Cp4.1LG12g04920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g04920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSplicing factor u2af large subunit, putative
LocationCp4.1LG12 : 4789090 .. 4796045 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCCATGGTCACATCCTTTGTGCGAAGGCTAGTACTTAGAGACTGATATATAAGGAGAAGGATCTCTCTTCCGAGCCCTAGGATACTCGTTGGCGTGCTTCACCCAATTGCCTCGGGAATTTCAATTTCTCCCCAGAAAGATTTCCATATACCAGACCGAAACTCTGTGGATCATACACCAAATTCAAACATGACGGATTACGATGGGAGGTACGAAGGTAATGGGGAAGATGCAGACAACTATGGCGATGGTTTTTCTCCTCAAGCTCGTGGTGGCCACGACACTCACAGTGATTCGAAATCTCAGGTATTTTGTATTCGATTGATCCATGGCGATTCATTTGTTATATTACGGTTTTGCTGGGATTTGGGGGATCGATGGCAGTGCTGTTCCTAAGCTGAAAACATTCGTATTTTGTTTTCGGAGTCGAGTTCAATTATCGTGTTCTTTAGTTTCAGAAAACAGTGGAACTGTTGAAGTTCGACATTCTGTTGTAGTCTGTGTTTTGAAGGCTCTGCAAGACTGAAACATCACCTATAACCTTCCGTTTTGAGTCAATAAAATGACTTCAAGTTCCGTGATTTCAAATACTAATTTTTTATCTTGTTTGGAATGAAAACGTAATTAATTTTTTTGTTTGGATGTTTGCGTAAAAGAGAGACAAATTTTAGTAATTCAGCGTTCCAACCATGACTTGTTAACTGGAAATTCGAATATAACAAGCTTAAATCAGCAATTTATACTTACATTCTATGAAATCCGAAGGAATCTAGCCATTTTTGTCTTGAAAACTTACTAAGTGAAAACAAAATTTTAATTCATTCAGGGCTTTAAATCCTACTATTTTTCACGGATAAGAAACGCTGGAATTCGTTTGAAACCATTAGTATTTGAAGTTACTCTAAATCTTTGAGATATGGACAGACCAAGTTAACTCTTGGTGATTTTTTTTGTTCATTGTGAGACAATGTGTAGTTGAGGTTAGGCAATTGGGTGGATTGTGGGAATTGGTTCTGTTTCTACTGTTCTTCCCTTTTTCCCCACTCAAGTTGGAAGTTTTTCTTGTATTCTATTCCTTAGCTTGGGTTGAGGTTTTCCTCCCCTCCTCTTTTATATTTAATTTTATGAATGAAATGGTTTTTTATATAGTAAAAGATTATGAAGAAACCAAAATCTCACTGACAAACCATTCTTTTACAGCATGGTTCCCGAGAATATGAAAGGGAATCTTCAAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGGGATAGGGAGAAGGACAGGGAGAGGGATCGGGACCGAGGTAGAGAAAGGGATAGGGAGAAAAGCAAGGATGGGGAAAGAGACCGGGAGAAAGACAGGGATAGGGATCGTGACAAGGACCGTGATAGGGATCGTGACCGTCATCATAGAGACCGCCATAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAAGTAGAGATGATGATGATTACTACAGGAGTAGAGACTACGACAGGTAATGGATTCCGTATTGATTTGCCCAGCTTCTTGTTCATAATGCATTATTGGCTCTTACCTTATGCACTGTAGGGATTTAGGGATTTATGTTGGGTTAAATTTATTTTATCAATGGAAATTAAATTGACTTATTTCATTTATAGGCGGAGAGACTATGATAAAGAACGAGAAGACAGACATAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACCTGAACATAGGTCAAGATCCCCTTCTCCAACGCGGTCAAGATCACGCTCCAAAAGGTTGGATATGAAAGTTAATAGCTATATTTTTCTTGTATACAATTTCTCTGTACGTCCATCTGAAGTCTATGCGTGGAAAATTAGTAGGTTCAAATAGTTTGAATTTTTACTGAATTTATATTGCTTTACGGGGGAGTTTAGCAGATGTTAAATATGAGCAGTAAGATGTTAAATATGAGCAGTAAGATCATATGTTACGGATTAATATGTTGTTATGTAAGTGAACTGTATGGTTTTTGTTGAGATATTGAAGAACTGTCTTCAGTCATGGTTTGAAATGTAAAAGGTTTAATTGTCATGAACTTGTGGTTCTCTGGCATTTCTCCAACTACATTCATCTTTTTTTTTTTTTTGTTATTTTTTTGCAGTTTCCTTTTGTTGAATAATTGCAATATTGCTTTACCCTCGTTTATTGAGGATGAGATTGACACTACTATTTTGTCCATAAGAAGCTTCGCAATTTTTGGCCTTTCTTTGGTTTGTGCCTATTGGAGTGGCCTTTACCTATGTATCTCATTCTTTTCCATGATTTTTTCTTTTGAAAAGTCTGAGACAGAGGAATGATTAGAGCAGTAGGTTAGTATGTGGAATGTTTGGAAATATAGTTCTGCCATTCATTTTTCTCAATATATTTAGAGTTATATTTTCCTCTGGACCATAAATAATTGTTAATTTATTCTTCTAAGTTCTAATTTGTCATGGATATATAAGGGATGTTCACATTATTAATTTGAGCAGTGTAGCTGGGTATTTTTTCAAAAGAAAGTTAATGGTTTGCAATCGTGCATCCACACAATATTTTAATGTGAGCGACAAGCTATCATTATTTGGTTTCTTTAGTGCTCTGTATGTTACATAGATTTCTGGTCTATTTGTAGTTTATGTTGAATTCTTCTGCATCATACAAGTTGTTTGTCTCTCCTGGTTATGAAATTTCATGGTTTATCACCTTTCCTGCTTCTTTTGTCTTTGAACTTGTTATGCTAATATATCTTTCTCTGCAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCCACTACTGCAATATTACCTGGTGCAACTGCTGTTGCAGGTACCTAAATCCTTATGAACAGGAATATCCTTCTGTATTATTTAACTGCTTTTCTTTGTTGAATATAGTGTGGAAAGTTGACAACAAATTGCATGGTGTCATTGGGTAAGCTATATTTTGTTCCTTCATCGCATATGTAGTCATTTAAAAAATGTGGTCTTTGGATGGGCTATGCTATTATTTATTATTTACTTGGTACACTCATTCTGAAACTGAGAGGTATTTTGGTTTTTTGTTGCTTGTGTTTGGTGTTTGTTTGTTGTTTTGTTTCTATGTCTCGTCCAATTTTGTGAGAAGGCAATGTTGGACTACTTGCCCCTCTGTGCTGACCATGGGCGTGAGCTGACATCTGTAGCTTTTATGTGCAAGAAGGACCAATGCACCGGTTAGATGGATCTTGTTCGTCCTCATCTGGAAACTTTTTCCTTTTTGGGTAGTCTTACAAATATTTCTCAGAATTTGTACATGCATTAAATTTGTATGCTAAAAAATTTATTGGAAGAGGCTAAGTTACATCACATTGAGTTTCCTGAAGCATGAAGTAGGTTCAGGTGAACTTGAATCTTATGTGTATGCGAATGTTGTTGACTTGAATTGTGATTATTTTCTTTGATTTAGCCTAATTTCTTTAGCAGGTCAGATTCCCGGGACAACTCCAGCAATTCCTGGAATGTTTCCTACCATGTTTCCTCTGGCAACGGGTCAGGTAACTCTACTTCTCCCATATTAAATAGAATGGAATAATACAAAATCCTTAGGCAAATGACATTAATTATTTGATAGAAGTATATATTCATCATTTACATTGTTTTTCCTTTTATTTGTTTTCATGCAGCCCTTTGGAGCACTTCCTGTAATGCCGGTTCAGGCAATGACTCAACAGGTATCAATTCAGTGCTGTTGTACGTCTCTTTTTTTGGTTGTACACTTTAAGTTGGGCATTAAGACTTATGGTGCGTGTTCTGTTTTTAGGCTACTAGACATGCACGGCGGGTTTATGTGGGAGGGCTACCACCAACAGCCAACGAACAGGTTTTTTGCACTTCTTGTTGCTCTTTTTTTATTGACATTTTATTATATAATTTAATATTTGAAGTCCGTATCTTCATATATATTCTTGTCTGGAGTTCACCATTTGTGCATCCGATTGCAGGTTTTTAGCTTATTTATTTTGTTAAGGTTTTGGTTTCTTGTAACTTTTTGATTCTGCATTGCCAAATGCAAATGTCATCCTCTGTTGACTTACCAAATAAAAGTTTGAAAAACTTATCACTCTTGGCTATGTTTATTCCTCTCCCTTTCTCACGACCAGTGCCGATAACCTTGGCAGACTTTTCCTTCTTCATTTTCCATGTTTTTTTTTTCCTCTAATTGGCCAAGCCATACTGGAAAGTTTTCTCATATAACAGCCAACTGCATTTATTCACAAAGGTCATTTGTTGTTTGCAGTCTGTTGCCACATTTTTCAGCCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGCCCTGGTATGGTGATTTTTTATTACTGTTCATAGGTTTAACTGTCTGGATTGTTTGCCAAATCAACTTGTTTAACTCATACGTTGGCTGTCTATCACTTATAGGAGATGCGGTTGTTAATGTTTATATAAATCATGAGAAAAAGTTTGCTTTTGTTGAGATGAGATCTGTTGAGGAAGCCAGTAATGCCATGGCCTTGGATGGGATCATCTTTGAGGTACTTAGTTTGCCATTGACTATTTTATATGCATAAAATGTTAGAACAAAATTTATTGTGGAAAATATTTTTCTTATTTGTTACTATTGTTCAAATTAGGGAGCGCCTGTTAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACGCTTGGTCCCAGCCAGCCAAGCCCCAATCTGAACCTAGCTGCCGTTGGTCTAACACCAGGTTCAGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTCCGAGAGTTGCTGGAGTCTTTTGGGCCCCTTCGAGGTTTTGATCTGGTGAAAGATAGAGAGACGGGAAATTCCAAAGGCTATGCATTTTGTGTTTACCAAGATCTTTCAGTCACTGACATAGCCTGTGCAGCCCTCAACGGTATTAAAATGGGTGATAAGACGCTCACTGTTCGGCGTGCAAATCAAGGAACCAACCAACCCAAACCAGAGCAAGAAAGTGTTCTGTTACATGCACAGCAGCAAATTGCGTTGCAGGTTAGTGAAGTTACAGGCTTTTCCTCTACTTTGTGGAATTTTAAATGAAAGGCACATGTAATTCTCCTACCTAATAACTTCAAAATACCCAAACATCATTGACATTATCGTTATATATTATATTAGTCTTTATGTTTCAACTGAATAATATGGGGGAAGATTGCTAGTTGATATTGCTAGTTGATATTTCAAGTTGATTCTTTCATTAAACTTTTGATTCAACCAGCATTGCAGTTGAGTTCTTGGGAGTTACCTGACGGACCGAAAGTTCCCAGATTTGTTTAAACTTGTAAATTTATTGTAAAATGCATAGAATACCCTAAAAAATGACAAATGTCTTGTAGTGGTGAATAGTATGCATTTTATTTCTTTCTCTGGCATGAATTGCGAATGTGCTTGATAATGTGAAGCATGAATGATTCATTGAGAACAAGACCTGAAATTTGTACTATACTTGGTTGCTAATAAGTTGTGTATATAATATCAAGACCAACAGAAGTAGCTCCGAAGTTTGTTGTATATAACATGGCAATTTTTATAATTGTGAAATATTATCTTAGTTTTATCAACTATCTTACCGTATTCCTTTTTCAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTTTGTCTTACACAAGTTGTTACCCCGGAAGAGCTTATTAATGACGAAGACTACGAAGATATCATGGAAGACATGCGAGGCGAAGGCGGAAAATTTGGTAAACTTAACTAACACATTTGTTGGTTGTGTTCCTATCAACATAGATTCTATAGAACTTCAAAGCTTCATGCATACTCATTGATTTCATGTTTGTTTTTTCTGTATGATACCTCTGTTTTACAGCCTTTTCTTGTCCTCACATTCTGGTAGAAAGAATCAGACAAATAACTTACAGACAGAAGCCTCCATAGCCTTCTATCTTTATACACCCACCCGACATATGCTTCTTATCTGATTCTGATTTTTTTTTTTTTTGGTTTCAAGTGGTTTTTATTGTGTCTTTGCAGGTGCATTAGTAAACGTTGTAATCCCGCGTCCGAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGCATGAATTTCTGCATCTTTCAACCAAAATTTTCATTTCTTTTTCCTTCCTGCAAACCTGAATTTTGATTTAATACCCAAAAACAATCATCTTATGATATTAGGAACAATGAAATTATAGAAAGTGAAGATGTGATTAACTCAGTAACCTCTTCCATTCACTCATATTTCCTGTTTCATTGGTTTTATCTGGTAACAGAAGAGTTTGTAAACAAGGAAGCATCTTTCTTGGTTGAGTCCTCTTCTAAGTTAATTTGGAAGTCTAACTAATATTTTCTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTNAGAGTACGCAGACATCGAGAGTGCAACGAAAGCTCGATCCGGTTTGAATGGAAGAAAATTTGGAGGGAACCAAGTGATAGCTGTATTCTATCCAGAGAACAAGTTTGCCGAAGGGGAGTATGATGCCTAAACTTCACTTTTTACTTACAAACACAGTTATTGGTAAAAAAAAAAAAAAATAGAAAATATTTACCTTTGTTCTAAATGTGGGAAGGTAAGGTAAGTTTGTGAACAGGCAAGTAAGTAATGGTAGCGATCTAGATTTTAGATAGTTACTGTCTCTGTCATTTTAAATAGTAATGGATGGATAGCCTCATCCCAACCTTCTTCTTCTTTATTACTACTTTACTTTTAATAGACTTTCTTGAATCTTGTGTGTACTATTGTTTTGTTTAATTGTTTCTTCCCTTTTGGTGTATGCAAGCAGAGTTTGAAATAAATTTAAACTTG

