Carg05519 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05519
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	multiple organellar RNA editing factor 3, mitochondrial-like
Location	Cucurbita_argyrosperma_scaffold_046 : 905660 .. 908430 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTATTCCGCCACCATCAAGCTTTCAACAATGGCCGCTCGGCGAACGTTTTTCACTGTCCTTAGCCGAAGCTTCTCCTCTTCTTCTTCTTCCTTCTCTCTTCCGTCTTCTATTTCTTCTCGCCTGAGATTTGCTTTTCCTCTGCTCGACAGACAGAGTCGAATAATCCCTAATTCATTCAATTTTCCAGTTCGATTCAGGACTTCGGGGTCCGGATACTCTCCACTCAATGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGTGATTACGAGCATTGGCTGATCGTGATGGAGTTTCCAAATGATCCGAAACCATCGGAGGAGGAGATGGTGAACTCTTATGTCAAAACTCTAGCCGCTGTTGTGGGAAGGTATCGGAATGAAACAACTTATTATACACGGATTACTTATTGGTGTGTATTTTGCTTGGATTATCTTGTTTGTTGATTTTAGGGTTTTCGTTTTCTTCTGATTCTCAGTGAAGAAGAGGCGAAGAAGAAAATTTACTCTGTCAGTACAACTACGTATACTGGCTTTGGTGCCTTGATTTCGGAAGAGCTTTCTTACAAAGTGAAAGGTAATAGTTTCTGTGCGTTATAATTAGATTAAGGAGCCTTGGGAATTTGATTTGTTCTTCTTTTATTTGTTTGGATTTTGTCGATTATTTGGATTACAATTGAAGATTGAAAATTGTAGTTTTGAGCTCAAGCGCATCATATGTTTGATGAAAGTTCCCTCATGAATTTGATTAGTTAAAGCTCCCATTAATAATCATAGCTTGTTTTTTTTTGTCTCATTTTCTTGATTATGGTACTCATTTGAATTCTTATCAAAATTTGGTTTGTATGTTGAAACCAAATAGGTGGAACTAGAGTTTATAAGCTTAATTTTCAAGAACCAAAAACCCAAAAATCAATTAGTTATCAAACTACGCTTAAGAACTTTCCCATGAAGTTTGCTGTAGAATTCACTCGGGTATTGGTTTGTATTATTTTGTGACATTTTTTCGAAGAACTTTTCCCTTTCTATTTTAAAGTTGTGCTTTAGTGTAACAACCCAAGCCTAGTACTAGCAGATATTGTCTTCTTTGGGCTTTCCCTCAAGGCTTTAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCATACCCTTATAAATGGTGAACATTTGTTCTCCCCCCAACCAATGTACCCCTAACCAATGTGGGACATCACAATCCACCCCCCTTTGAGACCCAGCGTCCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCGCCCCCAAATCCACCCTCCTTTGGGGCCAAGTGTCCTTGCTAGCACACCGCCTTGTGTCTACCCCCTTTGGGGAACAACGAGAAGACTGACACATCGTCCGGTGTCTGGCTCTGATACCATTCGGGCTTCTCCTCACCCTTCTGGCTCTGTAACGACCCAGGCCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCGTTTCGGGCTTCCCCTCAAGGCTTTAAAATGCGTATGCTAAGGGATAGGTTTCCACACCCTTATAAATAGCGGTTTGTTCTCCTCCCCAACCAACGTGGGACATCACATTTAGAATCAACTCGATTATACTCCTCCCCAACCAATGTAGGACCTCACATTTAGAATCAACTCGATTATAGTTTTATCATTCTTGTGTTACCACTGTGAAGGTTTGACACTGTTTTGTGATAATTTCTATTTGGTTTTTGTAAAGAACAATATTGGGTGACTTGAGCTCTTTGTTCCCATGAAACAGAATTGCCAGGAGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTATGGAGGTGATTACTCTTCTAAACTCTATGGAATTGTTATAAATTGAAACCAGTTGATTTCTCAAGTTAAATGCTCATTGCTTGTACGAGTTTTTCGTGTTGTTTTCAGGCGATTTGTTCATTGATGGAAAGGTCTACCCAAGACCGCAGTTTAGGTACACCGAGAGGCAACAATCTGGTAGAGTTAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGGAGCCAACCGATTCAGAGACAAAGCTGGGGTCAAGATCAGAGAGATCCAATGCAGCAACCACCACCATCCATGGACGGTCAAAATACAGCTCGAAGTGGTGTCGGAGATTTCTCGACAAACCCAGGCGAGTTTAATCGGGGTAATCACTGATTGATGAATGCTTGAAAATTTGAATATTTATCGGTTCCTTAATGCATGAAGTTTAGGCATCATATGTCTAGATTGGTCTGGATTTTTGTCACTCCTCTACCTATCATATGAGATTTCTACGAGTTCTTAATACTCTTAGATCAAGTCTAGACATCATAATATCTAGCATCTAAATGCATTGAAATGTGAATATTTAGTATGTTGACTAGAATCCTTGATATTGGGAATGATTGAACTACATTGATCTTTCCTTCTTCTTGGTTGTTCTCTCATTGTTTACCAGCTGATCTGATGAAATTTCACATGATTTTGTTATTTATTTATTTTGATCTTCATTTGGTTTTGCCTTCTTATAACTTTTGTTTTTCCTATTTATTATTTTATGAATGAGTAGAGGAGATTCAAACTTATGTGATGGGAAGCTCTTGTGCCTGAGTTGTTACGGAGGTCGGGTTATATATCCTTAGTTTTAAATGTTTGTAGTGAGTAGTTTTGTGCCAAAATCTGAATTATTGAATAATTCA

