Cp4.1LG12g02180 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g02180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPeroxiredoxin, putative
LocationCp4.1LG12 : 1435457 .. 1437981 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTTTCATATTTATTCTTTTTTCTCTCATCCTTCGTCTCCGCCTTCCTCCATCTTTCAATTTGATAGTTGAGGATCTTGTATCAGCTAGGCTTATCTATGGCGTCCGCGATTCTGAAGCGAGTCAGCGCCTCCACGAAGAGCACGCTGGTTGAATCTATGCGAATCAGAGCGTCATCGCGAGCCTTTGCGGCGGTGGCGGTCGGAACTGACATCGTCTCCGCTGCACCGAACGTTTCTCTCCAGAAGGCTCGGAGTTGGGACGAAGGTGTCTCCTCCAAGTTCTCGACGACTCCGCTTAAAGATATTTTCAAGGTTTGTTCTTCGATTGTTCGTGTGTTTCTTTCGAGGTTAATTGTGTTAGTTTTTGAAGTATACTTGTGCTTTTTATGTAAAAATATTGGTTGTCATGAAATTTAGGGCTTTGAAGGCCACATTTGAGCTTAATGTTATGTTTTACGCTTCACATTGAATGATAGTTTAGTTTAGTCTAGTCAGTCTTTATCTTATTGATTCATTGGCCATGATATTTCAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGTAAGTCAATCTATTCAGTCTTGTACAATTGTATATATGCTATGAAATCATGGATTCTATACCAAATTGTTGCCGATGCATGTGTCTTCGTCTCTTTTTCTACGCGGTGTGCTCTTTGATTGGGGCAACAATTTTTGTATGCTCACTTTCATGATCAATGCCTTCATCCAATCCGTTAATGAACTGAGGATTTATTGTAGAGATCAGTAACAGTGTTTCGTGGTTTACATTTCATTTCTCACCTCTTAAAGATTGATCAGATACTTAGGAAGAAGAATTGTTAAATTTTTTACCACGAACTTTATTTTGTTCTGAGTAGAATAATCTATGATTTAAAGAATTATCAACTTTACTAAGTCGTGAATGTTCAAAATTTCCCCTAAATTTTTCTCCCTGGACAAACGCATTTGGTGGTATGGAGATTTGAATCCTGGTGGGACCTCTATTCCAAACTAGTTCTTACCAGTTGGAATTTCCCTATGGGACTTAGATACATATTAAATCATATAAAGATCAAGAACAACATCATCCTTACCAGTTGATGATGCACATTTTAAAGTCGGTATTCCAATTCACAGGGTGCATATACAGGAGTTTGTTCTCAGCAGCACGTTCCCAGTTACAAGAACAAAATTGATGAGTTCAAGGCTAAAGGAATTGATTCTGTTATTTGCGTGTCTGTTAATGATCCATATACCCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTGTAAGCTTCCTTGACCAGAGTTATATGGAAACTGCATAATTTTCTTTACTTGGTGTGTAATTTAGTTATTTGTCAGTACGAACTGTCTTCTAATGGCCTATTCTGATTATCTTAATTGCATTTTCCTGTCGTTATCCTGTTTATTCCTGCATAGATACAATTTTTTGGGGACTTGGATGGAAGATTTCACAAGAGCCTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTTGGTCCTCGTTCTCAAAGGTGCGATCAATCTCGTCTTTGACATGCCAAAATATTTATGGATTATGATTATTTAGCTCTTCTTTGATAACCACCTTATTTTTTATTTTTGATTCTTGAGAATTAAGCTTACAAATACTACTTCCATTTATCAGTTTTTTTTTATTTGTTTATCTACTTTTTGAGGATATTTTCAAGATTTGACAACTAAAAAAAAGTAGTTTTAAGAAACTTGTTTTCGTTTTTGAGATGTGACTATGAACGCAAATCTTTCCGTAAGAAAAATGAAAAGAAATTGTGAGAAAATAGATATAATTTTTAAAAACTAAATGGTTATCAAATAGGACGCCGGTTGCTTTTGAAGCTTATTTTAGTCTTAGGGGTCGAACTAGGTGACATTTCTACACTCTTTGACATCCTTCTTCCATGTAGATGGTCAGCATATGTTGTAGATGGCACAGTTAAGGCTCTTAACATAGAGGAAGCTCCATCCGACTTTAAGGTTACGGGGGCAGATGTCATTTTGAACCAAATTTAGAGTCAGTTTCCATTGCAACCAATTCAAGGTCTTGGATTCCGAATAAGACCATGGGTGTAACTGAGTTGTGTATGACAAAGGTTTTCTTTTGATTTTTTTGTTGGTCTGAAGTAAATCCCATGTGACGATTGCTTGGCTGCTTGGCTTCCACTTATTGTTCTTCATATATAAAATGTTCTAACTTGGATTCAGAAACTCAAAAATTTGGAAACGAGTATTCTTCAATCCAAATCAGCACTTCTCGATTGGAATAAACAGTAAGTACCAAGAGAAACAGAGCAAGGTAGGACCTTGGCCAAATCCATGCAAAATTAGGTATAGATCTTCTCCAGTTAAGGGTGTGGAGAAAGTTTCATCATCTGATTCTATTATTACTTTAAATTCATCGAGTGGAATGTTTCAAGTTGATTGAATTTCTTTATCCAATCCTTATAGTTGGTAAATCTGTTTGAAAACG