mRNA sequence

TACCCATGGTCACATCCTTTGTGCGAAGGCTAGTACTTAGAGACTGATATATAAGGAGAAGGATCTCTCTTCCGAGCCCTAGGATACTCGTTGGCGTGCTTCACCCAATTGCCTCGGGAATTTCAATTTCTCCCCAGAAAGATTTCCATATACCAGACCGAAACTCTGTGGATCATACACCAAATTCAAACATGACGGATTACGATGGGAGGTACGAAGGTAATGGGGAAGATGCAGACAACTATGGCGATGGTTTTTCTCCTCAAGCTCGTGGTGGCCACGACACTCACAGTGATTCGAAATCTCAGCATGGTTCCCGAGAATATGAAAGGGAATCTTCAAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGGGATAGGGAGAAGGACAGGGAGAGGGATCGGGACCGAGGTAGAGAAAGGGATAGGGAGAAAAGCAAGGATGGGGAAAGAGACCGGGAGAAAGACAGGGATAGGGATCGTGACAAGGACCGTGATAGGGATCGTGACCGTCATCATAGAGACCGCCATAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAAGTAGAGATGATGATGATTACTACAGGAGTAGAGACTACGACAGGCGGAGAGACTATGATAAAGAACGAGAAGACAGACATAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACCTGAACATAGGTCAAGATCCCCTTCTCCAACGCGGTCAAGATCACGCTCCAAAAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCCACTACTGCAATATTACCTGGTGCAACTGCTGTTGCAGGTCAGATTCCCGGGACAACTCCAGCAATTCCTGGAATGTTTCCTACCATGTTTCCTCTGGCAACGGGTCAGCCCTTTGGAGCACTTCCTGTAATGCCGGTTCAGGCAATGACTCAACAGGCTACTAGACATGCACGGCGGGTTTATGTGGGAGGGCTACCACCAACAGCCAACGAACAGTCTGTTGCCACATTTTTCAGCCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGCCCTGGAGATGCGGTTGTTAATGTTTATATAAATCATGAGAAAAAGTTTGCTTTTGTTGAGATGAGATCTGTTGAGGAAGCCAGTAATGCCATGGCCTTGGATGGGATCATCTTTGAGGGAGCGCCTGTTAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACGCTTGGTCCCAGCCAGCCAAGCCCCAATCTGAACCTAGCTGCCGTTGGTCTAACACCAGGTTCAGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTCCGAGAGTTGCTGGAGTCTTTTGGGCCCCTTCGAGGTTTTGATCTGGTGAAAGATAGAGAGACGGGAAATTCCAAAGGCTATGCATTTTGTGTTTACCAAGATCTTTCAGTCACTGACATAGCCTGTGCAGCCCTCAACGGTATTAAAATGGGTGATAAGACGCTCACTGTTCGGCGTGCAAATCAAGGAACCAACCAACCCAAACCAGAGCAAGAAAGTGTTCTGTTACATGCACAGCAGCAAATTGCGTTGCAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTTTGTCTTACACAAGTTGTTACCCCGGAAGAGCTTATTAATGACGAAGACTACGAAGATATCATGGAAGACATGCGAGGCGAAGGCGGAAAATTTGGTGCATTAGTAAACGTTGTAATCCCGCGTCCGAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGCATGAATTTCTGCATCTTTCAACCAAAATTTTCATTTCTTTTTCCTTCCTGCAAACCTGAATTTTGATTTAATACCCAAAAACAATCATCTTATGATATTAGGAACAATGAAATTATAGAAAGTGAAGATGTGATTAACTCAGTAACCTCTTCCATTCACTCATATTTCCTGTTTCATTGGTTTTATCTGGTAACAGAAGAGTTTGTAAACAAGGAAGCATCTTTCTTGGTTGAGTCCTCTTCTAAGTTAATTTGGAAGTCTAACTAATATTTTCTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTNAGAGTACGCAGACATCGAGAGTGCAACGAAAGCTCGATCCGGTTTGAATGGAAGAAAATTTGGAGGGAACCAAGTGATAGCTGTATTCTATCCAGAGAACAAGTTTGCCGAAGGGGAGTATGATGCCTAAACTTCACTTTTTACTTACAAACACAGTTATTGGTAAAAAAAAAAAAAAATAGAAAATATTTACCTTTGTTCTAAATGTGGGAAGGTAAGGTAAGTTTGTGAACAGGCAAGTAAGTAATGGTAGCGATCTAGATTTTAGATAGTTACTGTCTCTGTCATTTTAAATAGTAATGGATGGATAGCCTCATCCCAACCTTCTTCTTCTTTATTACTACTTTACTTTTAATAGACTTTCTTGAATCTTGTGTGTACTATTGTTTTGTTTAATTGTTTCTTCCCTTTTGGTGTATGCAAGCAGAGTTTGAAATAAATTTAAACTTG

