Cp4.1LG12g05310 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g05310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlutaredoxin
LocationCp4.1LG12 : 8147654 .. 8147968 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATGAATGCAGTGAAAGGGTTGGTGGCCGAGAAGCCAGTAGTGATCTTCAGTAGAAGCCAATGCTCGATGAGCTATACAGTAAAGACACTCATATCAAGCTTTGGGGCTAATCCTACAGTGTATGAGCTTGATGAGATACCCAATGGGCATCAGATTGAGACACTGCTGCTTCAACTAGGATGCGAGCCATGTGTGCCTGTTGTGTTCATTGGGCAGAAGTTAATTGGTGGTGCTAGAGAGCTCATGAGCCTGCAGGTCAGGAACGAGCTTATGCCATTGCTCATGAGTGCCAGAGCTATATGGGTTTGA

mRNA sequence

ATGGATATGAATGCAGTGAAAGGGTTGGTGGCCGAGAAGCCAGTAGTGATCTTCAGTAGAAGCCAATGCTCGATGAGCTATACAGTAAAGACACTCATATCAAGCTTTGGGGCTAATCCTACAGTGTATGAGCTTGATGAGATACCCAATGGGCATCAGATTGAGACACTGCTGCTTCAACTAGGATGCGAGCCATGTGTGCCTGTTGTGTTCATTGGGCAGAAGTTAATTGGTGGTGCTAGAGAGCTCATGAGCCTGCAGGTCAGGAACGAGCTTATGCCATTGCTCATGAGTGCCAGAGCTATATGGGTTTGA

Coding sequence (CDS)

ATGGATATGAATGCAGTGAAAGGGTTGGTGGCCGAGAAGCCAGTAGTGATCTTCAGTAGAAGCCAATGCTCGATGAGCTATACAGTAAAGACACTCATATCAAGCTTTGGGGCTAATCCTACAGTGTATGAGCTTGATGAGATACCCAATGGGCATCAGATTGAGACACTGCTGCTTCAACTAGGATGCGAGCCATGTGTGCCTGTTGTGTTCATTGGGCAGAAGTTAATTGGTGGTGCTAGAGAGCTCATGAGCCTGCAGGTCAGGAACGAGCTTATGCCATTGCTCATGAGTGCCAGAGCTATATGGGTTTGA

Protein sequence

MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLGCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Homology
[Close]
BLAST of Cp4.1LG12g05310 vs. Swiss-Prot
Match: GRXS1_ARATH (Monothiol glutaredoxin-S1 OS=Arabidopsis thaliana GN=GRXS1 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-30
Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M  +  L+ +KPVVIFS++ C MS+++K+LIS +GAN TVYELDE+ NG +IE  L++LG
Sbjct: 1   MEKISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C+P VP VFIGQ+L+GGA +LMSLQVRN+L  LL  A AIW+
Sbjct: 61  CKPTVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102

[Close]
BLAST of Cp4.1LG12g05310 vs. Swiss-Prot
Match: GRXS6_ARATH (Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana GN=GRXS6 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-29
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M +V+ LV +KPVVIFS+S C MS++++TLIS FGA  TVYELD+  NG +IE  L+Q+G
Sbjct: 1   MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C+P VP VFIGQ+ IGGA ++M+LQV+N+L  +L  A AIWV
Sbjct: 61  CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102

[Close]
BLAST of Cp4.1LG12g05310 vs. Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.3e-28
Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M+ +  +V E+PVVI+S+S C MS+T+KTL+  FGANP VYELDEI  G +IE  LL+LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VP VFIG +L+GGA E+MSL +   L+P+L  A A+WV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of Cp4.1LG12g05310 vs. Swiss-Prot
Match: GRXS5_ARATH (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M  ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G +IE  L QLG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VPVVFIG +L+GGA ++MSL +   L+P+L  A A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of Cp4.1LG12g05310 vs. Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M+ ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G +IE  L QLG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VPVVFIG +L+GGA ++MSL +   L+P+L    A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of Cp4.1LG12g05310 vs. TrEMBL
Match: U3RJA5_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX8 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 4.7e-50
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 1 

Query: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           LGC+PCVP +FIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]
BLAST of Cp4.1LG12g05310 vs. TrEMBL
Match: A0A067H8Q0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039608mg PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-32
Identity = 70/100 (70.00%), Postives = 84/100 (84.00%), Query Frame = 1 

