Carg13430 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAACTTAACCATGGTCAGCAACCGCGTCACCGTCGGCTCAAGTTGGCCAATCACCCGCCACCGATTTTGTACGCAATAAACCATATTCTTCTTTAATTTCTCCGTCGCTTTTTCTCGACGAGATTGGGTATCGAATTCCGTTGAAAAGCTTCGTCGTCAACGGGCAGCCGGCGTGTTGACGGTCTTTTCCGATTCAGTAAGTTTTCGATTCGTGAGGGTTCTCTAAGTTTCTGACCACTATTTTCTGGCTTGAATTACGATTTCATACAAATGCATGAATAAGTTAATATTCTTCTCTAGTTTCTTGAGATTTCTTCTGTCGATTCTTCATTTACGTCCATTTACGTCCATTTCCTTCAGTTCCGATTCTGTTTTTTTAAACGATCCAGGTAGTGTGAACTTTGATGTCTTTTGCCTCTCTGCTATGTTTTTCCTTCGTTGTGAATTCCTCCTACTCTCCTCTTCTGTGCTTTAGTCTGAATCTAAACTAGTATGGAGCTTATTAATTCTCTTGTCATGTCGTGATTCGATTTTTTTTTTTTTTTTTTTTTCATTTTCCCCCTTTCCTTCCGATTTTGGATCTCGGATTACGATTTTCTTCTGTTTTATACGATTAAACGAGAAACGGACGATTCGACGAAATTGGAGTTAGAAACACGCTTTGAATCATCCGCTGTGCGAGTTTAGCAACATTTCTGTTCATTTTAGTTGTGGTTAGGTGGTAAATTGGCGTAGTTCTCGAATCAAAACGCATTACCCCCTCCATTCCTATGATAAATTTGAGGTATCGATTTGGTTGCTGGAGGGACGAATATCGAGAATCTCCATAGATTAATTAATTTGTTTACTTTTCTCACCTTTTCTTTCACAAGATGATAATAATATATATATCCTTCAAAGGGCAAGATTAATTACTGATGTTGTACAATGAGTCTTAATGTGCTGATTTAGAAGTTTAAGCATGGTCCCTTTCTTTCATGGAGTGGAGTTACGGATTATTCAGGACAAAAAACCATTGGTTTCAGGTTTTATTGCTTATTTCATCATCGCCTTTTTTTGTTGCCAGATAATATGGTAAATCTACTTTTTTCTTATCCCCCCTCCCTTGTATTTCTAATTGGTTGGAAGTAAAATAAGTTCACTCACTGTATTTCACTTTATTTGAAATCAATGTCAAATCTATCTGAAATCTATTGACTTCTGGTATTGAAATGCAGCAGAACAATTTCGAGTTGTGTTGTTGGATGAGAAAGGTTGCTTAAAATTTGAGACTAAATGACTGAGACGGATTCTGACAATGACTTCACATTTTGTCAGGCAAGTATAATTTTTATGCTATAAAATTAGGTTATAAGTTTTCAATTCAATGACATGTTTCCTTTTTTCTATCAATTCGCCTTCTACAGTTGTTATAATGTTTGACACCCAACCTAAGTTATATTACTATTACTGTTATATGAATATATTAGTAGGTGGGTTTACCTGAAAAAGATGATAAAGAGGCAAAGGATCTTGCATATGACATAGGTGATATTACCTTAAGGGATGATTGGACAAATGGTGCCGTCAGTAGGACGAATGTCATTTGGGATGATAATTTGTCAAATGATATCACTTCCAGAAAGCAGGCAACAGTGGGTTCCTTGCATTTCAATGTTACTGATATGTCGTCTTCAAAACAATCAAGCACACAGTCAACAGAAAAGGTGCCAAAAGATGCTGAGAAAGTTGCGAAGGTTTCAGGAAAACAAGGGACTGCTGGGCGTAGGCCTGCAACCCGAACAAAGGTTCCTTTTGAAAAGGGGTATAGCCAAATGGATTGGCTTAAGCTTACTCGAACCCATCCTGATCTTGCAGGTACTTGTGGTGTTATGAAACTCTTAGAATTTGATCTTAGAATCTTATTGAACTTTAGTATGTAACGATTTAGTTCTTGTACTTTCAAATTTGGTACAATTTAATCCCTATAGTAAAAAATTCTATCAAAATTAAGTTTATGTAACCACTTAGTCTTTGTAGTTTATAGAAACACTTAGTTTCTAGTGAGTCTATCCATCTATATATATTACAAATCCCATTAAATCTTAACAAATTTTAACATAGGATTCAATTTCTAGGAAATTGGCGGTACAAAGGTTGACTAGTAGAAACTAAAGTTCAAGGGACTGAAAGTGTTTTCTTAAACCTTAATCTTATAACCTTGGCACATATGTTGATGCTTGTTTGGGCTAATTAGAGGATACAAATTGTTTGCAACTAGTTGCTTCTTGGCATGTTCAGGGTTCAGAAAAGCTTCTAAAGATCTATAGTATCCAAATTATAAACTTCACGGAGGATCCACTTGTCATTTACGTTTGTGTTTGTAACAATATTAATATGATAGTTATTATTTGTGTTGCAAAATAGGACACTTCTATTGTCTTCAACATTACTGGTAATTTAATGTTATAAATTCTTATCCCGAGAAATTAATGCAACTGATTTTCAACATTTGTTTTATAATTGTGAATTAGGATTGAAAGGCCAGTCAAATAAAAGGCTTATCCCTATGAGTGAAGTTAAAGAACATCAGACCGAGGGCTCGATGTGGACTGTTCTGAAGGGTCGTGTGTACAACATATCTCCTTACATGAAGTTTCACCCTGGAGGTATGGGCATCCACAATTTTTCTATATTTAATTTTTTCAGTGAATTTGTTATCCATCTGGTTGTAGTCAGTGTGTCTCTGAGGACCCTAGAGTTGGTAAAGTAGCATGACTAGATTTGTAATGCATGTTATGGTGTCTTGTGTTCCCGTATAACTTCTAATATTTTATATTTAAGATGGGCCACAGTATCATGTTGTTAAATTCTGTGTAGGATGATTATTCTCCTTTATTCACGACCTAGGTTACTCATAAATACTAGAGGTCACTCATAAATACTAGCTTCTAGTCCTACTTATATGTTACTGGTCTATTCTCATGCATAACTTCTAGTTATTATTTGGGTTGAGATTCTTGCAATGCATGTTTTAACTGATGCTGAGACGCATTAGATTACATCATAGGCATTTTCTTTTGGGTAGACTTGAAGTATTTGACCTCTTGACAAACTTCTTTATCAGGTGCTGATATACTCATGAAAGCAGTGGGAAAAGATTGTACATCTTTATTCAGTATCCTTGGAATTTGGTTTAGTTTTTTTTGGTTGAAAAGTATCACTTCTTCCTCTATGGAATTTTACTGTTGCCACCTACACCTAGTTAATTTTCCATGCAATTTCAATTTGCTTATTTAATGAATCCTGAATTGGTGTCAAAAAGTTGTCCTTAAACAACCTTCAGATAAATACCATGCATGGGTGAATGCTGAATTTTTGTTGGAGAAGTGTTTGGTTGGCACTTTGGATAATAGTCATTGACAGTTTTATGGCATGTAGCCTTGACCATGTCTAGATGGTGTGTTGCATTGCACAAGTAGTCAAAGATTTGGTATCAGAATGTGTTGGGAACGAACTTACTTGAAGGTTCGAAGGTTCGAAGGTTCCGAGCAACGATAGTATGCACACTTGAATTTGATTTTCAATTAACTTCTAAGATATATTACCTATTCTTAAGCATAGAAAGTTAGGTATTTTCTGGATATTGCAGGGCACAAACCAAATAAAAATCTTGACGGACAATGTTTATATCTATATATTGTGACTATCCAAGAATCTCTTGTGCACCAGGACCAACTATTTGGTTATCCTTATCTTGAAGTTCATAAGATTTTGATATTCTGGATTGGTAAGCACTATACACAATGAGATCTTGAATCTTTTTCTCAACCTTTTGAGTTTATTTCCAACCATATTGGTTGAAGATAAAAGAGGCGACACAATGTTTGATTTTGGAAAAAAAAAC ATGGTTAACTTAACCATGGTCAGCAACCGCGTCACCGTCGGCTCAAATTGGGTATCGAATTCCGTTGAAAAGCTTCGTCGTCAACGGGCAGCCGGCGTGTTGACGGTCTTTTCCGATTCAGTGGGTTTACCTGAAAAAGATGATAAAGAGGCAAAGGATCTTGCATATGACATAGGTGATATTACCTTAAGGGATGATTGGACAAATGGTGCCGTCAGTAGGACGAATGTCATTTGGGATGATAATTTGTCAAATGATATCACTTCCAGAAAGCAGGCAACAGTGGGTTCCTTGCATTTCAATGTTACTGATATGTCGTCTTCAAAACAATCAAGCACACAGTCAACAGAAAAGGTGCCAAAAGATGCTGAGAAAGTTGCGAAGGTTTCAGGAAAACAAGGGACTGCTGGGCGATTGAAAGGCCAGTCAAATAAAAGGCTTATCCCTATGAGTGAAGTTAAAGAACATCAGACCGAGGGCTCGATGTGGACTGTTCTGAAGGGTCGTGTGTACAACATATCTCCTTACATGAAGTTTCACCCTGGAGGTGCTGATATACTCATGAAAGCAGTGGGAAAAGATTGTACATCTTTATTCAATAAATACCATGCATGGGTGAATGCTGAATTTTTGTTGGAGAAGTGTTTGGTTGGCACTTTGGATAATAGTCATTGACAGTTTTATGGCATGTAGCCTTGACCATGTCTAGATGGTGTGTTGCATTGCACAAGTAGTCAAAGATTTGGTATCAGAATGTGTTGGGAACGAACTTACTTGAAGGTTCGAAGGTTCGAAGGTTCCGAGCAACGATAGTATGCACACTTGAATTTGATTTTCAATTAACTTCTAAGATATATTACCTATTCTTAAGCATAGAAAGTTAGGTATTTTCTGGATATTGCAGGGCACAAACCAAATAAAAATCTTGACGGACAATGTTTATATCTATATATTGTGACTATCCAAGAATCTCTTGTGCACCAGGACCAACTATTTGGTTATCCTTATCTTGAAGTTCATAAGATTTTGATATTCTGGATTGGTAAGCACTATACACAATGAGATCTTGAATCTTTTTCTCAACCTTTTGAGTTTATTTCCAACCATATTGGTTGAAGATAAAAGAGGCGACACAATGTTTGATTTTGGAAAAAAAAAC ATGGTTAACTTAACCATGGTCAGCAACCGCGTCACCGTCGGCTCAAATTGGGTATCGAATTCCGTTGAAAAGCTTCGTCGTCAACGGGCAGCCGGCGTGTTGACGGTCTTTTCCGATTCAGTGGGTTTACCTGAAAAAGATGATAAAGAGGCAAAGGATCTTGCATATGACATAGGTGATATTACCTTAAGGGATGATTGGACAAATGGTGCCGTCAGTAGGACGAATGTCATTTGGGATGATAATTTGTCAAATGATATCACTTCCAGAAAGCAGGCAACAGTGGGTTCCTTGCATTTCAATGTTACTGATATGTCGTCTTCAAAACAATCAAGCACACAGTCAACAGAAAAGGTGCCAAAAGATGCTGAGAAAGTTGCGAAGGTTTCAGGAAAACAAGGGACTGCTGGGCGATTGAAAGGCCAGTCAAATAAAAGGCTTATCCCTATGAGTGAAGTTAAAGAACATCAGACCGAGGGCTCGATGTGGACTGTTCTGAAGGGTCGTGTGTACAACATATCTCCTTACATGAAGTTTCACCCTGGAGGTGCTGATATACTCATGAAAGCAGTGGGAAAAGATTGTACATCTTTATTCAATAAATACCATGCATGGGTGAATGCTGAATTTTTGTTGGAGAAGTGTTTGGTTGGCACTTTGGATAATAGTCATTGA