Coding sequence (CDS)

ATGACGGATTACGATGGGAGGTACGAAGGTAATGGGGAAGATGCAGACAACTATGGCGATGGTTTTTCTCCTCAAGCTCGTGGTGGCCACGACACTCACAGTGATTCGAAATCTCAGCATGGTTCCCGAGAATATGAAAGGGAATCTTCAAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGGGATAGGGAGAAGGACAGGGAGAGGGATCGGGACCGAGGTAGAGAAAGGGATAGGGAGAAAAGCAAGGATGGGGAAAGAGACCGGGAGAAAGACAGGGATAGGGATCGTGACAAGGACCGTGATAGGGATCGTGACCGTCATCATAGAGACCGCCATAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAAGTAGAGATGATGATGATTACTACAGGAGTAGAGACTACGACAGGCGGAGAGACTATGATAAAGAACGAGAAGACAGACATAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACCTGAACATAGGTCAAGATCCCCTTCTCCAACGCGGTCAAGATCACGCTCCAAAAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCCACTACTGCAATATTACCTGGTGCAACTGCTGTTGCAGGTCAGATTCCCGGGACAACTCCAGCAATTCCTGGAATGTTTCCTACCATGTTTCCTCTGGCAACGGGTCAGCCCTTTGGAGCACTTCCTGTAATGCCGGTTCAGGCAATGACTCAACAGGCTACTAGACATGCACGGCGGGTTTATGTGGGAGGGCTACCACCAACAGCCAACGAACAGTCTGTTGCCACATTTTTCAGCCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGCCCTGGAGATGCGGTTGTTAATGTTTATATAAATCATGAGAAAAAGTTTGCTTTTGTTGAGATGAGATCTGTTGAGGAAGCCAGTAATGCCATGGCCTTGGATGGGATCATCTTTGAGGGAGCGCCTGTTAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACGCTTGGTCCCAGCCAGCCAAGCCCCAATCTGAACCTAGCTGCCGTTGGTCTAACACCAGGTTCAGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTCCGAGAGTTGCTGGAGTCTTTTGGGCCCCTTCGAGGTTTTGATCTGGTGAAAGATAGAGAGACGGGAAATTCCAAAGGCTATGCATTTTGTGTTTACCAAGATCTTTCAGTCACTGACATAGCCTGTGCAGCCCTCAACGGTATTAAAATGGGTGATAAGACGCTCACTGTTCGGCGTGCAAATCAAGGAACCAACCAACCCAAACCAGAGCAAGAAAGTGTTCTGTTACATGCACAGCAGCAAATTGCGTTGCAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTTTGTCTTACACAAGTTGTTACCCCGGAAGAGCTTATTAATGACGAAGACTACGAAGATATCATGGAAGACATGCGAGGCGAAGGCGGAAAATTTGGTGCATTAGTAAACGTTGTAATCCCGCGTCCGAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGCATGA

Protein sequence

MTDYDGRYEGNGEDADNYGDGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAILPGATAVAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAAPGVGKA
Homology
[Close]
BLAST of Cp4.1LG12g04920 vs. Swiss-Prot
Match: U2A2B_NICPL (Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia GN=U2AF65B PE=2 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 5.0e-213
Identity = 422/544 (77.57%), Postives = 472/544 (86.76%), Query Frame = 1 

Query: 8   YEGNGEDADNYGDGFSP--QARGGH------DTHSDSKSQHGSREYE--RESSKSREKER 67
           YEGNGED DNY  G SP  ++R  H      D +SDSKSQH SRE E  R+SS+SREK+R
Sbjct: 4   YEGNGEDIDNYTGGSSPPPKSRSSHGHGPTPDDYSDSKSQHSSRENEKDRDSSRSREKDR 63

Query: 68  DKGRDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDRG 127
           ++GRD+++DR+RDRDRGR+RDR             RDRD+D++R++DRDRHH DRHRDR 
Sbjct: 64  ERGRDKDRDRDRDRDRGRDRDR------------GRDRDKDREREKDRDRHHGDRHRDRS 123

Query: 128 ERREGGRSRD--DDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTRS 187
           +RRE  R+RD  DDD +R+RDYD++R++ K+RE RHR RSRSR +   EHRSRS    RS
Sbjct: 124 DRREKERTRDRDDDDRHRTRDYDQQREHAKDRESRHRHRSRSRGRS--EHRSRS----RS 183

Query: 188 RSRSKSKRISGFDMAPPTTAILPGATAVAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 247
           RSRSKSKRISGFDMAPPT+A+LPG TA AGQ+PGT P IPGMFP MFPLA+GQ FGALPV
Sbjct: 184 RSRSKSKRISGFDMAPPTSAMLPGITAAAGQVPGTNPPIPGMFPNMFPLASGQ-FGALPV 243

Query: 248 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 307
           MP+QAMTQQATRHARRVYVGGLP  ANEQSVATFFS VM+AIGGNTAGPGDAVVNVYIN+
Sbjct: 244 MPIQAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINY 303

Query: 308 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAA 367
           EKKFAFVEMRSVEEASNAMALDGIIFEGAP KVRRPSDYNPSLAATLGPSQP+PNLNLAA
Sbjct: 304 EKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAA 363

Query: 368 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 427
           VGL+PGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAF
Sbjct: 364 VGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 423

Query: 428 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLML 487
           CVYQD+SVTDIACAALNGIKMGDKTLTVRRANQGT QPKPEQESVLLHAQQQIALQ+LML
Sbjct: 424 CVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLML 483

Query: 488 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPN-EAAP 539
           QP  ++TKVL LT+V++ +EL +DEDY+DI+EDMR E GKFG+LVNVVIPRP PN E  P
Sbjct: 484 QPATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTP 528

[Close]
BLAST of Cp4.1LG12g04920 vs. Swiss-Prot
Match: U2A2A_NICPL (Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 7.0e-207
Identity = 415/536 (77.43%), Postives = 459/536 (85.63%), Query Frame = 1 

Query: 8   YEGNGEDADNYGDGFSPQARGGHDTHSDSKSQHGSREYE--RESSKSREKERDKGRDREK 67
           YEGNG D DN  +G SP             SQH SR++E  R+SS+SR+KERDKGRD+++
Sbjct: 4   YEGNGVDIDN--NGASPY------------SQHISRDHENERDSSRSRDKERDKGRDKDR 63

Query: 68  DRERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRS 127
           DR+R+RDR R+RDR K        E+D+DR RD+D ++DRDRHHRDRHRDR +RRE  R+
Sbjct: 64  DRDRNRDRDRDRDRVK--------ERDKDRHRDRDGEKDRDRHHRDRHRDRSDRRERERT 123

