CmaCh17G002640 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G002640
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPeroxiredoxin-2F
LocationCma_Chr17 : 1362733 .. 1365008 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCATCCTGCGTCTCCTCCCTCTATAGTTGAGGATCTTGTATCAGCTAGGCTTATCTATGGCGTCCGCGATTCTGAAGCGAGTCAGCGCCTCCGCGAAGAGCACGCTGGTTGAATCTATGCGAAGCAGAGCGTCATCGCGAGCCTTTGCGGCGGTGGCGATCGGAACTGACATCGTTTCCGCCGCACCGAACGTTTCTCTCCAGAAGGCTCGGAGTTGGGACGAAGGTGTCTCCTCCAAGTTCTCGACGACTCCGCTTAAAGATATTTTCGAGGTTTGTTCTTCGGTTGTTCGTGTATTTCTTTCGAGGTTAATTGTGTTAGTTTTTGAAGTATACTTGTGCTTTTTATGAAAAAATATTGATTGTTCATGAAATTTAGGGCTTTGAAGGCCACATTTGAGCTTAATGTTATGTTTTACGCTTTACATTGAATGATAGTTTAGTTTAGTCTAGTCAGTCTTTATCTTATTGATTCATTGGCCATGATATTTCAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGTAAGTCAATCTATTCAGTCTTGTACAATTGTATATATGCTATGAAATCATGGATTCTATACCAAATTGTTGCCGATGCATGTGTTTTCATCTCTTTTTCTACGCGGTGTGCTCTTTGATTGGGGCTACAATTTTTGTATGCTCACTTTCATGATCAATGCCTTCATCCAATCCGTTAATGAACTGAGGATTTATTGTAGAGATCAGTAAAACAATGTTTCGTGGTTTACATTTCATTTCTGACCTCTTAAAGATTGATACTTAGGAAGAAGAATTGTTAAATTTGTTACCACGAACTTTATTTTGTTCTCAGTAGAATAATCTATGATTTAAAGAATTATCAACTTTACGAAGTCGTGAATGTTCAAAATTTCCCCTAAATTCTTCTCCCTGGACAAACGCATTTGGTGGTATGGAGATTTGAATCCTGGCGGGACCTCTATTCCAAACTAGTTCTTACCAGTTGGAATTTCCCTATGGGACTTAGATACATATTAAATCATATAAAGATCAAGAACGACATCATCCTTACCAATTGATGATGCACATTTTAAAGTCGGTATTCCAATTCACAGGGTGCATATACAGGAGTTTGTTCTCAGCAGCACGTTCCCAGTTACAAGAACAAAATTGATGAGTTCAAGGCTAAAGGAATTGATTCTGTTATTTGCGTGTCTGTTAATGATCCATATACCCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTGTAAGCTTCCTTGACCAGAGTTATATGGAAACTGCATAATTTTCTTTACTTGGTGTGTATAATTTAGTTATTTGTCAGTACGAACTGTCTTCTAATGGCCTATTCTGATTGTCTTAATTGCATTGTCCTGTCGTTATTCTGTTTATTCCTGCATAGATACAATTTTTTGGGGACTTCGATGGAAGATTTCACAAGAGCCTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTTGGTCCTCGTTCTCAAAGGTACGATCAATCTCATCTTTGACATGCCAAAATATTTATGGATTATGATTATTTAGCTCTTCTTTGATAACCACCTTATTTTTTATTTTTGATTCTTGAGAATTAAGTTTATAAATACTACTTCCATTTATCAGTTTTTTTGATTTGTTATCTTTTTGAGGATATTTTCAAGATTTGACAACTAAAAGTTTTAAGAAACTTGTTTTTGTTTTTGAGATGTGACTATGAACGCAAATCTTTCCGTAAGAAAAATGAAAAGAAATTGTGAGAAAATAAATATAATTTTTAAAAACTAAATGGTTATCAAATAGGTAGACATTTCTACACTCTTTGACATCCTTCTTCCCTGTAGATGGTCAGCATATGTTGTAGATGGCACAGTTAAGGCTCTTAACATAGAGGAAGCTCCATCCGACTTTAAGGTTACGGGGGCAGATGTCATTTTGAACCAAATTTAGAGTCAGTTTCCATTGCAACCAATTCAAGGTCTTGGATTCCGAATAAGACCATGGGTGTAACTGAGTTGTGTATGACAAAGGTTTTCTTTTGATTTTTTTTGTTGGTCGGAAGTAAAATCCCATGTGACGATTGCTTGGCAGCTTGGCGTCCACTTATTGTTCTTCATATATAAAATGTTCTAACTTGGATTCAGAAACACAAAAATTTGGAAACGAGTATTCTTCAATCCAAATCATCACTTCTCGATTGGAATAAACAGTAAGTACATAGAGAAACAGAGCAAGGTTGGACCTTGGCCAAATCCAT