MVNLTMVSNRVTVGSNWVSNSVEKLRRQRAAGVLTVFSDSVGLPEKDDKEAKDLAYDIGDITLRDDWTNGAVSRTNVIWDDNLSNDITSRKQATVGSLHFNVTDMSSSKQSSTQSTEKVPKDAEKVAKVSGKQGTAGRLKGQSNKRLIPMSEVKEHQTEGSMWTVLKGRVYNISPYMKFHPGGADILMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLDNSH
BLAST of Carg13430 vs. NCBI nr
Match: XP_023004645.1 (cytochrome b5 domain-containing protein RLF [Cucurbita maxima] >XP_023004646.1 cytochrome b5 domain-containing protein RLF [Cucurbita maxima]) HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90 Identity = 175/215 (81.40%), Postives = 179/215 (83.26%), Query Frame = 0
BLAST of Carg13430 vs. NCBI nr
Match: XP_022960400.1 (cytochrome b5 domain-containing protein RLF-like [Cucurbita moschata] >XP_022960401.1 cytochrome b5 domain-containing protein RLF-like [Cucurbita moschata]) HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86 Identity = 175/215 (81.40%), Postives = 176/215 (81.86%), Query Frame = 0
BLAST of Carg13430 vs. NCBI nr
Match: XP_023515005.1 (cytochrome b5 domain-containing protein RLF-like [Cucurbita pepo subsp. pepo] >XP_023515006.1 cytochrome b5 domain-containing protein RLF-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83 Identity = 170/215 (79.07%), Postives = 172/215 (80.00%), Query Frame = 0
BLAST of Carg13430 vs. NCBI nr
Match: XP_004135940.2 (PREDICTED: cytochrome b5 domain-containing protein RLF [Cucumis sativus] >KGN45109.1 hypothetical protein Csa_7G426500 [Cucumis sativus]) HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76 Identity = 155/215 (72.09%), Postives = 163/215 (75.81%), Query Frame = 0
BLAST of Carg13430 vs. NCBI nr
Match: XP_008461332.2 (PREDICTED: disease resistance protein RGA2 [Cucumis melo]) HSP 1 Score: 293.5 bits (750), Expect = 6.1e-76 Identity = 153/215 (71.16%), Postives = 162/215 (75.35%), Query Frame = 0
BLAST of Carg13430 vs. TAIR10
Match: AT5G09680.1 (reduced lateral root formation) HSP 1 Score: 179.5 bits (454), Expect = 2.3e-45 Identity = 101/193 (52.33%), Postives = 119/193 (61.66%), Query Frame = 0
BLAST of Carg13430 vs. TAIR10
Match: AT1G26340.1 (cytochrome B5 isoform A) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Carg13430 vs. TAIR10
Match: AT5G53560.1 (cytochrome B5 isoform E) HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12 Identity = 25/81 (30.86%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of Carg13430 vs. TAIR10
Match: AT2G32720.1 (cytochrome B5 isoform B) HSP 1 Score: 68.6 bits (166), Expect = 5.8e-12 Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of Carg13430 vs. TAIR10
