Cp4.1LG12g03280 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g03280
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHuntingtin-interacting K-like protein
LocationCp4.1LG12 : 2146617 .. 2149254 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAGCTAGTTCTACAGTTTGTCTTGAGTTGGGCTTGGGCTTGGGCTCGTTCTACTGTTTGTGCTTTGGGTTGGGCTTGAGCTTGGGCTTGGGCTTCAGCTCGTTTTACTATTTGGGCTTAGGTTGGGCTGAAATTTGGGCTTTGTACTTTTATGGACGCCGCTTTTCTCCAACTAACTTTAGTGGGCTTATCGACGTTCGGGCTCATCTGGATCGGGCTTACGTTTTATTTTTGGGCTTGAAGTTGGGCTTGAAGTAGTAGCGGATCAGTTCTTGTGGGCTTTCTCTAAGAATTGGGCTTTGCGCTCAGGCTCGAGTTGGGCTCTTTACTTATTGGGCTTGATTTTGGGGTCGCGCTGAAGACTATTGGGCTTTAATTTGGGCCTGGACGACGCTCTTTGTAGTCTGTCTCAGTGGATTGTCCCATAGTCGTCGAGTTGGAAATTGTAACCGAGGGTTAGCTGTTCTTAGCTCCTTGCCGTCGCCGATTTGTTACGATTCTCAGTTGCAGCAGGTTCTTCGAGTGTTGCTAAAAATCACAGAAAATACTGCTACGTTGTGAGTTTGAGAATTCACAGAAAATGGAAGCGGGAGACGATGGAGTCGAGAGTCTGGTAGATTCGAAGGATATGCAGCAACAGAGCAAAGCCTTCGATAAGCTCACTGATCGCGTTGAAGACCGGCAACTCGATTCCACTCGTGTTCAAGAGGTATTTACTTCTGCCAATACGCCTCGCTTTTGCATTCTTGCTTAGAACAGGAAGGAATTGACTAGAAATTTAGCTGACCTAACTAAGTTGGGAGTTAATGCTAATCTTGCCTCGGGAGTTGAGAGGAACTTTGTATTTTTGTTCATTTTAATTTTACATATATTGTCATTTCGTTCTTATCAGTTTCTTCGAATTTACGCTGTTTAGAATCTCATGTAGAAATTAATAGCGTGAACAAGTTTTTCAATTCAATGTTTTTGTTTGTGATCGAATGGCAGGCAATGGCATCTATTGCTGCATCGGCCGAAGCCGATTGGAACGCGATGATGTTGAGGTAGGTGTAGAAATCCTGGATTTCCCCTCTTTAATATATATGCCAAATGATGAACGCCATGTATTTGTGAAATTTTGGTTATTAAGAGACTTGGAATTGTTGGCAAATAATGAGTTCTTTAAGATCATTGGGACTCTTTATTGTGTGAACTTTGCTCCATTTTATGTTTTTTCAGGCCCCATTGACTCTGTTTTGTTCTTGAAAATTGAGCTTGATTTCGTTGTTTTGTTATCATGTTATCTAATTTTAGAGTTTTTCAAAATGAAAGTAAAGTTTTGATAGAAGTCGAATAGTTATCAAATAGGGCCTCTTGCGGTGCCTCTTCCTTGTAGTGCCTCTTGTGTTATATCGTATACCACATTTCTATTGAGCTACAAAACGTTATGTCGTATTGTAAGATCCCACATCGATTGGAGAGTGAAACGAGTGCCAGCAAGGACGTTGAGCCTCGAAGGGGGATGGATCATGAGATCCCACATCAGTTGGGGTGGAGAACGAAACATTCTTTATAAGGGTTTTGAAACCTCTCCCTAGTAGACGCATTTTAAAAACCTTGAAAGGAAGTTCGAAAGAGAAAGCCCAAAGAGGACAATATTTGTTAGCGGTGGGCTTGGGTTGTTACACATATAAACTTGATGGTTGATGTTCATTCACAGTAATCGTCCTCTTTTTTCTTTTTTTTGCTTCAATATTCAATAACTTGCTTGTTTGGTTGTCCAAATTTCAATACTTGCCAACAAAACTGCGAAGATTTGAATTTTCGAACTGTCTTTTGTATGTTTGTGAAGATCTGATGAGTGTTTTCCATACACAGCTATGTTTTTCCAGCTACGATGCTTGTTGAATTCTTAGCATGGATTTTTTCTAAGATGTCATTGTCTTTTGCCTTTCAGAGAGAAGGAGCTTGCTGCTGTCAAAATAAACGCAGCTGATGTCGACATAATCGCAAACGAACTCGAGGTTTGATTCACATTTGTCCTGTCTCCAATCATCAATGTAGTAGATAGATAACAGCTTATTATAAGCTTCATGGCATCAGCTTGTTTCAAGTTCTAATTCATTCCCATCTTTCCCCGTACTGTTTACAGTTGGACAAGAAGGTTGCCGAGAGAACCTTGCGCGAGCACAAAGGCGACGCGGTTGCTGCTATACGGTATTTACTACGCTGATTCATCAGGTGTTTGAAGAGACTCTGTTTACTTATTACTTGAAGTTTTACTGGGAAAACTATTCTGAAGTGCACAAGTGAGAATCATAAACATACTTTTTGTGAGTTCAGATTGTATGGAAATGCTGGAAGTTTCTTCTTTTTTCTTCTTTGTAAACCTTAAATATTAGTTCTAAATCTCTTTGCTGAAGGGGTGATTCGATGAAATTGGCCATGTCTTTAAAGCCATTTGATGATACCCAGATAATCTGTGGTAGGTTGGTGTTTAAAAAGGTTTCAATACGTTCACGGGATTTATGCACATACCCCATAAATGGTTCCATCTGAGGTGGAAAAGACCGAAAAGAACCGATGAAACCCGAGTTTAACCTAATTCATAGGGTCATATTTGTAATTTTATTTATTTGAAATTTGTGTCTATTTGGT

