTTGGAATAAAACAAGTTTCTTTTCTTCAAAATTGTGAGATCTAGAGTGTAAGTACTACATGGGTTCATTTACGTTTCCACTGTCTAATGGACAATGATAATCAACGAAAATAGATAAAAATT

Coding sequence (CDS)

ATGGATTGGCTTAAGCTTACTCGAACCCATCCTGATCTTGCAGAATTGAAAGGCCAGTCAAATAAAAGGCTTATCCCTATGAGCGAAGTTAAACAACATCAGAGTGAGGGCTCCATGTGGACTGTTCTGAGAGGTCGCGTGTACAATTTATCTCCTTATATGAAGTTTCACCCTGGAGGTACTGAAATACTCATGAAGGCAGTGGGAAAAGATTGTACATCTTTATTCGATAAATACCATGCTTGGGTGAATGCTGAATTTTTGCTGGAGGAGTGTCTGATCGGCACCTTGGATGATAGACATCGACGGTTCTATGGTATGCCTTGA

Protein sequence

MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGGTEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRHRRFYGMP
Homology
[Close]
BLAST of Cp4.1LG12g06600 vs. Swiss-Prot
Match: RLF_ARATH (Cytochrome b5 domain-containing protein RLF OS=Arabidopsis thaliana GN=RLF PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-42
Identity = 75/99 (75.76%), Postives = 88/99 (88.89%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLTRTHPDLA LKG+SNKRLIPM EVK+H++  SMWTVL+GRVYN+SPYM FHPGG
Sbjct: 105 MDWLKLTRTHPDLAGLKGESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGG 164

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDD 100
            ++LMKAVG+D T LF+KYHAWVN + LLE+CL+G LDD
Sbjct: 165 VDMLMKAVGRDGTLLFNKYHAWVNVDILLEKCLVGVLDD 203

[Close]
BLAST of Cp4.1LG12g06600 vs. Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.6e-25
Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSE--VKQHQSEGSMWTVLRGRVYNLSPYMKFHP 60
           MDW++LT++  DL  LKG    RLI ++E  + QH  +   W  +RG VYN++PYM++HP
Sbjct: 35  MDWIRLTKSGKDLTGLKG----RLIDVTEEELAQHNKKEDCWICIRGMVYNITPYMEYHP 94

Query: 61  GGTEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRH 102
           GG E LMKA G+D T LFD+ H WVN E +L+ECLIG +  +H
Sbjct: 95  GGEEELMKAAGRDGTDLFDQVHRWVNYESMLKECLIGRMAIKH 133

[Close]
BLAST of Cp4.1LG12g06600 vs. Swiss-Prot
Match: NB5R4_BOVIN (Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSE--VKQHQSEGSMWTVLRGRVYNLSPYMKFHP 60
           MDW++LT++  DL  LKG    RLI ++E  +K+H  +   W  +RG VYN+SPYM++HP
Sbjct: 35  MDWIRLTKSGKDLTGLKG----RLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHP 94

Query: 61  GGTEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTL 98
           GG + LM+A G D T LFD+ H WVN E +L+ECL+G +
Sbjct: 95  GGEDELMRAAGSDGTDLFDQVHRWVNYESMLKECLVGRM 129

[Close]
BLAST of Cp4.1LG12g06600 vs. Swiss-Prot
Match: NB5R4_DANRE (Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 50/99 (50.51%), Postives = 69/99 (69.70%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSE--VKQHQSEGSMWTVLRGRVYNLSPYMKFHP 60
           +DW++LT++  DL  L+G    RLI ++E  +K+H ++   WT +RG VYNLS YM FHP
Sbjct: 37  LDWIRLTKSGQDLTGLRG----RLIEVTEDELKKHNTKKDCWTCIRGMVYNLSAYMDFHP 96

Query: 61  GGTEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTL 98
           GG E LM+A G D T LFD+ H WVN E +L+ECL+G +
Sbjct: 97  GGEEELMRAAGIDSTDLFDEVHRWVNYESMLKECLVGRM 131

[Close]
BLAST of Cp4.1LG12g06600 vs. Swiss-Prot
Match: NB5R4_HUMAN (Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSE--VKQHQSEGSMWTVLRGRVYNLSPYMKFHP 60
           MDW++LT++  DL  LKG    RLI ++E  +K+H  +   W  +RG VYN+SPYM++HP
Sbjct: 35  MDWIRLTKSGKDLTGLKG----RLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHP 94

Query: 61  GGTEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTL 98
           GG + LM+A G D T LFD+ H WVN E +L+ECL+G +
Sbjct: 95  GGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRM 129

[Close]
BLAST of Cp4.1LG12g06600 vs. TrEMBL
Match: A0A0A0K899_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G426500 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-48
Identity = 87/101 (86.14%), Postives = 97/101 (96.04%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLT+THPDLA LKGQSNKRLIPMSEVK+H++EGSMWTVL+G VYN+SPYMKFHPGG
Sbjct: 214 MDWLKLTQTHPDLAGLKGQSNKRLIPMSEVKEHRTEGSMWTVLKGHVYNISPYMKFHPGG 273

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRH 102
            +ILMKAVGKDCTSLF+KYHAWVNAEFLLE+CL+GTLDD H
Sbjct: 274 ADILMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLDDSH 314

[Close]
BLAST of Cp4.1LG12g06600 vs. TrEMBL
Match: A0A067L554_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16844 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.1e-47
Identity = 86/99 (86.87%), Postives = 96/99 (96.97%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLT+THPDLA LKGQSNKRLI ++EVKQHQSEGSMWTVL+GRVYNLSPYMKFHPGG
Sbjct: 125 MDWLKLTQTHPDLAGLKGQSNKRLISINEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 184

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDD 100
            ++LMKAVGKDCTSLF+KYHAWVNAEFLLE+CL+GTLD+
Sbjct: 185 VDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLDE 223

[Close]
BLAST of Cp4.1LG12g06600 vs. TrEMBL
Match: V4TL01_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032828mg PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.1e-47
Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           +DWL+LT+THPDLA LKGQSNKRLI M EVKQHQSEGSMWTVL+GRVYNLSPYMKFHPGG
Sbjct: 88  VDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRHRR 104
            ++LMKAVGKDCT+LF+KYHAWVNAEFLLE+CL+GTLDD   R
Sbjct: 148 VDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTLDDSRPR 190

[Close]
BLAST of Cp4.1LG12g06600 vs. TrEMBL
Match: A0A067GV17_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029559mg PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.1e-47
Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           +DWL+LT+THPDLA LKGQSNKRLI M EVKQHQSEGSMWTVL+GRVYNLSPYMKFHPGG
Sbjct: 88  VDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRHRR 104
            ++LMKAVGKDCT+LF+KYHAWVNAEFLLE+CL+GTLDD   R
Sbjct: 148 VDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTLDDSRPR 190

[Close]
BLAST of Cp4.1LG12g06600 vs. TrEMBL
Match: B9GFC2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s27100g PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-46
Identity = 86/98 (87.76%), Postives = 93/98 (94.90%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLTRTHPDLA LKGQSNKRLI M EVK HQ+EGSMWTVL+GRVYNLSPY+KFHPGG
Sbjct: 129 MDWLKLTRTHPDLAGLKGQSNKRLISMDEVKLHQTEGSMWTVLKGRVYNLSPYLKFHPGG 188

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLD 99
            +ILMKAVGKDCTSLF+KYHAWVNAEFLLE+CL+GTLD
Sbjct: 189 ADILMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLD 226

[Close]
BLAST of Cp4.1LG12g06600 vs. TAIR10
Match: AT5G09680.1 (AT5G09680.1 reduced lateral root formation)

HSP 1 Score: 173.7 bits (439), Expect = 6.1e-44
Identity = 75/99 (75.76%), Postives = 88/99 (88.89%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLTRTHPDLA LKG+SNKRLIPM EVK+H++  SMWTVL+GRVYN+SPYM FHPGG
Sbjct: 105 MDWLKLTRTHPDLAGLKGESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGG 164

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDD 100
            ++LMKAVG+D T LF+KYHAWVN + LLE+CL+G LDD
Sbjct: 165 VDMLMKAVGRDGTLLFNKYHAWVNVDILLEKCLVGVLDD 203