Match: AT3G61580.1 (Fatty acid/sphingolipid desaturase) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-11 Identity = 25/73 (34.25%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of Carg13430 vs. Swiss-Prot
Match: sp|Q9LXD1|RLF_ARATH (Cytochrome b5 domain-containing protein RLF OS=Arabidopsis thaliana OX=3702 GN=RLF PE=2 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.2e-44 Identity = 101/193 (52.33%), Postives = 119/193 (61.66%), Query Frame = 0
BLAST of Carg13430 vs. Swiss-Prot
Match: sp|Q32LH7|NB5R4_BOVIN (Cytochrome b5 reductase 4 OS=Bos taurus OX=9913 GN=CYB5R4 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of Carg13430 vs. Swiss-Prot
Match: sp|Q7L1T6|NB5R4_HUMAN (Cytochrome b5 reductase 4 OS=Homo sapiens OX=9606 GN=CYB5R4 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of Carg13430 vs. Swiss-Prot
Match: sp|Q502I6|NB5R4_DANRE (Cytochrome b5 reductase 4 OS=Danio rerio OX=7955 GN=cyb5r4 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17 Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of Carg13430 vs. Swiss-Prot
Match: sp|Q28CZ9|NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis OX=8364 GN=cyb5r4 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17 Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Carg13430 vs. TrEMBL
Match: tr|A0A0A0K899|A0A0A0K899_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426500 PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 8.1e-77 Identity = 155/215 (72.09%), Postives = 163/215 (75.81%), Query Frame = 0
BLAST of Carg13430 vs. TrEMBL
Match: tr|A0A1S3CEH4|A0A1S3CEH4_CUCME (disease resistance protein RGA2 OS=Cucumis melo OX=3656 GN=LOC103499949 PE=3 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 4.0e-76 Identity = 153/215 (71.16%), Postives = 162/215 (75.35%), Query Frame = 0
BLAST of Carg13430 vs. TrEMBL
Match: tr|B9GFC2|B9GFC2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G263800v3 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.9e-51 Identity = 119/215 (55.35%), Postives = 141/215 (65.58%), Query Frame = 0
BLAST of Carg13430 vs. TrEMBL
Match: tr|A0A2I4ECD7|A0A2I4ECD7_9ROSI (cytochrome b5 domain-containing protein RLF-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108988284 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.4e-50 Identity = 115/216 (53.24%), Postives = 144/216 (66.67%), Query Frame = 0
BLAST of Carg13430 vs. TrEMBL
Match: tr|A0A2I4ECC9|A0A2I4ECC9_9ROSI (cytochrome b5 domain-containing protein RLF-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108988284 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.4e-50 Identity = 115/216 (53.24%), Postives = 144/216 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |