Cp4.1LG12g02850 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g02850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DAG protein
Location	Cp4.1LG12 : 1938078 .. 1940633 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCTTCCCCAAAACCTCCTTAAAATCCCGATTCAACCAAAAATAACCTACGGTGTTATTCCGCCACTATCAAGCTTTCAACAATGGCCGCTCGTCGAACATTTTTCTCTGTCCTTAGCCGAAGCTTCTCCTCTTCTTCTTCTTCTTCCTTCTCTCTTCCGTCTTCTATTTCTTCTCGCCTGAGATTTGCTTTTCCTCTGCTCGACAGACAGAGTCGAATAATCCCTAATTCATTCAATTTTCCAGTTCGATTCAGGACTTCGGGGTCCGGATACTCTCCACTCAATGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGTGATTACGAGCATTGGCTGATCGTGATGGAGTTTCCAAATGATCCGAAACCTTCGGAGGAGGAGATGGTGAACTCTTATGTCAAAACTCTAGCCGCTGTTGTGGGAAGGTATCGGAATGAAACAACTTATTATACGCGGATTACTTATTGGTGTGTCTTTTGCTTGGATTATCTCGTTTGTTGATTTTAGGGTTTTCGTTTTCTTATGATTCTCAGCGAAGAAGAGGCGAAGAAGAAAATTTACTCTGTCAGTACAAGTACGTATACTGGCTTTGGTGCCTTGATTTCGGAAGAGCTGTCTTACAAAGTGAAAGGTAATAGTTTCTGTGCGCGTTGTGATTAGATTAAGGAGCTTTGGGAATTTGATTTGTTCTTCTTTTATTTGTTTGGATTTTGTTGATTATTTGGATTACAATTGAAGATTGAAAATTGTAGTTTTGAGCTCAAGCACACCATATGTTTGATGAAAGTTCCCTCATGAATTTGATTAGTTAAAGCTCCCATTAATGATCATAACTTGATTATGGTACACTCATTTGAATTCTTATCATGGTTTGTATGTTGAAACCAAATATGTGGAACTAGAATTTATAAGCTTAATTTTCAAGAACCAAAAACCCGAAAATCAATTAGTTATCAAACTACGCTTAAGAACTTTCCCGTGAAGTTTGCTGTAGAATTCACTCGAGTATTGGTATGTATTATTTTGTGACGTTTTTTGGATTAAAATCAAAGATCGAAAGAGTATTTTTTTGAAGAACTTTTCCCTTTCTATTTTAAAGTTGTGCTTTAGTGTAACGACCCAAGCCTACCGCTAGCAGATATTGTCTTCTTTGGATTTTCCCTTTCGGGCTTCCCCTCAAGCCTTTAAAATGTGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACACCACAATCCACCCCCTTTTGGGGCCGGCATCCTTGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCGCCCCCAAATCCACCCCCTTTGGGGCCCAGCGTCCTTATTGGCACACTGCCTCGTGTCTACCCCCTTCGGGGAACAGCGAGAAGACTAGCACATCATTCGGTGTCTGGCTCTGATACCATTTGTAACGACTCAGACCCACCGCTAGCAGATATTGTCTCTTTGGGCTTTCCTTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCGAGGGGAATGTTTCCACACCCTTATAAAGGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACATTTAGAATCAACTCGATTACAGTTTTATCATTCTTGTGTTACCACTGTGAAGGTTTGACATTGTTTTGTGATGATTTCTATTTGGTTTTTGTAAAGAACAATAATGGCTGACTTGAGCTCTTTGTTCCCATGAAACAGAATTGCCAGGAGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTATGGAGGTGATTACTCTTCTAAACTCTATGGAATTGATATAAATTGAAACCAGTTGGATTTCTCAAGTTAAATGCTCATTGCTTGTTCGAGTTTTTCGTGTTGTTTTCAGGTGATCTGTTCATTGATGGAAAGGTCTACCCAAGACCGCAGTATAGGTACACCGATAGGCAACAATCTGGAAGAGTTAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGGAGCCAACCGATTCAGAGACAAAGCTGGGGTCAAGACCAGAGAGATCCAATGCAGCAACCACCACCATCCATGGACGGTCAAAATACAGCTCGAAGTGGTGTCGGAGATTTCTCGACAAATCCAGGCGAGTTAAATCGGGGTAATCACTGATTGATGGATGCTTGAAAATTTGAATATTTATCGATTCCTTAATGCATGAAGTTTAGGCATCATATGTCTAGATTGGTCTGGATTTTTGTCACTCCTCTACGTATCATATGAGATTCTACGAGTTCTTAATACTCTTAGATCAAGTCTAGACATCATAATATCTAGCATCTAAATGCATTGAAATGTGAATATTTAGTATGTTGACTAGAATCCTTGATATTGGGAATGATTGAACTACATTGATCTTTCCTTCTTCTTGGTTGTTCTCTCATTGTTTTCCAGCTGATCTGATGAAATTTCACATGATTTTGTTATTTATTTATTTTGA