Query: 128 RD--DDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTRSRSRSKSKR 187
           RD  +DD +RSRDYDRRRD DK+REDR  RR R  S+G  EHRS+S    RSRS SKSKR
Sbjct: 124 RDRDEDDLHRSRDYDRRRDNDKDREDR--RRHRPSSRGRSEHRSKS----RSRSPSKSKR 183

Query: 188 ISGFDMAPPTTAILPGATAVAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQ 247
           ISGFDMAPPTTA+LPGAT  AGQ+PGT PAIPG+F  MFPLA+ Q FGALP+MPVQAMTQ
Sbjct: 184 ISGFDMAPPTTALLPGATDAAGQVPGTNPAIPGLFSNMFPLASSQ-FGALPMMPVQAMTQ 243

Query: 248 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 307
           QATRHARRVYVGGLPPTANEQSVATFFS VM AIGGNTAGPGDAVVNVYINHEKKFAFVE
Sbjct: 244 QATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVE 303

Query: 308 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSA 367
           MRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVG TPGS+
Sbjct: 304 MRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSS 363

Query: 368 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 427
           GGLEGPDRIFVGGLPYYFTE+Q+RELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SV
Sbjct: 364 GGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSV 423

Query: 428 TDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLMLQPGAVSTK 487
           TDIACAALNGIKMGDKTLTVRRANQGT QP PEQESVLLHAQQQIALQ+ MLQPGA++TK
Sbjct: 424 TDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATK 483

Query: 488 VLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEA-APGVGK 539
           VLCLT+VVT +EL +D+DY+DI+EDMR E  KFGALVNVVIPRP PN    PG+GK
Sbjct: 484 VLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGK 510

[Close]
BLAST of Cp4.1LG12g04920 vs. Swiss-Prot
Match: U2A2B_ARATH (Splicing factor U2af large subunit B OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=2)

HSP 1 Score: 657.1 bits (1694), Expect = 1.6e-187
Identity = 388/550 (70.55%), Postives = 440/550 (80.00%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKERDKG 60
           M  Y+G  +G     +N+ + +   +      H DSKS+  S + +++SSK  EK+ + G
Sbjct: 1   MMSYEGNGDGVAISTENHNENYI--SLESSPFHEDSKSRE-SHDLKKDSSKISEKDNENG 60

Query: 61  RDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDRG-ER 120
           RD  KD  +DRDR ++RDREKS+D +R++ +DRDRDR++ +DR RDRHHRDRHRDR  ER
Sbjct: 61  RD--KDGNKDRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRER 120

Query: 121 REGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSP--------S 180
            E     DDD + RSRD DRRR  D++RE RHRRRSRSRS+   E RSRS         S
Sbjct: 121 SEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRS 180

Query: 181 PTRSRSRSKSKRISGFDMAPPTTAILPGATAVAGQIPG--TTPAIPGMFPTMFPLATGQP 240
            +RSRSRSKSKR SGFDMAPP   +   A A AGQ+P   TT  IPGMF  MFP+  GQ 
Sbjct: 181 RSRSRSRSKSKRRSGFDMAPPDM-LAATAVAAAGQVPSVPTTATIPGMFSNMFPMVPGQQ 240

Query: 241 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 300
            GALPV+PVQAMTQQATRHARRVYVGGLPPTANEQSV+TFFSQVM+AIGGNTAGPGDAVV
Sbjct: 241 LGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVV 300

Query: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP 360
           NVYINHEKKFAFVEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAATLGPSQP+P
Sbjct: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNP 360

Query: 361 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 420
           NLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE Q+RELLESFGPLRGF+LVKDRETGN
Sbjct: 361 NLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGN 420

Query: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIA 480
           SKGYAFCVYQD SVTDIACAALNGIKMGDKTLTVRRA QG  QPKPEQE VLL+AQQQIA
Sbjct: 421 SKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIA 480

Query: 481 LQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRP 539
           LQ+LM QPG   TK++CLTQVVT ++L +DE+Y +IMEDMR EGGKFG LVNVVIPRP P
Sbjct: 481 LQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNP 540

[Close]
BLAST of Cp4.1LG12g04920 vs. Swiss-Prot
Match: U2A2A_ARATH (Splicing factor U2af large subunit A OS=Arabidopsis thaliana GN=U2AF65A PE=1 SV=2)

HSP 1 Score: 655.6 bits (1690), Expect = 4.7e-187
Identity = 387/536 (72.20%), Postives = 437/536 (81.53%), Query Frame = 1 

Query: 8   YEGNGEDADNYGDGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDR 67
           +EGNG  AD   D  +    G  +   DSK +  SR++ERE+S+S+++ER+KGRD  KDR
Sbjct: 7   HEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRD--KDR 66

Query: 68  ERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRSRD 127
           ERD +  R   R + +DGE+ +E+ RD+DRD      R   HRD  R+RGERRE G  RD
Sbjct: 67  ERDSEVSR---RSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERG-GRD 126

Query: 128 DDDYYRSRD--YDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTRSRSRSKSKRIS 187
           DDDY RSRD  +DRRRD   +R  R  RRSRSRSK   E R+RS SP++S+     +R+S
Sbjct: 127 DDDYRRSRDRDHDRRRD---DRGGRRSRRSRSRSKDRSERRTRSRSPSKSK-----QRVS 186

Query: 188 GFDMAPPTTAILPGATAVAGQIPGTTPAIPG--MFPTMFPLATGQPFGALPVMPVQAMTQ 247
           GFDMAPP +A+L    AV GQ+P   P +PG  MFP MFPL TGQ FG L +MP+QAMTQ
Sbjct: 187 GFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQ 246

Query: 248 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 307
           QATRHARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVE
Sbjct: 247 QATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVE 306

Query: 308 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSA 367
           MRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP+LNLAAVGLTPG++
Sbjct: 307 MRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 366

Query: 368 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 427
           GGLEGPDRIFVGGLPYYFTE+QVRELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSV
Sbjct: 367 GGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSV 426

Query: 428 TDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLMLQPGAVSTK 487
           TDIACAALNGIKMGDKTLTVRRANQGT   KPEQE+VLLHAQQQIA Q++MLQPGAV+T 
Sbjct: 427 TDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATT 486

Query: 488 VLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPN-EAAPGVGK 539
           V+CLTQVVT +EL +DE+Y DIMEDMR EGGKFGAL NVVIPRP PN E   G+GK
Sbjct: 487 VVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGK 528

[Close]
BLAST of Cp4.1LG12g04920 vs. Swiss-Prot
Match: U2A2B_ORYSJ (Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=3 SV=2)

HSP 1 Score: 629.8 bits (1623), Expect = 2.8e-179
Identity = 374/524 (71.37%), Postives = 424/524 (80.92%), Query Frame = 1 

Query: 20  DGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDR 79
           DG  P+     DTHS        RE      + +++ER+K +DRE+ R+RDRDRGR+RDR
Sbjct: 13  DGGRPEG----DTHS--------REDGLSKPRDKDREREKDKDRERHRDRDRDRGRDRDR 72

Query: 80  EKSKDGERDREKDRDRDRDKDRDRDRDRHHRDR--HRDRGERREGGRSRDDDDYYRSRDY 139
           +K K+ +RD+E+DRDRDRDKDRDR   RHHR+R  HRDR          DD D +RSRD 
Sbjct: 73  DKDKEKDRDKERDRDRDRDKDRDR-HHRHHRERREHRDRS---------DDHDRHRSRDS 132

Query: 140 DRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAIL 199
           +RRRD++++   RHR RSRSRS+G    R R    +RSRSRSKSKR+SGFDMAPP  A++
Sbjct: 133 ERRRDHERDGRRRHRSRSRSRSRG----RDRR---SRSRSRSKSKRVSGFDMAPPAQAVV 192

Query: 200 PGATAV--AGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVG 259
           P   A+    Q PGT  AIPGMFP M P+  GQ F  L + P QAMTQQATRHARRVYVG
Sbjct: 193 PQFPAIPTPSQFPGT--AIPGMFPNMLPMGVGQ-FNPLVIQP-QAMTQQATRHARRVYVG 252

Query: 260 GLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA 319
           GLPPTANEQSVA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMA
Sbjct: 253 GLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMA 312

Query: 320 LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVG 379
           LDGI+FEGAPVKVRRP+DYNPSLAA LGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVG
Sbjct: 313 LDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVG 372

Query: 380 GLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIK 439
           GLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIK
Sbjct: 373 GLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIK 432