[Close]
BLAST of Cp4.1LG12g06600 vs. TAIR10
Match: AT5G53560.1 (AT5G53560.1 cytochrome B5 isoform E)

HSP 1 Score: 67.4 bits (163), Expect = 6.2e-12
Identity = 25/79 (31.65%), Postives = 48/79 (60.76%), Query Frame = 1 

Query: 20 SNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGGTEILMKAVGKDCTSLFDKY 79
          S+++++   EV +H      W ++ G+VY+++P+M  HPGG E+L+ + GKD T+ F+  
Sbjct: 3  SDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDV 62

Query: 80 HAWVNAEFLLEECLIGTLD 99
               A  ++++  IG +D
Sbjct: 63 GHSDTARDMMDKYFIGEID 81

[Close]
BLAST of Cp4.1LG12g06600 vs. TAIR10
Match: AT1G26340.1 (AT1G26340.1 cytochrome B5 isoform A)

HSP 1 Score: 67.4 bits (163), Expect = 6.2e-12
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 1 

Query: 23  RLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGGTEILMKAVGKDCTSLFDKYHAW 82
           +L  M E   H  +   W V+ G+VY++S YM  HPGG ++L+   GKD T  F+     
Sbjct: 6   KLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFEDAGHS 65

Query: 83  VNAEFLLEECLIGTLDD 100
            +A  L+E+  IG LD+
Sbjct: 66  KDARELMEKYFIGELDE 82

[Close]
BLAST of Cp4.1LG12g06600 vs. TAIR10
Match: AT2G32720.1 (AT2G32720.1 cytochrome B5 isoform B)

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 24/76 (31.58%), Postives = 46/76 (60.53%), Query Frame = 1 

Query: 23 RLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGGTEILMKAVGKDCTSLFDKYHAW 82
          ++  +SEV +H      W V+ G+VYN++ +++ HPGG ++L+ + GKD T  F+     
Sbjct: 6  KIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHS 65

Query: 83 VNAEFLLEECLIGTLD 99
           +A  ++E+  +G +D
Sbjct: 66 ESAREMMEQYYVGEID 81

[Close]
BLAST of Cp4.1LG12g06600 vs. TAIR10
Match: AT5G48810.1 (AT5G48810.1 cytochrome B5 isoform D)

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 26/76 (34.21%), Postives = 46/76 (60.53%), Query Frame = 1 

Query: 23 RLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGGTEILMKAVGKDCTSLFDKYHAW 82
          ++  +SEV QH S    W V+ G+VY+++ ++  HPGG E+++ + GKD T  F+     
Sbjct: 6  KVFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFEDVGHS 65

Query: 83 VNAEFLLEECLIGTLD 99
            A+ +L+E  +G +D
Sbjct: 66 STAKAMLDEYYVGDID 81

[Close]
BLAST of Cp4.1LG12g06600 vs. NCBI nr
Match: gi|659122800|ref|XP_008461332.1| (PREDICTED: uncharacterized heme-binding protein C330.03c [Cucumis melo])

HSP 1 Score: 203.0 bits (515), Expect = 2.7e-49
Identity = 89/102 (87.25%), Postives = 98/102 (96.08%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLTRTHPDLA LKGQSNKRLIPMSEVK+H++EGSMWTVL+GRVYN+SPYMKFHPGG
Sbjct: 126 MDWLKLTRTHPDLAGLKGQSNKRLIPMSEVKEHRTEGSMWTVLKGRVYNISPYMKFHPGG 185

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRHR 103
            +ILMKAVGKDCTSLF+KYHAWVN EFLLE+CL+GTLDD HR
Sbjct: 186 ADILMKAVGKDCTSLFNKYHAWVNDEFLLEKCLVGTLDDSHR 227

[Close]
BLAST of Cp4.1LG12g06600 vs. NCBI nr
Match: gi|778728567|ref|XP_004135940.2| (PREDICTED: cytochrome b5 domain-containing protein RLF [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-48
Identity = 87/101 (86.14%), Postives = 97/101 (96.04%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLT+THPDLA LKGQSNKRLIPMSEVK+H++EGSMWTVL+G VYN+SPYMKFHPGG
Sbjct: 214 MDWLKLTQTHPDLAGLKGQSNKRLIPMSEVKEHRTEGSMWTVLKGHVYNISPYMKFHPGG 273