mRNA sequence

TCATTTTCATATTTATTCTTTTTTCTCTCATCCTTCGTCTCCGCCTTCCTCCATCTTTCAATTTGATAGTTGAGGATCTTGTATCAGCTAGGCTTATCTATGGCGTCCGCGATTCTGAAGCGAGTCAGCGCCTCCACGAAGAGCACGCTGGTTGAATCTATGCGAATCAGAGCGTCATCGCGAGCCTTTGCGGCGGTGGCGGTCGGAACTGACATCGTCTCCGCTGCACCGAACGTTTCTCTCCAGAAGGCTCGGAGTTGGGACGAAGGTGTCTCCTCCAAGTTCTCGACGACTCCGCTTAAAGATATTTTCAAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCTCAGCAGCACGTTCCCAGTTACAAGAACAAAATTGATGAGTTCAAGGCTAAAGGAATTGATTCTGTTATTTGCGTGTCTGTTAATGATCCATATACCCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTATACAATTTTTTGGGGACTTGGATGGAAGATTTCACAAGAGCCTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTTGGTCCTCGTTCTCAAAGATGGTCAGCATATGTTGTAGATGGCACAGTTAAGGCTCTTAACATAGAGGAAGCTCCATCCGACTTTAAGGTTACGGGGGCAGATGTCATTTTGAACCAAATTTAGAGTCAGTTTCCATTGCAACCAATTCAAGGTCTTGGATTCCGAATAAGACCATGGGTGTAACTGAGTTGTGTATGACAAAGGTTTTCTTTTGATTTTTTTGTTGGTCTGAAGTAAATCCCATGTGACGATTGCTTGGCTGCTTGGCTTCCACTTATTGTTCTTCATATATAAAATGTTCTAACTTGGATTCAGAAACTCAAAAATTTGGAAACGAGTATTCTTCAATCCAAATCAGCACTTCTCGATTGGAATAAACAGTAAGTACCAAGAGAAACAGAGCAAGGTAGGACCTTGGCCAAATCCATGCAAAATTAGGTATAGATCTTCTCCAGTTAAGGGTGTGGAGAAAGTTTCATCATCTGATTCTATTATTACTTTAAATTCATCGAGTGGAATGTTTCAAGTTGATTGAATTTCTTTATCCAATCCTTATAGTTGGTAAATCTGTTTGAAAACG

Coding sequence (CDS)