mRNA sequence

TGTTATTCCGCCACCATCAAGCTTTCAACAATGGCCGCTCGGCGAACGTTTTTCACTGTCCTTAGCCGAAGCTTCTCCTCTTCTTCTTCTTCCTTCTCTCTTCCGTCTTCTATTTCTTCTCGCCTGAGATTTGCTTTTCCTCTGCTCGACAGACAGAGTCGAATAATCCCTAATTCATTCAATTTTCCAGTTCGATTCAGGACTTCGGGGTCCGGATACTCTCCACTCAATGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGTGATTACGAGCATTGGCTGATCGTGATGGAGTTTCCAAATGATCCGAAACCATCGGAGGAGGAGATGGTGAACTCTTATGTCAAAACTCTAGCCGCTGTTGTGGGAAGTGAAGAAGAGGCGAAGAAGAAAATTTACTCTGTCAGTACAACTACGTATACTGGCTTTGGTGCCTTGATTTCGGAAGAGCTTTCTTACAAAGTGAAAGAATTGCCAGGAGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTATGGAGGCGATTTGTTCATTGATGGAAAGGTCTACCCAAGACCGCAGTTTAGGTACACCGAGAGGCAACAATCTGGTAGAGTTAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGGAGCCAACCGATTCAGAGACAAAGCTGGGGTCAAGATCAGAGAGATCCAATGCAGCAACCACCACCATCCATGGACGGTCAAAATACAGCTCGAAGTGGTGTCGGAGATTTCTCGACAAACCCAGGCGAGTTTAATCGGGGTAATCACTGATTGATGAATGCTTGAAAATTTGAATATTTATCGGTTCCTTAATGCATGAAGTTTAGGCATCATATGTCTAGATTGGTCTGGATTTTTGTCACTCCTCTACCTATCATATGAGATTTCTACGAGTTCTTAATACTCTTAGATCAAGTCTAGACATCATAATATCTAGCATCTAAATGCATTGAAATGTGAATATTTAGTATGTTGACTAGAATCCTTGATATTGGGAATGATTGAACTACATTGATCTTTCCTTCTTCTTGGTTGTTCTCTCATTGTTTACCAGCTGATCTGATGAAATTTCACATGATTTTGTTATTTATTTATTTTGATCTTCATTTGGTTTTGCCTTCTTATAACTTTTGTTTTTCCTATTTATTATTTTATGAATGAGTAGAGGAGATTCAAACTTATGTGATGGGAAGCTCTTGTGCCTGAGTTGTTACGGAGGTCGGGTTATATATCCTTAGTTTTAAATGTTTGTAGTGAGTAGTTTTGTGCCAAAATCTGAATTATTGAATAATTCA

Coding sequence (CDS)

ATGGCCGCTCGGCGAACGTTTTTCACTGTCCTTAGCCGAAGCTTCTCCTCTTCTTCTTCTTCCTTCTCTCTTCCGTCTTCTATTTCTTCTCGCCTGAGATTTGCTTTTCCTCTGCTCGACAGACAGAGTCGAATAATCCCTAATTCATTCAATTTTCCAGTTCGATTCAGGACTTCGGGGTCCGGATACTCTCCACTCAATGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGTGATTACGAGCATTGGCTGATCGTGATGGAGTTTCCAAATGATCCGAAACCATCGGAGGAGGAGATGGTGAACTCTTATGTCAAAACTCTAGCCGCTGTTGTGGGAAGTGAAGAAGAGGCGAAGAAGAAAATTTACTCTGTCAGTACAACTACGTATACTGGCTTTGGTGCCTTGATTTCGGAAGAGCTTTCTTACAAAGTGAAAGAATTGCCAGGAGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTATGGAGGCGATTTGTTCATTGATGGAAAGGTCTACCCAAGACCGCAGTTTAGGTACACCGAGAGGCAACAATCTGGTAGAGTTAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGGAGCCAACCGATTCAGAGACAAAGCTGGGGTCAAGATCAGAGAGATCCAATGCAGCAACCACCACCATCCATGGACGGTCAAAATACAGCTCGAAGTGGTGTCGGAGATTTCTCGACAAACCCAGGCGAGTTTAATCGGGGTAATCACTGA

Protein sequence

MAARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPPPSMDGQNTARSGVGDFSTNPGEFNRGNH

Homology

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BLAST of Carg05519 vs. NCBI nr
Match: XP_022959433.1 (multiple organellar RNA editing factor 3, mitochondrial [Cucurbita moschata])

HSP 1 Score: 514.6 bits (1324), Expect = 2.0e-142
Identity = 261/270 (96.67%), Postives = 261/270 (96.67%), Query Frame = 0


Query: 1   MAARRTFFTVLSRSFS-SSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTS 60
           MAARRTFFTVLSRSFS         PSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTS
Sbjct: 1   MAARRTFFTVLSRSFSXXXXXXXXXPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTS 60

Query: 61  GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA 120
           GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA
Sbjct: 61  GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA 120

Query: 121 VVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 180
           VVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD
Sbjct: 121 VVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 180