mRNA sequence

GCTTCTTCCCCAAAACCTCCTTAAAATCCCGATTCAACCAAAAATAACCTACGGTGTTATTCCGCCACTATCAAGCTTTCAACAATGGCCGCTCGTCGAACATTTTTCTCTGTCCTTAGCCGAAGCTTCTCCTCTTCTTCTTCTTCTTCCTTCTCTCTTCCGTCTTCTATTTCTTCTCGCCTGAGATTTGCTTTTCCTCTGCTCGACAGACAGAGTCGAATAATCCCTAATTCATTCAATTTTCCAGTTCGATTCAGGACTTCGGGGTCCGGATACTCTCCACTCAATGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGTGATTACGAGCATTGGCTGATCGTGATGGAGTTTCCAAATGATCCGAAACCTTCGGAGGAGGAGATGGTGAACTCTTATGTCAAAACTCTAGCCGCTGTTGTGGGAAGCGAAGAAGAGGCGAAGAAGAAAATTTACTCTGTCAGTACAAGTACGTATACTGGCTTTGGTGCCTTGATTTCGGAAGAGCTGTCTTACAAAGTGAAAGAATTGCCAGGAGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTATGGAGGTGATCTGTTCATTGATGGAAAGGTCTACCCAAGACCGCAGTATAGGTACACCGATAGGCAACAATCTGGAAGAGTTAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGGAGCCAACCGATTCAGAGACAAAGCTGGGGTCAAGACCAGAGAGATCCAATGCAGCAACCACCACCATCCATGGACGGTCAAAATACAGCTCGAAGTGGTGTCGGAGATTTCTCGACAAATCCAGGCGAGTTAAATCGGGGTAATCACTGATTGATGGATGCTTGAAAATTTGAATATTTATCGATTCCTTAATGCATGAAGTTTAGGCATCATATGTCTAGATTGGTCTGGATTTTTGTCACTCCTCTACGTATCATATGAGATTCTACGAGTTCTTAATACTCTTAGATCAAGTCTAGACATCATAATATCTAGCATCTAAATGCATTGAAATGTGAATATTTAGTATGTTGACTAGAATCCTTGATATTGGGAATGATTGAACTACATTGATCTTTCCTTCTTCTTGGTTGTTCTCTCATTGTTTTCCAGCTGATCTGATGAAATTTCACATGATTTTGTTATTTATTTATTTTGA

Coding sequence (CDS)

ATGGCCGCTCGTCGAACATTTTTCTCTGTCCTTAGCCGAAGCTTCTCCTCTTCTTCTTCTTCTTCCTTCTCTCTTCCGTCTTCTATTTCTTCTCGCCTGAGATTTGCTTTTCCTCTGCTCGACAGACAGAGTCGAATAATCCCTAATTCATTCAATTTTCCAGTTCGATTCAGGACTTCGGGGTCCGGATACTCTCCACTCAATGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGTGATTACGAGCATTGGCTGATCGTGATGGAGTTTCCAAATGATCCGAAACCTTCGGAGGAGGAGATGGTGAACTCTTATGTCAAAACTCTAGCCGCTGTTGTGGGAAGCGAAGAAGAGGCGAAGAAGAAAATTTACTCTGTCAGTACAAGTACGTATACTGGCTTTGGTGCCTTGATTTCGGAAGAGCTGTCTTACAAAGTGAAAGAATTGCCAGGAGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTATGGAGGTGATCTGTTCATTGATGGAAAGGTCTACCCAAGACCGCAGTATAGGTACACCGATAGGCAACAATCTGGAAGAGTTAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGGAGCCAACCGATTCAGAGACAAAGCTGGGGTCAAGACCAGAGAGATCCAATGCAGCAACCACCACCATCCATGGACGGTCAAAATACAGCTCGAAGTGGTGTCGGAGATTTCTCGACAAATCCAGGCGAGTTAAATCGGGGTAATCACTGA

Protein sequence

MAARRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPPPSMDGQNTARSGVGDFSTNPGELNRGNH

Homology

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BLAST of Cp4.1LG12g02850 vs. Swiss-Prot
Match: MORF3_ARATH (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana GN=MORF3 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.4e-84
Identity = 164/226 (72.57%), Postives = 189/226 (83.63%), Query Frame = 1


Query: 1   MAARRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDR--QSRIIPNSFNFPVRFR 60
           ++ RRT  ++L+++ SSS+S S S P+ +SSR RFA PL+++   SR          R +
Sbjct: 4   ISTRRTLSTLLNKTLSSSTSYSSSFPT-LSSRSRFAMPLIEKVSSSRTSLGPCYISTRPK 63

Query: 61  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTL 120
           TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF  DPKP+EEEM+NSYVKTL
Sbjct: 64  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTL 123

Query: 121 AAVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 180
            +V+G EEEAKKKIYSV TSTYTGFGALISEELS KVK LPGVLWVLPDSYLDVPNKDYG
Sbjct: 124 TSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYG 183

Query: 181 GDLFIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQP 225
           GDL+++GKV PRPQYR+T+ Q+  R RPRPRYDRRRETMQVER +P
Sbjct: 184 GDLYVEGKVIPRPQYRFTE-QRHTRPRPRPRYDRRRETMQVERREP 226

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BLAST of Cp4.1LG12g02850 vs. Swiss-Prot
Match: MORF8_ARATH (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MORF8 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.3e-48
Identity = 117/238 (49.16%), Postives = 156/238 (65.55%), Query Frame = 1


Query: 10  VLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLND 69
           + +RSF+SS+  + S  SS+ SR R   PL+   S +        V+  ++ +  S LND
Sbjct: 21  LFTRSFASSAPLAKSPASSLLSRSR---PLVAAFSSVFRGGL-VSVKGLSTQATSSSLND 80