ATGGCGTCCGCGATTCTGAAGCGAGTCAGCGCCTCCACGAAGAGCACGCTGGTTGAATCTATGCGAATCAGAGCGTCATCGCGAGCCTTTGCGGCGGTGGCGGTCGGAACTGACATCGTCTCCGCTGCACCGAACGTTTCTCTCCAGAAGGCTCGGAGTTGGGACGAAGGTGTCTCCTCCAAGTTCTCGACGACTCCGCTTAAAGATATTTTCAAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCTCAGCAGCACGTTCCCAGTTACAAGAACAAAATTGATGAGTTCAAGGCTAAAGGAATTGATTCTGTTATTTGCGTGTCTGTTAATGATCCATATACCCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTATACAATTTTTTGGGGACTTGGATGGAAGATTTCACAAGAGCCTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTTGGTCCTCGTTCTCAAAGATGGTCAGCATATGTTGTAGATGGCACAGTTAAGGCTCTTAACATAGAGGAAGCTCCATCCGACTTTAAGGTTACGGGGGCAGATGTCATTTTGAACCAAATTTAG

Protein sequence

MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSSKFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDPYTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKALNIEEAPSDFKVTGADVILNQI
Homology
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BLAST of Cp4.1LG12g02180 vs. Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 4.3e-85
Identity = 157/201 (78.11%), Postives = 173/201 (86.07%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MA +ILK  + S   +   S RI  SSR F+ +A GTDI SAAP VSLQKARSWDEGVSS
Sbjct: 1   MAMSILKLRNLSALRSAANSARIGVSSRGFSKLAEGTDITSAAPGVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPL DIFKGKKVVIFGLPGAYTGVCSQQHVPSYK+ ID+FKAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           + +NGWAEKL AKDAI+F+GD DG+FHKSL LDKDLS ALLGPRS+RWSAYV DG VKA+
Sbjct: 121 FAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAV 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGA+VIL QI
Sbjct: 181 NVEEAPSDFKVTGAEVILGQI 201

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BLAST of Cp4.1LG12g02180 vs. Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-77
Identity = 143/201 (71.14%), Postives = 167/201 (83.08%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASA+L++ +    +    +   R +SR  A+V  G+DIVSAAP VSLQKARSWDEGV++
Sbjct: 1   MASALLRKATVGGSAAAAAA---RWASRGLASVGSGSDIVSAAPGVSLQKARSWDEGVAT 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
            FSTTPLKDIF GKKVVIFGLPGAYTGVCSQ HVPSYKN ID+ KAKG+DSVICVSVNDP
Sbjct: 61  NFSTTPLKDIFHGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           Y LNGWAEKL+AKDAI+F+GD DG FHKSL+L+ DLS ALLG RS RWSA+V DG +KA 
Sbjct: 121 YALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAF 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+E APSDFKV+GA+VIL+QI
Sbjct: 181 NVEVAPSDFKVSGAEVILDQI 198

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BLAST of Cp4.1LG12g02180 vs. Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.0e-27
Identity = 66/181 (36.46%), Postives = 105/181 (58.01%), Query Frame = 1 

Query: 23  IRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSSKFSTTPLKDIFKGKKVVIFGLP 82
           + AS+ A A +AVG  +    P+ +L    S+ +    +  T  ++D+  GKKVV+F +P
Sbjct: 61  VSASAPAAATIAVGDKL----PDATL----SYFDSPDGELKTVTVRDLTAGKKVVLFAVP 120

Query: 83  GAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDPYTLNGWAEKLEAKDAIQFFGDL 142
           GA+T  C+Q+HVP +  K  E +AKG+D+V CVSVND + +  W E L   D +    D 
Sbjct: 121 GAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDG 180

Query: 143 DGRFHKSLELDKDLS--VALLGPRSQRWSAYVVDGTVKALNIEEAPSDFKVTGADVILNQ 202
           +G   +++ ++ DLS   A LG RS+R++    DG VK LN+EE  + F  + A+ +L  
Sbjct: 181 NGELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGA-FTTSSAEEMLKA 232

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BLAST of Cp4.1LG12g02180 vs. Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 1 

Query: 54  WDEGVSSKFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVI 113
           W +G   K     +  +  GKKVV+FG+PGA+T  CS QHVP + N+ ++ KAKG+D ++
Sbjct: 17  WFDG-EDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDIL 76

Query: 114 CVSVNDPYTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVV 173
            VSVNDP+ +  WA+       ++F  D  G + K+L L+ DLS   LG RS+R++    
Sbjct: 77  LVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLAD 136