Query: 440 MGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEE 499
           MGDKTLTVRRANQG  QP+PEQES+LL AQQQ+ LQKL+ Q GA+ TKV+CLTQVV+ +E
Sbjct: 433 MGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADE 492

Query: 500 LINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNE-AAPGVGK 539
           L +DE+YEDIMEDMR E GK+G L+ VVIPRP P+     GVGK
Sbjct: 493 LKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGK 503

[Close]
BLAST of Cp4.1LG12g04920 vs. TrEMBL
Match: A0A0A0K920_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022350 PE=4 SV=1)

HSP 1 Score: 950.3 bits (2455), Expect = 1.0e-273
Identity = 523/545 (95.96%), Postives = 527/545 (96.70%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQAR----GGHDTHSDSKSQHGSREYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQAR    GGHDTH+DSKSQHGSR+YERESSKSREKE
Sbjct: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRD--KDRDRDRDRHHRDRHR 120
           RDKGRDRE  RERDRDRGR+RDREKSKDGERDREKDRDRDRD  KDRDRDRDRHHRDRHR
Sbjct: 61  RDKGRDRE--RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHR 120

Query: 121 DRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTR 180
           DRGERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGI EHRSRSPSPTR
Sbjct: 121 DRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTR 180

Query: 181 SRSRSKSKRISGFDMAPPTTAILPGATAV-AGQIPGTTPAIPGMFPTMFPLATGQPFGAL 240
           SRSRSKSKRISGFDMAPPTTAIL GATA  AGQIPGTTPAIPGMFPTMFPLATGQPFGAL
Sbjct: 181 SRSRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGTTPAIPGMFPTMFPLATGQPFGAL 240

Query: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300
           PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI
Sbjct: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300

Query: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNL 360
           NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNL
Sbjct: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 360

Query: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420
           AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY
Sbjct: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420

Query: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKL 480
           AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIALQ L
Sbjct: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ-L 480

Query: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAA 539
           MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG LVNVVIPRPRPNEAA
Sbjct: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAA 540

[Close]
BLAST of Cp4.1LG12g04920 vs. TrEMBL
Match: M5W6T7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003118mg PE=4 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 2.8e-231
Identity = 463/559 (82.83%), Postives = 501/559 (89.62%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDG-FSPQAR----GGHDTHSDSKSQHGSREYERESSKSREK 60
           MTDY+GRYEGNGEDADNYGDG  SPQ R    GG D +SDSKSQHGSR+YERESSKSREK
Sbjct: 1   MTDYEGRYEGNGEDADNYGDGGSSPQPRATNHGGPDDYSDSKSQHGSRDYERESSKSREK 60

Query: 61  ERDKGRDREKDRERDRDRGRERDRE----KSKDGERDREKDRDRDRDKDR------DRDR 120
           ER+KGRD+EKDR+RDR+R R+RDR+    K KD ERDR++DR+RDRD+DR      DRDR
Sbjct: 61  EREKGRDKEKDRDRDRERERDRDRDRGRSKDKDRERDRDRDRNRDRDRDRERERSRDRDR 120

Query: 121 DRHHRDRHRDRGERREGGRSRDDDD--YYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIP 180
           DRHHRDRHRDR ER E  R +DDDD  +YR RD DRRRDY+++REDRHRR+SRSRS+G  
Sbjct: 121 DRHHRDRHRDR-ERSERRRDKDDDDDDHYRVRDSDRRRDYERDREDRHRRKSRSRSRGRS 180

Query: 181 EHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAILPGAT-AVAGQIPGTTPAIPGMFPTMF 240
           EH+SRS S  RSRSRSKSKRISGFDMAPP +A+L GA  A AGQIPGT+P IPGMFP MF
Sbjct: 181 EHKSRSRS--RSRSRSKSKRISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMF 240

Query: 241 PLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA 300
           PLATGQ FG+LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA
Sbjct: 241 PLATGQQFGSLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA 300

Query: 301 GPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 360
            PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL
Sbjct: 301 APGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 360

Query: 361 GPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLV 420
           GPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ++ELLESFGPLRGFDLV
Sbjct: 361 GPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIKELLESFGPLRGFDLV 420

Query: 421 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLL 480
           KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLL
Sbjct: 421 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 480

Query: 481 HAQQQIALQKLML--QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALV 539
           HAQQQIALQ+ ML   P +V+TKV+CLTQVVT +EL +D++YEDI+EDMR EGGKFG LV
Sbjct: 481 HAQQQIALQRFMLLQPPSSVATKVVCLTQVVTADELRDDDEYEDILEDMRLEGGKFGPLV 540

[Close]
BLAST of Cp4.1LG12g04920 vs. TrEMBL
Match: W9QYU1_9ROSA (Splicing factor U2af large subunit B OS=Morus notabilis GN=L484_014621 PE=4 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 1.7e-228
Identity = 455/562 (80.96%), Postives = 494/562 (87.90%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQARGGH----DTHSDSKSQHGSREYERESSKSREKE 60
           M DYDGRYEGNGED DNYG   SPQ RGG     D +SDSKSQHG R++ERESSKSREKE
Sbjct: 1   MADYDGRYEGNGEDVDNYGGVSSPQPRGGSHGGTDDYSDSKSQHGFRDHERESSKSREKE 60

Query: 61  RDKGR--------------DREKDRERDRDRGRERDREKSKDGERDREKDRDRDRDKDRD 120
           R+KGR              DR++DRERD+DRGR +DR++ +D +RDR+++RDRDRD++R+
Sbjct: 61  REKGREKERDRDRDRDRDRDRDRDRERDKDRGRSKDRDRERDRDRDRDRERDRDRDRERE 120

Query: 121 RDRDRHHRDRHRDRGERREGGRSRDDDD-YYRSRDYDRRRDYDKEREDRHRRRSRSRSKG 180
           RDRDRHHRDRHRDR +RRE GR RDDDD YYRSRDYDRRRDYDK+REDRH+R+SRS S+G
Sbjct: 121 RDRDRHHRDRHRDRSDRRERGRDRDDDDDYYRSRDYDRRRDYDKDREDRHKRKSRSCSRG 180

Query: 181 IPEHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAILPGATAVA--GQIPGTTPAIPGMFP 240
             EHRSRS      RSRSKSKRISGFDMAPP +A+L GA A A  GQIPGTT  +PGMFP
Sbjct: 181 RSEHRSRS------RSRSKSKRISGFDMAPPASAMLAGAAAAAAAGQIPGTT-TMPGMFP 240

Query: 241 TMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 300
            MFPLATGQ FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG
Sbjct: 241 NMFPLATGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 300

Query: 301 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 360
           NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA
Sbjct: 301 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 360

Query: 361 ATLGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 420
           ATLGPS P+PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ++ELLESFGPLRGF
Sbjct: 361 ATLGPSLPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIKELLESFGPLRGF 420

Query: 421 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQES 480
           DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQES
Sbjct: 421 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 480

Query: 481 VLLHAQQQIALQKLML--QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG 539
           VLLHAQQQIALQ+ ML  QPGA ++KV+CLTQVV+ +EL +DE+YEDIMEDM+ EG KFG
Sbjct: 481 VLLHAQQQIALQRFMLLQQPGAATSKVVCLTQVVSADELRDDEEYEDIMEDMKQEGEKFG 540

[Close]
BLAST of Cp4.1LG12g04920 vs. TrEMBL
Match: V4UHX9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025221mg PE=4 SV=1)

HSP 1 Score: 787.3 bits (2032), Expect = 1.2e-224
Identity = 448/550 (81.45%), Postives = 485/550 (88.18%), Query Frame = 1 

Query: 8   YEGNGEDADN-------YGDGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKERDKG 67
           YE NGED DN       Y  G SPQ R   D HSDSK QHGSR+YER SS+SREKE++KG
Sbjct: 4   YEVNGEDVDNNNNNNNNYEYGSSPQPRSADD-HSDSKPQHGSRDYERGSSRSREKEKEKG 63

Query: 68  RDREKDRERDRDRGRE--RDREKSKDGER------DREKDRDRDRDKDRDRDRDRHHRDR 127
           RD+++DR+RDRDR RE  RDREKS+D +R      DREK RDRDRD+++DR++DRHHRDR
Sbjct: 64  RDKDRDRDRDRDRTREKDRDREKSRDTDREKSRDMDREKSRDRDRDREKDREKDRHHRDR 123

Query: 128 HRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPS 187
           HR+R  ER E  R RDDDD+YRSRDYDRR+DYD++REDRH+RRSRSRS G  EHRSRS  
Sbjct: 124 HRERSRERSERRRDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSRSRSIGRSEHRSRS-- 183

Query: 188 PTRSRSRSKSKRISGFDMAPPTTAILPGAT--AVAGQIPGTTPAIPGMFPTMFPLATGQP 247
             RSRSRSKSKRISGFDMAPP +A+L      A AGQIPG  PAIPGMFP MFPL TGQ 
Sbjct: 184 --RSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQ 243

Query: 248 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 307
           FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV
Sbjct: 244 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 303

Query: 308 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP 367
           NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P
Sbjct: 304 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 363

Query: 368 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 427
           NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGN
Sbjct: 364 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 423

Query: 428 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIA 487
           SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIA
Sbjct: 424 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 483

Query: 488 LQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRP 539
           LQ+LMLQPG+V +KV+CLTQVV+ +EL +DE+YE+I+EDMR EGGKFG LVNV+IPRP P
Sbjct: 484 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNP 543

[Close]
BLAST of Cp4.1LG12g04920 vs. TrEMBL
Match: U5GHU8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12700g PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 3.4e-224
Identity = 449/550 (81.64%), Postives = 486/550 (88.36%), Query Frame = 1 

Query: 1   MTDYDG-RYEGNGE---DADNYGDGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKE 60
           MTDY+  RYEGNG    + ++YG   SP  RGG D HSDSKSQHGSR+YERESSK REKE
Sbjct: 1   MTDYEAERYEGNGGAVFENNSYGADSSPPPRGGDD-HSDSKSQHGSRDYERESSKGREKE 60

Query: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDR 120
           R +  DR++DR+RDR R R++DREKS+  +R+R++D+D DR +DRD+D D HHRDRHRDR
Sbjct: 61  RSRDSDRDRDRDRDRKRDRDKDREKSRGRDRERDRDKDSDRHRDRDKDSD-HHRDRHRDR 120

Query: 121 GERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTRSR 180
            ERR+ GR RDDDDYYRSRDYDRRRDYD++ EDRHRR SRSRSKG  EHRSRS    RSR
Sbjct: 121 SERRDRGRDRDDDDYYRSRDYDRRRDYDRDSEDRHRRLSRSRSKGRSEHRSRS----RSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILPGATAVA---GQIPGTTPAIPGMFPTMFPLATGQPFGAL 240
           SRSKSKR+SGFDMAPP++AILP A A A   GQI GTTP IPGMFP MFPL T Q FGAL
Sbjct: 181 SRSKSKRMSGFDMAPPSSAILPNAAAAAAASGQIAGTTPPIPGMFPNMFPLGTSQ-FGAL 240

Query: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300
           PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI
Sbjct: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300

Query: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNL 360
           NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNL
Sbjct: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 360

Query: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420
           +AVGL PGSAGGLEGPDRIFVGGLPYYFTE+Q+RELLESFGPLRGFDLVKDRETGNSKGY
Sbjct: 361 SAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGNSKGY 420

Query: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKL 480
           AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQE+VLLHAQQQIALQ+L
Sbjct: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQENVLLHAQQQIALQRL 480

Query: 481 MLQP----GAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRP 539
           MLQP      V TKV+CLTQVVT +EL +D++YEDI+EDMR E GKFG LVNVVIPRPRP
Sbjct: 481 MLQPQPQQQPVPTKVVCLTQVVTGDELKDDDEYEDILEDMRTEAGKFGQLVNVVIPRPRP 540

[Close]
BLAST of Cp4.1LG12g04920 vs. TAIR10
Match: AT1G60900.1 (AT1G60900.1 U2 snRNP auxilliary factor, large subunit, splicing factor)

HSP 1 Score: 657.1 bits (1694), Expect = 9.1e-189
Identity = 388/550 (70.55%), Postives = 440/550 (80.00%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKERDKG 60
           M  Y+G  +G     +N+ + +   +      H DSKS+  S + +++SSK  EK+ + G
Sbjct: 1   MMSYEGNGDGVAISTENHNENYI--SLESSPFHEDSKSRE-SHDLKKDSSKISEKDNENG 60

Query: 61  RDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDRG-ER 120
           RD  KD  +DRDR ++RDREKS+D +R++ +DRDRDR++ +DR RDRHHRDRHRDR  ER
Sbjct: 61  RD--KDGNKDRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRER 120

Query: 121 REGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSP--------S 180
            E     DDD + RSRD DRRR  D++RE RHRRRSRSRS+   E RSRS         S
Sbjct: 121 SEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRS 180

Query: 181 PTRSRSRSKSKRISGFDMAPPTTAILPGATAVAGQIPG--TTPAIPGMFPTMFPLATGQP 240
            +RSRSRSKSKR SGFDMAPP   +   A A AGQ+P   TT  IPGMF  MFP+  GQ 
Sbjct: 181 RSRSRSRSKSKRRSGFDMAPPDM-LAATAVAAAGQVPSVPTTATIPGMFSNMFPMVPGQQ 240

Query: 241 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 300
            GALPV+PVQAMTQQATRHARRVYVGGLPPTANEQSV+TFFSQVM+AIGGNTAGPGDAVV
Sbjct: 241 LGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVV 300

Query: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP 360
           NVYINHEKKFAFVEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAATLGPSQP+P
Sbjct: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNP 360

Query: 361 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 420
           NLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE Q+RELLESFGPLRGF+LVKDRETGN
Sbjct: 361 NLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGN 420

Query: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIA 480
           SKGYAFCVYQD SVTDIACAALNGIKMGDKTLTVRRA QG  QPKPEQE VLL+AQQQIA
Sbjct: 421 SKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIA 480

Query: 481 LQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRP 539
           LQ+LM QPG   TK++CLTQVVT ++L +DE+Y +IMEDMR EGGKFG LVNVVIPRP P
Sbjct: 481 LQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNP 540

[Close]
BLAST of Cp4.1LG12g04920 vs. TAIR10
Match: AT4G36690.1 (AT4G36690.1 U2 snRNP auxilliary factor, large subunit, splicing factor)

HSP 1 Score: 655.6 bits (1690), Expect = 2.7e-188
Identity = 387/536 (72.20%), Postives = 437/536 (81.53%), Query Frame = 1 

Query: 8   YEGNGEDADNYGDGFSPQARGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDR 67
           +EGNG  AD   D  +    G  +   DSK +  SR++ERE+S+S+++ER+KGRD  KDR
Sbjct: 7   HEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRD--KDR 66

Query: 68  ERDRDRGRERDREKSKDGERDREKDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRSRD 127
           ERD +  R   R + +DGE+ +E+ RD+DRD      R   HRD  R+RGERRE G  RD
Sbjct: 67  ERDSEVSR---RSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERG-GRD 126

Query: 128 DDDYYRSRD--YDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTRSRSRSKSKRIS 187
           DDDY RSRD  +DRRRD   +R  R  RRSRSRSK   E R+RS SP++S+     +R+S
Sbjct: 127 DDDYRRSRDRDHDRRRD---DRGGRRSRRSRSRSKDRSERRTRSRSPSKSK-----QRVS 186

Query: 188 GFDMAPPTTAILPGATAVAGQIPGTTPAIPG--MFPTMFPLATGQPFGALPVMPVQAMTQ 247
           GFDMAPP +A+L    AV GQ+P   P +PG  MFP MFPL TGQ FG L +MP+QAMTQ
Sbjct: 187 GFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQ 246

Query: 248 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 307
           QATRHARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVE
Sbjct: 247 QATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVE 306

Query: 308 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSA 367
           MRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP+LNLAAVGLTPG++
Sbjct: 307 MRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 366

Query: 368 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 427
           GGLEGPDRIFVGGLPYYFTE+QVRELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSV
Sbjct: 367 GGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSV 426

Query: 428 TDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLMLQPGAVSTK 487
           TDIACAALNGIKMGDKTLTVRRANQGT   KPEQE+VLLHAQQQIA Q++MLQPGAV+T 
Sbjct: 427 TDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATT 486

Query: 488 VLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPN-EAAPGVGK 539
           V+CLTQVVT +EL +DE+Y DIMEDMR EGGKFGAL NVVIPRP PN E   G+GK
Sbjct: 487 VVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGK 528

[Close]
BLAST of Cp4.1LG12g04920 vs. TAIR10
Match: AT1G60830.1 (AT1G60830.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 90.1 bits (222), Expect = 4.4e-18
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 1 