Query: 181 LFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ 240
           LFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ
Sbjct: 181 LFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ 240

Query: 241 PPPSMDGQNTARSGVGDFSTNPGEFNRGNH 270
           PPPSMDGQNTARSGVGDFSTNPGEFNRGNH
Sbjct: 241 PPPSMDGQNTARSGVGDFSTNPGEFNRGNH 270

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BLAST of Carg05519 vs. NCBI nr
Match: XP_023006413.1 (multiple organellar RNA editing factor 3, mitochondrial [Cucurbita maxima])

HSP 1 Score: 500.0 bits (1286), Expect = 5.1e-138
Identity = 255/269 (94.80%), Postives = 258/269 (95.91%), Query Frame = 0


Query: 1   MAARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSG 60
           MAARR FFTVLSRSF SSSSS S PSSISSRLR AFPLLDRQS+IIPNSFNFPVRFRTSG
Sbjct: 1   MAARRAFFTVLSRSF-SSSSSLSHPSSISSRLRLAFPLLDRQSQIIPNSFNFPVRFRTSG 60

Query: 61  SGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAV 120
           SGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAV
Sbjct: 61  SGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAV 120

Query: 121 VGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDL 180
           VGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDL
Sbjct: 121 VGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDL 180

Query: 181 FIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQP 240
           FIDGKVYPRPQ+RYTERQQSGRV      DRRRETMQVERSQPIQRQSWGQDQRDP+QQP
Sbjct: 181 FIDGKVYPRPQYRYTERQQSGRVXXXXXXDRRRETMQVERSQPIQRQSWGQDQRDPVQQP 240

Query: 241 PPSMDGQNTARSGVGDFSTNPGEFNRGNH 270
           PPSMDGQNTARSGVGDFSTNPGEFNRGNH
Sbjct: 241 PPSMDGQNTARSGVGDFSTNPGEFNRGNH 268

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BLAST of Carg05519 vs. NCBI nr
Match: XP_023548315.1 (multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.1 bits (1237), Expect = 2.5e-132
Identity = 245/270 (90.74%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 1   MAARRTFFTVLSR-SFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTS 60
           MAARRTFF+VLSR                 SRLRFAFPLLDRQSRIIPNSFNFPVRFRTS
Sbjct: 88  MAARRTFFSVLSRXXXXXXXXXXXXXXXXXSRLRFAFPLLDRQSRIIPNSFNFPVRFRTS 147

Query: 61  GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA 120
           GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA
Sbjct: 148 GSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAA 207

Query: 121 VVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 180
           VVGSEEEAKKKIYSVST+TYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD
Sbjct: 208 VVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 267

Query: 181 LFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ 240
           LFIDGKVYPRPQ+RYT+RQQSGRVR   RYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ
Sbjct: 268 LFIDGKVYPRPQYRYTDRQQSGRVRXXXRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQ 327

Query: 241 PPPSMDGQNTARSGVGDFSTNPGEFNRGNH 270
           PPPSMDGQNTARSGVGDFSTNPGE NRGNH
Sbjct: 328 PPPSMDGQNTARSGVGDFSTNPGELNRGNH 357

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BLAST of Carg05519 vs. NCBI nr
Match: XP_022138380.1 (multiple organellar RNA editing factor 3, mitochondrial-like [Momordica charantia])

HSP 1 Score: 443.0 bits (1138), Expect = 7.4e-121
Identity = 226/267 (84.64%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 2   AARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGS 61
           A RRT FTVL+RS  S SSSFS  S +SSRLRFAF L++R  +I PN+FN P+RF+TSGS
Sbjct: 5   ATRRTLFTVLTRS-RSFSSSFSFSSPVSSRLRFAFALINRLGQIAPNAFNLPIRFKTSGS 64

Query: 62  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVV 121
           GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPNDPKPSEEEMVNSY+KTLAAVV
Sbjct: 65  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNSYIKTLAAVV 124

Query: 122 GSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 181
           GSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF
Sbjct: 125 GSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 184

Query: 182 IDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPP 241
           IDGKV PRPQ+RY ERQQ+GR R     DRRRETMQVER QPIQRQSWGQDQRDP+ QPP
Sbjct: 185 IDGKVIPRPQYRYNERQQTGRNRXXXXXDRRRETMQVERRQPIQRQSWGQDQRDPV-QPP 244

Query: 242 PSMDGQNTARSGVGDFSTNPGEFNRGN 269
           PSMDGQNTARSGVG FSTN G+FN+ N
Sbjct: 245 PSMDGQNTARSGVGGFSTNLGDFNKSN 269

[Close]

BLAST of Carg05519 vs. NCBI nr
Match: XP_022152262.1 (multiple organellar RNA editing factor 3, mitochondrial-like [Momordica charantia])

HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115
Identity = 221/267 (82.77%), Postives = 236/267 (88.39%), Query Frame = 0


Query: 2   AARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGS 61
           A+RRT FTVL+R+  S SSSFS  S +SSR RFAF L++RQ  I PN+FN  VRF+TSGS
Sbjct: 5   ASRRTLFTVLTRT-RSLSSSFSSSSPVSSRQRFAFALMNRQDPIAPNAFNLLVRFKTSGS 64

Query: 62  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVV 121
           GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPNDPKPSEEEMVNSYVKTLAAVV
Sbjct: 65  GYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNSYVKTLAAVV 124