mRNA sequence

CTCTCATCCTGCGTCTCCTCCCTCTATAGTTGAGGATCTTGTATCAGCTAGGCTTATCTATGGCGTCCGCGATTCTGAAGCGAGTCAGCGCCTCCGCGAAGAGCACGCTGGTTGAATCTATGCGAAGCAGAGCGTCATCGCGAGCCTTTGCGGCGGTGGCGATCGGAACTGACATCGTTTCCGCCGCACCGAACGTTTCTCTCCAGAAGGCTCGGAGTTGGGACGAAGGTGTCTCCTCCAAGTTCTCGACGACTCCGCTTAAAGATATTTTCGAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCTCAGCAGCACGTTCCCAGTTACAAGAACAAAATTGATGAGTTCAAGGCTAAAGGAATTGATTCTGTTATTTGCGTGTCTGTTAATGATCCATATACCCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTATACAATTTTTTGGGGACTTCGATGGAAGATTTCACAAGAGCCTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTTGGTCCTCGTTCTCAAAGATGGTCAGCATATGTTGTAGATGGCACAGTTAAGGCTCTTAACATAGAGGAAGCTCCATCCGACTTTAAGGTTACGGGGGCAGATGTCATTTTGAACCAAATTTAGAGTCAGTTTCCATTGCAACCAATTCAAGGTCTTGGATTCCGAATAAGACCATGGGTGTAACTGAGTTGTGTATGACAAAGGTTTTCTTTTGATTTTTTTTGTTGGTCGGAAGTAAAATCCCATGTGACGATTGCTTGGCAGCTTGGCGTCCACTTATTGTTCTTCATATATAAAATGTTCTAACTTGGATTCAGAAACACAAAAATTTGGAAACGAGTATTCTTCAATCCAAATCATCACTTCTCGATTGGAATAAACAGTAAGTACATAGAGAAACAGAGCAAGGTTGGACCTTGGCCAAATCCAT

Coding sequence (CDS)

ATGGCGTCCGCGATTCTGAAGCGAGTCAGCGCCTCCGCGAAGAGCACGCTGGTTGAATCTATGCGAAGCAGAGCGTCATCGCGAGCCTTTGCGGCGGTGGCGATCGGAACTGACATCGTTTCCGCCGCACCGAACGTTTCTCTCCAGAAGGCTCGGAGTTGGGACGAAGGTGTCTCCTCCAAGTTCTCGACGACTCCGCTTAAAGATATTTTCGAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCTCAGCAGCACGTTCCCAGTTACAAGAACAAAATTGATGAGTTCAAGGCTAAAGGAATTGATTCTGTTATTTGCGTGTCTGTTAATGATCCATATACCCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTATACAATTTTTTGGGGACTTCGATGGAAGATTTCACAAGAGCCTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTTGGTCCTCGTTCTCAAAGATGGTCAGCATATGTTGTAGATGGCACAGTTAAGGCTCTTAACATAGAGGAAGCTCCATCCGACTTTAAGGTTACGGGGGCAGATGTCATTTTGAACCAAATTTAG

Protein sequence

MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSSKFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDPYTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKALNIEEAPSDFKVTGADVILNQI
Homology
[Close]
BLAST of CmaCh17G002640 vs. Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 7.3e-85
Identity = 157/201 (78.11%), Postives = 174/201 (86.57%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MA +ILK  + SA  +   S R   SSR F+ +A GTDI SAAP VSLQKARSWDEGVSS
Sbjct: 1   MAMSILKLRNLSALRSAANSARIGVSSRGFSKLAEGTDITSAAPGVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPL DIF+GKKVVIFGLPGAYTGVCSQQHVPSYK+ ID+FKAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           + +NGWAEKL AKDAI+F+GDFDG+FHKSL LDKDLS ALLGPRS+RWSAYV DG VKA+
Sbjct: 121 FAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAV 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGA+VIL QI
Sbjct: 181 NVEEAPSDFKVTGAEVILGQI 201