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRH 102
            +ILMKAVGKDCTSLF+KYHAWVNAEFLLE+CL+GTLDD H
Sbjct: 274 ADILMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLDDSH 314

[Close]
BLAST of Cp4.1LG12g06600 vs. NCBI nr
Match: gi|1021490005|ref|XP_016188017.1| (PREDICTED: cytochrome b5 domain-containing protein RLF [Arachis ipaensis])

HSP 1 Score: 195.7 bits (496), Expect = 4.3e-47
Identity = 84/101 (83.17%), Postives = 95/101 (94.06%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           MDWLKLTRTHPDLA LKGQSNKRLIPM EV++HQ+EG MWTVL+G VYN+SPYMKFHPGG
Sbjct: 127 MDWLKLTRTHPDLAGLKGQSNKRLIPMDEVRKHQTEGEMWTVLKGHVYNISPYMKFHPGG 186

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRH 102
            ++LMKAVGKDCTSLF+KYHAWVNAEFLLE+CL+GTLD+ H
Sbjct: 187 VDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLDESH 227

[Close]
BLAST of Cp4.1LG12g06600 vs. NCBI nr
Match: gi|641864788|gb|KDO83474.1| (hypothetical protein CISIN_1g029559mg [Citrus sinensis])

HSP 1 Score: 194.9 bits (494), Expect = 7.3e-47
Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           +DWL+LT+THPDLA LKGQSNKRLI M EVKQHQSEGSMWTVL+GRVYNLSPYMKFHPGG
Sbjct: 88  VDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRHRR 104
            ++LMKAVGKDCT+LF+KYHAWVNAEFLLE+CL+GTLDD   R
Sbjct: 148 VDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTLDDSRPR 190

[Close]
BLAST of Cp4.1LG12g06600 vs. NCBI nr
Match: gi|567893109|ref|XP_006439075.1| (hypothetical protein CICLE_v10032828mg [Citrus clementina])

HSP 1 Score: 194.9 bits (494), Expect = 7.3e-47
Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 1 

Query: 1   MDWLKLTRTHPDLAELKGQSNKRLIPMSEVKQHQSEGSMWTVLRGRVYNLSPYMKFHPGG 60
           +DWL+LT+THPDLA LKGQSNKRLI M EVKQHQSEGSMWTVL+GRVYNLSPYMKFHPGG
Sbjct: 88  VDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147

Query: 61  TEILMKAVGKDCTSLFDKYHAWVNAEFLLEECLIGTLDDRHRR 104
            ++LMKAVGKDCT+LF+KYHAWVNAEFLLE+CL+GTLDD   R
Sbjct: 148 VDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTLDDSRPR 190