Query: 70  PSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAK 129
           P+PNWSNRPPKETILLDGCD+EHWL+V+E P   +P+ +E+++SY+KTLA +VGSE+EA+
Sbjct: 81  PNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEAR 140

Query: 130 KKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYP 189
            KIYSVST  Y  FGAL+SE+LS+K+KEL  V WVLPDSYLDV NKDYGG+ FIDGK  P
Sbjct: 141 MKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVP 200

Query: 190 -RPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWG---QDQRDPMQQPPP 244
             P+Y     + + R   R R + R       R+   +R++       QR PM  PPP
Sbjct: 201 YDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQRPPMGGPPP 253

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BLAST of Cp4.1LG12g02850 vs. Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 96/219 (43.84%), Postives = 133/219 (60.73%), Query Frame = 1


Query: 9   SVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFP-VRFRTSGSGYSPL 68
           S+L ++ + +S +   L S +S+    +F    R   I   S  +P VR  T G   S  
Sbjct: 7   SLLPKTLTPNSKTLAPLLSILSTS-SLSFLPCTRPHPIKSRSAAYPTVRALTDGEYSSRR 66

Query: 69  NDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEE 128
           N+ + N      +ETI+L GCDY HWLIVMEFP DP P+ E+M+++Y+ TLA V+GS EE
Sbjct: 67  NNNNNNSGEE--RETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEE 126

Query: 129 AKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKV 188
           AKK +Y+ ST+TYTGF   ++EE S K K LPGVLWVLPDSY+DV NKDYGGD +++G++
Sbjct: 127 AKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEI 186

Query: 189 YPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQ 227
            P     Y  +Q          Y R+R+    E+ +P Q
Sbjct: 187 IPCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQRRPKQ 222

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BLAST of Cp4.1LG12g02850 vs. Swiss-Prot
Match: MORF9_ARATH (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana GN=MORF9 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.1e-38
Identity = 105/244 (43.03%), Postives = 139/244 (56.97%), Query Frame = 1


Query: 14  SFSSSSSSSFSLPS--SISSRLRFAF-----------PLLDRQSRIIPNSFNFPVRFRTS 73
           SF+++SSSS  L +   +S   RF+            PLL   S          V+  T 
Sbjct: 3   SFTTTSSSSLLLKTLLPVSHLNRFSTLSGIRVGDSWTPLLRNISTAGSRRRVAIVKAATV 62

Query: 74  GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA 133
            S YS     S   ++   +ETI+L GCDY HWLIVMEFP DP PS ++M+++Y+ TLA 
Sbjct: 63  DSDYS-----SKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLAT 122

Query: 134 VVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 193
           V+GS EEAKK +Y+ ST+TYTGF   I EE S K K LPGVLWVLPDSY+DV NKDYGGD
Sbjct: 123 VLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGD 182

Query: 194 LFIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ 245
            +I+G++ P     Y  +Q++       RY+R+R+        P        +QR P Q+
Sbjct: 183 KYINGEIIPCTYPTYQPKQRNNTKYQSKRYERKRD------GPP------PPEQRKPRQE 229

[Close]

BLAST of Cp4.1LG12g02850 vs. Swiss-Prot
Match: MORF2_ARATH (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana GN=MORF2 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37
Identity = 96/205 (46.83%), Postives = 126/205 (61.46%), Query Frame = 1


Query: 19  SSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLNDPSPNWSNRP 78
           S+ +   P  I S + +    L   +R     F+       SGS YSPLN  S N+S+RP
Sbjct: 17  SNVTLMAPPRIPSSVHYGGSRLGCSTRF----FSIRCGANRSGSTYSPLNSGS-NFSDRP 76

Query: 79  PKETI-LLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAKKKIYSVST 138
           P E   L  GCDYEHWLIVM+ P     ++++M++ Y++TLA VVGSEEEAKK+IY+VS 
Sbjct: 77  PTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSC 136

Query: 139 STYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVY---PRPQYR 198
             Y GFG  I EE S K++ LPGVL+VLPDSY+D  NKDYG +LF++G++    P  Q R
Sbjct: 137 ERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRR 196

Query: 199 YTDRQQSGRVRP----RPRYDRRRE 216
              + Q  + RP    R RY RRRE
Sbjct: 197 VEPQPQRAQDRPRYNDRTRYSRRRE 216

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BLAST of Cp4.1LG12g02850 vs. TrEMBL
Match: A0A0A0KCH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318670 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 5.8e-124
Identity = 235/272 (86.40%), Postives = 248/272 (91.18%), Query Frame = 1


Query: 2   AARRTFFSVLSRSFSSSSSSS--FSLPSS-ISSRLRFAFPLLDRQSRIIPNSFNFPVRFR 61
           A RRT F+VLSRS SSSSSSS  F LPS  ISSRLRFAFPLL+RQ +IIP SFN P+RF+
Sbjct: 5   ATRRTLFTVLSRSISSSSSSSSSFLLPSPPISSRLRFAFPLLNRQDQIIPASFNLPIRFK 64

Query: 62  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTL 121
            SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPNDPKPSEEEMVN+YVKTL
Sbjct: 65  ASGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNTYVKTL 124

Query: 122 AAVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 181
           AAVVGSEEEAKKKIYSVST+TYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG
Sbjct: 125 AAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 184

Query: 182 GDLFIDGKVYPRPQYRYTDR-QQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDP 241
           GDLFIDGKV PRPQYRY DR QQ GR RPRPRYDRRRETMQV+R QPIQRQ+WGQ+Q DP
Sbjct: 185 GDLFIDGKVIPRPQYRYHDRPQQPGRNRPRPRYDRRRETMQVDRRQPIQRQNWGQNQSDP 244