Query: 174 DGTVKALNIEEAPSDFKVTGADVILNQI 202
           +  V   NIEE    F ++GA+ IL  +
Sbjct: 137 NLKVTVANIEEG-GQFTISGAEEILKAL 162

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BLAST of Cp4.1LG12g02180 vs. Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-24
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  +  GKKV++FG+PGA+T  CS +HVP +  K +E K+KG+D +IC SVN
Sbjct: 21  NDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +       ++F  D  G +   L L+ DL    LG RS+R++  + D  V 
Sbjct: 81  DPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ AD IL  +
Sbjct: 141 VANVESG-GEFTVSSADDILKAL 162

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BLAST of Cp4.1LG12g02180 vs. TrEMBL
Match: A0A0A0KB73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G153480 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-98
Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAILKRVSAS  S+LVES+RI ASSR FAAVAVGTDIVSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASAILKRVSASAMSSLVESIRIGASSRNFAAVAVGTDIVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLK+IFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDE KAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLKEIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDELKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLNGWAEK++AKDAIQFFGD DG+FHKSLELDKDLSVALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTLNGWAEKIQAKDAIQFFGDFDGKFHKSLELDKDLSVALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGADVILNQI
Sbjct: 181 NVEEAPSDFKVTGADVILNQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. TrEMBL
Match: A0A067KVF3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02125 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.6e-86
Identity = 158/201 (78.61%), Postives = 179/201 (89.05%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAI++R   S    +V+++RI  SSR++A +AVGTD+V AAP+VSLQKAR+WDEGVSS
Sbjct: 1   MASAIIRRTCNSALKPMVDALRIGGSSRSYAKIAVGTDLVLAAPDVSLQKARTWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQ HVPSYKN ID+FKAKGIDSVICV+VNDP
Sbjct: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLN WAEKL+A DAI+F+GD DGRFHKSLELDKDLSVALLGPRS+RW+AYV DG VK L
Sbjct: 121 YTLNSWAEKLQANDAIEFYGDFDGRFHKSLELDKDLSVALLGPRSERWAAYVEDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           NIEEAPSDFKV+G + IL QI
Sbjct: 181 NIEEAPSDFKVSGGEAILGQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. TrEMBL
Match: W9QVC2_9ROSA (Peroxiredoxin-2F OS=Morus notabilis GN=L484_007342 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.3e-85
Identity = 162/209 (77.51%), Postives = 179/209 (85.65%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS++LKR S S    +  ++ I  SSRA+AA+A GTDIVSAAPNVSLQKARSWDEGVSS
Sbjct: 1   MASSLLKRTSYSAMKLVAGALAIGGSSRAYAAIAAGTDIVSAAPNVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKG--------KKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSV 120
           KFS TP+KDIFK         KKVVIFGLPGAYTGVCSQQHVPSYKN ID+FKAKGIDSV
Sbjct: 61  KFSATPVKDIFKARFLYPYFDKKVVIFGLPGAYTGVCSQQHVPSYKNNIDKFKAKGIDSV 120

Query: 121 ICVSVNDPYTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYV 180
           ICV+VNDPY LNGWAEKL+AKDAI+F+GD DG FHK+L+LDKDLSVALLGPRS RWSAYV
Sbjct: 121 ICVAVNDPYVLNGWAEKLQAKDAIEFYGDFDGGFHKALDLDKDLSVALLGPRSHRWSAYV 180

Query: 181 VDGTVKALNIEEAPSDFKVTGADVILNQI 202
           VDG VKA N+EEAPSDFKV+GADVIL QI
Sbjct: 181 VDGKVKAFNLEEAPSDFKVSGADVILGQI 209

[Close]
BLAST of Cp4.1LG12g02180 vs. TrEMBL
Match: A0A061EL45_THECC (Peroxiredoxin IIF OS=Theobroma cacao GN=TCM_020545 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.1e-85
Identity = 156/201 (77.61%), Postives = 179/201 (89.05%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS ILKRV++S   + +ES+   AS R++A+VA GTDIV+AAP V LQKARSWDEGVSS
Sbjct: 1   MASTILKRVTSSAIKSRLESLLTGASRRSYASVAAGTDIVNAAPGVCLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
            FSTTPLKDIF GKKVV+FGLPGAYTGVCSQQHVPSYK  +D+FKAKGIDSVICV+VNDP
Sbjct: 61  NFSTTPLKDIFTGKKVVVFGLPGAYTGVCSQQHVPSYKKNVDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YT+N WA+KL+AKDAI+F+GD DG FHKSLEL+KDLS ALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTMNAWADKLQAKDAIEFYGDFDGSFHKSLELEKDLSAALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKV+GA+VIL QI
Sbjct: 181 NVEEAPSDFKVSGAEVILEQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. TrEMBL
Match: M5XGR6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011667mg PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.9e-84
Identity = 157/201 (78.11%), Postives = 174/201 (86.57%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS +LKR S S   ++    ++ A SRA+AAVA GTDIVSAAPNVSLQKAR+WDEGVSS
Sbjct: 1   MASTLLKRASYSAMKSVAGGFQMGAQSRAYAAVAAGTDIVSAAPNVSLQKARTWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
            F+TTPLKDIFK KKVVIFGLPGA+TGVCSQQHVPSYK +ID+FKAKGIDSVICV+VNDP
Sbjct: 61  NFATTPLKDIFKDKKVVIFGLPGAFTGVCSQQHVPSYKKQIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           Y +NGWA KLEA DAI+F+GD DG FHKSLELDKDLS ALLGPRSQRWSAYVVDG VK L
Sbjct: 121 YVMNGWANKLEATDAIEFYGDFDGSFHKSLELDKDLSGALLGPRSQRWSAYVVDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EE PSDFKV+G DVIL QI
Sbjct: 181 NVEEVPSDFKVSGGDVILGQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. TAIR10
Match: AT3G06050.1 (AT3G06050.1 peroxiredoxin IIF)

HSP 1 Score: 315.5 bits (807), Expect = 2.4e-86
Identity = 157/201 (78.11%), Postives = 173/201 (86.07%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MA +ILK  + S   +   S RI  SSR F+ +A GTDI SAAP VSLQKARSWDEGVSS
Sbjct: 1   MAMSILKLRNLSALRSAANSARIGVSSRGFSKLAEGTDITSAAPGVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPL DIFKGKKVVIFGLPGAYTGVCSQQHVPSYK+ ID+FKAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           + +NGWAEKL AKDAI+F+GD DG+FHKSL LDKDLS ALLGPRS+RWSAYV DG VKA+
Sbjct: 121 FAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAV 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGA+VIL QI
Sbjct: 181 NVEEAPSDFKVTGAEVILGQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. TAIR10
Match: AT1G65980.1 (AT1G65980.1 thioredoxin-dependent peroxidase 1)

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-25
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  +  GKKV++FG+PGA+T  CS +HVP +  K +E K+KG+D +IC SVN
Sbjct: 21  NDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +       ++F  D  G +   L L+ DL    LG RS+R++  + D  V 
Sbjct: 81  DPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ AD IL  +
Sbjct: 141 VANVESG-GEFTVSSADDILKAL 162

[Close]
BLAST of Cp4.1LG12g02180 vs. TAIR10
Match: AT1G60740.1 (AT1G60740.1 Thioredoxin superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  I  GKKV++FG+PGA+T  CS  HVP +  K +E K+KGID +IC SVN
Sbjct: 21  NDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +  +    ++F  D  G +   L L+ DL    LG RS+R++  + +  V 
Sbjct: 81  DPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ A+ IL  +
Sbjct: 141 VANVENG-GEFTVSSAEDILKAL 162

[Close]
BLAST of Cp4.1LG12g02180 vs. TAIR10
Match: AT1G65970.1 (AT1G65970.1 thioredoxin-dependent peroxidase 2)

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  I  GKKV++FG+PGA+T  CS  HVP +  K +E K+KGID +IC SVN
Sbjct: 21  NDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +       ++F  D  G +   L L+ DL    LG RS+R++  + +  V 
Sbjct: 81  DPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ A+ IL  +
Sbjct: 141 VANVESG-GEFTVSSAEDILKAL 162