Query: 122 GSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 181
           GSEEEAKKKIYSV TTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF
Sbjct: 125 GSEEEAKKKIYSVCTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLF 184

Query: 182 IDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPP 241
           IDGKV PRPQ+RY ERQQ+GR R     DRRRETMQVER QPIQRQSWGQDQRDP+  P 
Sbjct: 185 IDGKVIPRPQYRYNERQQTGRNRXXXXXDRRRETMQVERRQPIQRQSWGQDQRDPV-HPL 244

Query: 242 PSMDGQNTARSGVGDFSTNPGEFNRGN 269
           PS+DGQNTA+SGV  FSTN G+FNR N
Sbjct: 245 PSIDGQNTAQSGVRGFSTNLGDFNRSN 269

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BLAST of Carg05519 vs. TAIR10
Match: AT3G06790.1 (plastid developmental protein DAG, putative)

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-79
Identity = 155/225 (68.89%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 1   MAARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDR--QSRIIPNSFNFPVRFRT 60
           ++ RRT  T+L+++ SSS+S  S   ++SSR RFA PL+++   SR          R +T
Sbjct: 4   ISTRRTLSTLLNKTLSSSTSYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYISTRPKT 63

Query: 61  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 120
           SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF  DPKP+EEEM+NSYVKTL 
Sbjct: 64  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLT 123

Query: 121 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 180
           +V+G +EEAKKKIYSV T+TYTGFGALISEELS KVK LPGVLWVLPDSYLDVPNKDYGG
Sbjct: 124 SVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGG 183

Query: 181 DLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQP 224
           DL+++GKV PRPQ+R+TE Q+  R       DRRRETMQVER +P
Sbjct: 184 DLYVEGKVIPRPQYRFTE-QRHTRXXXXXXXDRRRETMQVERREP 226

[Close]

BLAST of Carg05519 vs. TAIR10
Match: AT3G15000.1 (cobalt ion binding)

HSP 1 Score: 191.8 bits (486), Expect = 5.4e-49
Identity = 102/180 (56.67%), Postives = 132/180 (73.33%), Query Frame = 0


Query: 10  VLSRSFSSSSSSFSLP-SSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLND 69
           + +RSF+SS+     P SS+ SR R   PL+   S +        V+  ++ +  S LND
Sbjct: 21  LFTRSFASSAPLAKSPASSLLSRSR---PLVAAFSSVFRGGL-VSVKGLSTQATSSSLND 80

Query: 70  PSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAK 129
           P+PNWSNRPPKETILLDGCD+EHWL+V+E P   +P+ +E+++SY+KTLA +VGSE+EA+
Sbjct: 81  PNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEAR 140

Query: 130 KKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYP 189
            KIYSVST  Y  FGAL+SE+LS+K+KEL  V WVLPDSYLDV NKDYGG+ FIDGK  P
Sbjct: 141 MKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVP 195

[Close]

BLAST of Carg05519 vs. TAIR10
Match: AT1G11430.1 (plastid developmental protein DAG, putative)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 54  VRFRTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSY 113
           V+  T  S YS     S   ++   +ETI+L GCDY HWLIVMEFP DP PS ++M+++Y
Sbjct: 57  VKAATVDSDYS-----SKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTY 116

Query: 114 VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN 173
           + TLA V+GS EEAKK +Y+ STTTYTGF   I EE S K K LPGVLWVLPDSY+DV N
Sbjct: 117 LNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKN 176

Query: 174 KDYGGDLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRE 215
           KDYGGD +I+G++ P     Y  +Q++       RY+R+R+
Sbjct: 177 KDYGGDKYINGEIIPCTYPTYQPKQRNNTKYQSKRYERKRD 212

[Close]

BLAST of Carg05519 vs. TAIR10
Match: AT2G35240.1 (plastid developmental protein DAG, putative)

HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39
Identity = 111/230 (48.26%), Postives = 139/230 (60.43%), Query Frame = 0


Query: 3   ARRTFFTVLSRSFSSSSSSFS---LPSSISSRLRFAFPLLDRQSRIIPNSFNFP---VRF 62
           +R T   V  R FS+S++  S   LPS + SR RF+ P +      IP    F     R 
Sbjct: 6   SRSTASCVAKRFFSTSNAVASPSPLPSHLISR-RFS-PTIFHAVGYIPALTRFTTIRTRM 65

Query: 63  RTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVK 122
             SG  YSPL   S N+S+RPP E   L  GCDYEHWLIVME P      +++M++ YV+
Sbjct: 66  DRSGGSYSPLKSGS-NFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQ 125

Query: 123 TLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKD 182
           TLA +VGSEEEA+KKIY+VS   Y GFG  I EE S K++ LPGVL+VLPDSY+D   KD
Sbjct: 126 TLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKD 185

Query: 183 YGGDLFIDGKVYPRP---QFRYTE-RQQSGRVRP----RPRYDRRRETMQ 218
           YG +LF++G+V PRP   Q R  E   Q G  +P    R R  RRRE M+
Sbjct: 186 YGAELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Carg05519 vs. TAIR10
Match: AT1G32580.1 (plastid developmental protein DAG, putative)

HSP 1 Score: 155.6 bits (392), Expect = 4.3e-38
Identity = 99/227 (43.61%), Postives = 133/227 (58.59%), Query Frame = 0