mRNA sequence

TTGAGCTAGTTCTACAGTTTGTCTTGAGTTGGGCTTGGGCTTGGGCTCGTTCTACTGTTTGTGCTTTGGGTTGGGCTTGAGCTTGGGCTTGGGCTTCAGCTCGTTTTACTATTTGGGCTTAGGTTGGGCTGAAATTTGGGCTTTGTACTTTTATGGACGCCGCTTTTCTCCAACTAACTTTAGTGGGCTTATCGACGTTCGGGCTCATCTGGATCGGGCTTACGTTTTATTTTTGGGCTTGAAGTTGGGCTTGAAGTAGTAGCGGATCAGTTCTTGTGGGCTTTCTCTAAGAATTGGGCTTTGCGCTCAGGCTCGAGTTGGGCTCTTTACTTATTGGGCTTGATTTTGGGGTCGCGCTGAAGACTATTGGGCTTTAATTTGGGCCTGGACGACGCTCTTTGTAGTCTGTCTCAGTGGATTGTCCCATAGTCGTCGAGTTGGAAATTGTAACCGAGGGTTAGCTGTTCTTAGCTCCTTGCCGTCGCCGATTTGTTACGATTCTCAGTTGCAGCAGGTTCTTCGAGTGTTGCTAAAAATCACAGAAAATACTGCTACGTTGTGAGTTTGAGAATTCACAGAAAATGGAAGCGGGAGACGATGGAGTCGAGAGTCTGGTAGATTCGAAGGATATGCAGCAACAGAGCAAAGCCTTCGATAAGCTCACTGATCGCGTTGAAGACCGGCAACTCGATTCCACTCGTGTTCAAGAGGCAATGGCATCTATTGCTGCATCGGCCGAAGCCGATTGGAACGCGATGATGTTGAGAGAGAAGGAGCTTGCTGCTGTCAAAATAAACGCAGCTGATGTCGACATAATCGCAAACGAACTCGAGTTGGACAAGAAGGTTGCCGAGAGAACCTTGCGCGAGCACAAAGGCGACGCGGTTGCTGCTATACGGTATTTACTACGCTGATTCATCAGGTGTTTGAAGAGACTCTGTTTACTTATTACTTGAAGTTTTACTGGGAAAACTATTCTGAAGTGCACAAGTGAGAATCATAAACATACTTTTTGTGAGTTCAGATTGTATGGAAATGCTGGAAGTTTCTTCTTTTTTCTTCTTTGTAAACCTTAAATATTAGTTCTAAATCTCTTTGCTGAAGGGGTGATTCGATGAAATTGGCCATGTCTTTAAAGCCATTTGATGATACCCAGATAATCTGTGGTAGGTTGGTGTTTAAAAAGGTTTCAATACGTTCACGGGATTTATGCACATACCCCATAAATGGTTCCATCTGAGGTGGAAAAGACCGAAAAGAACCGATGAAACCCGAGTTTAACCTAATTCATAGGGTCATATTTGTAATTTTATTTATTTGAAATTTGTGTCTATTTGGT