Query: 242 MQQPPPSMDGQNTARSGVGDFSTNPGELNRGN 270
           M QPPPSMDGQN  +SG+GDFSTNPGE NR N
Sbjct: 245 M-QPPPSMDGQNRVQSGIGDFSTNPGEFNRSN 275

[Close]

BLAST of Cp4.1LG12g02850 vs. TrEMBL
Match: A5AMS0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01880 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-96
Identity = 193/259 (74.52%), Postives = 213/259 (82.24%), Query Frame = 1


Query: 4   RRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSR-IIPNSFNFPVRFRTSGS 63
           RRT    LSR+ S S SSS  L SS   R RFAF L+D+ S  ++ NS   P R +TSGS
Sbjct: 7   RRTLARFLSRTLSQSFSSSSLLASS---RSRFAFALIDKHSPPLVSNSARVPTRLKTSGS 66

Query: 64  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVV 123
           GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND KPSE+EM+ +YVKTLAAVV
Sbjct: 67  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDSKPSEDEMIAAYVKTLAAVV 126

Query: 124 GSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 183
           GSEEEAKKKIYSV T+TYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF
Sbjct: 127 GSEEEAKKKIYSVCTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 186

Query: 184 IDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPP 243
           IDGKV  RPQYRY +RQ + R RPRPRYDRRRETMQVER +P+QR +W QD+R+PM Q P
Sbjct: 187 IDGKVIHRPQYRYNERQPT-RSRPRPRYDRRRETMQVERREPMQRDNWAQDRREPMHQ-P 246

Query: 244 PSMDGQNTARSGVGDFSTN 262
            SM+ QN+ + G  D S N
Sbjct: 247 TSMNDQNSPQGGGRDPSLN 260

[Close]

BLAST of Cp4.1LG12g02850 vs. TrEMBL
Match: I3S3J6_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.1e-94
Identity = 185/252 (73.41%), Postives = 209/252 (82.94%), Query Frame = 1


Query: 3   ARRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGS 62
           ARRT  S+L+R+ SSSSSS  +      +R RFAF L     + +P   +FPVRF++SGS
Sbjct: 6   ARRTLASILTRALSSSSSSGIAS----LNRTRFAFALSSASRQTLPIPHSFPVRFKSSGS 65

Query: 63  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVV 122
           GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLI+MEFP++PKPSE+EMVNSYVKTLA V+
Sbjct: 66  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVL 125

Query: 123 GSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 182
           GSEEEAKKKIYSVSTSTY GFGAL+SEELSYK+KELPGVLWVLPDSYLDVPNKDYGGDLF
Sbjct: 126 GSEEEAKKKIYSVSTSTYIGFGALVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGDLF 185

Query: 183 IDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPP 242
           +DGKV PRPQYRYT+R  S R RPRPR+DRRRETMQVER  P QRQ+W Q Q + M QP 
Sbjct: 186 VDGKVIPRPQYRYTERAPS-RNRPRPRHDRRRETMQVERRDPNQRQNWNQVQGEHM-QPS 245

Query: 243 PSMDGQNTARSG 255
             M+ QN+A  G
Sbjct: 246 NPMNSQNSASGG 251

[Close]

BLAST of Cp4.1LG12g02850 vs. TrEMBL
Match: A0A072UR55_MEDTR (Plastid developmental protein DAG OS=Medicago truncatula GN=MTR_4g120340 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 8.1e-94
Identity = 184/252 (73.02%), Postives = 208/252 (82.54%), Query Frame = 1


Query: 3   ARRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGS 62
           ARRT  S+L+R+ SSSSSS  +      +R RFAF L     + +P   +FPVRF++SGS
Sbjct: 6   ARRTLASILTRALSSSSSSGIAS----LNRTRFAFALSSASRQTLPIPHSFPVRFKSSGS 65

Query: 63  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVV 122
           GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLI+MEFP++PKPSE+EMVNSYVKTLA V+
Sbjct: 66  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVL 125

Query: 123 GSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 182
           GSEEEAKKKIYSVSTSTY GFGAL+SEELSYK+KELPGVLWVLPDSYLDVPNKDYGGDLF
Sbjct: 126 GSEEEAKKKIYSVSTSTYIGFGALVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGDLF 185

Query: 183 IDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPP 242
           +DGKV PRPQYRY +R  S R RPRPR+DRRRETMQVER  P QRQ+W Q Q + M QP 
Sbjct: 186 VDGKVIPRPQYRYAERAPS-RNRPRPRHDRRRETMQVERRDPNQRQNWNQVQGEHM-QPS 245

Query: 243 PSMDGQNTARSG 255
             M+ QN+A  G
Sbjct: 246 NPMNSQNSASGG 251

[Close]

BLAST of Cp4.1LG12g02850 vs. TrEMBL
Match: A0A103XJ77_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006272 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.8e-93
Identity = 186/256 (72.66%), Postives = 204/256 (79.69%), Query Frame = 1


Query: 4   RRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSG 63
           RRT  S+ SR  SSSSSS       ISSR RFA PLLD   +    +   PVR +TSGSG
Sbjct: 7   RRTLNSLFSRLLSSSSSS-------ISSRSRFALPLLDHHYQSPQLAPRIPVRLKTSGSG 66