Query: 3   ARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFP---VRFRTS 62
           AR T   +  R  S+S ++   PS I SR   + P+       I +   F     R   S
Sbjct: 6   ARSTASRITKRLISTSGATTPSPSYILSRR--STPVFSHAVGFISSLNRFTTIRTRMDRS 65

Query: 63  GSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 122
           G  YSPL   S N+S+R P E   L  GCDYEHWLIVM+ P     ++++M++ YV+TLA
Sbjct: 66  GGSYSPLKSGS-NFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLA 125

Query: 123 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 182
            ++GSEEEAKKKIY+VS   Y GFG  I EE S K++ LPGVL++LPDSY+D  NKDYG 
Sbjct: 126 KIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGA 185

Query: 183 DLFIDGKVYPRPQFRY-------TER-QQSGRVRPRPRYDRRRETMQ 218
           +LF++G++  RP  R        T+R     +   + RY RRRE M+
Sbjct: 186 ELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENMR 229

[Close]

BLAST of Carg05519 vs. Swiss-Prot
Match: sp|Q84JZ6|MORF3_ARATH (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.3e-79
Identity = 156/225 (69.33%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 1   MAARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDR--QSRIIPNSFNFPVRFRT 60
           ++ RRT  T+L+++ SSS+S  S   ++SSR RFA PL+++   SR          R +T
Sbjct: 4   ISTRRTLSTLLNKTLSSSTSYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYISTRPKT 63

Query: 61  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 120
           SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF  DPKP+EEEM+NSYVKTL 
Sbjct: 64  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLT 123

Query: 121 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 180
           +V+G EEEAKKKIYSV T+TYTGFGALISEELS KVK LPGVLWVLPDSYLDVPNKDYGG
Sbjct: 124 SVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGG 183

Query: 181 DLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQP 224
           DL+++GKV PRPQ+R+TE Q+  R       DRRRETMQVER +P
Sbjct: 184 DLYVEGKVIPRPQYRFTE-QRHTRXXXXXXXDRRRETMQVERREP 226

[Close]

BLAST of Carg05519 vs. Swiss-Prot
Match: sp|Q9LKA5|MORF8_ARATH (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.8e-48
Identity = 102/180 (56.67%), Postives = 132/180 (73.33%), Query Frame = 0


Query: 10  VLSRSFSSSSSSFSLP-SSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSGYSPLND 69
           + +RSF+SS+     P SS+ SR R   PL+   S +        V+  ++ +  S LND
Sbjct: 21  LFTRSFASSAPLAKSPASSLLSRSR---PLVAAFSSVFRGGL-VSVKGLSTQATSSSLND 80

Query: 70  PSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAK 129
           P+PNWSNRPPKETILLDGCD+EHWL+V+E P   +P+ +E+++SY+KTLA +VGSE+EA+
Sbjct: 81  PNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEAR 140

Query: 130 KKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYP 189
            KIYSVST  Y  FGAL+SE+LS+K+KEL  V WVLPDSYLDV NKDYGG+ FIDGK  P
Sbjct: 141 MKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVP 195

[Close]

BLAST of Carg05519 vs. Swiss-Prot
Match: sp|Q9LPZ1|MORF9_ARATH (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.0e-41
Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 54  VRFRTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSY 113
           V+  T  S YS     S   ++   +ETI+L GCDY HWLIVMEFP DP PS ++M+++Y
Sbjct: 57  VKAATVDSDYS-----SKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTY 116

Query: 114 VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN 173
           + TLA V+GS EEAKK +Y+ STTTYTGF   I EE S K K LPGVLWVLPDSY+DV N
Sbjct: 117 LNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKN 176

Query: 174 KDYGGDLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRE 215
           KDYGGD +I+G++ P     Y  +Q++       RY+R+R+
Sbjct: 177 KDYGGDKYINGEIIPCTYPTYQPKQRNNTKYQSKRYERKRD 212

[Close]

BLAST of Carg05519 vs. Swiss-Prot
Match: sp|Q38732|DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.3e-39
Identity = 78/145 (53.79%), Postives = 101/145 (69.66%), Query Frame = 0


Query: 81  TILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTTTYT 140
           TI+L GCDY HWLIVMEFP DP P+ E+M+++Y+ TLA V+GS EEAKK +Y+ STTTYT
Sbjct: 78  TIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 137

Query: 141 GFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYPRPQFRYTERQQS 200
           GF   ++EE S K K LPGVLWVLPDSY+DV NKDYGGD +++G++ P     Y  +Q  
Sbjct: 138 GFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSR 197

Query: 201 GRVRPRPRYDRRRETMQVERSQPIQ 226
                   Y R+R+    E+ +P Q
Sbjct: 198 SSKYKSKAYVRQRDGPPAEQRRPKQ 222

[Close]

BLAST of Carg05519 vs. Swiss-Prot
Match: sp|O82169|MORF6_ARATH (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.0e-38
Identity = 111/230 (48.26%), Postives = 139/230 (60.43%), Query Frame = 0


Query: 3   ARRTFFTVLSRSFSSSSSSFS---LPSSISSRLRFAFPLLDRQSRIIPNSFNFP---VRF 62
           +R T   V  R FS+S++  S   LPS + SR RF+ P +      IP    F     R 
Sbjct: 6   SRSTASCVAKRFFSTSNAVASPSPLPSHLISR-RFS-PTIFHAVGYIPALTRFTTIRTRM 65