Coding sequence (CDS)

ATGGAAGCGGGAGACGATGGAGTCGAGAGTCTGGTAGATTCGAAGGATATGCAGCAACAGAGCAAAGCCTTCGATAAGCTCACTGATCGCGTTGAAGACCGGCAACTCGATTCCACTCGTGTTCAAGAGGCAATGGCATCTATTGCTGCATCGGCCGAAGCCGATTGGAACGCGATGATGTTGAGAGAGAAGGAGCTTGCTGCTGTCAAAATAAACGCAGCTGATGTCGACATAATCGCAAACGAACTCGAGTTGGACAAGAAGGTTGCCGAGAGAACCTTGCGCGAGCACAAAGGCGACGCGGTTGCTGCTATACGGTATTTACTACGCTGA

Protein sequence

MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMMLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR
Homology
[Close]
BLAST of Cp4.1LG12g03280 vs. Swiss-Prot
Match: HYPK_MACFA (Huntingtin-interacting protein K OS=Macaca fascicularis GN=HYPK PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-08
Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 1 

Query: 25  DKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMMLREKELAAVKINAADVDIIANELE 84
           +++TD  E++++ S+ ++ AM+ I      +  A   REKELA V I   D+++I  E+E
Sbjct: 44  ERVTDYAEEKEIQSSNLETAMSVIGDRRSREQKAKQEREKELAKVTIKKEDLELIMTEME 103

Query: 85  LDKKVAERTLREHKGDAVAAI 106
           + +  AER+LREH G+ V A+
Sbjct: 104 ISRAAAERSLREHMGNVVEAL 124

[Close]
BLAST of Cp4.1LG12g03280 vs. Swiss-Prot
Match: HYPK_MOUSE (Huntingtin-interacting protein K OS=Mus musculus GN=Hypk PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-08
Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 1 

Query: 25  DKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMMLREKELAAVKINAADVDIIANELE 84
           +++TD  E++++ S+ ++ AM+ I      +  A   REKELA V I   D+++I  E+E
Sbjct: 44  ERVTDYAEEKEIQSSNLETAMSVIGDRRSREQKAKQEREKELAKVTIKKEDLELIMTEME 103

Query: 85  LDKKVAERTLREHKGDAVAAI 106
           + +  AER+LREH G+ V A+
Sbjct: 104 ISRAAAERSLREHMGNVVEAL 124

[Close]
BLAST of Cp4.1LG12g03280 vs. Swiss-Prot
Match: HYPK_HUMAN (Huntingtin-interacting protein K OS=Homo sapiens GN=HYPK PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-08
Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 1 