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g06600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF_ARATH1.1e-4275.76Cytochrome b5 domain-containing protein RLF OS=Arabidopsis thaliana GN=RLF PE=2 ... [more]
NB5R4_XENTR4.6e-2550.49Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1[more]
NB5R4_BOVIN1.5e-2349.49Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1[more]
NB5R4_DANRE1.5e-2350.51Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1[more]
NB5R4_HUMAN1.5e-2349.49Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1[more]
BLAST of Cp4.1LG12g06600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K899_CUCSA1.6e-4886.14Uncharacterized protein OS=Cucumis sativus GN=Csa_7G426500 PE=3 SV=1[more]
A0A067L554_JATCU5.1e-4786.87Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16844 PE=3 SV=1[more]
V4TL01_9ROSI5.1e-4783.50Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032828mg PE=3 SV=1[more]
A0A067GV17_CITSI5.1e-4783.50Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029559mg PE=3 SV=1[more]
B9GFC2_POPTR1.9e-4687.76Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s27100g PE=3 SV=1[more]
BLAST of Cp4.1LG12g06600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09680.16.1e-4475.76 reduced lateral root formation[more]
AT5G53560.16.2e-1231.65 cytochrome B5 isoform E[more]
AT1G26340.16.2e-1237.66 cytochrome B5 isoform A[more]
AT2G32720.11.4e-1131.58 cytochrome B5 isoform B[more]
AT5G48810.11.4e-1134.21 cytochrome B5 isoform D[more]
BLAST of Cp4.1LG12g06600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122800|ref|XP_008461332.1|2.7e-4987.25PREDICTED: uncharacterized heme-binding protein C330.03c [Cucumis melo][more]
gi|778728567|ref|XP_004135940.2|2.3e-4886.14PREDICTED: cytochrome b5 domain-containing protein RLF [Cucumis sativus][more]
gi|1021490005|ref|XP_016188017.1|4.3e-4783.17PREDICTED: cytochrome b5 domain-containing protein RLF [Arachis ipaensis][more]
gi|641864788|gb|KDO83474.1|7.3e-4783.50hypothetical protein CISIN_1g029559mg [Citrus sinensis][more]
gi|567893109|ref|XP_006439075.1|7.3e-4783.50hypothetical protein CICLE_v10032828mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
Vocabulary: INTERPRO
TermDefinition
IPR018506Cyt_B5_heme-BS
IPR001199Cyt_B5-like_heme/steroid-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010311 lateral root formation
biological_process GO:0006040 amino sugar metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0020037 heme binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0043531 ADP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g06600.1Cp4.1LG12g06600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001199Cytochrome b5-like heme/steroid binding domainPRINTSPR00363CYTOCHROMEB5coord: 85..97
score: 5.0E-7coord: 57..71
score: 5.0E-7coord: 47..57
score: 5.
IPR001199Cytochrome b5-like heme/steroid binding domainGENE3DG3DSA:3.10.120.10coord: 21..102
score: 1.5
IPR001199Cytochrome b5-like heme/steroid binding domainPFAMPF00173Cyt-b5coord: 27..97
score: 2.3
IPR001199Cytochrome b5-like heme/steroid binding domainSMARTSM01117Cyt_b5_2coord: 25..98
score: 2.8
IPR001199Cytochrome b5-like heme/steroid binding domainPROFILEPS50255CYTOCHROME_B5_2coord: 22..98
score: 21
IPR001199Cytochrome b5-like heme/steroid binding domainunknownSSF55856Cytochrome b5-like heme/steroid binding domaincoord: 21..103
score: 1.18
IPR018506Cytochrome b5, heme-binding sitePROSITEPS00191CYTOCHROME_B5_1coord: 53..60
scor
NoneNo IPR availablePANTHERPTHR19370NADH-CYTOCHROME B5 REDUCTASEcoord: 1..98
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g06600Cucsa.128040Cucumber (Gy14) v1cgycpeB0334
Cp4.1LG12g06600CmaCh17G009660Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g06600CmaCh08G005150Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g06600CmoCh08G005070Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g06600Cla015259Watermelon (97103) v1cpewmB136
Cp4.1LG12g06600Csa7G426500Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g06600ClCG09G003970Watermelon (Charleston Gray)cpewcgB130
Cp4.1LG12g06600CSPI07G19060Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g06600Lsi02G025540Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g06600CsaV3_7G030870Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g06600Bhi09G000557Wax gourdcpewgoB0201
Cp4.1LG12g06600CsGy7G017440Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g06600Carg13430Silver-seed gourdcarcpeB0631
Cp4.1LG12g06600Carg18663Silver-seed gourdcarcpeB0493
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g06600Cp4.1LG17g07910Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g06600Wax gourdcpewgoB0171
Cp4.1LG12g06600Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g06600Cucurbita pepo (Zucchini)cpecpeB185
Cp4.1LG12g06600Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g06600Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g06600Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g06600Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g06600Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g06600Wild cucumber (PI 183967)cpecpiB138
Cp4.1LG12g06600Cucumber (Chinese Long) v2cpecuB137
Cp4.1LG12g06600Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g06600Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g06600Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g06600Watermelon (97103) v1cpewmB131
Cp4.1LG12g06600Watermelon (97103) v1cpewmB141
Cp4.1LG12g06600Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g06600Melon (DHL92) v3.5.1cpemeB133
Cp4.1LG12g06600Cucumber (Gy14) v2cgybcpeB308
Cp4.1LG12g06600Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g06600Melon (DHL92) v3.6.1cpemedB160
Cp4.1LG12g06600Silver-seed gourdcarcpeB1070
Cp4.1LG12g06600Cucumber (Chinese Long) v3cpecucB0158