[Close]
BLAST of CmaCh17G002640 vs. Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.8e-78
Identity = 144/201 (71.64%), Postives = 169/201 (84.08%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASA+L++ +    +    +  +R +SR  A+V  G+DIVSAAP VSLQKARSWDEGV++
Sbjct: 1   MASALLRKATVGGSAA---AAAARWASRGLASVGSGSDIVSAAPGVSLQKARSWDEGVAT 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
            FSTTPLKDIF GKKVVIFGLPGAYTGVCSQ HVPSYKN ID+ KAKG+DSVICVSVNDP
Sbjct: 61  NFSTTPLKDIFHGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           Y LNGWAEKL+AKDAI+F+GDFDG FHKSL+L+ DLS ALLG RS RWSA+V DG +KA 
Sbjct: 121 YALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAF 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+E APSDFKV+GA+VIL+QI
Sbjct: 181 NVEVAPSDFKVSGAEVILDQI 198

[Close]
BLAST of CmaCh17G002640 vs. Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.1e-27
Identity = 65/179 (36.31%), Postives = 104/179 (58.10%), Query Frame = 1 

Query: 25  ASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSSKFSTTPLKDIFEGKKVVIFGLPGA 84
           AS+ A A +A+G  +    P+ +L    S+ +    +  T  ++D+  GKKVV+F +PGA
Sbjct: 63  ASAPAAATIAVGDKL----PDATL----SYFDSPDGELKTVTVRDLTAGKKVVLFAVPGA 122

Query: 85  YTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDPYTLNGWAEKLEAKDAIQFFGDFDG 144
           +T  C+Q+HVP +  K  E +AKG+D+V CVSVND + +  W E L   D +    D +G
Sbjct: 123 FTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNG 182

Query: 145 RFHKSLELDKDLS--VALLGPRSQRWSAYVVDGTVKALNIEEAPSDFKVTGADVILNQI 202
              +++ ++ DLS   A LG RS+R++    DG VK LN+EE  + F  + A+ +L  +
Sbjct: 183 ELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGA-FTTSSAEEMLKAL 232

[Close]
BLAST of CmaCh17G002640 vs. Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.9e-26
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 1 

Query: 54  WDEGVSSKFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVI 113
           W +G   K     +  +  GKKVV+FG+PGA+T  CS QHVP + N+ ++ KAKG+D ++
Sbjct: 17  WFDG-EDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDIL 76

Query: 114 CVSVNDPYTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVV 173
            VSVNDP+ +  WA+       ++F  D  G + K+L L+ DLS   LG RS+R++    
Sbjct: 77  LVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLAD 136

Query: 174 DGTVKALNIEEAPSDFKVTGADVILNQI 202
           +  V   NIEE    F ++GA+ IL  +
Sbjct: 137 NLKVTVANIEEG-GQFTISGAEEILKAL 162

[Close]
BLAST of CmaCh17G002640 vs. Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.2e-24
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  +  GKKV++FG+PGA+T  CS +HVP +  K +E K+KG+D +IC SVN
Sbjct: 21  NDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +       ++F  D  G +   L L+ DL    LG RS+R++  + D  V 
Sbjct: 81  DPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ AD IL  +
Sbjct: 141 VANVESG-GEFTVSSADDILKAL 162

[Close]
BLAST of CmaCh17G002640 vs. TrEMBL
Match: A0A0A0KB73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G153480 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 184/201 (91.54%), Postives = 195/201 (97.01%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAILKRVSASA S+LVES+R  ASSR FAAVA+GTDIVSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASAILKRVSASAMSSLVESIRIGASSRNFAAVAVGTDIVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLK+IF+GKKVVIFGLPGAYTGVCSQQHVPSYKNKIDE KAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLKEIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDELKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLNGWAEK++AKDAIQFFGDFDG+FHKSLELDKDLSVALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTLNGWAEKIQAKDAIQFFGDFDGKFHKSLELDKDLSVALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGADVILNQI
Sbjct: 181 NVEEAPSDFKVTGADVILNQI 201

[Close]
BLAST of CmaCh17G002640 vs. TrEMBL
Match: A0A061EL45_THECC (Peroxiredoxin IIF OS=Theobroma cacao GN=TCM_020545 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.5e-86
Identity = 158/201 (78.61%), Postives = 182/201 (90.55%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS ILKRV++SA  + +ES+ + AS R++A+VA GTDIV+AAP V LQKARSWDEGVSS
Sbjct: 1   MASTILKRVTSSAIKSRLESLLTGASRRSYASVAAGTDIVNAAPGVCLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
            FSTTPLKDIF GKKVV+FGLPGAYTGVCSQQHVPSYK  +D+FKAKGIDSVICV+VNDP
Sbjct: 61  NFSTTPLKDIFTGKKVVVFGLPGAYTGVCSQQHVPSYKKNVDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YT+N WA+KL+AKDAI+F+GDFDG FHKSLEL+KDLS ALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTMNAWADKLQAKDAIEFYGDFDGSFHKSLELEKDLSAALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKV+GA+VIL QI
Sbjct: 181 NVEEAPSDFKVSGAEVILEQI 201

[Close]
BLAST of CmaCh17G002640 vs. TrEMBL
Match: A0A067KVF3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02125 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 7.9e-86
Identity = 157/201 (78.11%), Postives = 180/201 (89.55%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAI++R   SA   +V+++R   SSR++A +A+GTD+V AAP+VSLQKAR+WDEGVSS
Sbjct: 1   MASAIIRRTCNSALKPMVDALRIGGSSRSYAKIAVGTDLVLAAPDVSLQKARTWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKDIF+GKKVVIFGLPGAYTGVCSQ HVPSYKN ID+FKAKGIDSVICV+VNDP
Sbjct: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLN WAEKL+A DAI+F+GDFDGRFHKSLELDKDLSVALLGPRS+RW+AYV DG VK L
Sbjct: 121 YTLNSWAEKLQANDAIEFYGDFDGRFHKSLELDKDLSVALLGPRSERWAAYVEDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           NIEEAPSDFKV+G + IL QI
Sbjct: 181 NIEEAPSDFKVSGGEAILGQI 201

[Close]
BLAST of CmaCh17G002640 vs. TrEMBL
Match: W9QVC2_9ROSA (Peroxiredoxin-2F OS=Morus notabilis GN=L484_007342 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.9e-85
Identity = 162/209 (77.51%), Postives = 180/209 (86.12%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS++LKR S SA   +  ++    SSRA+AA+A GTDIVSAAPNVSLQKARSWDEGVSS
Sbjct: 1   MASSLLKRTSYSAMKLVAGALAIGGSSRAYAAIAAGTDIVSAAPNVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEG--------KKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSV 120
           KFS TP+KDIF+         KKVVIFGLPGAYTGVCSQQHVPSYKN ID+FKAKGIDSV
Sbjct: 61  KFSATPVKDIFKARFLYPYFDKKVVIFGLPGAYTGVCSQQHVPSYKNNIDKFKAKGIDSV 120

Query: 121 ICVSVNDPYTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYV 180
           ICV+VNDPY LNGWAEKL+AKDAI+F+GDFDG FHK+L+LDKDLSVALLGPRS RWSAYV
Sbjct: 121 ICVAVNDPYVLNGWAEKLQAKDAIEFYGDFDGGFHKALDLDKDLSVALLGPRSHRWSAYV 180

Query: 181 VDGTVKALNIEEAPSDFKVTGADVILNQI 202
           VDG VKA N+EEAPSDFKV+GADVIL QI
Sbjct: 181 VDGKVKAFNLEEAPSDFKVSGADVILGQI 209

[Close]
BLAST of CmaCh17G002640 vs. TrEMBL
Match: M5XGR6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011667mg PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-84
Identity = 158/201 (78.61%), Postives = 175/201 (87.06%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS +LKR S SA  ++    +  A SRA+AAVA GTDIVSAAPNVSLQKAR+WDEGVSS
Sbjct: 1   MASTLLKRASYSAMKSVAGGFQMGAQSRAYAAVAAGTDIVSAAPNVSLQKARTWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
            F+TTPLKDIF+ KKVVIFGLPGA+TGVCSQQHVPSYK +ID+FKAKGIDSVICV+VNDP
Sbjct: 61  NFATTPLKDIFKDKKVVIFGLPGAFTGVCSQQHVPSYKKQIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           Y +NGWA KLEA DAI+F+GDFDG FHKSLELDKDLS ALLGPRSQRWSAYVVDG VK L
Sbjct: 121 YVMNGWANKLEATDAIEFYGDFDGSFHKSLELDKDLSGALLGPRSQRWSAYVVDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EE PSDFKV+G DVIL QI
Sbjct: 181 NVEEVPSDFKVSGGDVILGQI 201

[Close]
BLAST of CmaCh17G002640 vs. TAIR10
Match: AT3G06050.1 (AT3G06050.1 peroxiredoxin IIF)

HSP 1 Score: 314.7 bits (805), Expect = 4.1e-86
Identity = 157/201 (78.11%), Postives = 174/201 (86.57%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MA +ILK  + SA  +   S R   SSR F+ +A GTDI SAAP VSLQKARSWDEGVSS
Sbjct: 1   MAMSILKLRNLSALRSAANSARIGVSSRGFSKLAEGTDITSAAPGVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPL DIF+GKKVVIFGLPGAYTGVCSQQHVPSYK+ ID+FKAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           + +NGWAEKL AKDAI+F+GDFDG+FHKSL LDKDLS ALLGPRS+RWSAYV DG VKA+
Sbjct: 121 FAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAV 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGA+VIL QI
Sbjct: 181 NVEEAPSDFKVTGAEVILGQI 201

[Close]
BLAST of CmaCh17G002640 vs. TAIR10
Match: AT1G65980.1 (AT1G65980.1 thioredoxin-dependent peroxidase 1)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  +  GKKV++FG+PGA+T  CS +HVP +  K +E K+KG+D +IC SVN
Sbjct: 21  NDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +       ++F  D  G +   L L+ DL    LG RS+R++  + D  V 
Sbjct: 81  DPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ AD IL  +
Sbjct: 141 VANVESG-GEFTVSSADDILKAL 162

[Close]
BLAST of CmaCh17G002640 vs. TAIR10
Match: AT1G60740.1 (AT1G60740.1 Thioredoxin superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 6.9e-25
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  I  GKKV++FG+PGA+T  CS  HVP +  K +E K+KGID +IC SVN
Sbjct: 21  NDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +  +    ++F  D  G +   L L+ DL    LG RS+R++  + +  V 
Sbjct: 81  DPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ A+ IL  +
Sbjct: 141 VANVENG-GEFTVSSAEDILKAL 162

[Close]
BLAST of CmaCh17G002640 vs. TAIR10
Match: AT1G65970.1 (AT1G65970.1 thioredoxin-dependent peroxidase 2)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24
Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = 1 

Query: 59  SSKFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVN 118
           + +  T  +  I  GKKV++FG+PGA+T  CS  HVP +  K +E K+KGID +IC SVN
Sbjct: 21  NDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVN 80

Query: 119 DPYTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVK 178
           DP+ +  W +       ++F  D  G +   L L+ DL    LG RS+R++  + +  V 
Sbjct: 81  DPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVT 140

Query: 179 ALNIEEAPSDFKVTGADVILNQI 202
             N+E    +F V+ A+ IL  +
Sbjct: 141 VANVESG-GEFTVSSAEDILKAL 162

[Close]
BLAST of CmaCh17G002640 vs. TAIR10
Match: AT3G52960.1 (AT3G52960.1 Thioredoxin superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 7.7e-24
Identity = 57/178 (32.02%), Postives = 97/178 (54.49%), Query Frame = 1 

Query: 22  RSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSSKFSTTPLKDIFEGKKVVIFGL 81
           RS A++   A++++G  +    P+ +L    S+ +  +    T  +  +  GKK ++F +
Sbjct: 62  RSFATTPVTASISVGDKL----PDSTL----SYLDPSTGDVKTVTVSSLTAGKKTILFAV 121

Query: 82  PGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDPYTLNGWAEKLEAKDAIQFFGD 141
           PGA+T  CSQ+HVP + +K  E ++KGID + C+SVND + +  W + L   D +    D
Sbjct: 122 PGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSD 181

Query: 142 FDGRFHKSLELDKDL--SVALLGPRSQRWSAYVVDGTVKALNIEEAPSDFKVTGADVI 198
            +G F   L ++ DL      LG RS+R++    DG VK LN+EE  +    +  D++
Sbjct: 182 GNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDML 231

[Close]
BLAST of CmaCh17G002640 vs. NCBI nr
Match: gi|659117372|ref|XP_008458567.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis melo])

HSP 1 Score: 369.4 bits (947), Expect = 4.0e-99
Identity = 186/201 (92.54%), Postives = 195/201 (97.01%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAILKRVSASA S+LVES+R  ASSR FAAVA+GTDIVSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASAILKRVSASAMSSLVESIRIGASSRNFAAVAVGTDIVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKDIF+GKKVVIFGLPGAYTGVCSQQHVPSY NKIDEFKAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYNNKIDEFKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLNGWAEKL+AKDAIQFFGDFDG+FHKSLELDKDLSVALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTLNGWAEKLQAKDAIQFFGDFDGKFHKSLELDKDLSVALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGADVILNQI
Sbjct: 181 NVEEAPSDFKVTGADVILNQI 201

[Close]
BLAST of CmaCh17G002640 vs. NCBI nr
Match: gi|449463086|ref|XP_004149265.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 2.6e-98
Identity = 184/201 (91.54%), Postives = 195/201 (97.01%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAILKRVSASA S+LVES+R  ASSR FAAVA+GTDIVSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASAILKRVSASAMSSLVESIRIGASSRNFAAVAVGTDIVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLK+IF+GKKVVIFGLPGAYTGVCSQQHVPSYKNKIDE KAKGIDSVICVSVNDP
Sbjct: 61  KFSTTPLKEIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDELKAKGIDSVICVSVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLNGWAEK++AKDAIQFFGDFDG+FHKSLELDKDLSVALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTLNGWAEKIQAKDAIQFFGDFDGKFHKSLELDKDLSVALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKVTGADVILNQI
Sbjct: 181 NVEEAPSDFKVTGADVILNQI 201

[Close]
BLAST of CmaCh17G002640 vs. NCBI nr
Match: gi|470121747|ref|XP_004296922.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 327.8 bits (839), Expect = 1.3e-86
Identity = 163/201 (81.09%), Postives = 181/201 (90.05%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS++LKR S SA  + V      AS RA+AAVA+GTD+VSAAP+VSLQKARSWDEGVSS
Sbjct: 1   MASSLLKRASYSAMKSAVG-----ASPRAYAAVAVGTDLVSAAPDVSLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKD+F+ KKVVIFGLPGAYTGVCSQQHVPSYKN ID+FKAKGIDSVICV+VNDP
Sbjct: 61  KFSTTPLKDLFKDKKVVIFGLPGAYTGVCSQQHVPSYKNNIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           + LNGWA+KLEAKD+I+F+GDFDG FHKSLELDKDLSVALLGPRSQRWSAYVVDG VK L
Sbjct: 121 FVLNGWADKLEAKDSIEFYGDFDGSFHKSLELDKDLSVALLGPRSQRWSAYVVDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKV+G DVIL QI
Sbjct: 181 NVEEAPSDFKVSGGDVILGQI 196

[Close]
BLAST of CmaCh17G002640 vs. NCBI nr
Match: gi|590657737|ref|XP_007034650.1| (Peroxiredoxin IIF [Theobroma cacao])

HSP 1 Score: 325.9 bits (834), Expect = 5.1e-86
Identity = 158/201 (78.61%), Postives = 182/201 (90.55%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MAS ILKRV++SA  + +ES+ + AS R++A+VA GTDIV+AAP V LQKARSWDEGVSS
Sbjct: 1   MASTILKRVTSSAIKSRLESLLTGASRRSYASVAAGTDIVNAAPGVCLQKARSWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
            FSTTPLKDIF GKKVV+FGLPGAYTGVCSQQHVPSYK  +D+FKAKGIDSVICV+VNDP
Sbjct: 61  NFSTTPLKDIFTGKKVVVFGLPGAYTGVCSQQHVPSYKKNVDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YT+N WA+KL+AKDAI+F+GDFDG FHKSLEL+KDLS ALLGPRS+RWSAYVVDG VKAL
Sbjct: 121 YTMNAWADKLQAKDAIEFYGDFDGSFHKSLELEKDLSAALLGPRSERWSAYVVDGKVKAL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           N+EEAPSDFKV+GA+VIL QI
Sbjct: 181 NVEEAPSDFKVSGAEVILEQI 201

[Close]
BLAST of CmaCh17G002640 vs. NCBI nr
Match: gi|802580347|ref|XP_012069555.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Jatropha curcas])