[Close]
BLAST of Cp4.1LG12g02180 vs. TAIR10
Match: AT3G52960.1 (AT3G52960.1 Thioredoxin superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 58/177 (32.77%), Postives = 94/177 (53.11%), Query Frame = 1 

Query: 25  ASSRAFAAVAVGTDIV--SAAPNVSLQKARSWDEGVSSKFSTTPLKDIFKGKKVVIFGLP 84
           A++R+FA   V   I      P+ +L    S+ +  +    T  +  +  GKK ++F +P
Sbjct: 59  ATTRSFATTPVTASISVGDKLPDSTL----SYLDPSTGDVKTVTVSSLTAGKKTILFAVP 118

Query: 85  GAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDPYTLNGWAEKLEAKDAIQFFGDL 144
           GA+T  CSQ+HVP + +K  E ++KGID + C+SVND + +  W + L   D +    D 
Sbjct: 119 GAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDG 178

Query: 145 DGRFHKSLELDKDL--SVALLGPRSQRWSAYVVDGTVKALNIEEAPSDFKVTGADVI 198
           +G F   L ++ DL      LG RS+R++    DG VK LN+EE  +    +  D++
Sbjct: 179 NGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDML 231

[Close]
BLAST of Cp4.1LG12g02180 vs. NCBI nr
Match: gi|659117372|ref|XP_008458567.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis melo])

HSP 1 Score: 370.2 bits (949), Expect = 2.4e-99
Identity = 187/201 (93.03%), Postives = 194/201 (96.52%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAILKRVSAS  S+LVES+RI ASSR FAAVAVGTDIVSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASAILKRVSASAMSSLVESIRIGASSRNFAAVAVGTDIVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSY NKIDEFKAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYNNKIDEFKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLNGWAEKL+AKDAIQFFGD DG+FHKSLELDKDLSVALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTLNGWAEKLQAKDAIQFFGDFDGKFHKSLELDKDLSVALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGADVILNQI
Sbjct: 181 NVEEAPSDFKVTGADVILNQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. NCBI nr
Match: gi|449463086|ref|XP_004149265.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.5e-98
Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAILKRVSAS  S+LVES+RI ASSR FAAVAVGTDIVSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASAILKRVSASAMSSLVESIRIGASSRNFAAVAVGTDIVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLK+IFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDE KAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLKEIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDELKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLNGWAEK++AKDAIQFFGD DG+FHKSLELDKDLSVALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTLNGWAEKIQAKDAIQFFGDFDGKFHKSLELDKDLSVALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGADVILNQI
Sbjct: 181 NVEEAPSDFKVTGADVILNQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. NCBI nr
Match: gi|470121747|ref|XP_004296922.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 326.2 bits (835), Expect = 3.9e-86
Identity = 163/201 (81.09%), Postives = 179/201 (89.05%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS++LKR S S   + V      AS RA+AAVAVGTD+VSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASSLLKRASYSAMKSAVG-----ASPRAYAAVAVGTDLVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKD+FK KKVVIFGLPGAYTGVCSQQHVPSYKN ID+FKAKGIDSVICV+VNDP
Sbjct: 61  KFSTTPLKDLFKDKKVVIFGLPGAYTGVCSQQHVPSYKNNIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           + LNGWA+KLEAKD+I+F+GD DG FHKSLELDKDLSVALLGPRSQRWSAYVVDG VK L
Sbjct: 121 FVLNGWADKLEAKDSIEFYGDFDGSFHKSLELDKDLSVALLGPRSQRWSAYVVDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKV+G DVIL QI
Sbjct: 181 NVEEAPSDFKVSGGDVILGQI 196

[Close]
BLAST of Cp4.1LG12g02180 vs. NCBI nr
Match: gi|802580347|ref|XP_012069555.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Jatropha curcas])