Query: 63  RTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVK 122
             SG  YSPL   S N+S+RPP E   L  GCDYEHWLIVME P      +++M++ YV+
Sbjct: 66  DRSGGSYSPLKSGS-NFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQ 125

Query: 123 TLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKD 182
           TLA +VGSEEEA+KKIY+VS   Y GFG  I EE S K++ LPGVL+VLPDSY+D   KD
Sbjct: 126 TLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKD 185

Query: 183 YGGDLFIDGKVYPRP---QFRYTE-RQQSGRVRP----RPRYDRRRETMQ 218
           YG +LF++G+V PRP   Q R  E   Q G  +P    R R  RRRE M+
Sbjct: 186 YGAELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Carg05519 vs. TrEMBL
Match: tr|A0A0A0KCH1|A0A0A0KCH1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318670 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.2e-111
Identity = 215/272 (79.04%), Postives = 228/272 (83.82%), Query Frame = 0


Query: 2   AARRTFFTVLSRSF----SSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFR 61
           A RRT FTVLSRS                 ISSRLRFAFPLL+RQ +IIP SFN P+RF+
Sbjct: 5   ATRRTLFTVLSRSIXXXXXXXXXXXXXSPPISSRLRFAFPLLNRQDQIIPASFNLPIRFK 64

Query: 62  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTL 121
            SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPNDPKPSEEEMVN+YVKTL
Sbjct: 65  ASGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNTYVKTL 124

Query: 122 AAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 181
           AAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG
Sbjct: 125 AAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 184

Query: 182 GDLFIDGKVYPRPQFRYTER-QQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDP 241
           GDLFIDGKV PRPQ+RY +R QQ GR R          TMQV+R QPIQRQ+WGQ+Q DP
Sbjct: 185 GDLFIDGKVIPRPQYRYHDRPQQPGRNRXXXXXXXXXXTMQVDRRQPIQRQNWGQNQSDP 244

Query: 242 MQQPPPSMDGQNTARSGVGDFSTNPGEFNRGN 269
           M QPPPSMDGQN  +SG+GDFSTNPGEFNR N
Sbjct: 245 M-QPPPSMDGQNRVQSGIGDFSTNPGEFNRSN 275

[Close]

BLAST of Carg05519 vs. TrEMBL
Match: tr|A0A1S3C8E0|A0A1S3C8E0_CUCME (multiple organellar RNA editing factor 3, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103497830 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.9e-104
Identity = 202/252 (80.16%), Postives = 215/252 (85.32%), Query Frame = 0


Query: 2   AARRTFFTVLSRSFS---SSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRT 61
           A RRT FTVLSRS S            S ISSRLRFAFPLL+RQ +IIP SFN P+RF+ 
Sbjct: 5   ATRRTLFTVLSRSLSXXXXXXXXXXXSSPISSRLRFAFPLLNRQDQIIPTSFNLPIRFKA 64

Query: 62  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 121
           SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFP DPKPSEEEMVN+YVKTLA
Sbjct: 65  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFP-DPKPSEEEMVNTYVKTLA 124

Query: 122 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 181
           AVVGSEEEAK KIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG
Sbjct: 125 AVVGSEEEAKTKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 184

Query: 182 DLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQ 241
           DLF+DG V PRPQ+RY +RQQ  R RPRPRYDRRRET+ V R Q IQ Q+WGQ+Q DPM 
Sbjct: 185 DLFVDGMVIPRPQYRYNDRQQPSRNRPRPRYDRRRETIPVVRRQSIQGQNWGQNQSDPM- 244

Query: 242 QPPPSMDGQNTA 251
           QPPPS DGQ+ A
Sbjct: 245 QPPPSRDGQDRA 254

[Close]

BLAST of Carg05519 vs. TrEMBL
Match: tr|A0A2P2JPN1|A0A2P2JPN1_RHIMU (Uncharacterized protein MANES_15G010200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 4.8e-100
Identity = 198/271 (73.06%), Postives = 225/271 (83.03%), Query Frame = 0


Query: 1   MAARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPN---SFNFPVRFR 60
           +A RR+  ++L+R+ SSSS     PS+ SSR RFA  LLD+ + + P+   SF  P RF+
Sbjct: 4   IAIRRSLASLLTRALSSSS-----PSN-SSRSRFACALLDKTTAVSPSSPESFKIPTRFK 63

Query: 61  TSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTL 120
            SG GYSPLND SPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKP+EEEM+NSYVKTL
Sbjct: 64  NSGPGYSPLNDTSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPTEEEMINSYVKTL 123

Query: 121 AAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYG 180
           A++VGSEEEAKKKIYSV TTTYTGFGALISEELSYKVK LPGVLWVLPDSYLDVPNKDYG
Sbjct: 124 ASIVGSEEEAKKKIYSVCTTTYTGFGALISEELSYKVKGLPGVLWVLPDSYLDVPNKDYG 183

Query: 181 GDLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPM 240
           GDLFIDGKV  RPQ+ + ERQQ+ R RPRPRYDRRRETMQVER QP+Q QSWGQ Q  P+
Sbjct: 184 GDLFIDGKVIHRPQYWFNERQQT-RNRPRPRYDRRRETMQVERRQPMQTQSWGQGQGRPV 243

Query: 241 QQPPPSMDGQNTARSGVGDFSTNPGEFNRGN 269
           QQ PPS+   N+A++G  DF TN G+FN+GN
Sbjct: 244 QQ-PPSVSSHNSAQAGGRDFPTNQGQFNQGN 266