HSP 1 Score: 324.7 bits (831), Expect = 1.1e-85
Identity = 157/201 (78.11%), Postives = 180/201 (89.55%), Query Frame = 1 

Query: 1   MASAILKRVSASAKSTLVESMRSRASSRAFAAVAIGTDIVSAAPNVSLQKARSWDEGVSS 60
           MASAI++R   SA   +V+++R   SSR++A +A+GTD+V AAP+VSLQKAR+WDEGVSS
Sbjct: 1   MASAIIRRTCNSALKPMVDALRIGGSSRSYAKIAVGTDLVLAAPDVSLQKARTWDEGVSS 60

Query: 61  KFSTTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNKIDEFKAKGIDSVICVSVNDP 120
           KFSTTPLKDIF+GKKVVIFGLPGAYTGVCSQ HVPSYKN ID+FKAKGIDSVICV+VNDP
Sbjct: 61  KFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKFKAKGIDSVICVAVNDP 120

Query: 121 YTLNGWAEKLEAKDAIQFFGDFDGRFHKSLELDKDLSVALLGPRSQRWSAYVVDGTVKAL 180
           YTLN WAEKL+A DAI+F+GDFDGRFHKSLELDKDLSVALLGPRS+RW+AYV DG VK L
Sbjct: 121 YTLNSWAEKLQANDAIEFYGDFDGRFHKSLELDKDLSVALLGPRSERWAAYVEDGKVKVL 180