Query: 64  YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVG 123
           YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFP DPKPSE+EM+NSYVKTLA+V+G
Sbjct: 67  YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPTDPKPSEDEMINSYVKTLASVLG 126

Query: 124 SEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFI 183
           SEEEAKKKIYSVST+TYTGFGALISEELSYKVK LPGVLWVLPDSYLDVPNKDYGGDLFI
Sbjct: 127 SEEEAKKKIYSVSTTTYTGFGALISEELSYKVKGLPGVLWVLPDSYLDVPNKDYGGDLFI 186

Query: 184 DGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQP-- 243
           DGKV PRPQYR+TDRQQ+ R R RPRYD+RRETMQ  R  P + Q+W +DQRD + QP  
Sbjct: 187 DGKVIPRPQYRFTDRQQNSRPRARPRYDKRRETMQTIRRVPNEGQNWVRDQRDAVTQPTA 246

Query: 244 ----PPSMDGQNTARS 254
               P + DG   + S
Sbjct: 247 GGGFPQNQDGSQRSSS 255

[Close]

BLAST of Cp4.1LG12g02850 vs. TAIR10
Match: AT3G06790.1 (AT3G06790.1 plastid developmental protein DAG, putative)

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-84
Identity = 163/226 (72.12%), Postives = 189/226 (83.63%), Query Frame = 1


Query: 1   MAARRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDR--QSRIIPNSFNFPVRFR 60
           ++ RRT  ++L+++ SSS+S S S P+ +SSR RFA PL+++   SR          R +
Sbjct: 4   ISTRRTLSTLLNKTLSSSTSYSSSFPT-LSSRSRFAMPLIEKVSSSRTSLGPCYISTRPK 63

Query: 61  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTL 120
           TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF  DPKP+EEEM+NSYVKTL
Sbjct: 64  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTL 123

Query: 121 AAVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 180
            +V+G +EEAKKKIYSV TSTYTGFGALISEELS KVK LPGVLWVLPDSYLDVPNKDYG
Sbjct: 124 TSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYG 183

Query: 181 GDLFIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQP 225
           GDL+++GKV PRPQYR+T+ Q+  R RPRPRYDRRRETMQVER +P
Sbjct: 184 GDLYVEGKVIPRPQYRFTE-QRHTRPRPRPRYDRRRETMQVERREP 226

[Close]

BLAST of Cp4.1LG12g02850 vs. TAIR10
Match: AT3G15000.1 (AT3G15000.1 cobalt ion binding)

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-49
Identity = 117/238 (49.16%), Postives = 156/238 (65.55%), Query Frame = 1


Query: 10  VLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLND 69
           + +RSF+SS+  + S  SS+ SR R   PL+   S +        V+  ++ +  S LND
Sbjct: 21  LFTRSFASSAPLAKSPASSLLSRSR---PLVAAFSSVFRGGL-VSVKGLSTQATSSSLND 80

Query: 70  PSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAK 129
           P+PNWSNRPPKETILLDGCD+EHWL+V+E P   +P+ +E+++SY+KTLA +VGSE+EA+
Sbjct: 81  PNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEAR 140

Query: 130 KKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYP 189
            KIYSVST  Y  FGAL+SE+LS+K+KEL  V WVLPDSYLDV NKDYGG+ FIDGK  P
Sbjct: 141 MKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVP 200

Query: 190 -RPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWG---QDQRDPMQQPPP 244
             P+Y     + + R   R R + R       R+   +R++       QR PM  PPP
Sbjct: 201 YDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQRPPMGGPPP 253

[Close]

BLAST of Cp4.1LG12g02850 vs. TAIR10
Match: AT1G11430.1 (AT1G11430.1 plastid developmental protein DAG, putative)

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-39
Identity = 105/244 (43.03%), Postives = 139/244 (56.97%), Query Frame = 1


Query: 14  SFSSSSSSSFSLPS--SISSRLRFAF-----------PLLDRQSRIIPNSFNFPVRFRTS 73
           SF+++SSSS  L +   +S   RF+            PLL   S          V+  T 
Sbjct: 3   SFTTTSSSSLLLKTLLPVSHLNRFSTLSGIRVGDSWTPLLRNISTAGSRRRVAIVKAATV 62

Query: 74  GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA 133
            S YS     S   ++   +ETI+L GCDY HWLIVMEFP DP PS ++M+++Y+ TLA 
Sbjct: 63  DSDYS-----SKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLAT 122

Query: 134 VVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 193
           V+GS EEAKK +Y+ ST+TYTGF   I EE S K K LPGVLWVLPDSY+DV NKDYGGD
Sbjct: 123 VLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGD 182

Query: 194 LFIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ 245
            +I+G++ P     Y  +Q++       RY+R+R+        P        +QR P Q+
Sbjct: 183 KYINGEIIPCTYPTYQPKQRNNTKYQSKRYERKRD------GPP------PPEQRKPRQE 229

[Close]

BLAST of Cp4.1LG12g02850 vs. TAIR10
Match: AT2G33430.1 (AT2G33430.1 differentiation and greening-like 1)

HSP 1 Score: 158.3 bits (399), Expect = 6.7e-39
Identity = 96/205 (46.83%), Postives = 126/205 (61.46%), Query Frame = 1


Query: 19  SSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLNDPSPNWSNRP 78
           S+ +   P  I S + +    L   +R     F+       SGS YSPLN  S N+S+RP
Sbjct: 17  SNVTLMAPPRIPSSVHYGGSRLGCSTRF----FSIRCGANRSGSTYSPLNSGS-NFSDRP 76