Query: 474 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRP-NEA 533
           MLQPG   TK++CLTQVVT ++L +D +Y DIMEDM  EGGKFG LVNVVIPRP P ++ 
Sbjct: 1   MLQPGGTPTKIVCLTQVVTADDLRDDAEYADIMEDMSQEGGKFGNLVNVVIPRPNPDHDP 60

Query: 534 APGVGK 539
            PGVGK
Sbjct: 61  TPGVGK 66

[Close]
BLAST of Cp4.1LG12g04920 vs. TAIR10
Match: AT5G09880.1 (AT5G09880.1 Splicing factor, CC1-like)

HSP 1 Score: 70.1 bits (170), Expect = 4.8e-12
Identity = 67/251 (26.69%), Postives = 110/251 (43.82%), Query Frame = 1 

Query: 247 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 306
           R  R V+   +P  A E+ V  FFS+               +++      K   ++E   
Sbjct: 165 RDQRTVFAYQMPLKATERDVYEFFSKA------GKVRDVRLIMDRNSRRSKGVGYIEFYD 224

Query: 307 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSAGGL 366
           V     A+AL G +F G PV V+ PS+   +LA +          N   VG T       
Sbjct: 225 VMSVPMAIALSGQLFLGQPVMVK-PSEAEKNLAQS----------NSTTVGGT------- 284

Query: 367 EGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 426
            GP   +++VG L +  +E Q+R++ E+FGP+    L  D ETG  KG+ F  +  L  +
Sbjct: 285 -GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHS 344

Query: 427 DIACAALNG-IKMGDKTLTVRRANQ--GTNQPKPEQE--------SVLLHAQQQIALQKL 485
             A  ALNG +++  +T+ V   +   GT    P+           + L+AQ +  L + 
Sbjct: 345 KAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQK 390

[Close]
BLAST of Cp4.1LG12g04920 vs. TAIR10
Match: AT5G50250.1 (AT5G50250.1 chloroplast RNA-binding protein 31B)

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-10
Identity = 56/204 (27.45%), Postives = 89/204 (43.63%), Query Frame = 1 

Query: 251 RVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 310
           +++VG LP   + Q++A  F Q        T    + + N   +  + F FV M +VEEA
Sbjct: 114 KLFVGNLPYDVDSQALAMLFEQA------GTVEISEVIYNRDTDQSRGFGFVTMSTVEEA 173

Query: 311 SNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPS--PNLNLAAVGLTPGSAGGLEG 370
             A+      F    V  RR      + AA  G S+P   P +  AA             
Sbjct: 174 EKAVEK----FNSFEVNGRR---LTVNRAAPRG-SRPERQPRVYDAAF------------ 233

Query: 371 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 430
             RI+VG LP+     ++  L    G +    +V DRETG S+G+ F    + +  ++A 
Sbjct: 234 --RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAI 289

Query: 431 AALNGIKMGDKTLTVRRANQGTNQ 453
           AAL+G  +  + + V  A + T +
Sbjct: 294 AALDGQNLEGRAIKVNVAEERTRR 289

[Close]
BLAST of Cp4.1LG12g04920 vs. NCBI nr
Match: gi|449441167|ref|XP_004138355.1| (PREDICTED: splicing factor U2af large subunit A isoform X9 [Cucumis sativus])

HSP 1 Score: 961.4 bits (2484), Expect = 6.4e-277
Identity = 524/544 (96.32%), Postives = 528/544 (97.06%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQAR----GGHDTHSDSKSQHGSREYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQAR    GGHDTH+DSKSQHGSR+YERESSKSREKE
Sbjct: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREK--DRDRDRDKDRDRDRDRHHRDRHR 120
           RDKGRDRE  RERDRDRGR+RDREKSKDGERDREK  DRDRDRDKDRDRDRDRHHRDRHR
Sbjct: 61  RDKGRDRE--RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHR 120

Query: 121 DRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTR 180
           DRGERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGI EHRSRSPSPTR
Sbjct: 121 DRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTR 180

Query: 181 SRSRSKSKRISGFDMAPPTTAILPGATAVAGQIPGTTPAIPGMFPTMFPLATGQPFGALP 240
           SRSRSKSKRISGFDMAPPTTAIL GATA AGQIPGTTPAIPGMFPTMFPLATGQPFGALP
Sbjct: 181 SRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALP 240

Query: 241 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 300
           VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN
Sbjct: 241 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 300

Query: 301 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLA 360
           HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNLA
Sbjct: 301 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 360

Query: 361 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA 420
           AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA
Sbjct: 361 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA 420

Query: 421 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLM 480
           FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIALQKLM
Sbjct: 421 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLM 480

Query: 481 LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAAP 539
           LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG LVNVVIPRPRPNEAAP
Sbjct: 481 LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAP 540

[Close]
BLAST of Cp4.1LG12g04920 vs. NCBI nr
Match: gi|659089615|ref|XP_008445608.1| (PREDICTED: splicing factor U2af large subunit A-like isoform X7 [Cucumis melo])

HSP 1 Score: 959.5 bits (2479), Expect = 2.4e-276
Identity = 524/544 (96.32%), Postives = 528/544 (97.06%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQAR----GGHDTHSDSKSQHGSREYERESSKSREKE 60
           MTDYDGRYEGNGEDADNYGDGFSPQAR    GGHDTH+DSKSQHGSR+YERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREK--DRDRDRDKDRDRDRDRHHRDRHR 120
           RDKGRDR  DRERDRDRGR+RDREKSKDGERDREK  DRDRDRDKDRDRDRDRHHRDRHR
Sbjct: 61  RDKGRDR--DRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHR 120

Query: 121 DRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTR 180
           DRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGI EH SRSPSPTR
Sbjct: 121 DRGERREGGRSRDDDDYYRSRDCDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTR 180

Query: 181 SRSRSKSKRISGFDMAPPTTAILPGATAVAGQIPGTTPAIPGMFPTMFPLATGQPFGALP 240
           SRSRSKSKRISGFDMAPPTTAIL GATA AGQIPG TPAIPGMFPTMFPLATGQPFGALP
Sbjct: 181 SRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGATPAIPGMFPTMFPLATGQPFGALP 240

Query: 241 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 300
           VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN
Sbjct: 241 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 300

Query: 301 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLA 360
           HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNLA
Sbjct: 301 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 360

Query: 361 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA 420
           AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA
Sbjct: 361 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA 420

Query: 421 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLM 480
           FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIALQKLM
Sbjct: 421 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLM 480

Query: 481 LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAAP 539
           LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG LVNVVIPRPRPNEAAP
Sbjct: 481 LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAP 540

[Close]
BLAST of Cp4.1LG12g04920 vs. NCBI nr
Match: gi|778709974|ref|XP_011656493.1| (PREDICTED: splicing factor U2af large subunit A isoform X8 [Cucumis sativus])

HSP 1 Score: 956.8 bits (2472), Expect = 1.6e-275
Identity = 524/545 (96.15%), Postives = 528/545 (96.88%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQAR----GGHDTHSDSKSQHGSREYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQAR    GGHDTH+DSKSQHGSR+YERESSKSREKE
Sbjct: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRD--KDRDRDRDRHHRDRHR 120
           RDKGRDRE  RERDRDRGR+RDREKSKDGERDREKDRDRDRD  KDRDRDRDRHHRDRHR
Sbjct: 61  RDKGRDRE--RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHR 120

Query: 121 DRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTR 180
           DRGERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGI EHRSRSPSPTR
Sbjct: 121 DRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTR 180

Query: 181 SRSRSKSKRISGFDMAPPTTAILPGATAV-AGQIPGTTPAIPGMFPTMFPLATGQPFGAL 240
           SRSRSKSKRISGFDMAPPTTAIL GATA  AGQIPGTTPAIPGMFPTMFPLATGQPFGAL
Sbjct: 181 SRSRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGTTPAIPGMFPTMFPLATGQPFGAL 240

Query: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300
           PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI
Sbjct: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300

Query: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNL 360
           NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNL
Sbjct: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 360

Query: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420
           AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY
Sbjct: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420

Query: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKL 480
           AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIALQKL
Sbjct: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKL 480

Query: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAA 539
           MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG LVNVVIPRPRPNEAA
Sbjct: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAA 540

[Close]
BLAST of Cp4.1LG12g04920 vs. NCBI nr
Match: gi|659089613|ref|XP_008445607.1| (PREDICTED: splicing factor U2af large subunit A-like isoform X6 [Cucumis melo])