Query: 181 NIEEAPSDFKVTGADVILNQI 202
           NIEEAPSDFKV+G + IL QI
Sbjct: 181 NIEEAPSDFKVSGGEAILGQI 201

The following BLAST results are available for this feature:
BLAST of CmaCh17G002640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRX2F_ARATH7.3e-8578.11Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2[more]
PRX2F_ORYSJ1.8e-7871.64Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 S... [more]
PR2E1_ORYSJ9.1e-2736.31Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE... [more]
PRX2C_ORYSJ5.9e-2639.19Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1[more]
PRX2B_ARATH3.2e-2436.36Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1[more]
BLAST of CmaCh17G002640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB73_CUCSA1.8e-9891.54Uncharacterized protein OS=Cucumis sativus GN=Csa_6G153480 PE=4 SV=1[more]
A0A061EL45_THECC3.5e-8678.61Peroxiredoxin IIF OS=Theobroma cacao GN=TCM_020545 PE=4 SV=1[more]
A0A067KVF3_JATCU7.9e-8678.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02125 PE=4 SV=1[more]
W9QVC2_9ROSA3.9e-8577.51Peroxiredoxin-2F OS=Morus notabilis GN=L484_007342 PE=4 SV=1[more]
M5XGR6_PRUPE1.1e-8478.61Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011667mg PE=4 SV=1[more]
BLAST of CmaCh17G002640 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06050.14.1e-8678.11 peroxiredoxin IIF[more]
AT1G65980.11.8e-2536.36 thioredoxin-dependent peroxidase 1[more]
AT1G60740.16.9e-2536.36 Thioredoxin superfamily protein[more]
AT1G65970.11.5e-2436.36 thioredoxin-dependent peroxidase 2[more]
AT3G52960.17.7e-2432.02 Thioredoxin superfamily protein[more]
BLAST of CmaCh17G002640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117372|ref|XP_008458567.1|4.0e-9992.54PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis melo][more]
gi|449463086|ref|XP_004149265.1|2.6e-9891.54PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis sativus][more]
gi|470121747|ref|XP_004296922.1|1.3e-8681.09PREDICTED: peroxiredoxin-2F, mitochondrial [Fragaria vesca subsp. vesca][more]
gi|590657737|ref|XP_007034650.1|5.1e-8678.61Peroxiredoxin IIF [Theobroma cacao][more]
gi|802580347|ref|XP_012069555.1|1.1e-8578.11PREDICTED: peroxiredoxin-2F, mitochondrial [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR013740Redoxin
IPR013766Thioredoxin_domain
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0051920 peroxiredoxin activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G002640.1CmaCh17G002640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 41..201
score: 1.5
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 58..191
score: 1.2
IPR013740RedoxinPFAMPF08534Redoxincoord: 43..195
score: 1.1
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 37..201
score: 10
NoneNo IPR availablePANTHERPTHR10430PEROXIREDOXINcoord: 19..201
score: 9.1E
NoneNo IPR availablePANTHERPTHR10430:SF7PEROXIREDOXIN-2F, MITOCHONDRIALcoord: 19..201
score: 9.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G002640Cucsa.385010Cucumber (Gy14) v1cgycmaB1063
CmaCh17G002640Cla009381Watermelon (97103) v1cmawmB358
CmaCh17G002640MELO3C021410Melon (DHL92) v3.5.1cmameB313
CmaCh17G002640ClCG06G005880Watermelon (Charleston Gray)cmawcgB328
CmaCh17G002640CmoCh17G002520Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G002640Lsi09G013480Bottle gourd (USVL1VR-Ls)cmalsiB331
CmaCh17G002640Cp4.1LG17g01370Cucurbita pepo (Zucchini)cmacpeB388
CmaCh17G002640Cp4.1LG12g02180Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G002640MELO3C021410.2Melon (DHL92) v3.6.1cmamedB365
CmaCh17G002640CsaV3_6G015110Cucumber (Chinese Long) v3cmacucB0449
CmaCh17G002640Cla97C06G115390Watermelon (97103) v2cmawmbB377
CmaCh17G002640Bhi12G001609Wax gourdcmawgoB0463
CmaCh17G002640CsGy6G012750Cucumber (Gy14) v2cgybcmaB761
CmaCh17G002640Carg15920Silver-seed gourdcarcmaB0455
CmaCh17G002640Carg05444Silver-seed gourdcarcmaB0091
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G002640Silver-seed gourdcarcmaB0308
CmaCh17G002640Silver-seed gourdcarcmaB0848
CmaCh17G002640Silver-seed gourdcarcmaB1047
CmaCh17G002640Cucumber (Chinese Long) v3cmacucB0425
CmaCh17G002640Cucumber (Chinese Long) v3cmacucB0461
CmaCh17G002640Watermelon (97103) v2cmawmbB366
CmaCh17G002640Watermelon (97103) v2cmawmbB383
CmaCh17G002640Watermelon (97103) v2cmawmbB392
CmaCh17G002640Wax gourdcmawgoB0473
CmaCh17G002640Wax gourdcmawgoB0480
CmaCh17G002640Wax gourdcmawgoB0497
CmaCh17G002640Cucurbita maxima (Rimu)cmacmaB249
CmaCh17G002640Cucurbita maxima (Rimu)cmacmaB373
CmaCh17G002640Cucurbita maxima (Rimu)cmacmaB361
CmaCh17G002640Cucurbita maxima (Rimu)cmacmaB369
CmaCh17G002640Cucumber (Gy14) v1cgycmaB0714
CmaCh17G002640Cucurbita moschata (Rifu)cmacmoB350
CmaCh17G002640Cucurbita moschata (Rifu)cmacmoB362
CmaCh17G002640Cucurbita moschata (Rifu)cmacmoB365
CmaCh17G002640Cucurbita moschata (Rifu)cmacmoB373
CmaCh17G002640Wild cucumber (PI 183967)cmacpiB359
CmaCh17G002640Cucumber (Chinese Long) v2cmacuB355
CmaCh17G002640Melon (DHL92) v3.5.1cmameB342
CmaCh17G002640Watermelon (Charleston Gray)cmawcgB312
CmaCh17G002640Watermelon (Charleston Gray)cmawcgB334
CmaCh17G002640Watermelon (97103) v1cmawmB333
CmaCh17G002640Watermelon (97103) v1cmawmB341
CmaCh17G002640Watermelon (97103) v1cmawmB344
CmaCh17G002640Cucurbita pepo (Zucchini)cmacpeB373
CmaCh17G002640Cucurbita pepo (Zucchini)cmacpeB403
CmaCh17G002640Cucurbita pepo (Zucchini)cmacpeB412
CmaCh17G002640Bottle gourd (USVL1VR-Ls)cmalsiB347
CmaCh17G002640Bottle gourd (USVL1VR-Ls)cmalsiB353
CmaCh17G002640Bottle gourd (USVL1VR-Ls)cmalsiB357
CmaCh17G002640Cucumber (Gy14) v2cgybcmaB345
CmaCh17G002640Melon (DHL92) v3.6.1cmamedB378
CmaCh17G002640Melon (DHL92) v3.6.1cmamedB398