Query: 79  PKETI-LLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAKKKIYSVST 138
           P E   L  GCDYEHWLIVM+ P     ++++M++ Y++TLA VVGSEEEAKK+IY+VS 
Sbjct: 77  PTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSC 136

Query: 139 STYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVY---PRPQYR 198
             Y GFG  I EE S K++ LPGVL+VLPDSY+D  NKDYG +LF++G++    P  Q R
Sbjct: 137 ERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRR 196

Query: 199 YTDRQQSGRVRP----RPRYDRRRE 216
              + Q  + RP    R RY RRRE
Sbjct: 197 VEPQPQRAQDRPRYNDRTRYSRRRE 216

[Close]

BLAST of Cp4.1LG12g02850 vs. TAIR10
Match: AT2G35240.1 (AT2G35240.1 plastid developmental protein DAG, putative)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 110/230 (47.83%), Postives = 139/230 (60.43%), Query Frame = 1


Query: 3   ARRTFFSVLSRSFSSSSS--SSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPV---RF 62
           +R T   V  R FS+S++  S   LPS + SR RF+ P +      IP    F     R 
Sbjct: 6   SRSTASCVAKRFFSTSNAVASPSPLPSHLISR-RFS-PTIFHAVGYIPALTRFTTIRTRM 65

Query: 63  RTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVK 122
             SG  YSPL   S N+S+RPP E   L  GCDYEHWLIVME P      +++M++ YV+
Sbjct: 66  DRSGGSYSPLKSGS-NFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQ 125

Query: 123 TLAAVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKD 182
           TLA +VGSEEEA+KKIY+VS   Y GFG  I EE S K++ LPGVL+VLPDSY+D   KD
Sbjct: 126 TLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKD 185

Query: 183 YGGDLFIDGKVYPRP---QYRYTD-RQQSGRVRP----RPRYDRRRETMQ 219
           YG +LF++G+V PRP   Q R  +   Q G  +P    R R  RRRE M+
Sbjct: 186 YGAELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Cp4.1LG12g02850 vs. NCBI nr
Match: gi|778714733|ref|XP_004150496.2| (PREDICTED: DAG protein, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 8.3e-124
Identity = 235/272 (86.40%), Postives = 248/272 (91.18%), Query Frame = 1


Query: 2   AARRTFFSVLSRSFSSSSSSS--FSLPSS-ISSRLRFAFPLLDRQSRIIPNSFNFPVRFR 61
           A RRT F+VLSRS SSSSSSS  F LPS  ISSRLRFAFPLL+RQ +IIP SFN P+RF+
Sbjct: 5   ATRRTLFTVLSRSISSSSSSSSSFLLPSPPISSRLRFAFPLLNRQDQIIPASFNLPIRFK 64

Query: 62  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTL 121
            SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPNDPKPSEEEMVN+YVKTL
Sbjct: 65  ASGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNTYVKTL 124

Query: 122 AAVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 181
           AAVVGSEEEAKKKIYSVST+TYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG
Sbjct: 125 AAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 184

Query: 182 GDLFIDGKVYPRPQYRYTDR-QQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDP 241
           GDLFIDGKV PRPQYRY DR QQ GR RPRPRYDRRRETMQV+R QPIQRQ+WGQ+Q DP
Sbjct: 185 GDLFIDGKVIPRPQYRYHDRPQQPGRNRPRPRYDRRRETMQVDRRQPIQRQNWGQNQSDP 244

Query: 242 MQQPPPSMDGQNTARSGVGDFSTNPGELNRGN 270
           M QPPPSMDGQN  +SG+GDFSTNPGE NR N
Sbjct: 245 M-QPPPSMDGQNRVQSGIGDFSTNPGEFNRSN 275

[Close]

BLAST of Cp4.1LG12g02850 vs. NCBI nr
Match: gi|659117069|ref|XP_008458407.1| (PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 9.8e-109
Identity = 210/252 (83.33%), Postives = 223/252 (88.49%), Query Frame = 1


Query: 2   AARRTFFSVLSRSFS--SSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRT 61
           A RRT F+VLSRS S  SSSSSSF L S ISSRLRFAFPLL+RQ +IIP SFN P+RF+ 
Sbjct: 5   ATRRTLFTVLSRSLSASSSSSSSFLLSSPISSRLRFAFPLLNRQDQIIPTSFNLPIRFKA 64

Query: 62  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 121
           SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFP DPKPSEEEMVN+YVKTLA
Sbjct: 65  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFP-DPKPSEEEMVNTYVKTLA 124

Query: 122 AVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 181
           AVVGSEEEAK KIYSVST+TYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG
Sbjct: 125 AVVGSEEEAKTKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 184

Query: 182 DLFIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQ 241
           DLF+DG V PRPQYRY DRQQ  R RPRPRYDRRRET+ V R Q IQ Q+WGQ+Q DPM 
Sbjct: 185 DLFVDGMVIPRPQYRYNDRQQPSRNRPRPRYDRRRETIPVVRRQSIQGQNWGQNQSDPM- 244

Query: 242 QPPPSMDGQNTA 252
           QPPPS DGQ+ A
Sbjct: 245 QPPPSRDGQDRA 254

[Close]