Query: 5   AVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLGCE 64
           AV  +VAE+PVVIFSRS CSMS+ +K LI SFGANPTVYELDEIPNG QIE  L+QLGC+
Sbjct: 4   AVTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQLGCQ 63

Query: 65  PCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           P VP VFIGQ+L+GGA+++MSLQV N+L  LL+ A AIW+
Sbjct: 64  PIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 103

[Close]
BLAST of Cp4.1LG12g05310 vs. TrEMBL
Match: A0A0D2PLU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G009100 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-32
Identity = 67/102 (65.69%), Postives = 85/102 (83.33%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M+ V  +VA++PVVIFSR+ C MS+T+KTLI+ FGANPTVYELDEI NG Q+E  L Q+G
Sbjct: 1   MDVVTSMVADRPVVIFSRTTCCMSHTIKTLINGFGANPTVYELDEIQNGQQVERELQQMG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VP VFIGQ+L+GGA ++MSLQ+RN+L+PLL SA AIW+
Sbjct: 61  CNPSVPAVFIGQRLVGGANQVMSLQLRNQLVPLLKSAGAIWI 102

[Close]
BLAST of Cp4.1LG12g05310 vs. TrEMBL
Match: B9S3V2_RICCO (Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_0555440 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.8e-32
Identity = 68/102 (66.67%), Postives = 83/102 (81.37%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M  V  LV EKPVVIFS+S C MS+T+K+LI  FGANPTVYELD IPNG QIE  L+QLG
Sbjct: 1   MEMVNRLVKEKPVVIFSKSSCCMSHTIKSLICGFGANPTVYELDRIPNGQQIERTLMQLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C+P VP VFIGQKL+GG +++MSL V+N+L+PLL+ A AIW+
Sbjct: 61  CQPSVPSVFIGQKLVGGEKQVMSLHVQNQLIPLLIDAGAIWI 102

[Close]
BLAST of Cp4.1LG12g05310 vs. TrEMBL
Match: B9I9V9_POPTR (Glutaredoxin family protein OS=Populus trichocarpa GN=POPTR_0014s12850g PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.6e-32
Identity = 70/103 (67.96%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIE-TLLLQL 62
           M+ V  LVA++PVV+FSRS C MS+++KTLISSFGANPTVYELD+IPNG QIE  L+ QL
Sbjct: 1   MDMVNRLVADRPVVVFSRSTCCMSHSIKTLISSFGANPTVYELDQIPNGKQIEKALVQQL 60

Query: 63  GCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           GC+P VP VFIGQ+ +GG +++MSLQVRNEL PLL  A AIW+
Sbjct: 61  GCQPSVPAVFIGQEFVGGDKQVMSLQVRNELAPLLRKAGAIWI 103

[Close]
BLAST of Cp4.1LG12g05310 vs. TAIR10
Match: AT1G03020.1 (AT1G03020.1 Thioredoxin superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 2.6e-31
Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M  +  L+ +KPVVIFS++ C MS+++K+LIS +GAN TVYELDE+ NG +IE  L++LG
Sbjct: 1   MEKISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C+P VP VFIGQ+L+GGA +LMSLQVRN+L  LL  A AIW+
Sbjct: 61  CKPTVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102

[Close]
BLAST of Cp4.1LG12g05310 vs. TAIR10
Match: AT3G62930.1 (AT3G62930.1 Thioredoxin superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-30
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M +V+ LV +KPVVIFS+S C MS++++TLIS FGA  TVYELD+  NG +IE  L+Q+G
Sbjct: 1   MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C+P VP VFIGQ+ IGGA ++M+LQV+N+L  +L  A AIWV
Sbjct: 61  CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102

[Close]
BLAST of Cp4.1LG12g05310 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 2.4e-29
Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M+ +  +V E+PVVI+S+S C MS+T+KTL+  FGANP VYELDEI  G +IE  LL+LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VP VFIG +L+GGA E+MSL +   L+P+L  A A+WV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of Cp4.1LG12g05310 vs. TAIR10
Match: AT4G15690.1 (AT4G15690.1 Thioredoxin superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-27
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M  ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G +IE  L QLG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VPVVFIG +L+GGA ++MSL +   L+P+L  A A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of Cp4.1LG12g05310 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-27
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M+ ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G +IE  L QLG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VPVVFIG +L+GGA ++MSL +   L+P+L    A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of Cp4.1LG12g05310 vs. NCBI nr
Match: gi|821595228|ref|NP_001295830.1| (monothiol glutaredoxin-S1-like [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 6.8e-50
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 1 