Query: 25  DKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMMLREKELAAVKINAADVDIIANELE 84
           +++TD  E++++ S+ ++ AM+ I      +  A   REKELA V I   D+++I  E+E
Sbjct: 44  ERVTDYAEEKEIQSSNLETAMSVIGDRRSREQKAKQEREKELAKVTIKKEDLELIMTEME 103

Query: 85  LDKKVAERTLREHKGDAVAAI 106
           + +  AER+LREH G+ V A+
Sbjct: 104 ISRAAAERSLREHMGNVVEAL 124

[Close]
BLAST of Cp4.1LG12g03280 vs. TrEMBL
Match: A0A0A0KI65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G330980 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-48
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           MEAGDDG+E LVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM
Sbjct: 1   MEAGDDGIERLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111
           LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR
Sbjct: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 110

[Close]
BLAST of Cp4.1LG12g03280 vs. TrEMBL
Match: A2Q2W3_MEDTR (Huntingtin-interacting K-like protein OS=Medicago truncatula GN=MTR_2g034010 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-45
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           ME GD+GVE +VDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAM 
Sbjct: 1   MEGGDEGVEMVVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMR 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLL 110
           LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIR+LL
Sbjct: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLL 109

[Close]
BLAST of Cp4.1LG12g03280 vs. TrEMBL
Match: A0A0L9TSM7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g298300 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.2e-43
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           ME  +DG+E +VDSKDMQQQ+KAFDKLTDRVEDRQLDS+RVQEAMASIAASAEADW AM 
Sbjct: 1   MEGAEDGIERVVDSKDMQQQTKAFDKLTDRVEDRQLDSSRVQEAMASIAASAEADWQAMR 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111
           LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIR+LLR
Sbjct: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 110

[Close]
BLAST of Cp4.1LG12g03280 vs. TrEMBL
Match: A5C838_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00910 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-43
Identity = 98/110 (89.09%), Postives = 104/110 (94.55%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           ME  D+G++ +VDSKD+QQQSKA DKLTD VEDRQLDSTRVQEAMASIAASAEADWNAM 
Sbjct: 1   MEVADEGIDRVVDSKDLQQQSKALDKLTDHVEDRQLDSTRVQEAMASIAASAEADWNAMR 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111
           +REKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR
Sbjct: 61  MREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 110

[Close]
BLAST of Cp4.1LG12g03280 vs. TrEMBL
Match: I1MRR2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G033800 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.0e-43
Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           ME  D+G+E +VDSKD+QQQSKAFDKLTDRVEDRQLDS+RVQEAMASIAASAEADW AM 
Sbjct: 1   MEGADEGIERVVDSKDLQQQSKAFDKLTDRVEDRQLDSSRVQEAMASIAASAEADWQAMR 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111
           +REKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIR+LLR
Sbjct: 61  MREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 110

[Close]
BLAST of Cp4.1LG12g03280 vs. TAIR10
Match: AT3G06610.1 (AT3G06610.1 DNA-binding enhancer protein-related)

HSP 1 Score: 149.8 bits (377), Expect = 9.6e-37
Identity = 84/107 (78.50%), Postives = 91/107 (85.05%), Query Frame = 1 

Query: 3   AGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMMLR 62
           A + G E  VDSKD+QQQSKAFDKLTDRVEDRQLDS+RVQ AMASIAAS EAD NA  LR
Sbjct: 4   AEEAGAEIAVDSKDLQQQSKAFDKLTDRVEDRQLDSSRVQSAMASIAASREADLNAKRLR 63

Query: 63  EKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLL 110
           EKELA+VKIN ADV+ I NELE++K VAERTLREHKGDAVAA R LL
Sbjct: 64  EKELASVKINPADVEFIVNELEIEKNVAERTLREHKGDAVAATRQLL 110

[Close]
BLAST of Cp4.1LG12g03280 vs. NCBI nr
Match: gi|449462146|ref|XP_004148802.1| (PREDICTED: huntingtin-interacting protein K [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 3.0e-48
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           MEAGDDG+E LVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM
Sbjct: 1   MEAGDDGIERLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111
           LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR
Sbjct: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 110