BLAST of Cp4.1LG12g02850 vs. NCBI nr
Match: gi|1009163251|ref|XP_015899864.1| (PREDICTED: multiple organellar RNA editing factor 3, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 369.0 bits (946), Expect = 7.0e-99
Identity = 193/260 (74.23%), Postives = 218/260 (83.85%), Query Frame = 1


Query: 2   AARRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSG 61
           A RRT  S++SR+ S +SSSS    SS+SSR RFAF LLD++S ++P+    P R++TSG
Sbjct: 5   ATRRTLASLVSRALSHTSSSS---SSSLSSRSRFAFALLDQRSELVPSQVKIPTRYKTSG 64

Query: 62  SGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAV 121
            GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA V
Sbjct: 65  PGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAEV 124

Query: 122 VGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDL 181
           VGSEEEAKKKIYSV T+TYTGFGALISEELS KVK LPGVLWVLPDSYLDVPNKDYGGDL
Sbjct: 125 VGSEEEAKKKIYSVCTTTYTGFGALISEELSLKVKVLPGVLWVLPDSYLDVPNKDYGGDL 184

Query: 182 FIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQP 241
           FIDGKV PRPQYR+ +RQQ+ R RPRPRYDRRRETMQV+R +P+Q ++  +D R P+QQP
Sbjct: 185 FIDGKVIPRPQYRFNERQQTSRNRPRPRYDRRRETMQVQRREPMQSRT--EDFRQPVQQP 244

Query: 242 PPSMDGQNTARSGVGDFSTN 262
             S   Q+ A+ G  DFS N
Sbjct: 245 TQSY-SQSAAQGGPEDFSAN 258

[Close]

BLAST of Cp4.1LG12g02850 vs. NCBI nr
Match: gi|225431796|ref|XP_002272388.1| (PREDICTED: uncharacterized protein At3g15000, mitochondrial [Vitis vinifera])

HSP 1 Score: 360.1 bits (923), Expect = 3.3e-96
Identity = 193/259 (74.52%), Postives = 213/259 (82.24%), Query Frame = 1


Query: 4   RRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSR-IIPNSFNFPVRFRTSGS 63
           RRT    LSR+ S S SSS  L SS   R RFAF L+D+ S  ++ NS   P R +TSGS
Sbjct: 7   RRTLARFLSRTLSQSFSSSSLLASS---RSRFAFALIDKHSPPLVSNSARVPTRLKTSGS 66

Query: 64  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVV 123
           GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND KPSE+EM+ +YVKTLAAVV
Sbjct: 67  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDSKPSEDEMIAAYVKTLAAVV 126

Query: 124 GSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 183
           GSEEEAKKKIYSV T+TYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF
Sbjct: 127 GSEEEAKKKIYSVCTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 186

Query: 184 IDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPP 243
           IDGKV  RPQYRY +RQ + R RPRPRYDRRRETMQVER +P+QR +W QD+R+PM Q P
Sbjct: 187 IDGKVIHRPQYRYNERQPT-RSRPRPRYDRRRETMQVERREPMQRDNWAQDRREPMHQ-P 246

Query: 244 PSMDGQNTARSGVGDFSTN 262
            SM+ QN+ + G  D S N
Sbjct: 247 TSMNDQNSPQGGGRDPSLN 260

[Close]

BLAST of Cp4.1LG12g02850 vs. NCBI nr
Match: gi|388493544|gb|AFK34838.1| (unknown [Medicago truncatula])

HSP 1 Score: 353.6 bits (906), Expect = 3.1e-94
Identity = 185/252 (73.41%), Postives = 209/252 (82.94%), Query Frame = 1


Query: 3   ARRTFFSVLSRSFSSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGS 62
           ARRT  S+L+R+ SSSSSS  +      +R RFAF L     + +P   +FPVRF++SGS
Sbjct: 6   ARRTLASILTRALSSSSSSGIAS----LNRTRFAFALSSASRQTLPIPHSFPVRFKSSGS 65

Query: 63  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVV 122
           GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLI+MEFP++PKPSE+EMVNSYVKTLA V+
Sbjct: 66  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVL 125

Query: 123 GSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 182
           GSEEEAKKKIYSVSTSTY GFGAL+SEELSYK+KELPGVLWVLPDSYLDVPNKDYGGDLF
Sbjct: 126 GSEEEAKKKIYSVSTSTYIGFGALVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGDLF 185

Query: 183 IDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPP 242
           +DGKV PRPQYRYT+R  S R RPRPR+DRRRETMQVER  P QRQ+W Q Q + M QP 
Sbjct: 186 VDGKVIPRPQYRYTERAPS-RNRPRPRHDRRRETMQVERRDPNQRQNWNQVQGEHM-QPS 245

Query: 243 PSMDGQNTARSG 255
             M+ QN+A  G
Sbjct: 246 NPMNSQNSASGG 251

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g02850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MORF3_ARATH	6.4e-84	72.57	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
MORF8_ARATH	3.3e-48	49.16	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
DAG_ANTMA	1.8e-38	43.84	DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1	[more]
MORF9_ARATH	4.1e-38	43.03	Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana ...	[more]
MORF2_ARATH	1.2e-37	46.83	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Cp4.1LG12g02850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCH1_CUCSA	5.8e-124	86.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318670 PE=4 SV=1	[more]
A5AMS0_VITVI	2.3e-96	74.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01880 PE=4 SV=...	[more]
I3S3J6_MEDTR	2.1e-94	73.41	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
A0A072UR55_MEDTR	8.1e-94	73.02	Plastid developmental protein DAG OS=Medicago truncatula GN=MTR_4g120340 PE=4 SV...	[more]
A0A103XJ77_CYNCS	1.8e-93	72.66	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006272 PE=4 ...	[more]