HSP 1 Score: 954.9 bits (2467), Expect = 6.0e-275
Identity = 524/545 (96.15%), Postives = 528/545 (96.88%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQAR----GGHDTHSDSKSQHGSREYERESSKSREKE 60
           MTDYDGRYEGNGEDADNYGDGFSPQAR    GGHDTH+DSKSQHGSR+YERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRD--KDRDRDRDRHHRDRHR 120
           RDKGRDR  DRERDRDRGR+RDREKSKDGERDREKDRDRDRD  KDRDRDRDRHHRDRHR
Sbjct: 61  RDKGRDR--DRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHR 120

Query: 121 DRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTR 180
           DRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGI EH SRSPSPTR
Sbjct: 121 DRGERREGGRSRDDDDYYRSRDCDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTR 180

Query: 181 SRSRSKSKRISGFDMAPPTTAILPGATAV-AGQIPGTTPAIPGMFPTMFPLATGQPFGAL 240
           SRSRSKSKRISGFDMAPPTTAIL GATA  AGQIPG TPAIPGMFPTMFPLATGQPFGAL
Sbjct: 181 SRSRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGATPAIPGMFPTMFPLATGQPFGAL 240

Query: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300
           PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI
Sbjct: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300

Query: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNL 360
           NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNL
Sbjct: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 360

Query: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420
           AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY
Sbjct: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420

Query: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKL 480
           AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIALQKL
Sbjct: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKL 480

Query: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAA 539
           MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG LVNVVIPRPRPNEAA
Sbjct: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAA 540

[Close]
BLAST of Cp4.1LG12g04920 vs. NCBI nr
Match: gi|700190719|gb|KGN45923.1| (hypothetical protein Csa_6G022350 [Cucumis sativus])

HSP 1 Score: 950.3 bits (2455), Expect = 1.5e-273
Identity = 523/545 (95.96%), Postives = 527/545 (96.70%), Query Frame = 1 

Query: 1   MTDYDGRYEGNGEDADNYGDGFSPQAR----GGHDTHSDSKSQHGSREYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQAR    GGHDTH+DSKSQHGSR+YERESSKSREKE
Sbjct: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRDRDRD--KDRDRDRDRHHRDRHR 120
           RDKGRDRE  RERDRDRGR+RDREKSKDGERDREKDRDRDRD  KDRDRDRDRHHRDRHR
Sbjct: 61  RDKGRDRE--RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHR 120

Query: 121 DRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPTR 180
           DRGERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGI EHRSRSPSPTR
Sbjct: 121 DRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTR 180

Query: 181 SRSRSKSKRISGFDMAPPTTAILPGATAV-AGQIPGTTPAIPGMFPTMFPLATGQPFGAL 240
           SRSRSKSKRISGFDMAPPTTAIL GATA  AGQIPGTTPAIPGMFPTMFPLATGQPFGAL
Sbjct: 181 SRSRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGTTPAIPGMFPTMFPLATGQPFGAL 240

Query: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300
           PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI
Sbjct: 241 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 300

Query: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNL 360
           NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNL
Sbjct: 301 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 360

Query: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420
           AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY
Sbjct: 361 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 420

Query: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKL 480
           AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIALQ L
Sbjct: 421 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ-L 480

Query: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAA 539
           MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG LVNVVIPRPRPNEAA
Sbjct: 481 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAA 540

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g04920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
U2A2B_NICPL5.0e-21377.57Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia GN=U2AF65B PE=... [more]
U2A2A_NICPL7.0e-20777.43Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia GN=U2AF65A PE=... [more]
U2A2B_ARATH1.6e-18770.55Splicing factor U2af large subunit B OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=... [more]
U2A2A_ARATH4.7e-18772.20Splicing factor U2af large subunit A OS=Arabidopsis thaliana GN=U2AF65A PE=1 SV=... [more]
U2A2B_ORYSJ2.8e-17971.37Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B ... [more]
BLAST of Cp4.1LG12g04920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K920_CUCSA1.0e-27395.96Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022350 PE=4 SV=1[more]
M5W6T7_PRUPE2.8e-23182.83Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003118mg PE=4 SV=1[more]
W9QYU1_9ROSA1.7e-22880.96Splicing factor U2af large subunit B OS=Morus notabilis GN=L484_014621 PE=4 SV=1[more]
V4UHX9_9ROSI1.2e-22481.45Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025221mg PE=4 SV=1[more]
U5GHU8_POPTR3.4e-22481.64Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12700g PE=4 SV=1[more]
BLAST of Cp4.1LG12g04920 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G60900.19.1e-18970.55 U2 snRNP auxilliary factor, large subunit, splicing factor[more]
AT4G36690.12.7e-18872.20 U2 snRNP auxilliary factor, large subunit, splicing factor[more]
AT1G60830.14.4e-1866.67 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G09880.14.8e-1226.69 Splicing factor, CC1-like[more]
AT5G50250.12.6e-1027.45 chloroplast RNA-binding protein 31B[more]
BLAST of Cp4.1LG12g04920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441167|ref|XP_004138355.1|6.4e-27796.32PREDICTED: splicing factor U2af large subunit A isoform X9 [Cucumis sativus][more]
gi|659089615|ref|XP_008445608.1|2.4e-27696.32PREDICTED: splicing factor U2af large subunit A-like isoform X7 [Cucumis melo][more]
gi|778709974|ref|XP_011656493.1|1.6e-27596.15PREDICTED: splicing factor U2af large subunit A isoform X8 [Cucumis sativus][more]
gi|659089613|ref|XP_008445607.1|6.0e-27596.15PREDICTED: splicing factor U2af large subunit A-like isoform X6 [Cucumis melo][more]
gi|700190719|gb|KGN45923.1|1.5e-27395.96hypothetical protein Csa_6G022350 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR006529U2AF_lg
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
cellular_component GO:0005634 nucleus
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g04920.1Cp4.1LG12g04920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 372..441
score: 4.0
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 251..329
score: 6.0E-13coord: 371..444
score: 9.2
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 250..333
score: 12.697coord: 370..448
score: 15
IPR006529U2 snRNP auxilliary factor, large subunit, splicing factorTIGRFAMsTIGR01642TIGR01642coord: 71..538
score: 8.8E
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 246..330
score: 2.2E-15coord: 369..452
score: 1.6E-21coord: 482..529
score: 3.
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 250..335
score: 8.6E-16coord: 371..458
score: 6.94E-24coord: 490..531
score: 6.94
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 64..117
score: 2.2E-267coord: 213..538
score: 2.2E-267coord: 151..188
score: 2.2E
NoneNo IPR availablePANTHERPTHR23139:SF61SUBFAMILY NOT NAMEDcoord: 151..188
score: 2.2E-267coord: 64..117
score: 2.2E-267coord: 213..538
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g04920Cucsa.365600Cucumber (Gy14) v1cgycpeB0950
Cp4.1LG12g04920CmaCh17G005750Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g04920CmaCh08G000920Cucurbita maxima (Rimu)cmacpeB906
Cp4.1LG12g04920CmoCh08G000960Cucurbita moschata (Rifu)cmocpeB842
Cp4.1LG12g04920CmoCh17G005570Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g04920Cla007159Watermelon (97103) v1cpewmB143
Cp4.1LG12g04920Csa6G022350Cucumber (Chinese Long) v2cpecuB148
Cp4.1LG12g04920MELO3C011498Melon (DHL92) v3.5.1cpemeB130
Cp4.1LG12g04920ClCG08G003940Watermelon (Charleston Gray)cpewcgB151
Cp4.1LG12g04920CSPI06G02880Wild cucumber (PI 183967)cpecpiB150
Cp4.1LG12g04920Lsi08G003240Bottle gourd (USVL1VR-Ls)cpelsiB128
Cp4.1LG12g04920MELO3C011498.2Melon (DHL92) v3.6.1cpemedB158
Cp4.1LG12g04920CsaV3_6G003130Cucumber (Chinese Long) v3cpecucB0172
Cp4.1LG12g04920CsGy6G002960Cucumber (Gy14) v2cgybcpeB728
Cp4.1LG12g04920Carg04919Silver-seed gourdcarcpeB0120
Cp4.1LG12g04920Carg22626Silver-seed gourdcarcpeB0310
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g04920Cp4.1LG17g09970Cucurbita pepo (Zucchini)cpecpeB172
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g04920Cucumber (Gy14) v2cgybcpeB726
Cp4.1LG12g04920Cucumber (Chinese Long) v3cpecucB0170
Cp4.1LG12g04920Wax gourdcpewgoB0198
Cp4.1LG12g04920Cucumber (Gy14) v1cgycpeB0949
Cp4.1LG12g04920Wild cucumber (PI 183967)cpecpiB148
Cp4.1LG12g04920Cucumber (Chinese Long) v2cpecuB146