[Close]

BLAST of Carg05519 vs. TrEMBL
Match: tr|A0A200PWN8|A0A200PWN8_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9091g122 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.1e-93
Identity = 184/252 (73.02%), Postives = 206/252 (81.75%), Query Frame = 0


Query: 21  SFSLPSSISSRLRFAFPL--LDRQS--RIIPNSFNFPVRFRTSGSGYSPLNDPSPNWSNR 80
           SFS   S+SS LR+ F L  LD+Q+  ++IP S   P RF+TSGSGYSPLNDPSPNWSNR
Sbjct: 8   SFSTFRSLSSPLRYRFSLSILDKQNQPQLIPESRRIPTRFKTSGSGYSPLNDPSPNWSNR 67

Query: 81  PPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVGSEEEAKKKIYSVST 140
           PPKETILLDGCDYEHWLIVMEFPNDPKPSE+EMV +YVKTLA VVGSEEEAKKKIYSV T
Sbjct: 68  PPKETILLDGCDYEHWLIVMEFPNDPKPSEDEMVAAYVKTLANVVGSEEEAKKKIYSVCT 127

Query: 141 TTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVYPRPQFRYTE 200
           +TYTGFGALI+EELSYKVK LPGVLWVLPDSYLDVPNKDYGGDLF+DGKV  RPQF Y  
Sbjct: 128 STYTGFGALITEELSYKVKGLPGVLWVLPDSYLDVPNKDYGGDLFVDGKVIHRPQFHYNN 187

Query: 201 RQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPPPSMDGQNTARSGVGD 260
           R Q  R RPRPRYD+RRETMQV R++P+QR +WGQ Q +P  +P     GQ++ +SG  D
Sbjct: 188 RPQQTRNRPRPRYDKRRETMQVGRNEPMQRGNWGQQQGEPAFRPTV---GQDSFKSGGRD 247

Query: 261 FSTNPGEFNRGN 269
              N GEFNRGN
Sbjct: 248 PPMNQGEFNRGN 256

[Close]

BLAST of Carg05519 vs. TrEMBL
Match: tr|I3S3J6|I3S3J6_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.5e-93
Identity = 183/251 (72.91%), Postives = 209/251 (83.27%), Query Frame = 0


Query: 3   ARRTFFTVLSRSFSSSSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRTSGSG 62
           ARRT  ++L+R+ SSSSSS     +  +R RFAF L     + +P   +FPVRF++SGSG
Sbjct: 6   ARRTLASILTRALSSSSSS---GIASLNRTRFAFALSSASRQTLPIPHSFPVRFKSSGSG 65

Query: 63  YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLAAVVG 122
           YSPLNDPSPNWSNRPPKETILLDGCDYEHWLI+MEFP++PKPSE+EMVNSYVKTLA V+G
Sbjct: 66  YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVLG 125

Query: 123 SEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFI 182
           SEEEAKKKIYSVST+TY GFGAL+SEELSYK+KELPGVLWVLPDSYLDVPNKDYGGDLF+
Sbjct: 126 SEEEAKKKIYSVSTSTYIGFGALVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGDLFV 185

Query: 183 DGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQQPPP 242
           DGKV PRPQ+RYTER  S R RPRPR+DRRRETMQVER  P QRQ+W Q Q + M QP  
Sbjct: 186 DGKVIPRPQYRYTERAPS-RNRPRPRHDRRRETMQVERRDPNQRQNWNQVQGEHM-QPSN 245

Query: 243 SMDGQNTARSG 254
            M+ QN+A  G
Sbjct: 246 PMNSQNSASGG 251

The following BLAST results are available for this feature:

BLAST of Carg05519 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959433.1	2.0e-142	96.67	multiple organellar RNA editing factor 3, mitochondrial [Cucurbita moschata]	[more]
XP_023006413.1	5.1e-138	94.80	multiple organellar RNA editing factor 3, mitochondrial [Cucurbita maxima]	[more]
XP_023548315.1	2.5e-132	90.74	multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. p...	[more]
XP_022138380.1	7.4e-121	84.64	multiple organellar RNA editing factor 3, mitochondrial-like [Momordica charanti...	[more]
XP_022152262.1	2.1e-115	82.77	multiple organellar RNA editing factor 3, mitochondrial-like [Momordica charanti...	[more]

BLAST of Carg05519 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06790.1	1.3e-79	68.89	plastid developmental protein DAG, putative	[more]
AT3G15000.1	5.4e-49	56.67	cobalt ion binding	[more]
AT1G11430.1	1.7e-42	52.80	plastid developmental protein DAG, putative	[more]
AT2G35240.1	3.9e-39	48.26	plastid developmental protein DAG, putative	[more]
AT1G32580.1	4.3e-38	43.61	plastid developmental protein DAG, putative	[more]