BLAST of Cp4.1LG12g02850 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06790.1	1.4e-84	72.12	plastid developmental protein DAG, putative	[more]
AT3G15000.1	1.9e-49	49.16	cobalt ion binding	[more]
AT1G11430.1	2.3e-39	43.03	plastid developmental protein DAG, putative	[more]
AT2G33430.1	6.7e-39	46.83	differentiation and greening-like 1	[more]
AT2G35240.1	1.5e-38	47.83	plastid developmental protein DAG, putative	[more]

BLAST of Cp4.1LG12g02850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778714733\|ref\|XP_004150496.2\|	8.3e-124	86.40	PREDICTED: DAG protein, chloroplastic isoform X1 [Cucumis sativus]	[more]
gi\|659117069\|ref\|XP_008458407.1\|	9.8e-109	83.33	PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Cucumis melo]	[more]
gi\|1009163251\|ref\|XP_015899864.1\|	7.0e-99	74.23	PREDICTED: multiple organellar RNA editing factor 3, mitochondrial [Ziziphus juj...	[more]
gi\|225431796\|ref\|XP_002272388.1\|	3.3e-96	74.52	PREDICTED: uncharacterized protein At3g15000, mitochondrial [Vitis vinifera]	[more]
gi\|388493544\|gb\|AFK34838.1\|	3.1e-94	73.41	unknown [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900864	mitochondrial RNA modification
biological_process	GO:0008150	biological_process
biological_process	GO:0016554	cytidine to uridine editing
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g02850.1	Cp4.1LG12g02850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31346	FAMILY NOT NAMED	coord: 1..256 score: 1.2E
None	No IPR available	PANTHER	PTHR31346:SF1	MULTIPLE ORGANELLAR RNA EDITING FACTOR 3	coord: 1..256 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g02850	Cucsa.069250	Cucumber (Gy14) v1	cgycpeB0107
Cp4.1LG12g02850	CmaCh17G003440	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g02850	CmaCh08G012410	Cucurbita maxima (Rimu)	cmacpeB895
Cp4.1LG12g02850	CmoCh17G003310	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g02850	Cla009285	Watermelon (97103) v1	cpewmB161
Cp4.1LG12g02850	Csa6G318660	Cucumber (Chinese Long) v2	cpecuB151
Cp4.1LG12g02850	MELO3C021308	Melon (DHL92) v3.5.1	cpemeB112
Cp4.1LG12g02850	ClCG06G004940	Watermelon (Charleston Gray)	cpewcgB144
Cp4.1LG12g02850	CSPI06G17430	Wild cucumber (PI 183967)	cpecpiB153
Cp4.1LG12g02850	Lsi09G014530	Bottle gourd (USVL1VR-Ls)	cpelsiB101
Cp4.1LG12g02850	MELO3C021308.2	Melon (DHL92) v3.6.1	cpemedB138
Cp4.1LG12g02850	CsaV3_6G023800	Cucumber (Chinese Long) v3	cpecucB0175
Cp4.1LG12g02850	Bhi12G001801	Wax gourd	cpewgoB0181
Cp4.1LG12g02850	CsGy6G016880	Cucumber (Gy14) v2	cgybcpeB731
Cp4.1LG12g02850	Carg05519	Silver-seed gourd	carcpeB0099

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g02850	Silver-seed gourd	carcpeB0393
Cp4.1LG12g02850	Silver-seed gourd	carcpeB0984
Cp4.1LG12g02850	Cucumber (Chinese Long) v3	cpecucB0149
Cp4.1LG12g02850	Cucumber (Chinese Long) v3	cpecucB0154
Cp4.1LG12g02850	Wax gourd	cpewgoB0188
Cp4.1LG12g02850	Cucurbita pepo (Zucchini)	cpecpeB109
Cp4.1LG12g02850	Cucurbita pepo (Zucchini)	cpecpeB158
Cp4.1LG12g02850	Cucurbita pepo (Zucchini)	cpecpeB184
Cp4.1LG12g02850	Cucurbita pepo (Zucchini)	cpecpeB194
Cp4.1LG12g02850	Cucumber (Gy14) v1	cgycpeB0671
Cp4.1LG12g02850	Cucurbita moschata (Rifu)	cmocpeB225
Cp4.1LG12g02850	Cucurbita moschata (Rifu)	cmocpeB833
Cp4.1LG12g02850	Wild cucumber (PI 183967)	cpecpiB133
Cp4.1LG12g02850	Cucumber (Chinese Long) v2	cpecuB132
Cp4.1LG12g02850	Bottle gourd (USVL1VR-Ls)	cpelsiB118
Cp4.1LG12g02850	Watermelon (Charleston Gray)	cpewcgB139
Cp4.1LG12g02850	Watermelon (97103) v1	cpewmB152
Cp4.1LG12g02850	Melon (DHL92) v3.5.1	cpemeB140
Cp4.1LG12g02850	Cucumber (Gy14) v2	cgybcpeB179
Cp4.1LG12g02850	Cucumber (Gy14) v2	cgybcpeB303
Cp4.1LG12g02850	Melon (DHL92) v3.6.1	cpemedB169
Cp4.1LG12g02850	Melon (DHL92) v3.6.1	cpemedB170