[Close]
BLAST of Cp4.1LG12g03280 vs. NCBI nr
Match: gi|659116962|ref|XP_008458350.1| (PREDICTED: huntingtin-interacting protein K [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 8.8e-48
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           MEAGDDG+E LVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM
Sbjct: 1   MEAGDDGIERLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLL 110
           LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLL
Sbjct: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLL 109

[Close]
BLAST of Cp4.1LG12g03280 vs. NCBI nr
Match: gi|357448911|ref|XP_003594731.1| (huntingtin-interacting K-like protein [Medicago truncatula])

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-45
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           ME GD+GVE +VDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAM 
Sbjct: 1   MEGGDEGVEMVVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMR 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLL 110
           LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIR+LL
Sbjct: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLL 109

[Close]
BLAST of Cp4.1LG12g03280 vs. NCBI nr
Match: gi|1009132080|ref|XP_015883192.1| (PREDICTED: huntingtin-interacting protein K [Ziziphus jujuba])

HSP 1 Score: 188.7 bits (478), Expect = 5.3e-45
Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 1 

Query: 1   MEAG-DDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAM 60
           ME G D+GVE +VDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAM
Sbjct: 1   MEGGADEGVERVVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAM 60

Query: 61  MLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111
            LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR
Sbjct: 61  RLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111

[Close]
BLAST of Cp4.1LG12g03280 vs. NCBI nr
Match: gi|502080371|ref|XP_004486542.1| (PREDICTED: huntingtin-interacting protein K [Cicer arietinum])

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-44
Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 1 

Query: 1   MEAGDDGVESLVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMM 60
           ME GD+GVE +VDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWN M 
Sbjct: 1   MEGGDEGVEMVVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNVMR 60

Query: 61  LREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLR 111
           +REKELAAVKIN A+VDIIANELELDKKVAERTLREHKGDAVAAIR+LLR
Sbjct: 61  MREKELAAVKINPAEVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 110

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g03280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HYPK_MACFA5.2e-0837.04Huntingtin-interacting protein K OS=Macaca fascicularis GN=HYPK PE=2 SV=1[more]
HYPK_MOUSE5.2e-0837.04Huntingtin-interacting protein K OS=Mus musculus GN=Hypk PE=1 SV=2[more]
HYPK_HUMAN5.2e-0837.04Huntingtin-interacting protein K OS=Homo sapiens GN=HYPK PE=1 SV=2[more]
BLAST of Cp4.1LG12g03280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI65_CUCSA2.1e-4898.18Uncharacterized protein OS=Cucumis sativus GN=Csa_6G330980 PE=4 SV=1[more]
A2Q2W3_MEDTR1.7e-4594.50Huntingtin-interacting K-like protein OS=Medicago truncatula GN=MTR_2g034010 PE=... [more]
A0A0L9TSM7_PHAAN1.2e-4390.00Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g298300 PE=4 SV=1[more]
A5C838_VITVI1.6e-4389.09Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00910 PE=4 SV=... [more]
I1MRR2_SOYBN2.0e-4389.09Uncharacterized protein OS=Glycine max GN=GLYMA_17G033800 PE=4 SV=1[more]
BLAST of Cp4.1LG12g03280 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06610.19.6e-3778.50 DNA-binding enhancer protein-related[more]
BLAST of Cp4.1LG12g03280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462146|ref|XP_004148802.1|3.0e-4898.18PREDICTED: huntingtin-interacting protein K [Cucumis sativus][more]
gi|659116962|ref|XP_008458350.1|8.8e-4898.17PREDICTED: huntingtin-interacting protein K [Cucumis melo][more]
gi|357448911|ref|XP_003594731.1|2.4e-4594.50huntingtin-interacting K-like protein [Medicago truncatula][more]
gi|1009132080|ref|XP_015883192.1|5.3e-4594.59PREDICTED: huntingtin-interacting protein K [Ziziphus jujuba][more]
gi|502080371|ref|XP_004486542.1|4.5e-4490.91PREDICTED: huntingtin-interacting protein K [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g03280.1Cp4.1LG12g03280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 80..100
scor
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 71..107
score: 1.
NoneNo IPR availablePANTHERPTHR31184FAMILY NOT NAMEDcoord: 1..110
score: 7.2
NoneNo IPR availablePANTHERPTHR31184:SF3SUBFAMILY NOT NAMEDcoord: 1..110
score: 7.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g03280CmaCh17G003700Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g03280CmoCh17G003600Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g03280CmoCh08G012450Cucurbita moschata (Rifu)cmocpeB833
Cp4.1LG12g03280Cla009242Watermelon (97103) v1cpewmB161
Cp4.1LG12g03280Csa6G330980Cucumber (Chinese Long) v2cpecuB154
Cp4.1LG12g03280MELO3C021266Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g03280ClCG06G004560Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g03280CSPI06G17800Wild cucumber (PI 183967)cpecpiB156
Cp4.1LG12g03280Lsi09G014940Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g03280MELO3C021266.2Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g03280CsaV3_6G028590Cucumber (Chinese Long) v3cpecucB0178
Cp4.1LG12g03280Bhi12G001731Wax gourdcpewgoB0173
Cp4.1LG12g03280CsGy6G017400Cucumber (Gy14) v2cgybcpeB733
Cp4.1LG12g03280Carg05551Silver-seed gourdcarcpeB0099
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g03280Cp4.1LG17g00150Cucurbita pepo (Zucchini)cpecpeB158
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g03280Cucurbita pepo (Zucchini)cpecpeB109
Cp4.1LG12g03280Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG12g03280Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG12g03280Cucumber (Gy14) v1cgycpeB0671
Cp4.1LG12g03280Cucurbita maxima (Rimu)cmacpeB258
Cp4.1LG12g03280Cucurbita maxima (Rimu)cmacpeB812
Cp4.1LG12g03280Cucurbita maxima (Rimu)cmacpeB895
Cp4.1LG12g03280Cucurbita moschata (Rifu)cmocpeB222
Cp4.1LG12g03280Cucurbita moschata (Rifu)cmocpeB225
Cp4.1LG12g03280Cucurbita moschata (Rifu)cmocpeB766
Cp4.1LG12g03280Wild cucumber (PI 183967)cpecpiB133
Cp4.1LG12g03280Cucumber (Chinese Long) v2cpecuB132
Cp4.1LG12g03280Bottle gourd (USVL1VR-Ls)cpelsiB115
Cp4.1LG12g03280Watermelon (Charleston Gray)cpewcgB139
Cp4.1LG12g03280Watermelon (Charleston Gray)cpewcgB133
Cp4.1LG12g03280Watermelon (97103) v1cpewmB140
Cp4.1LG12g03280Watermelon (97103) v1cpewmB152
Cp4.1LG12g03280Melon (DHL92) v3.5.1cpemeB140
Cp4.1LG12g03280Cucumber (Gy14) v2cgybcpeB179
Cp4.1LG12g03280Cucumber (Gy14) v2cgybcpeB303
Cp4.1LG12g03280Melon (DHL92) v3.6.1cpemedB170
Cp4.1LG12g03280Silver-seed gourdcarcpeB0393
Cp4.1LG12g03280Silver-seed gourdcarcpeB0984
Cp4.1LG12g03280Cucumber (Chinese Long) v3cpecucB0149
Cp4.1LG12g03280Cucumber (Chinese Long) v3cpecucB0154
Cp4.1LG12g03280Cucumber (Chinese Long) v3cpecucB0175
Cp4.1LG12g03280Wax gourdcpewgoB0170
Cp4.1LG12g03280Wax gourdcpewgoB0186
Cp4.1LG12g03280Wax gourdcpewgoB0188