Query: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           LGC+PCVP +FIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]
BLAST of Cp4.1LG12g05310 vs. NCBI nr
Match: gi|743870506|ref|XP_011033597.1| (PREDICTED: monothiol glutaredoxin-S6-like [Populus euphratica])

HSP 1 Score: 145.2 bits (365), Expect = 6.4e-32
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIE-TLLLQL 62
           M+ VK LVA++PVV+FSRS C MS+ +KTLISSFGANPTVYELD+IPNG QIE  L+ QL
Sbjct: 1   MDMVKRLVADRPVVVFSRSTCCMSHAIKTLISSFGANPTVYELDQIPNGKQIEKALVQQL 60

Query: 63  GCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           GC+P VP VFIGQ  +GG +++MSLQVRNEL PLL  A AIW+
Sbjct: 61  GCQPSVPAVFIGQDFVGGDKQVMSLQVRNELAPLLRKAGAIWI 103

[Close]
BLAST of Cp4.1LG12g05310 vs. NCBI nr
Match: gi|568852444|ref|XP_006479886.1| (PREDICTED: monothiol glutaredoxin-S1 [Citrus sinensis])

HSP 1 Score: 145.2 bits (365), Expect = 6.4e-32
Identity = 70/100 (70.00%), Postives = 84/100 (84.00%), Query Frame = 1 

Query: 5   AVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLGCE 64
           AV  +VAE+PVVIFSRS CSMS+ +K LI SFGANPTVYELDEIPNG QIE  L+QLGC+
Sbjct: 4   AVTRMVAERPVVIFSRSSCSMSHAIKALICSFGANPTVYELDEIPNGRQIERELVQLGCQ 63

Query: 65  PCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           P VP VFIGQ+L+GGA+++MSLQV N+L  LL+ A AIW+
Sbjct: 64  PIVPAVFIGQQLVGGAKQVMSLQVTNQLSHLLIRAGAIWI 103

[Close]
BLAST of Cp4.1LG12g05310 vs. NCBI nr
Match: gi|823201603|ref|XP_012435630.1| (PREDICTED: monothiol glutaredoxin-S1 [Gossypium raimondii])

HSP 1 Score: 145.2 bits (365), Expect = 6.4e-32
Identity = 67/102 (65.69%), Postives = 85/102 (83.33%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M+ V  +VA++PVVIFSR+ C MS+T+KTLI+ FGANPTVYELDEI NG Q+E  L Q+G
Sbjct: 1   MDVVTSMVADRPVVIFSRTTCCMSHTIKTLINGFGANPTVYELDEIQNGQQVERELQQMG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C P VP VFIGQ+L+GGA ++MSLQ+RN+L+PLL SA AIW+
Sbjct: 61  CNPSVPAVFIGQRLVGGANQVMSLQLRNQLVPLLKSAGAIWI 102

[Close]
BLAST of Cp4.1LG12g05310 vs. NCBI nr
Match: gi|255559302|ref|XP_002520671.1| (PREDICTED: monothiol glutaredoxin-S1 [Ricinus communis])

HSP 1 Score: 144.8 bits (364), Expect = 8.3e-32
Identity = 68/102 (66.67%), Postives = 83/102 (81.37%), Query Frame = 1 

Query: 3   MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQLG 62
           M  V  LV EKPVVIFS+S C MS+T+K+LI  FGANPTVYELD IPNG QIE  L+QLG
Sbjct: 1   MEMVNRLVKEKPVVIFSKSSCCMSHTIKSLICGFGANPTVYELDRIPNGQQIERTLMQLG 60

Query: 63  CEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 105
           C+P VP VFIGQKL+GG +++MSL V+N+L+PLL+ A AIW+
Sbjct: 61  CQPSVPSVFIGQKLVGGEKQVMSLHVQNQLIPLLIDAGAIWI 102