BLAST of Carg05519 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84JZ6\|MORF3_ARATH	6.3e-79	69.33	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
sp\|Q9LKA5\|MORF8_ARATH	9.8e-48	56.67	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
sp\|Q9LPZ1\|MORF9_ARATH	3.0e-41	52.80	Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana ...	[more]
sp\|Q38732\|DAG_ANTMA	6.3e-39	53.79	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]
sp\|O82169\|MORF6_ARATH	7.0e-38	48.26	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of Carg05519 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCH1\|A0A0A0KCH1_CUCSA	1.2e-111	79.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318670 PE=4 SV=1	[more]
tr\|A0A1S3C8E0\|A0A1S3C8E0_CUCME	1.9e-104	80.16	multiple organellar RNA editing factor 3, mitochondrial-like OS=Cucumis melo OX=...	[more]
tr\|A0A2P2JPN1\|A0A2P2JPN1_RHIMU	4.8e-100	73.06	Uncharacterized protein MANES_15G010200 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]
tr\|A0A200PWN8\|A0A200PWN8_9MAGN	1.1e-93	73.02	Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9091g122 PE=4 SV=1	[more]
tr\|I3S3J6\|I3S3J6_MEDTR	1.5e-93	72.91	Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016554	cytidine to uridine editing

Vocabulary: **INTERPRO**
Term	Definition
IPR039206	MORF/ORRM1/DAG-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05519-RA	Carg05519-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..269
None	No IPR available	PANTHER	PTHR31346:SF1	MULTIPLE ORGANELLAR RNA EDITING FACTOR 3, MITOCHONDRIAL	coord: 2..252
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	FAMILY NOT NAMED	coord: 2..252

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05519	Cla009285	Watermelon (97103) v1	carwmB0073
Carg05519	Csa6G318660	Cucumber (Chinese Long) v2	carcuB0079
Carg05519	MELO3C021308	Melon (DHL92) v3.5.1	carmeB0067
Carg05519	ClCG06G004940	Watermelon (Charleston Gray)	carwcgB0073
Carg05519	CSPI06G17430	Wild cucumber (PI 183967)	carcpiB0083
Carg05519	Cucsa.069250	Cucumber (Gy14) v1	carcgyB0074
Carg05519	CmaCh17G003440	Cucurbita maxima (Rimu)	carcmaB0091
Carg05519	CmaCh08G012410	Cucurbita maxima (Rimu)	carcmaB0096
Carg05519	CmoCh17G003310	Cucurbita moschata (Rifu)	carcmoB0097
Carg05519	Lsi09G014530	Bottle gourd (USVL1VR-Ls)	carlsiB061
Carg05519	Cp4.1LG12g02850	Cucurbita pepo (Zucchini)	carcpeB0099
Carg05519	CsGy6G016880	Cucumber (Gy14) v2	carcgybB0079
Carg05519	MELO3C021308.2	Melon (DHL92) v3.6.1	carmedB0068
Carg05519	CsaV3_6G023800	Cucumber (Chinese Long) v3	carcucB0086
Carg05519	Cla97C06G114430	Watermelon (97103) v2	carwmbB0070
Carg05519	Bhi12G001801	Wax gourd	carwgoB0084

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05519	Carg18857	Silver-seed gourd	carcarB085

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05519	Silver-seed gourd	carcarB079
Carg05519	Cucumber (Gy14) v2	carcgybB0070
Carg05519	Cucumber (Gy14) v2	carcgybB0072
Carg05519	Cucumber (Gy14) v2	carcgybB0078
Carg05519	Cucumber (Gy14) v1	carcgyB0076
Carg05519	Cucumber (Gy14) v1	carcgyB0083
Carg05519	Cucurbita maxima (Rimu)	carcmaB0089
Carg05519	Cucurbita moschata (Rifu)	carcmoB0096
Carg05519	Cucurbita moschata (Rifu)	carcmoB0095
Carg05519	Cucurbita moschata (Rifu)	carcmoB0104
Carg05519	Cucurbita pepo (Zucchini)	carcpeB0098
Carg05519	Cucurbita pepo (Zucchini)	carcpeB0102
Carg05519	Cucurbita pepo (Zucchini)	carcpeB0106
Carg05519	Cucurbita pepo (Zucchini)	carcpeB0108
Carg05519	Cucurbita pepo (Zucchini)	carcpeB0109
Carg05519	Wild cucumber (PI 183967)	carcpiB0075
Carg05519	Wild cucumber (PI 183967)	carcpiB0073
Carg05519	Wild cucumber (PI 183967)	carcpiB0082
Carg05519	Cucumber (Chinese Long) v2	carcuB0078
Carg05519	Cucumber (Chinese Long) v2	carcuB0070
Carg05519	Cucumber (Chinese Long) v2	carcuB0071
Carg05519	Cucumber (Chinese Long) v3	carcucB0077
Carg05519	Cucumber (Chinese Long) v3	carcucB0079
Carg05519	Cucumber (Chinese Long) v3	carcucB0085
Carg05519	Bottle gourd (USVL1VR-Ls)	carlsiB062
Carg05519	Bottle gourd (USVL1VR-Ls)	carlsiB064
Carg05519	Bottle gourd (USVL1VR-Ls)	carlsiB065
Carg05519	Melon (DHL92) v3.5.1	carmeB0072
Carg05519	Melon (DHL92) v3.5.1	carmeB0074
Carg05519	Melon (DHL92) v3.6.1	carmedB0073
Carg05519	Melon (DHL92) v3.6.1	carmedB0075
Carg05519	Watermelon (Charleston Gray)	carwcgB0071
Carg05519	Watermelon (Charleston Gray)	carwcgB0072
Carg05519	Watermelon (97103) v1	carwmB0070
Carg05519	Watermelon (97103) v1	carwmB0071
Carg05519	Watermelon (97103) v2	carwmbB0068
Carg05519	Watermelon (97103) v2	carwmbB0069
Carg05519	Wax gourd	carwgoB0086