HSP 1 Score: 325.5 bits (833), Expect = 6.6e-86
Identity = 158/201 (78.61%), Postives = 179/201 (89.05%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAI++R   S    +V+++RI  SSR++A +AVGTD+V AAP+VSLQKAR+WDEGVSS
Sbjct: 1   MASAIIRRTCNSALKPMVDALRIGGSSRSYAKIAVGTDLVLAAPDVSLQKARTWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQ HVPSYKN ID+FKAKGIDSVICV+VNDP
Sbjct: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLN WAEKL+A DAI+F+GD DGRFHKSLELDKDLSVALLGPRS+RW+AYV DG VK L
Sbjct: 121 YTLNSWAEKLQANDAIEFYGDFDGRFHKSLELDKDLSVALLGPRSERWAAYVEDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           NIEEAPSDFKV+G + IL QI
Sbjct: 181 NIEEAPSDFKVSGGEAILGQI 201

[Close]
BLAST of Cp4.1LG12g02180 vs. NCBI nr
Match: gi|729365297|ref|XP_010546853.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Tarenaya hassleriana])

HSP 1 Score: 325.5 bits (833), Expect = 6.6e-86
Identity = 160/201 (79.60%), Postives = 176/201 (87.56%), Query Frame = 1 

Query: 1   MASAILKRVSASTKSTLVESMRIRASSRAFAAVAVGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS++LK  S S   + V S+RI  SSR FA +A GTDI SAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASSVLKLRSTSLMRSAVNSVRIGVSSRGFAKLATGTDITSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFST PL DIFKGKKVVIFGLPGAYTGVCSQQHVPSYKN ID+FKAKG+DSVICV+VNDP
Sbjct: 61  KFSTIPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNSIDKFKAKGVDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDLDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           Y LNGWAEKL+AKDAI+F+GD DG+FHKSL LDKDLS ALLGPRS+RWSAYV DGTVK L
Sbjct: 121 YVLNGWAEKLQAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGTVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKV+GAD IL QI
Sbjct: 181 NVEEAPSDFKVSGADFILGQI 201