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g05310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXS1_ARATH4.6e-3059.80Monothiol glutaredoxin-S1 OS=Arabidopsis thaliana GN=GRXS1 PE=3 SV=1[more]
GRXS6_ARATH3.0e-2958.82Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana GN=GRXS6 PE=3 SV=1[more]
GRXS2_ARATH4.3e-2856.86Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1[more]
GRXS5_ARATH1.8e-2653.92Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1[more]
GRXS4_ARATH1.8e-2652.94Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1[more]
BLAST of Cp4.1LG12g05310 vs. TrEMBL
Match NameE-valueIdentityDescription
U3RJA5_CUCSA4.7e-5097.12Glutaredoxin OS=Cucumis sativus GN=GRX8 PE=2 SV=1[more]
A0A067H8Q0_CITSI4.4e-3270.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039608mg PE=4 SV=1[more]
A0A0D2PLU4_GOSRA4.4e-3265.69Uncharacterized protein OS=Gossypium raimondii GN=B456_008G009100 PE=4 SV=1[more]
B9S3V2_RICCO5.8e-3266.67Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_0555440 PE=4 SV=1[more]
B9I9V9_POPTR7.6e-3267.96Glutaredoxin family protein OS=Populus trichocarpa GN=POPTR_0014s12850g PE=4 SV=... [more]
BLAST of Cp4.1LG12g05310 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03020.12.6e-3159.80 Thioredoxin superfamily protein[more]
AT3G62930.11.7e-3058.82 Thioredoxin superfamily protein[more]
AT5G18600.12.4e-2956.86 Thioredoxin superfamily protein[more]
AT4G15690.11.0e-2753.92 Thioredoxin superfamily protein[more]
AT4G15680.11.0e-2752.94 Thioredoxin superfamily protein[more]
BLAST of Cp4.1LG12g05310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|821595228|ref|NP_001295830.1|6.8e-5097.12monothiol glutaredoxin-S1-like [Cucumis sativus][more]
gi|743870506|ref|XP_011033597.1|6.4e-3268.93PREDICTED: monothiol glutaredoxin-S6-like [Populus euphratica][more]
gi|568852444|ref|XP_006479886.1|6.4e-3270.00PREDICTED: monothiol glutaredoxin-S1 [Citrus sinensis][more]
gi|823201603|ref|XP_012435630.1|6.4e-3265.69PREDICTED: monothiol glutaredoxin-S1 [Gossypium raimondii][more]
gi|255559302|ref|XP_002520671.1|8.3e-3266.67PREDICTED: monothiol glutaredoxin-S1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR012336Thioredoxin-like_fold
IPR011905GlrX-like_pln_2
IPR002109Glutaredoxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g05310.1Cp4.1LG12g05310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 15..77
score: 2.
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 3..103
score: 19
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 7..104
score: 1.6
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 4..103
score: 2.8
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 4..103
score: 8.27
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 60..73
score: 5.0E-5coord: 15..33
score: 5.0E-5coord: 74..87
score: 5.
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 3..104
score: 6.8
NoneNo IPR availablePANTHERPTHR10168:SF81MONOTHIOL GLUTAREDOXIN-S1-RELATEDcoord: 3..104
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g05310Cucsa.025260Cucumber (Gy14) v1cgycpeB0983
Cp4.1LG12g05310CmaCh17G011200Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g05310CmoCh17G010950Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g05310CmoCh08G003920Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g05310Cla014691Watermelon (97103) v1cpewmB131
Cp4.1LG12g05310Csa7G394610Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g05310MELO3C016053Melon (DHL92) v3.5.1cpemeB118
Cp4.1LG12g05310ClCG09G006310Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g05310CSPI07G17070Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g05310Lsi02G023630Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g05310MELO3C021350.2Melon (DHL92) v3.6.1cpemedB143
Cp4.1LG12g05310MELO3C016053.2Melon (DHL92) v3.6.1cpemedB145
Cp4.1LG12g05310Bhi01G000690Wax gourdcpewgoB0193
Cp4.1LG12g05310CsGy3G014170Cucumber (Gy14) v2cgybcpeB309
Cp4.1LG12g05310Carg07198Silver-seed gourdcarcpeB0158
Cp4.1LG12g05310Carg22160Silver-seed gourdcarcpeB1199
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g05310Cp4.1LG17g06820Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g05310Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g05310Wax gourdcpewgoB0187
Cp4.1LG12g05310Cucurbita pepo (Zucchini)cpecpeB193
Cp4.1LG12g05310Cucumber (Gy14) v1cgycpeB0669
Cp4.1LG12g05310Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g05310Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g05310Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g05310Cucurbita moschata (Rifu)cmocpeB336
Cp4.1LG12g05310Wild cucumber (PI 183967)cpecpiB140
Cp4.1LG12g05310Watermelon (97103) v1cpewmB153
Cp4.1LG12g05310Watermelon (97103) v1cpewmB160
Cp4.1LG12g05310Melon (DHL92) v3.5.1cpemeB144
Cp4.1LG12g05310Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g05310Silver-seed gourdcarcpeB1198