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g02180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRX2F_ARATH4.3e-8578.11Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2[more]
PRX2F_ORYSJ1.5e-7771.14Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 S... [more]
PR2E1_ORYSJ7.0e-2736.46Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE... [more]
PRX2C_ORYSJ1.0e-2539.19Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1[more]
PRX2B_ARATH5.5e-2436.36Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1[more]
BLAST of Cp4.1LG12g02180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB73_CUCSA1.1e-9892.04Uncharacterized protein OS=Cucumis sativus GN=Csa_6G153480 PE=4 SV=1[more]
A0A067KVF3_JATCU4.6e-8678.61Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02125 PE=4 SV=1[more]
W9QVC2_9ROSA2.3e-8577.51Peroxiredoxin-2F OS=Morus notabilis GN=L484_007342 PE=4 SV=1[more]
A0A061EL45_THECC5.1e-8577.61Peroxiredoxin IIF OS=Theobroma cacao GN=TCM_020545 PE=4 SV=1[more]
M5XGR6_PRUPE1.9e-8478.11Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011667mg PE=4 SV=1[more]
BLAST of Cp4.1LG12g02180 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06050.12.4e-8678.11 peroxiredoxin IIF[more]
AT1G65980.13.1e-2536.36 thioredoxin-dependent peroxidase 1[more]
AT1G60740.11.2e-2436.36 Thioredoxin superfamily protein[more]
AT1G65970.12.6e-2436.36 thioredoxin-dependent peroxidase 2[more]
AT3G52960.11.7e-2332.77 Thioredoxin superfamily protein[more]
BLAST of Cp4.1LG12g02180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117372|ref|XP_008458567.1|2.4e-9993.03PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis melo][more]
gi|449463086|ref|XP_004149265.1|1.5e-9892.04PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis sativus][more]
gi|470121747|ref|XP_004296922.1|3.9e-8681.09PREDICTED: peroxiredoxin-2F, mitochondrial [Fragaria vesca subsp. vesca][more]
gi|802580347|ref|XP_012069555.1|6.6e-8678.61PREDICTED: peroxiredoxin-2F, mitochondrial [Jatropha curcas][more]
gi|729365297|ref|XP_010546853.1|6.6e-8679.60PREDICTED: peroxiredoxin-2F, mitochondrial [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR013740Redoxin
IPR012336Thioredoxin-like_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005575 cellular_component
cellular_component GO:0005623 cell
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0051920 peroxiredoxin activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g02180.1Cp4.1LG12g02180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 41..201
score: 5.8
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 58..191
score: 3.36
IPR013740RedoxinPFAMPF08534Redoxincoord: 43..195
score: 2.0
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 37..201
score: 10
NoneNo IPR availablePANTHERPTHR10430PEROXIREDOXINcoord: 19..201
score: 5.4E
NoneNo IPR availablePANTHERPTHR10430:SF7PEROXIREDOXIN-2F, MITOCHONDRIALcoord: 19..201
score: 5.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g02180CmaCh17G002640Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g02180CmaCh08G011630Cucurbita maxima (Rimu)cmacpeB895
Cp4.1LG12g02180CmoCh08G011350Cucurbita moschata (Rifu)cmocpeB833
Cp4.1LG12g02180CmoCh17G002520Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g02180Cla009381Watermelon (97103) v1cpewmB161
Cp4.1LG12g02180MELO3C021410Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g02180ClCG06G005880Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g02180Lsi09G013480Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g02180MELO3C021410.2Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g02180CsaV3_6G015110Cucumber (Chinese Long) v3cpecucB0174
Cp4.1LG12g02180Bhi12G001609Wax gourdcpewgoB0180
Cp4.1LG12g02180CsGy6G012750Cucumber (Gy14) v2cgybcpeB730
Cp4.1LG12g02180Carg15920Silver-seed gourdcarcpeB0450
Cp4.1LG12g02180Carg05444Silver-seed gourdcarcpeB0099
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g02180Cp4.1LG17g01370Cucurbita pepo (Zucchini)cpecpeB169
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g02180Wild cucumber (PI 183967)cpecpiB133
Cp4.1LG12g02180Cucumber (Chinese Long) v2cpecuB132
Cp4.1LG12g02180Bottle gourd (USVL1VR-Ls)cpelsiB112
Cp4.1LG12g02180Bottle gourd (USVL1VR-Ls)cpelsiB118
Cp4.1LG12g02180Bottle gourd (USVL1VR-Ls)cpelsiB123
Cp4.1LG12g02180Watermelon (Charleston Gray)cpewcgB131
Cp4.1LG12g02180Watermelon (Charleston Gray)cpewcgB149
Cp4.1LG12g02180Watermelon (97103) v1cpewmB137
Cp4.1LG12g02180Watermelon (97103) v1cpewmB146
Cp4.1LG12g02180Watermelon (97103) v1cpewmB152
Cp4.1LG12g02180Melon (DHL92) v3.5.1cpemeB140
Cp4.1LG12g02180Cucumber (Gy14) v2cgybcpeB303
Cp4.1LG12g02180Melon (DHL92) v3.6.1cpemedB170
Cp4.1LG12g02180Silver-seed gourdcarcpeB0315
Cp4.1LG12g02180Silver-seed gourdcarcpeB0857
Cp4.1LG12g02180Silver-seed gourdcarcpeB1056
Cp4.1LG12g02180Cucumber (Chinese Long) v3cpecucB0154
Cp4.1LG12g02180Cucumber (Chinese Long) v3cpecucB0187
Cp4.1LG12g02180Wax gourdcpewgoB0188
Cp4.1LG12g02180Wax gourdcpewgoB0195
Cp4.1LG12g02180Wax gourdcpewgoB0213
Cp4.1LG12g02180Cucurbita pepo (Zucchini)cpecpeB154
Cp4.1LG12g02180Cucurbita pepo (Zucchini)cpecpeB177
Cp4.1LG12g02180Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG12g02180Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG12g02180Cucumber (Gy14) v1cgycpeB0671
Cp4.1LG12g02180Cucurbita maxima (Rimu)cmacpeB262
Cp4.1LG12g02180Cucurbita maxima (Rimu)cmacpeB810
Cp4.1LG12g02180Cucurbita moschata (Rifu)cmocpeB225
Cp4.1LG12g02180Cucurbita moschata (Rifu)cmocpeB478
Cp4.1LG12g02180Cucurbita moschata (Rifu)cmocpeB765